# # Pyserini: Python interface to the Anserini IR toolkit built on Lucene # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. # You may obtain a copy of the License at # # http://www.apache.org/licenses/LICENSE-2.0 # # Unless required by applicable law or agreed to in writing, software # distributed under the License is distributed on an "AS IS" BASIS, # WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. # See the License for the specific language governing permissions and # limitations under the License. # """Filter a TREC run file to retain only docids that appear on a list of valid docids (commonly known as a whitelist). The whitelist is a file with a docid on each line.""" import argparse from collections import defaultdict def read_file(file): docids = set() with open(file) as f: for line in f: cols = line.split() if len(cols) > 0: docids.add(cols[0]) return docids def main(): parser = argparse.ArgumentParser(description=__doc__, formatter_class=lambda prog: argparse.HelpFormatter(prog, width=100)) parser.add_argument('--whitelist', metavar='FILE', type=str, help='Whitelist (one docid per line).', required=True) parser.add_argument('--input', metavar='FILE', type=str, help='Input run.', required=True) parser.add_argument('--output', metavar='FILE', type=str, help='Output run.', required=True) parser.add_argument('--runtag', metavar='STRING', type=str, default=None, help='Runtag.') parser.add_argument('--k', metavar='NUM', type=int, default=1000, help='Number of hits to retain per topic.') args = parser.parse_args() docids = read_file(args.whitelist) print(f'Read {len(docids)} docids from {args.whitelist}') counts = defaultdict(int) prev_score = None check_score = True with open(args.output, 'w') as output_f: with open(args.input) as input_f: for line in input_f: cols = line.split() qid = cols[0] docid = cols[2] score = float(cols[4]) tag = cols[5] if args.runtag: tag = args.runtag if counts[qid] >= args.k: if check_score: if score <= prev_score: print(f'Warning: scores of {qid} do not strictly decrease at {docid}') check_score = False continue else: continue if docid in docids: counts[qid] += 1 prev_score = float(cols[4]) check_score = True output_f.write(f'{qid} Q0 {docid} {counts[qid]} {score} {tag}\n') if __name__ == '__main__': main()