import gradio as gr import os import matplotlib.pyplot as plt import pandas as pd import numpy as np import bat_detect.utils.detector_utils as du import bat_detect.utils.audio_utils as au import bat_detect.utils.plot_utils as viz # setup the arguments args = {} args = du.get_default_bd_args() args['detection_threshold'] = 0.3 args['time_expansion_factor'] = 1 args['model_path'] = 'models/Net2DFast_UK_same.pth.tar' # load the model model, params = du.load_model(args['model_path']) df = gr.Dataframe( headers=["species", "time_in_file", "species_prob"], datatype=["str", "str", "str"], row_count=1, col_count=(3, "fixed"), ) examples = [['example_data/audio/20170701_213954-MYOMYS-LR_0_0.5.wav', 0.3], ['example_data/audio/20180530_213516-EPTSER-LR_0_0.5.wav', 0.3], ['example_data/audio/20180627_215323-RHIFER-LR_0_0.5.wav', 0.3]] def make_prediction(file_name=None, detection_threshold=0.3): if file_name is not None: audio_file = file_name else: return "You must provide an input audio file." if detection_threshold != '': args['detection_threshold'] = float(detection_threshold) results = du.process_file(audio_file, model, params, args, max_duration=5.0) clss = [aa['class'] for aa in results['pred_dict']['annotation']] st_time = [aa['start_time'] for aa in results['pred_dict']['annotation']] cls_prob = [aa['class_prob'] for aa in results['pred_dict']['annotation']] data = {'species': clss, 'time_in_file': st_time, 'species_prob': cls_prob} df = pd.DataFrame(data=data) return df descr_txt = "Demo of BatDetect2 deep learning-based bat echolocation call detection. " \ "
This model is only trained on bat species from the UK. If the input " \ "file is longer than 5 seconds, only the first 5 seconds will be processed." \ "
Check out the paper [here](https://www.biorxiv.org/content/10.1101/2022.12.14.520490v1)." gr.Interface( fn = make_prediction, inputs = [gr.Audio(source="upload", type="filepath", optional=True), gr.Dropdown([0.1, 0.2, 0.3, 0.4, 0.5, 0.6, 0.7, 0.8, 0.9])], outputs = df, theme = "huggingface", title = "BatDetect2 Demo", description = descr_txt, examples = examples, allow_flagging = 'never', ).launch()