{ "cells": [ { "cell_type": "markdown", "metadata": { "colab_type": "text", "id": "view-in-github" }, "source": [ "\"Open" ] }, { "cell_type": "markdown", "metadata": {}, "source": [ "# Roboflow 100 - Blood Cell Dataset (BCCD)" ] }, { "cell_type": "code", "execution_count": 1, "metadata": { "colab": { "base_uri": "https://localhost:8080/" }, "id": "JFMi8nxJsqct", "outputId": "ba0118ff-f3b4-42a6-a182-3edd52f369dd" }, "outputs": [ { "name": "stdout", "output_type": "stream", "text": [ "\u001b[?25l \u001b[90m━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━\u001b[0m \u001b[32m0.0/76.7 kB\u001b[0m \u001b[31m?\u001b[0m eta \u001b[36m-:--:--\u001b[0m\r\u001b[2K \u001b[91m━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━\u001b[0m\u001b[90m╺\u001b[0m\u001b[90m━━\u001b[0m \u001b[32m71.7/76.7 kB\u001b[0m \u001b[31m3.0 MB/s\u001b[0m eta \u001b[36m0:00:01\u001b[0m\r\u001b[2K \u001b[90m━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━\u001b[0m \u001b[32m76.7/76.7 kB\u001b[0m \u001b[31m1.9 MB/s\u001b[0m eta \u001b[36m0:00:00\u001b[0m\n", "\u001b[2K \u001b[90m━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━\u001b[0m \u001b[32m547.8/547.8 kB\u001b[0m \u001b[31m13.0 MB/s\u001b[0m eta \u001b[36m0:00:00\u001b[0m\n", "\u001b[2K \u001b[90m━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━\u001b[0m \u001b[32m178.7/178.7 kB\u001b[0m \u001b[31m17.2 MB/s\u001b[0m eta \u001b[36m0:00:00\u001b[0m\n", "\u001b[2K \u001b[90m━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━\u001b[0m \u001b[32m54.5/54.5 kB\u001b[0m \u001b[31m4.1 MB/s\u001b[0m eta \u001b[36m0:00:00\u001b[0m\n", "\u001b[2K \u001b[90m━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━\u001b[0m \u001b[32m39.9/39.9 MB\u001b[0m \u001b[31m40.4 MB/s\u001b[0m eta \u001b[36m0:00:00\u001b[0m\n", "\u001b[2K \u001b[90m━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━\u001b[0m \u001b[32m116.3/116.3 kB\u001b[0m \u001b[31m9.1 MB/s\u001b[0m eta \u001b[36m0:00:00\u001b[0m\n", "\u001b[2K \u001b[90m━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━\u001b[0m \u001b[32m64.9/64.9 kB\u001b[0m \u001b[31m5.2 MB/s\u001b[0m eta \u001b[36m0:00:00\u001b[0m\n", "\u001b[2K \u001b[90m━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━\u001b[0m \u001b[32m194.1/194.1 kB\u001b[0m \u001b[31m8.8 MB/s\u001b[0m eta \u001b[36m0:00:00\u001b[0m\n", "\u001b[2K \u001b[90m━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━\u001b[0m \u001b[32m134.8/134.8 kB\u001b[0m \u001b[31m10.6 MB/s\u001b[0m eta \u001b[36m0:00:00\u001b[0m\n", "\u001b[?25h\u001b[31mERROR: pip's dependency resolver does not currently take into account all the packages that are installed. This behaviour is the source of the following dependency conflicts.\n", "cudf-cu12 24.4.1 requires pyarrow<15.0.0a0,>=14.0.1, but you have pyarrow 17.0.0 which is incompatible.\n", "google-colab 1.0.0 requires requests==2.31.0, but you have requests 2.32.3 which is incompatible.\n", "ibis-framework 8.0.0 requires pyarrow<16,>=2, but you have pyarrow 17.0.0 which is incompatible.\u001b[0m\u001b[31m\n", "\u001b[0m" ] } ], "source": [ "!pip install -q roboflow datasets datasets[vision]" ] }, { "cell_type": "markdown", "metadata": {}, "source": [ "## Setup Roboflow connection parameters and configuration BCCD dataset" ] }, { "cell_type": "code", "execution_count": 2, "metadata": { "colab": { "base_uri": "https://localhost:8080/" }, "id": "cWyUczWctate", "outputId": "44c0f011-b3d5-401f-ca39-375c84858499" }, "outputs": [ { "name": "stdout", "output_type": "stream", "text": [ "loading Roboflow workspace...\n", "loading Roboflow project...\n" ] }, { "name": "stderr", "output_type": "stream", "text": [ "Downloading Dataset Version Zip in /content/coco/ to coco:: 100%|██████████| 9042/9042 [00:01<00:00, 5811.25it/s] " ] }, { "name": "stdout", "output_type": "stream", "text": [ "\n" ] }, { "name": "stderr", "output_type": "stream", "text": [ "\n", "Extracting Dataset Version Zip to /content/coco/ in coco:: 100%|██████████| 372/372 [00:00<00:00, 6072.69it/s]\n", "Downloading Dataset Version Zip in /content/paligemma/ to paligemma:: 100%|██████████| 7541/7541 [00:01<00:00, 5042.83it/s] " ] }, { "name": "stdout", "output_type": "stream", "text": [ "\n" ] }, { "name": "stderr", "output_type": "stream", "text": [ "\n", "Extracting Dataset Version Zip to /content/paligemma/ in paligemma:: 100%|██████████| 370/370 [00:00<00:00, 5702.03it/s]\n", "Downloading Dataset Version Zip in /content/florence2_od/ to florence2-od:: 100%|██████████| 7538/7538 [00:01<00:00, 5536.18it/s] " ] }, { "name": "stdout", "output_type": "stream", "text": [ "\n" ] }, { "name": "stderr", "output_type": "stream", "text": [ "\n", "Extracting Dataset Version Zip to /content/florence2_od/ in florence2-od:: 100%|██████████| 372/372 [00:00<00:00, 4983.98it/s]\n" ] } ], "source": [ "from google.colab import userdata\n", "from roboflow import Roboflow\n", "\n", "ROBOFLOW_API_KEY = userdata.get('ROBOFLOW_API_KEY')\n", "rf = Roboflow(api_key=ROBOFLOW_API_KEY)\n", "\n", "project = rf.workspace(\"roboflow-100\").project(\"bccd-ouzjz\")\n", "version = project.version(2)" ] }, { "cell_type": "markdown", "metadata": {}, "source": [ "### select dataset model formats - for models you want to finetune" ] }, { "cell_type": "code", "execution_count": null, "metadata": {}, "outputs": [], "source": [ "dataset = version.download(model_format=\"paligemma\", location=\"/content/paligemma/\", overwrite=True)\n", "dataset = version.download(model_format=\"florence2-od\", location=\"/content/florence2_od/\", overwrite=True)" ] }, { "cell_type": "markdown", "metadata": {}, "source": [ "### validation" ] }, { "cell_type": "code", "execution_count": 3, "metadata": { "colab": { "base_uri": "https://localhost:8080/" }, "id": "rtzP2xV9sV52", "outputId": "6dc6f65b-ac6b-4b85-f452-7d8cc648f562" }, "outputs": [ { "name": "stdout", "output_type": "stream", "text": [ "-rw-r--r-- 1 root root 1122675 Jul 23 03:30 coco/train/_annotations.coco.json\n", "-rw-r--r-- 1 root root 153472 Jul 23 03:30 coco/test/_annotations.coco.json\n", "-rw-r--r-- 1 root root 314313 Jul 23 03:30 coco/valid/_annotations.coco.json\n", "-rw-r--r-- 1 root root 21993 Jul 23 03:30 florence2_od/test/annotations.jsonl\n", "-rw-r--r-- 1 root root 160106 Jul 23 03:30 florence2_od/train/annotations.jsonl\n", "-rw-r--r-- 1 root root 45081 Jul 23 03:30 florence2_od/valid/annotations.jsonl\n", "-rw-r--r-- 1 root root 24860 Jul 23 03:30 paligemma/dataset/_annotations.test.jsonl\n", "-rw-r--r-- 1 root root 180953 Jul 23 03:30 paligemma/dataset/_annotations.train.jsonl\n", "-rw-r--r-- 1 root root 50942 Jul 23 03:30 paligemma/dataset/_annotations.valid.jsonl\n" ] } ], "source": [ "# for each of the dataset model formats (florence2_od / paligemma)\n", "# do a \"ls -l\" of the json files\n", "!ls -l florence2_od/test/*.json*\n", "!ls -l florence2_od/train/*.json*\n", "!ls -l florence2_od/valid/*.json*\n", "\n", "!ls -l paligemma/dataset/*.json*" ] }, { "cell_type": "code", "execution_count": 4, "metadata": { "colab": { "base_uri": "https://localhost:8080/" }, "id": "oSgcUrNPu6Xq", "outputId": "6571f3cf-dd52-4c88-e3a0-de95432caaca" }, "outputs": [ { "name": "stdout", "output_type": "stream", "text": [ "/content/coco/train: 255 files\n", "/content/coco/test: 36 files\n", "/content/coco/valid: 73 files\n", "/content/florence2_od/test: 36 files\n", "/content/florence2_od/train: 255 files\n", "/content/florence2_od/valid: 73 files\n", "/content/paligemma/dataset: 364 files\n" ] } ], "source": [ "import os\n", "\n", "def count_jpg_files(directory):\n", " return len([f for f in os.listdir(directory) if f.endswith('.jpg')])\n", "\n", "directories = [\n", " \"/content/florence2_od/test\",\n", " \"/content/florence2_od/train\",\n", " \"/content/florence2_od/valid\",\n", " \"/content/paligemma/dataset\"\n", "]\n", "\n", "for directory in directories:\n", " try:\n", " count = count_jpg_files(directory)\n", " print(f\"{directory}: {count} files\")\n", " except FileNotFoundError:\n", " print(f\"{directory}: Directory not found\")\n" ] }, { "cell_type": "markdown", "metadata": {}, "source": [ "## Florence 2 - dataset preparation" ] }, { "cell_type": "code", "execution_count": 9, "metadata": { "id": "0r7c4TQq9MyS" }, "outputs": [], "source": [ "import os\n", "import json\n", "from datasets import Dataset, Features, Image, Value, DatasetDict\n", "\n", "def load_florence2_annotations(annotation_file, image_dir):\n", " dataset_entries = []\n", " with open(annotation_file, 'r') as f:\n", " for line in f:\n", " ann = json.loads(line)\n", " entry = {\n", " 'image_id': ann['image'],\n", " 'image': os.path.join(image_dir, ann['image']),\n", " 'annotations': ann # Keep all original fields\n", " }\n", " dataset_entries.append(entry)\n", " return dataset_entries\n", "\n", "# Load annotations\n", "train_data = load_florence2_annotations('/content/florence2_od/train/annotations.jsonl', '/content/florence2_od/train')\n", "test_data = load_florence2_annotations('/content/florence2_od/test/annotations.jsonl', '/content/florence2_od/test')\n", "valid_data = load_florence2_annotations('/content/florence2_od/valid/annotations.jsonl', '/content/florence2_od/valid')\n", "\n", "# Define features\n", "features = Features({\n", " 'image_id': Value('string'),\n", " 'image': Image(),\n", " 'annotations': {\n", " 'image': Value('string'),\n", " 'prefix': Value('string'),\n", " 'suffix': Value('string')\n", " }\n", "})\n", "\n", "# Create datasets\n", "florence2_train_dataset = Dataset.from_list(train_data, features=features)\n", "florence2_test_dataset = Dataset.from_list(test_data, features=features)\n", "florence2_valid_dataset = Dataset.from_list(valid_data, features=features)\n", "\n", "# Combine into a DatasetDict\n", "florence2_dataset = DatasetDict({\n", " 'train': florence2_train_dataset,\n", " 'test': florence2_test_dataset,\n", " 'validation': florence2_valid_dataset\n", "})" ] }, { "cell_type": "markdown", "metadata": {}, "source": [ "### push dataset to hub" ] }, { "cell_type": "code", "execution_count": 10, "metadata": { "colab": { "base_uri": "https://localhost:8080/", "height": 469, "referenced_widgets": [ "9062c8deed4745e0a835dcd765112084", "813d166ad65646e986caaf0c0e96387f", "7a23f2ae696f4b5b9c432880bcdf7c9b", "23c07a22f294418b804efd8f69728239", "886ba4e12f0f40b6bc82618d4d9beabf", "152ed4a2a7984c8ead3a9bce86982ade", "a1313f8e1b094708846c06a4a3e429be", "1cefe9f693994189a6f4974389b55585", "9680cccc7a904ea7b48195ff3c4e1be2", "15b9cf822c0b43ff94c7590854503c92", "121e7e46bb3d45aeb56ea130249dc0a1", "60046e1cb9374d3faada7d20d9b49576", "4a248a1cd212401cbb1248505d796ef4", "db85b8924aea44158bb7ab6c08e42a93", "95e7a5a380c24c079c9d04dbaba7c51c", "a252d2b21c694d1eb516e74de3247045", "d440d90a67964398b3f8dfd37cb7d97d", "bf00ad5bbd844604898bd60f0780f8a2", "f567dc0745584e6687dc34c32d70d560", "ae2c8128bfdd421db5f282e5407ea626", "a7a460e74ff84d70af7b517dd1ef8215", "edf6afcae5e543678eb0f7f05075e25b", "f95494f836494265b6e86f5e297bd67c", "bb14862a795540009fae8d7586f5f4be", "910de4fcc23845399744fa33ac537753", "9205719a30854710b6373e5cd7ad1e5b", "f5491e2822f24de0beed18c44a3d3830", "61d3ecf56e894e9bb8db3b072522336b", "0431ebd38d684f079d5d250dc7809052", "10b9b233ecc644aa9a12819ba0aed44c", "aec25383f46f40e0ad589d31e861d9ca", "f44dd38bade6413193daedac04a17166", "e8f89a76a745469993aa7b58d471bfef", "0ee4b0d4182f41239f858c2e1fce299d", "2ccc63c5c9954f618ccede667f5151cb", "c1c172ef4ec04907900c86411d3a5668", "d7bbc5af597848c0a66a4e31539d4299", "dde5dce081334d36bad83b755cf2b813", "597faa79ec2042d7a12ca3678f076bb6", "0b462502ce8d44168ff59932118121c0", "994f2cfc966a40beabce1f9605afa566", "d427aecd8a6b4e2d8d61e672c2eb9f2a", "fc9127559bc94c4ca17f49596dc8a29f", "cf08c1f21e9a4865afe236c3ad80dfa5", "5940702d40ac4ea296bfe606c3495dda", "e17d955df2fd4f648ec775d42d7060dc", "0ef7b5e109194ad0aca2128895373dc4", "58bd829a15b9468da08ca8527d6833da", "e2764d6d1e2543a1b25cd187ff84ab2c", "c18d5b5badad4403863841b1c6a74980", "16a56053748743fa8b1bfda236fb4c00", "8494bfa1b1bb4925bb5f881b905b0fad", "ce7ab79e4d7c4163bba625d958bf682a", "d525665eb4d7487782751d064f5a69e8", "cdc319f2d8bb4a7ba33481390f0e0607", "ad9e499cfde84233a3d9f4a9eef6b911", "eb011e256ce147f2979a929d867cf7ce", "f921672750064228b8f743000f885818", "8674caa416f64cc69a20e3f2c9b899b4", "fa386a24eab34f5f919da7eeb7e08c8a", "58b84e1d836a4e4093e0a3203bcf606b", "83161cd0627c4b35a771c8d0e7794faa", "6e586703961349c6b1902b31431c662a", "f2ef7e1a4575482992c15e8ef2c06650", "279fc2cb135f483caa3472a89a276d4a", "2ea9c56797dc4b0a8b900fbb794c1089", "4d685582c8504c0a98b74fb8895d6b42", "1d93679c90e64c95b970722f203c69cb", "c04511f521804b66b5a1eeb86c450ce3", "97724a3cac1949e3ae40262bc8f66e43", "31505e06027240418c7e71c19eaab76c", "af8908983d1c4c9ca86763ebdf700174", "336bd6162a384584bee08de4a58720c4", "927ec0c77b3c49fe95fe4b3a978ce4c4", "6423ccdac7f4498fa7e798e1a5f083a5", "75cc4a82ef1e4f00b2850881a4fd43f3", "0358d6ef36e04bd39742329831d6a7cd", "0b1161a073f147db862d50ee8745ccb9", "6639e94afdcc4d4ab87d3c6a06cc0a72", "738f5933028b48cabf792632957e500b", "35be68ad9c0a4964aee50007ccc346cc", "b84194bb888d43a7bd4852e33b56096b", "3ae56293f5da4ea6b1a8912eea941f11", "b3a1f6d1123e4e1c8d54eb63fe035185", "cecbe1d80f264a89aa05f7ba2b05e594", "dc1e680913aa4059ab0a09b1a863ba4c", "67fdb8453a6640fbbcdf42d48211d6a7", "cb99c42d749a42b495e8c2bd40c3650f", "7c616ea6685c4b8a8f3cf68026a1716c", "01f325cbab89424584e9af8ec1e9cdc4", "9201dbe48dd34c5d9162d6b7bd51f449", "bd771940991f4dcb81eb5792d0127aa5", "563ac7c905b74697b42d0f6d9c6f3483", "a29eeb1ab6bf405cb5e69fa43f1f5c17", "fa4405c4ab144c34bec37f5643ea68e5", "cc9df0aa22fa45f79244681fdedef575", "835cee42b71a4a539f2503ebcffdee8b", "e17f3f4a2cad40bb81e56469c1d6509d", "ed481b1e6be74a148ad694f6ecc0bd69" ] }, "id": "TTp5OEYU-K2c", "outputId": "32cbb7dd-47dd-4629-c490-5d48a77980ed" }, "outputs": [ { "data": { "application/vnd.jupyter.widget-view+json": { "model_id": "9062c8deed4745e0a835dcd765112084", "version_major": 2, "version_minor": 0 }, "text/plain": [ "Uploading the dataset shards: 0%| | 0/1 [00:00, 'annotations': {'image': 'BloodImage_00343_jpg.rf.d8c56063ce5e40c50efb00a7e0c83c3b.jpg', 'prefix': '', 'suffix': 'RBCRBCRBCRBCRBCRBCRBCRBCRBCPlateletsPlateletsWBC'}}\n" ] } ], "source": [ "# Push to Hub - uncomment next line when ready to push (update with your id)\n", "# florence2_dataset.push_to_hub(\"dwb2023/roboflow100-bccd-florence2\")\n", "\n", "# Print some information about the dataset\n", "print(f\"Dataset splits: {florence2_dataset.keys()}\")\n", "print(f\"Number of training examples: {len(florence2_dataset['train'])}\")\n", "print(f\"Number of testing examples: {len(florence2_dataset['test'])}\")\n", "print(f\"Number of validation examples: {len(florence2_dataset['validation'])}\")\n", "print(f\"Features: {florence2_dataset['train'].features}\")\n", "\n", "# Print a sample entry\n", "print(\"\\nSample entry:\")\n", "print(florence2_dataset['train'][0])" ] }, { "cell_type": "markdown", "metadata": {}, "source": [ "## Paligemma - dataset preparation" ] }, { "cell_type": "code", "execution_count": 11, "metadata": { "id": "QAppgYrYDm4a" }, "outputs": [], "source": [ "import os\n", "import json\n", "from datasets import Dataset, Features, Image, Value, DatasetDict\n", "\n", "def load_paligemma_annotations(annotation_file, image_dir):\n", " dataset_entries = []\n", " with open(annotation_file, 'r') as f:\n", " for line in f:\n", " ann = json.loads(line)\n", " entry = {\n", " 'image_id': ann['image'],\n", " 'image': os.path.join(image_dir, ann['image']),\n", " 'annotations': ann # Keep all original fields\n", " }\n", " dataset_entries.append(entry)\n", " return dataset_entries\n", "\n", "# Load annotations\n", "train_data = load_paligemma_annotations('/content/paligemma/dataset/_annotations.train.jsonl', '/content/paligemma/dataset')\n", "test_data = load_paligemma_annotations('/content/paligemma/dataset/_annotations.test.jsonl', '/content/paligemma/dataset')\n", "valid_data = load_paligemma_annotations('/content/paligemma/dataset/_annotations.valid.jsonl', '/content/paligemma/dataset')\n", "\n", "# Define features\n", "features = Features({\n", " 'image_id': Value('string'),\n", " 'image': Image(),\n", " 'annotations': {\n", " 'image': Value('string'),\n", " 'prefix': Value('string'),\n", " 'suffix': Value('string')\n", " }\n", "})\n", "\n", "# Create datasets\n", "paligemma_train_dataset = Dataset.from_list(train_data, features=features)\n", "paligemma_test_dataset = Dataset.from_list(test_data, features=features)\n", "paligemma_valid_dataset = Dataset.from_list(valid_data, features=features)\n", "\n", "# Combine into a DatasetDict\n", "paligemma_dataset = DatasetDict({\n", " 'train': paligemma_train_dataset,\n", " 'test': paligemma_test_dataset,\n", " 'validation': paligemma_valid_dataset\n", "})" ] }, { "cell_type": "markdown", "metadata": {}, "source": [ "### push dataset to hub" ] }, { "cell_type": "code", "execution_count": 12, "metadata": { "colab": { "base_uri": "https://localhost:8080/", "height": 469, "referenced_widgets": [ "b25ec87d2c9c40f1b368fe572edfad33", "f750f18f367a49b2a566c960d7179e9c", "a1b3d5c74c274a27944894a8995a1015", "43523fd9e09b46f5bd7d6c197b5c62d8", "e5a6adc12de843a48e90eeeaa528149d", "026001b5a65c42ac8085a5eed23a8f3e", "13c31f8ee2cb4ce9a075bcb12d9f6887", "33e6517fe9cf4f658367cd9e001e0a53", "3376cfd183a8416cb163bb9d2d77ab5a", "ad6c403ad17c4f9e823c1c5d6c90fcd8", "07f5fb1c789b4e90aa43a79d85793101", "70aee87dfeba4cf0be18229b2c7b4b3a", "67c26cef6a424b5fb6c8be86a7e6f9f5", "50232e23ac1445599dce4c6f7c4dda71", "a82d293958bb407cbd6db43a3f3d0b20", "f2251ebe2ec44922b194199de76040bf", "e9849d3adfa14b26b969e61a9618d585", "7305736de23d4278b5a5b98679ac670e", "2e83a6881bb2409e932807354ac12f6f", "1ba30c9aad8748108c179d544ddccf4f", "68b07fbc6c6b47c1b23afe3d64d76c49", "88dfbd7a77d840198b6cb1a3b1322222", "90b7dcdbe01646d5acbd00046caef1a3", "ed97eb8ffc084fa98f2317ac0147cc10", "45cad7588a254517aefef73ed25f393d", "50ed239761e54c699747b52273d75b52", "2d0545a664634b25aeec34f7f1d15021", "c34a25df8c8e494ab70d41e673a59e37", "a5f75215cdec43edabd400e98f91e171", "7a7491a8f5fb4d4897baa6a9e5893425", "9eb3d60c1f8d4fa1a902c7932cef9ad8", "8e4ca529627649bc883fc7ba4c667952", "4221294360414ba0ac4777af9d1b5697", "92712b99bd3a440ab0179ab95735fe1c", "d51f5c8b27f847f8b40adb0a5c129a8c", "366f678ecace4e7fa399cabf85c61548", "5b578bf65e194479929049ee657aff21", "708a4f955899482888506b9bd6d1266c", "8e857d2a9ee9407c8608c4d76d494aea", "23cbe473d92844168c73021b0853218c", "d8fb353e99d24fb4ac4bbaad01ae1b7d", "25511813dfda433e89faa33db597121f", "3f1f38f3aad645f28f2296cd5c898f10", "f9269b32f2b3442ebe4a726cb0cda6b1", "f7dfd7964d724b26a838c91952043eac", "58a12fd4e20e4b7f95872ca030bfff83", "d7921b4009fd43eab3a16e99a6a9f7e5", "ba6deac76a5149a8a6233431e4eb4e64", "fb4fc3f15eeb4672844dbdeb5595164a", "3d4579476ed54fa097af1deb57c51721", "b16f55d65838423ebca6262c4c8b09b1", "84f373e8067648eabed54ffeba20ee51", "78c35f6ac5114f16bb111bb748c0566e", "f8dd8a23325c4b40a10cb9e0ec3e9f19", "fae705cd390a402185e34050cd7c4b16", "67797f15063a43e1873d0afd8e07e890", "a2af8f7faf4d40e884bc11d5a951572b", "2df995879d224d6b95ebe4f260e6ef0c", "5f8fb70bddde4977900f841a2edca79a", "401ce642451a436a97c1088f97cce84b", "125c2d06798d4fffadd228e28d3c6a5b", "a8ccc7263a514660b8249bf8a7b40aea", "8e2c4d92640f4313ad6cb5fffacbffb2", "87e3c408bd4c4d4992586445210c87f6", "9c18b552d57b454f9d490d8f27a5a5cb", "b4cab91b4b44423fa76af05b4b1b254e", "b5aa5326428443b6a68e52e5e71b947b", 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"743a50931ef94277a0c8b13fe217b2ca", "cbfa0dcbeb6b41e0873ede5084679575", "571e507a68474bdfb6fe1f86f2105ce0", "5cbf60960e4540cca06ef7d3eb5d81ae", "4d4f88fa5a03472fa22939a6d4a9b942" ] }, "id": "8UfpVbK9-RRw", "outputId": "205bbd46-c6e1-4ecb-a9e3-50421918e255" }, "outputs": [ { "data": { "application/vnd.jupyter.widget-view+json": { "model_id": "b25ec87d2c9c40f1b368fe572edfad33", "version_major": 2, "version_minor": 0 }, "text/plain": [ "Uploading the dataset shards: 0%| | 0/1 [00:00, 'annotations': {'image': 'BloodImage_00327_jpg.rf.dc708dec2caf7249ddca49d41055ca4c.jpg', 'prefix': 'detect Platelets ; RBC ; WBC', 'suffix': ' Platelets ; Platelets'}}\n" ] } ], "source": [ "# Push to Hub - uncomment next line when ready to push (update with your id)\n", "# paligemma_dataset.push_to_hub(\"dwb2023/roboflow-bccd-paligemma\")\n", "\n", "# Print some information about the dataset\n", "print(f\"Dataset splits: {paligemma_dataset.keys()}\")\n", "print(f\"Number of training examples: {len(paligemma_dataset['train'])}\")\n", "print(f\"Number of testing examples: {len(paligemma_dataset['test'])}\")\n", "print(f\"Number of validation examples: {len(paligemma_dataset['validation'])}\")\n", "print(f\"Features: {paligemma_dataset['train'].features}\")\n", "\n", "# Print a sample entry\n", "print(\"\\nSample entry:\")\n", "print(paligemma_dataset['train'][0])" ] }, { "cell_type": "markdown", "metadata": {}, "source": [ "## Compare records across datasets" ] }, { "cell_type": "code", "execution_count": 13, "metadata": { "id": "nSiuyM3kKVro" }, "outputs": [], "source": [ "# Search for same image across datasets\n", "image_id_to_find = 'BloodImage_00343_jpg.rf.d8c56063ce5e40c50efb00a7e0c83c3b.jpg'\n", "\n", "# Function to find a record by image_id\n", "def find_record_by_image_id(dataset, image_id):\n", " for record in dataset['train']:\n", " if record['image_id'] == image_id:\n", " return record\n", " return None" ] }, { "cell_type": "code", "execution_count": 15, "metadata": { "colab": { "base_uri": "https://localhost:8080/" }, "id": "-gTVMcLgLiqB", "outputId": "33c30ff1-a5cc-47e2-f772-2a5e8e5ba585" }, "outputs": [ { "name": "stdout", "output_type": "stream", "text": [ "Record found: {'image_id': 'BloodImage_00343_jpg.rf.d8c56063ce5e40c50efb00a7e0c83c3b.jpg', 'image': , 'annotations': {'image': 'BloodImage_00343_jpg.rf.d8c56063ce5e40c50efb00a7e0c83c3b.jpg', 'prefix': '', 'suffix': 'RBCRBCRBCRBCRBCRBCRBCRBCRBCPlateletsPlateletsWBC'}}\n" ] } ], "source": [ "# Find the Roboflow Florence2 record\n", "record = find_record_by_image_id(florence2_dataset, image_id_to_find)\n", "\n", "# Display the record\n", "if record:\n", " print(f\"Record found: {record}\")\n", "else:\n", " print(\"Record not found\")" ] }, { "cell_type": "code", "execution_count": 16, "metadata": { "colab": { "base_uri": "https://localhost:8080/" }, "id": "D9v-fIxaNUfI", "outputId": "117fbead-cfa9-48af-abd8-95c7cc979892" }, "outputs": [ { "name": "stdout", "output_type": "stream", "text": [ "Record found: {'image_id': 'BloodImage_00343_jpg.rf.d8c56063ce5e40c50efb00a7e0c83c3b.jpg', 'image': , 'annotations': {'image': 'BloodImage_00343_jpg.rf.d8c56063ce5e40c50efb00a7e0c83c3b.jpg', 'prefix': 'detect Platelets ; RBC ; WBC', 'suffix': ' RBC ; RBC ; RBC ; RBC ; RBC ; RBC ; RBC ; RBC ; RBC ; Platelets ; Platelets ; WBC'}}\n" ] } ], "source": [ "# Find the Roboflow Paligemma record\n", "record = find_record_by_image_id(paligemma_dataset, image_id_to_find)\n", "\n", "# Display the record\n", "if record:\n", " print(f\"Record found: {record}\")\n", "else:\n", " print(\"Record not found\")" ] } ], "metadata": { "colab": { "authorship_tag": "ABX9TyOMxc16cMc4VUczcMzaYiLi", "include_colab_link": true, "machine_shape": "hm", "provenance": [] }, "kernelspec": { "display_name": "Python 3", "name": "python3" }, "language_info": { "name": "python" }, "widgets": { "application/vnd.jupyter.widget-state+json": { "0005cbb6f80749878e61e638ecc065aa": { "model_module": 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