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filter on repetition removal
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# Run with: streamlit run visualization.py
import streamlit as st
import os
import base64
import json
import pandas as pd
pd.options.mode.chained_assignment = None
import numpy as np
import matplotlib.pyplot as plt
class Visualization:
def __init__(
self,
path_instructions,
path_data,
lang,
num_docs,
num_docs_for_words,
max_len_text_display,
):
self.path_instructions = path_instructions
self.path_data = path_data
self.lang = lang
self.num_docs = num_docs
self.num_docs_for_words = num_docs_for_words
self.max_len_text_display = max_len_text_display
def preamble(self):
st.markdown(
"Before diving into this demo, you might want to take a look at how the filtering pipeline looks like in more detail."
)
def get_binary_file_downloader_html(bin_file, file_label="File"):
with open(bin_file, "rb") as f:
data = f.read()
bin_str = base64.b64encode(data).decode()
href = f'<a href="data:application/octet-stream;base64,{bin_str}" download="{os.path.basename(bin_file)}">{file_label}</a>'
return href
st.markdown(
get_binary_file_downloader_html(
self.path_instructions,
"Download the explanation of the filtering pipeline as pdf",
),
unsafe_allow_html=True,
)
def open_data(self):
with open(self.path_data) as json_file:
data = json.load(json_file)
self.num_docs = min(self.num_docs, len(data))
self.num_docs_for_words = min(self.num_docs_for_words, len(data))
if "words" in data[0]:
words = [doc["words"] for doc in data[: self.num_docs_for_words]]
words = [word for doc in words for word in doc]
self.words = pd.DataFrame(words)
else:
self.words = None
docs = data[: self.num_docs]
for doc in docs:
if not (self.words is None):
del doc["words"]
if len(doc["text"]) > self.max_len_text_display:
doc["text"] = (
doc["text"][: self.max_len_text_display]
+ " [...] [THIS LONG TEXT HAS BEEN TRUNCATED FOR DISPLAY REASONS]"
)
self.docs_checkpoint = pd.DataFrame(docs)
self.docs = self.docs_checkpoint
def set_title(self):
st.title(f"{self.num_docs} {self.lang} documents with their stats.")
def filtering_of_docs(self):
st.sidebar.subheader("Parameters of the filtering on documents")
def set_sliders():
columns = list(self.docs)
keys = []
conds = {}
def get_cond(key, cutoff, max_cutoff):
if max_cutoff:
return self.docs[key] <= cutoff
return self.docs[key] >= cutoff
def print_discared_by_cond(cond):
st.sidebar.caption(
f"{(len(cond) - np.sum(1*cond)) / len(cond) * 100:.2f}% of the total is discarded with this filter."
)
st.sidebar.caption("---------")
if "number_words" in columns:
cutoff_def = "If the number of words of a document is lower than this number, the document is removed."
max_nb_words = int(np.max(self.docs["number_words"])) + 1
cutoff_min_number_words = st.sidebar.slider(
cutoff_def, 0, min(max_nb_words, 500), 0
)
new_key = ("number_words", cutoff_min_number_words, False)
keys.append(new_key)
cond_1 = get_cond(new_key[0], new_key[1], new_key[2])
print_discared_by_cond(cond_1)
cutoff_def = "If the number of words of a document is higher than this number, the document is removed."
cutoff_max_number_words = st.sidebar.slider(
cutoff_def, 0, max_nb_words, max_nb_words
)
new_key = ("number_words", cutoff_max_number_words, True)
keys.append(new_key)
cond_2 = get_cond(new_key[0], new_key[1], new_key[2])
print_discared_by_cond(cond_2)
conds["number_words"] = [cond_1, cond_2]
if "repetitions_ratio" in columns:
val_repetitions_lengths = list(
self.docs["repetitions_ratio"].iloc[0].keys()
)
default_index = (
val_repetitions_lengths.index("10")
if "10" in val_repetitions_lengths
else 0
)
label_selectbox = (
"Length of the repetitions (that will determine the repetitions ratio). "
"Choosing a higher or lower number does not mean that the filtering "
"is stronger or weaker. Be careful, choosing a low number (below 5 for languages like English) "
"tends to associate a high repetitions ratio to very long documents (like book chapters), but with "
"few or no repetitions, simply because their length gives them more diversity, and we do "
"not want to discard such documents."
)
repetitions_length = st.sidebar.selectbox(
label=label_selectbox,
options=val_repetitions_lengths,
index=default_index,
)
self.docs = self.docs_checkpoint
for i in range(len(self.docs["repetitions_ratio"])):
self.docs["repetitions_ratio"].iloc[i] = self.docs["repetitions_ratio"].iloc[i][repetitions_length]
cutoff_def = "If the repetitions ratio of a document is higher than this number, the document is removed."
cutoff_repetitions_ratio = st.sidebar.slider(
cutoff_def, 0.0, 1.0, 1.0, step=0.01
)
new_key = (
"repetitions_ratio",
cutoff_repetitions_ratio,
True,
)
keys.append(new_key)
cond = get_cond(new_key[0], new_key[1], new_key[2])
print_discared_by_cond(cond)
conds["repetitions_ratio"] = [cond]
if "special_characters_ratio" in columns:
cutoff_def = "If the special characters ratio of a document is higher than this number, the document is removed."
cutoff_special_characters_ratio = st.sidebar.slider(
cutoff_def, 0.0, 1.0, 1.0, step=0.01
)
new_key = (
"special_characters_ratio",
cutoff_special_characters_ratio,
True,
)
keys.append(new_key)
cond = get_cond(new_key[0], new_key[1], new_key[2])
print_discared_by_cond(cond)
conds["special_characters_ratio"] = [cond]
if "stopwords_ratio" in columns:
cutoff_def = "If the stop words ratio of a document is lower than this number, the document is removed."
cutoff_stopwords_ratio = st.sidebar.slider(
cutoff_def, 0.0, 1.0, 0.0, step=0.01
)
new_key = ("stopwords_ratio", cutoff_stopwords_ratio, False)
keys.append(new_key)
cond = get_cond(new_key[0], new_key[1], new_key[2])
print_discared_by_cond(cond)
conds["stopwords_ratio"] = [cond]
if "badwords_ratio" in columns:
cutoff_def = "If the bad words ratio of a document is higher than this number, the document is removed."
cutoff_badwords_ratio = st.sidebar.slider(
cutoff_def, 0.0, 1.0, 1.0, step=0.01
)
new_key = ("badwords_ratio", cutoff_badwords_ratio, True)
keys.append(new_key)
cond = get_cond(new_key[0], new_key[1], new_key[2])
print_discared_by_cond(cond)
conds["badwords_ratio"] = [cond]
if "lang_id_score" in columns:
cutoff_def = "If the confidence score for the language identification prediction of a document is lower than this number, the document is removed."
cutoff_lang_id_score = st.sidebar.slider(
cutoff_def, 0.0, 1.0, 0.0, step=0.01
)
new_key = ("lang_id_score", cutoff_lang_id_score, False)
keys.append(new_key)
cond = get_cond(new_key[0], new_key[1], new_key[2])
print_discared_by_cond(cond)
conds["lang_id_score"] = [cond]
if "perplexity_score" in columns:
cutoff_def = "If the perplexity score of a document is higher than this number, the document is removed."
max_pp = int(np.max(self.docs["perplexity_score"])) + 1
cutoff_perplexity_score = st.sidebar.slider(
cutoff_def, 0, max_pp, max_pp
)
new_key = ("perplexity_score", cutoff_perplexity_score, True)
keys.append(new_key)
cond = get_cond(new_key[0], new_key[1], new_key[2])
print_discared_by_cond(cond)
conds["perplexity_score"] = [cond]
return keys, conds
self.keys, conds = set_sliders()
all_conds = [subcond for cond in list(conds.values()) for subcond in cond]
all_conds = np.all(all_conds, axis=0)
st.header("Filtering on documents")
def display_dataset(cond, description):
displayed_docs = self.docs.loc[cond]
st.subheader(
f"{description}: {len(displayed_docs)} docs ({len(displayed_docs) / self.num_docs * 100:.2f}%)"
)
st.markdown(
"Click on a column to sort by it, place the cursor on the text to display it."
)
st.dataframe(displayed_docs)
display_dataset(np.invert(all_conds), "Discarded documents")
# st.subheader("Display discarded documents by filter")
display_discarded_documents_by_filter = st.checkbox(
"Display discarded documents by filter"
)
if display_discarded_documents_by_filter:
columns = list(self.docs)
if "number_words" in columns:
cond_filter = np.invert(np.all(conds["number_words"], axis=0))
display_dataset(
cond_filter,
"Discarded documents for the filter on the number of words",
)
if "repetitions_ratio" in columns:
cond_filter = np.invert(np.all(conds["repetitions_ratio"], axis=0))
display_dataset(
cond_filter,
"Discarded documents for the filter on the repetitions ratio",
)
if "special_characters_ratio" in columns:
cond_filter = np.invert(
np.all(conds["special_characters_ratio"], axis=0)
)
display_dataset(
cond_filter,
"Discarded documents for the filter on the special characters ratio",
)
if "stopwords_ratio" in columns:
cond_filter = np.invert(np.all(conds["stopwords_ratio"], axis=0))
display_dataset(
cond_filter,
"Discarded documents for the filter on the stop words ratio",
)
if "badwords_ratio" in columns:
cond_filter = np.invert(np.all(conds["badwords_ratio"], axis=0))
display_dataset(
cond_filter,
"Discarded documents for the filter on the bad words ratio",
)
if "lang_id_score" in columns:
cond_filter = np.invert(np.all(conds["lang_id_score"], axis=0))
display_dataset(
cond_filter,
"Discarded documents for the filter on the language identification confidence score",
)
if "perplexity_score" in columns:
cond_filter = np.invert(np.all(conds["perplexity_score"], axis=0))
display_dataset(
cond_filter,
"Discarded documents for the filter on the perplexity score",
)
display_dataset(all_conds, "Retained documents")
def filtering_of_words(self):
if not (self.words is None):
st.sidebar.subheader("Parameter of the filtering on words")
cutoff_def = "If the length of a word is higher than this number, the word is removed."
max_len_word = min(int(np.max(self.words["len_word"])) + 1, 200)
cutoff_word = st.sidebar.slider(cutoff_def, 0, max_len_word, max_len_word)
incorrect_substrings = st.sidebar.checkbox(
"Remove words with incorrect substrings."
)
cond_words = self.words["len_word"] <= cutoff_word
if incorrect_substrings:
cond_words = cond_words & np.invert(self.words["incorrect_substring"])
st.header("Filtering on words")
st.markdown(
f"Since the number of words is way larger than the number of documents, "
f"we consider in this section words for the first {self.num_docs_for_words} documents only."
)
discarded_words = self.words.loc[np.invert(cond_words)]
st.subheader(
f"Discarded words: {len(discarded_words)} words ({len(discarded_words) / len(self.words) * 100:.2f}%)"
)
st.markdown(
"Click on a column to sort by it, place the cursor on the text to display it."
)
st.dataframe(discarded_words)
retained_words = self.words.loc[cond_words]
st.subheader(
f"Retained words: {len(retained_words)} words ({len(retained_words) / len(self.words) * 100:.2f}%)"
)
st.markdown(
"Click on a column to sort by it, place the cursor on the text to display it."
)
st.dataframe(retained_words)
def plot_distributions_filtering_parameters(self):
st.header("Distributions of the filtering parameters")
display_distributions = st.checkbox("Display distributions")
if display_distributions:
def plot_hist(dataframe, key, num_bins=50):
st.subheader(" ".join(key.split("_")))
hist_values = dataframe[key].values
max_range = np.max(hist_values)
hist_values = np.histogram(
hist_values, bins=num_bins, range=(0, max_range)
)[0]
st.bar_chart(hist_values)
st.markdown(f"Each bin is of size: {max_range/num_bins}.")
for key in list({el[0]: None for el in self.keys}):
plot_hist(self.docs, key)
if not (self.words is None):
plot_hist(self.words, "len_word")
def plot_zipf_law(self):
if not (self.words is None):
st.header("Zipf's Law")
display_zipf_law = st.checkbox("Display Zipf's Law")
if display_zipf_law:
freq_words = {}
for _, row in self.words.iterrows():
freq_words[row["word"]] = freq_words.get(row["word"], 0) + 1
freq_words = np.array(list(freq_words.values()))
freq_words = -np.sort(-freq_words)
fig, ax = plt.subplots()
ax.loglog(freq_words)
ax.set_title("Zipf's Law")
ax.set_xlabel("$i$-th most frequent word")
ax.set_ylabel("frequency in the documents")
st.pyplot(fig)
def download_data(self):
st.header("Download data")
with open(self.path_data) as json_file:
btn = st.download_button(
label="Download data as json",
data=json_file,
file_name="data.json",
)
def visualization(self):
self.preamble()
self.open_data()
self.set_title()
self.filtering_of_docs()
self.filtering_of_words()
self.plot_distributions_filtering_parameters()
#self.plot_zipf_law()
self.download_data()
path_instructions = "./explanation_filtering_pipeline.pdf"
path_data = "./en_examples_with_stats.json"
lang = "English"
num_docs = 5000
num_docs_for_words = 500
max_len_text_display = 10000
visualization = Visualization(
path_instructions,
path_data,
lang,
num_docs,
num_docs_for_words,
max_len_text_display,
)
visualization.visualization()