# # Pyserini: Reproducible IR research with sparse and dense representations # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. # You may obtain a copy of the License at # # http://www.apache.org/licenses/LICENSE-2.0 # # Unless required by applicable law or agreed to in writing, software # distributed under the License is distributed on an "AS IS" BASIS, # WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. # See the License for the specific language governing permissions and # limitations under the License. # import json import os import re import shutil import unittest from random import randint from pyserini.util import download_url, download_prebuilt_index class TestSearchIntegration(unittest.TestCase): def setUp(self): curdir = os.getcwd() if curdir.endswith('clprf'): self.pyserini_root = '../..' else: self.pyserini_root = '.' self.tmp = f'{self.pyserini_root}/integrations/tmp{randint(0, 10000)}' # In the rare event there's a collision if os.path.exists(self.tmp): shutil.rmtree(self.tmp) os.mkdir(self.tmp) os.mkdir(f'{self.tmp}/runs') self.round3_runs = { 'https://raw.githubusercontent.com/castorini/anserini/master/src/main/resources/topics-and-qrels/qrels.covid-round3-cumulative.txt': 'dfccc32efd58a8284ae411e5c6b27ce9', } download_url('https://ir.nist.gov/covidSubmit/archive/round3/covidex.r3.monot5', f'{self.tmp}/runs') for url in self.round3_runs: print(f'Verifying stored run at {url}...') filename = url.split('/')[-1] filename = re.sub('\\?dl=1$', '', filename) # Remove the Dropbox 'force download' parameter download_url(url, self.tmp, md5=self.round3_runs[url], force=True) self.assertTrue(os.path.exists(os.path.join(self.tmp, filename))) def test_bm25(self): tmp_folder_name = self.tmp.split('/')[-1] prebuilt_index_path = download_prebuilt_index('trec-covid-r3-abstract') os.system(f'python {self.pyserini_root}/scripts/classifier_prf/rank_trec_covid.py \ -alpha 0.5 \ -clf lr \ -vectorizer tfidf \ -new_qrels {self.pyserini_root}/tools/topics-and-qrels/qrels.covid-round3.txt \ -base {self.tmp}/runs/covidex.r3.monot5 \ -tmp_base {tmp_folder_name} \ -qrels {self.pyserini_root}/tools/topics-and-qrels/qrels.covid-round2-cumulative.txt \ -index {prebuilt_index_path} \ -tag covidex.r3.t5.lr \ -output {self.tmp}/output.json') with open(f'{self.tmp}/output.json') as json_file: data = json.load(json_file) self.assertEqual("0.3333", data['map']) self.assertEqual("0.6916", data['ndcg']) def tearDown(self): shutil.rmtree(self.tmp) if __name__ == '__main__': unittest.main()