# Copyright 2020 Division of Medical Image Computing, German Cancer Research Center (DKFZ), Heidelberg, Germany # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. # You may obtain a copy of the License at # # http://www.apache.org/licenses/LICENSE-2.0 # # Unless required by applicable law or agreed to in writing, software # distributed under the License is distributed on an "AS IS" BASIS, # WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. # See the License for the specific language governing permissions and # limitations under the License. import torch def load_pretrained_weights(network, fname, verbose=False): """ THIS DOES NOT TRANSFER SEGMENTATION HEADS! """ saved_model = torch.load(fname) pretrained_dict = saved_model['state_dict'] new_state_dict = {} # if state dict comes form nn.DataParallel but we use non-parallel model here then the state dict keys do not # match. Use heuristic to make it match for k, value in pretrained_dict.items(): key = k # remove module. prefix from DDP models if key.startswith('module.'): key = key[7:] new_state_dict[key] = value pretrained_dict = new_state_dict model_dict = network.state_dict() ok = True for key, _ in model_dict.items(): if ('conv_blocks' in key): if (key in pretrained_dict) and (model_dict[key].shape == pretrained_dict[key].shape): continue else: ok = False break # filter unnecessary keys if ok: pretrained_dict = {k: v for k, v in pretrained_dict.items() if (k in model_dict) and (model_dict[k].shape == pretrained_dict[k].shape)} # 2. overwrite entries in the existing state dict model_dict.update(pretrained_dict) print("################### Loading pretrained weights from file ", fname, '###################') if verbose: print("Below is the list of overlapping blocks in pretrained model and nnUNet architecture:") for key, _ in pretrained_dict.items(): print(key) print("################### Done ###################") network.load_state_dict(model_dict) else: raise RuntimeError("Pretrained weights are not compatible with the current network architecture")