# Plotting utils import glob import math import os import random from copy import copy from pathlib import Path import cv2 import matplotlib import matplotlib.pyplot as plt import numpy as np import torch import yaml from PIL import Image from scipy.signal import butter, filtfilt from utils.general import xywh2xyxy, xyxy2xywh from utils.metrics import fitness # Settings matplotlib.use('Agg') # for writing to files only def color_list(): # Return first 10 plt colors as (r,g,b) https://stackoverflow.com/questions/51350872/python-from-color-name-to-rgb def hex2rgb(h): return tuple(int(h[1 + i:1 + i + 2], 16) for i in (0, 2, 4)) return [hex2rgb(h) for h in plt.rcParams['axes.prop_cycle'].by_key()['color']] def hist2d(x, y, n=100): # 2d histogram used in labels.png and evolve.png xedges, yedges = np.linspace(x.min(), x.max(), n), np.linspace(y.min(), y.max(), n) hist, xedges, yedges = np.histogram2d(x, y, (xedges, yedges)) xidx = np.clip(np.digitize(x, xedges) - 1, 0, hist.shape[0] - 1) yidx = np.clip(np.digitize(y, yedges) - 1, 0, hist.shape[1] - 1) return np.log(hist[xidx, yidx]) def butter_lowpass_filtfilt(data, cutoff=1500, fs=50000, order=5): # https://stackoverflow.com/questions/28536191/how-to-filter-smooth-with-scipy-numpy def butter_lowpass(cutoff, fs, order): nyq = 0.5 * fs normal_cutoff = cutoff / nyq return butter(order, normal_cutoff, btype='low', analog=False) b, a = butter_lowpass(cutoff, fs, order=order) return filtfilt(b, a, data) # forward-backward filter def plot_one_box(x, img, color=None, label=None, line_thickness=None): # Plots one bounding box on image img tl = line_thickness or round(0.002 * (img.shape[0] + img.shape[1]) / 2) + 1 # line/font thickness color = color or [random.randint(0, 255) for _ in range(3)] c1, c2 = (int(x[0]), int(x[1])), (int(x[2]), int(x[3])) cv2.rectangle(img, c1, c2, color, thickness=tl, lineType=cv2.LINE_AA) if label: tf = max(tl - 1, 1) # font thickness t_size = cv2.getTextSize(label, 0, fontScale=tl / 3, thickness=tf)[0] c2 = c1[0] + t_size[0], c1[1] - t_size[1] - 3 cv2.rectangle(img, c1, c2, color, -1, cv2.LINE_AA) # filled cv2.putText(img, label, (c1[0], c1[1] - 2), 0, tl / 3, [225, 255, 255], thickness=tf, lineType=cv2.LINE_AA) def plot_wh_methods(): # from utils.general import *; plot_wh_methods() # Compares the two methods for width-height anchor multiplication # https://github.com/ultralytics/yolov3/issues/168 x = np.arange(-4.0, 4.0, .1) ya = np.exp(x) yb = torch.sigmoid(torch.from_numpy(x)).numpy() * 2 fig = plt.figure(figsize=(6, 3), dpi=150) plt.plot(x, ya, '.-', label='YOLO') plt.plot(x, yb ** 2, '.-', label='YOLO ^2') plt.plot(x, yb ** 1.6, '.-', label='YOLO ^1.6') plt.xlim(left=-4, right=4) plt.ylim(bottom=0, top=6) plt.xlabel('input') plt.ylabel('output') plt.grid() plt.legend() fig.tight_layout() fig.savefig('comparison.png', dpi=200) def output_to_target(output, width, height): # Convert model output to target format [batch_id, class_id, x, y, w, h, conf] if isinstance(output, torch.Tensor): output = output.cpu().numpy() targets = [] for i, o in enumerate(output): if o is not None: for pred in o: box = pred[:4] w = (box[2] - box[0]) / width h = (box[3] - box[1]) / height x = box[0] / width + w / 2 y = box[1] / height + h / 2 conf = pred[4] cls = int(pred[5]) targets.append([i, cls, x, y, w, h, conf]) return np.array(targets) def plot_images(images, targets, paths=None, fname='images.jpg', names=None, max_size=640, max_subplots=16): # Plot image grid with labels if isinstance(images, torch.Tensor): images = images.cpu().float().numpy() if isinstance(targets, torch.Tensor): targets = targets.cpu().numpy() # un-normalise if np.max(images[0]) <= 1: images *= 255 tl = 3 # line thickness tf = max(tl - 1, 1) # font thickness bs, _, h, w = images.shape # batch size, _, height, width bs = min(bs, max_subplots) # limit plot images ns = np.ceil(bs ** 0.5) # number of subplots (square) # Check if we should resize scale_factor = max_size / max(h, w) if scale_factor < 1: h = math.ceil(scale_factor * h) w = math.ceil(scale_factor * w) colors = color_list() # list of colors mosaic = np.full((int(ns * h), int(ns * w), 3), 255, dtype=np.uint8) # init for i, img in enumerate(images): if i == max_subplots: # if last batch has fewer images than we expect break block_x = int(w * (i // ns)) block_y = int(h * (i % ns)) img = img.transpose(1, 2, 0) if scale_factor < 1: img = cv2.resize(img, (w, h)) mosaic[block_y:block_y + h, block_x:block_x + w, :] = img if len(targets) > 0: image_targets = targets[targets[:, 0] == i] boxes = xywh2xyxy(image_targets[:, 2:6]).T classes = image_targets[:, 1].astype('int') labels = image_targets.shape[1] == 6 # labels if no conf column conf = None if labels else image_targets[:, 6] # check for confidence presence (label vs pred) boxes[[0, 2]] *= w boxes[[0, 2]] += block_x boxes[[1, 3]] *= h boxes[[1, 3]] += block_y for j, box in enumerate(boxes.T): cls = int(classes[j]) color = colors[cls % len(colors)] cls = names[cls] if names else cls if labels or conf[j] > 0.25: # 0.25 conf thresh label = '%s' % cls if labels else '%s %.1f' % (cls, conf[j]) plot_one_box(box, mosaic, label=label, color=color, line_thickness=tl) # Draw image filename labels if paths: label = Path(paths[i]).name[:40] # trim to 40 char t_size = cv2.getTextSize(label, 0, fontScale=tl / 3, thickness=tf)[0] cv2.putText(mosaic, label, (block_x + 5, block_y + t_size[1] + 5), 0, tl / 3, [220, 220, 220], thickness=tf, lineType=cv2.LINE_AA) # Image border cv2.rectangle(mosaic, (block_x, block_y), (block_x + w, block_y + h), (255, 255, 255), thickness=3) if fname: r = min(1280. / max(h, w) / ns, 1.0) # ratio to limit image size mosaic = cv2.resize(mosaic, (int(ns * w * r), int(ns * h * r)), interpolation=cv2.INTER_AREA) # cv2.imwrite(fname, cv2.cvtColor(mosaic, cv2.COLOR_BGR2RGB)) # cv2 save Image.fromarray(mosaic).save(fname) # PIL save return mosaic def plot_lr_scheduler(optimizer, scheduler, epochs=300, save_dir=''): # Plot LR simulating training for full epochs optimizer, scheduler = copy(optimizer), copy(scheduler) # do not modify originals y = [] for _ in range(epochs): scheduler.step() y.append(optimizer.param_groups[0]['lr']) plt.plot(y, '.-', label='LR') plt.xlabel('epoch') plt.ylabel('LR') plt.grid() plt.xlim(0, epochs) plt.ylim(0) plt.tight_layout() plt.savefig(Path(save_dir) / 'LR.png', dpi=200) def plot_test_txt(): # from utils.general import *; plot_test() # Plot test.txt histograms x = np.loadtxt('test.txt', dtype=np.float32) box = xyxy2xywh(x[:, :4]) cx, cy = box[:, 0], box[:, 1] fig, ax = plt.subplots(1, 1, figsize=(6, 6), tight_layout=True) ax.hist2d(cx, cy, bins=600, cmax=10, cmin=0) ax.set_aspect('equal') plt.savefig('hist2d.png', dpi=300) fig, ax = plt.subplots(1, 2, figsize=(12, 6), tight_layout=True) ax[0].hist(cx, bins=600) ax[1].hist(cy, bins=600) plt.savefig('hist1d.png', dpi=200) def plot_targets_txt(): # from utils.general import *; plot_targets_txt() # Plot targets.txt histograms x = np.loadtxt('targets.txt', dtype=np.float32).T s = ['x targets', 'y targets', 'width targets', 'height targets'] fig, ax = plt.subplots(2, 2, figsize=(8, 8), tight_layout=True) ax = ax.ravel() for i in range(4): ax[i].hist(x[i], bins=100, label='%.3g +/- %.3g' % (x[i].mean(), x[i].std())) ax[i].legend() ax[i].set_title(s[i]) plt.savefig('targets.jpg', dpi=200) def plot_study_txt(f='study.txt', x=None): # from utils.general import *; plot_study_txt() # Plot study.txt generated by test.py fig, ax = plt.subplots(2, 4, figsize=(10, 6), tight_layout=True) ax = ax.ravel() fig2, ax2 = plt.subplots(1, 1, figsize=(8, 4), tight_layout=True) for f in ['study/study_coco_yolo%s.txt' % x for x in ['s', 'm', 'l', 'x']]: y = np.loadtxt(f, dtype=np.float32, usecols=[0, 1, 2, 3, 7, 8, 9], ndmin=2).T x = np.arange(y.shape[1]) if x is None else np.array(x) s = ['P', 'R', 'mAP@.5', 'mAP@.5:.95', 't_inference (ms/img)', 't_NMS (ms/img)', 't_total (ms/img)'] for i in range(7): ax[i].plot(x, y[i], '.-', linewidth=2, markersize=8) ax[i].set_title(s[i]) j = y[3].argmax() + 1 ax2.plot(y[6, :j], y[3, :j] * 1E2, '.-', linewidth=2, markersize=8, label=Path(f).stem.replace('study_coco_', '').replace('yolo', 'YOLO')) ax2.plot(1E3 / np.array([209, 140, 97, 58, 35, 18]), [34.6, 40.5, 43.0, 47.5, 49.7, 51.5], 'k.-', linewidth=2, markersize=8, alpha=.25, label='EfficientDet') ax2.grid() ax2.set_xlim(0, 30) ax2.set_ylim(28, 50) ax2.set_yticks(np.arange(30, 55, 5)) ax2.set_xlabel('GPU Speed (ms/img)') ax2.set_ylabel('COCO AP val') ax2.legend(loc='lower right') plt.savefig('study_mAP_latency.png', dpi=300) plt.savefig(f.replace('.txt', '.png'), dpi=300) def plot_labels(labels, save_dir=''): # plot dataset labels c, b = labels[:, 0], labels[:, 1:].transpose() # classes, boxes nc = int(c.max() + 1) # number of classes fig, ax = plt.subplots(2, 2, figsize=(8, 8), tight_layout=True) ax = ax.ravel() ax[0].hist(c, bins=np.linspace(0, nc, nc + 1) - 0.5, rwidth=0.8) ax[0].set_xlabel('classes') ax[1].scatter(b[0], b[1], c=hist2d(b[0], b[1], 90), cmap='jet') ax[1].set_xlabel('x') ax[1].set_ylabel('y') ax[2].scatter(b[2], b[3], c=hist2d(b[2], b[3], 90), cmap='jet') ax[2].set_xlabel('width') ax[2].set_ylabel('height') plt.savefig(Path(save_dir) / 'labels.png', dpi=200) plt.close() # seaborn correlogram try: import seaborn as sns import pandas as pd x = pd.DataFrame(b.transpose(), columns=['x', 'y', 'width', 'height']) sns.pairplot(x, corner=True, diag_kind='hist', kind='scatter', markers='o', plot_kws=dict(s=3, edgecolor=None, linewidth=1, alpha=0.02), diag_kws=dict(bins=50)) plt.savefig(Path(save_dir) / 'labels_correlogram.png', dpi=200) plt.close() except Exception as e: pass def plot_evolution(yaml_file='data/hyp.finetune.yaml'): # from utils.general import *; plot_evolution() # Plot hyperparameter evolution results in evolve.txt with open(yaml_file) as f: hyp = yaml.load(f, Loader=yaml.FullLoader) x = np.loadtxt('evolve.txt', ndmin=2) f = fitness(x) # weights = (f - f.min()) ** 2 # for weighted results plt.figure(figsize=(10, 12), tight_layout=True) matplotlib.rc('font', **{'size': 8}) for i, (k, v) in enumerate(hyp.items()): y = x[:, i + 7] # mu = (y * weights).sum() / weights.sum() # best weighted result mu = y[f.argmax()] # best single result plt.subplot(6, 5, i + 1) plt.scatter(y, f, c=hist2d(y, f, 20), cmap='viridis', alpha=.8, edgecolors='none') plt.plot(mu, f.max(), 'k+', markersize=15) plt.title('%s = %.3g' % (k, mu), fontdict={'size': 9}) # limit to 40 characters if i % 5 != 0: plt.yticks([]) print('%15s: %.3g' % (k, mu)) plt.savefig('evolve.png', dpi=200) print('\nPlot saved as evolve.png') def plot_results_overlay(start=0, stop=0): # from utils.general import *; plot_results_overlay() # Plot training 'results*.txt', overlaying train and val losses s = ['train', 'train', 'train', 'Precision', 'mAP@0.5', 'val', 'val', 'val', 'Recall', 'mAP@0.5:0.95'] # legends t = ['Box', 'Objectness', 'Classification', 'P-R', 'mAP-F1'] # titles for f in sorted(glob.glob('results*.txt') + glob.glob('../../Downloads/results*.txt')): results = np.loadtxt(f, usecols=[2, 3, 4, 8, 9, 12, 13, 14, 10, 11], ndmin=2).T n = results.shape[1] # number of rows x = range(start, min(stop, n) if stop else n) fig, ax = plt.subplots(1, 5, figsize=(14, 3.5), tight_layout=True) ax = ax.ravel() for i in range(5): for j in [i, i + 5]: y = results[j, x] ax[i].plot(x, y, marker='.', label=s[j]) # y_smooth = butter_lowpass_filtfilt(y) # ax[i].plot(x, np.gradient(y_smooth), marker='.', label=s[j]) ax[i].set_title(t[i]) ax[i].legend() ax[i].set_ylabel(f) if i == 0 else None # add filename fig.savefig(f.replace('.txt', '.png'), dpi=200) def plot_results(start=0, stop=0, bucket='', id=(), labels=(), save_dir=''): # from utils.general import *; plot_results(save_dir='runs/train/exp0') # Plot training 'results*.txt' fig, ax = plt.subplots(2, 5, figsize=(12, 6)) ax = ax.ravel() s = ['Box', 'Objectness', 'Classification', 'Precision', 'Recall', 'val Box', 'val Objectness', 'val Classification', 'mAP@0.5', 'mAP@0.5:0.95'] if bucket: # os.system('rm -rf storage.googleapis.com') # files = ['https://storage.googleapis.com/%s/results%g.txt' % (bucket, x) for x in id] files = ['%g.txt' % x for x in id] c = ('gsutil cp ' + '%s ' * len(files) + '.') % tuple('gs://%s/%g.txt' % (bucket, x) for x in id) os.system(c) else: files = glob.glob(str(Path(save_dir) / '*.txt')) + glob.glob('../../Downloads/results*.txt') assert len(files), 'No results.txt files found in %s, nothing to plot.' % os.path.abspath(save_dir) for fi, f in enumerate(files): try: results = np.loadtxt(f, usecols=[2, 3, 4, 8, 9, 12, 13, 14, 10, 11], ndmin=2).T n = results.shape[1] # number of rows x = range(start, min(stop, n) if stop else n) for i in range(10): y = results[i, x] if i in [0, 1, 2, 5, 6, 7]: y[y == 0] = np.nan # don't show zero loss values # y /= y[0] # normalize label = labels[fi] if len(labels) else Path(f).stem ax[i].plot(x, y, marker='.', label=label, linewidth=1, markersize=6) ax[i].set_title(s[i]) # if i in [5, 6, 7]: # share train and val loss y axes # ax[i].get_shared_y_axes().join(ax[i], ax[i - 5]) except Exception as e: print('Warning: Plotting error for %s; %s' % (f, e)) fig.tight_layout() ax[1].legend() fig.savefig(Path(save_dir) / 'results.png', dpi=200)