"""Data-loading functions in order to create a Dataset and DataLoaders. Transforms for loaders are in transforms.py """ import json import os from pathlib import Path import numpy as np import torch import yaml from imageio import imread from PIL import Image from torch.utils.data import DataLoader, Dataset from torchvision import transforms from climategan.transforms import get_transforms from climategan.tutils import get_normalized_depth_t from climategan.utils import env_to_path, is_image_file classes_dict = { "s": { # unity 0: [0, 0, 255, 255], # Water 1: [55, 55, 55, 255], # Ground 2: [0, 255, 255, 255], # Building 3: [255, 212, 0, 255], # Traffic items 4: [0, 255, 0, 255], # Vegetation 5: [255, 97, 0, 255], # Terrain 6: [255, 0, 0, 255], # Car 7: [60, 180, 60, 255], # Trees 8: [255, 0, 255, 255], # Person 9: [0, 0, 0, 255], # Sky 10: [255, 255, 255, 255], # Default }, "r": { # deeplab v2 0: [0, 0, 255, 255], # Water 1: [55, 55, 55, 255], # Ground 2: [0, 255, 255, 255], # Building 3: [255, 212, 0, 255], # Traffic items 4: [0, 255, 0, 255], # Vegetation 5: [255, 97, 0, 255], # Terrain 6: [255, 0, 0, 255], # Car 7: [60, 180, 60, 255], # Trees 8: [220, 20, 60, 255], # Person 9: [8, 19, 49, 255], # Sky 10: [0, 80, 100, 255], # Default }, "kitti": { 0: [210, 0, 200], # Terrain 1: [90, 200, 255], # Sky 2: [0, 199, 0], # Tree 3: [90, 240, 0], # Vegetation 4: [140, 140, 140], # Building 5: [100, 60, 100], # Road 6: [250, 100, 255], # GuardRail 7: [255, 255, 0], # TrafficSign 8: [200, 200, 0], # TrafficLight 9: [255, 130, 0], # Pole 10: [80, 80, 80], # Misc 11: [160, 60, 60], # Truck 12: [255, 127, 80], # Car 13: [0, 139, 139], # Van 14: [0, 0, 0], # Undefined }, "flood": { 0: [255, 0, 0], # Cannot flood 1: [0, 0, 255], # Must flood 2: [0, 0, 0], # May flood }, } kitti_mapping = { 0: 5, # Terrain -> Terrain 1: 9, # Sky -> Sky 2: 7, # Tree -> Trees 3: 4, # Vegetation -> Vegetation 4: 2, # Building -> Building 5: 1, # Road -> Ground 6: 3, # GuardRail -> Traffic items 7: 3, # TrafficSign -> Traffic items 8: 3, # TrafficLight -> Traffic items 9: 3, # Pole -> Traffic items 10: 10, # Misc -> default 11: 6, # Truck -> Car 12: 6, # Car -> Car 13: 6, # Van -> Car 14: 10, # Undefined -> Default } def encode_exact_segmap(seg, classes_dict, default_value=14): """ When the mapping (rgb -> label) is known to be exact (no approximative rgb values) maps rgb image to segmap labels Args: seg (np.ndarray): H x W x 3 RGB image classes_dict (dict): Mapping {class: rgb value} default_value (int, optional): Value for unknown label. Defaults to 14. Returns: np.ndarray: Segmap as labels, not RGB """ out = np.ones((seg.shape[0], seg.shape[1])) * default_value for cindex, cvalue in classes_dict.items(): out[np.where((seg == cvalue).all(-1))] = cindex return out def merge_labels(labels, mapping, default_value=14): """ Maps labels from a source domain to labels of a target domain, typically kitti -> climategan Args: labels (np.ndarray): input segmap labels mapping (dict): source_label -> target_label default_value (int, optional): Unknown label. Defaults to 14. Returns: np.ndarray: Adapted labels """ out = np.ones_like(labels) * default_value for source, target in mapping.items(): out[labels == source] = target return out def process_kitti_seg(path, kitti_classes, merge_map, default=14): """ Processes a path to produce a 1 x 1 x H x W torch segmap %timeit process_kitti_seg(path, classes_dict, mapping, default=14) 326 ms ± 118 ms per loop (mean ± std. dev. of 7 runs, 1 loop each) Args: path (str | pathlib.Path): Segmap RBG path kitti_classes (dict): Kitti map label -> rgb merge_map (dict): map kitti_label -> climategan_label default (int, optional): Unknown kitti label. Defaults to 14. Returns: torch.Tensor: 1 x 1 x H x W torch segmap """ seg = imread(path) labels = encode_exact_segmap(seg, kitti_classes, default_value=default) merged = merge_labels(labels, merge_map, default_value=default) return torch.tensor(merged).unsqueeze(0).unsqueeze(0) def decode_segmap_merged_labels(tensor, domain, is_target, nc=11): """Creates a label colormap for classes used in Unity segmentation benchmark. Arguments: tensor -- segmented image of size (1) x (nc) x (H) x (W) if prediction, or size (1) x (1) x (H) x (W) if target Returns: RGB tensor of size (1) x (3) x (H) x (W) #""" if is_target: # Target is size 1 x 1 x H x W idx = tensor.squeeze(0).squeeze(0) else: # Prediction is size 1 x nc x H x W idx = torch.argmax(tensor.squeeze(0), dim=0) indexer = torch.tensor(list(classes_dict[domain].values()))[:, :3] return indexer[idx.long()].permute(2, 0, 1).to(torch.float32).unsqueeze(0) def decode_segmap_cityscapes_labels(image, nc=19): """Creates a label colormap used in CITYSCAPES segmentation benchmark. Arguments: image {array} -- segmented image (array of image size containing class at each pixel) Returns: array of size 3*nc -- A colormap for visualizing segmentation results. """ colormap = np.zeros((19, 3), dtype=np.uint8) colormap[0] = [128, 64, 128] colormap[1] = [244, 35, 232] colormap[2] = [70, 70, 70] colormap[3] = [102, 102, 156] colormap[4] = [190, 153, 153] colormap[5] = [153, 153, 153] colormap[6] = [250, 170, 30] colormap[7] = [220, 220, 0] colormap[8] = [107, 142, 35] colormap[9] = [152, 251, 152] colormap[10] = [70, 130, 180] colormap[11] = [220, 20, 60] colormap[12] = [255, 0, 0] colormap[13] = [0, 0, 142] colormap[14] = [0, 0, 70] colormap[15] = [0, 60, 100] colormap[16] = [0, 80, 100] colormap[17] = [0, 0, 230] colormap[18] = [119, 11, 32] r = np.zeros_like(image).astype(np.uint8) g = np.zeros_like(image).astype(np.uint8) b = np.zeros_like(image).astype(np.uint8) for col in range(nc): idx = image == col r[idx] = colormap[col, 0] g[idx] = colormap[col, 1] b[idx] = colormap[col, 2] rgb = np.stack([r, g, b], axis=2) return rgb def find_closest_class(pixel, dict_classes): """Takes a pixel as input and finds the closest known pixel value corresponding to a class in dict_classes Arguments: pixel -- tuple pixel (R,G,B,A) Returns: tuple pixel (R,G,B,A) corresponding to a key (a class) in dict_classes """ min_dist = float("inf") closest_pixel = None for pixel_value in dict_classes.keys(): dist = np.sqrt(np.sum(np.square(np.subtract(pixel, pixel_value)))) if dist < min_dist: min_dist = dist closest_pixel = pixel_value return closest_pixel def encode_segmap(arr, domain): """Change a segmentation RGBA array to a segmentation array with each pixel being the index of the class Arguments: numpy array -- segmented image of size (H) x (W) x (4 RGBA values) Returns: numpy array of size (1) x (H) x (W) with each pixel being the index of the class """ new_arr = np.zeros((1, arr.shape[0], arr.shape[1])) dict_classes = { tuple(rgba_value): class_id for (class_id, rgba_value) in classes_dict[domain].items() } for i in range(arr.shape[0]): for j in range(arr.shape[1]): pixel_rgba = tuple(arr[i, j, :]) if pixel_rgba in dict_classes.keys(): new_arr[0, i, j] = dict_classes[pixel_rgba] else: pixel_rgba_closest = find_closest_class(pixel_rgba, dict_classes) new_arr[0, i, j] = dict_classes[pixel_rgba_closest] return new_arr def encode_mask_label(arr, domain): """Change a segmentation RGBA array to a segmentation array with each pixel being the index of the class Arguments: numpy array -- segmented image of size (H) x (W) x (3 RGB values) Returns: numpy array of size (1) x (H) x (W) with each pixel being the index of the class """ diff = np.zeros((len(classes_dict[domain].keys()), arr.shape[0], arr.shape[1])) for cindex, cvalue in classes_dict[domain].items(): diff[cindex, :, :] = np.sqrt( np.sum( np.square(arr - np.tile(cvalue, (arr.shape[0], arr.shape[1], 1))), axis=2, ) ) return np.expand_dims(np.argmin(diff, axis=0), axis=0) def transform_segmap_image_to_tensor(path, domain): """ Transforms a segmentation image to a tensor of size (1) x (1) x (H) x (W) with each pixel being the index of the class """ arr = np.array(Image.open(path).convert("RGBA")) arr = encode_segmap(arr, domain) arr = torch.from_numpy(arr).float() arr = arr.unsqueeze(0) return arr def save_segmap_tensors(path_to_json, path_to_dir, domain): """ Loads the segmentation images mentionned in a json file, transforms them to tensors and save the tensors in the wanted directory Args: path_to_json: complete path to the json file where to find the original data path_to_dir: path to the directory where to save the tensors as tensor_name.pt domain: domain of the images ("r" or "s") e.g: save_tensors( "/network/tmp1/ccai/data/climategan/seg/train_s.json", "/network/tmp1/ccai/data/munit_dataset/simdata/Unity11K_res640/Seg_tensors/", "s", ) """ ims_list = None if path_to_json: path_to_json = Path(path_to_json).resolve() with open(path_to_json, "r") as f: ims_list = yaml.safe_load(f) assert ims_list is not None for im_dict in ims_list: for task_name, path in im_dict.items(): if task_name == "s": file_name = os.path.splitext(path)[0] # remove extension file_name = file_name.rsplit("/", 1)[-1] # keep only the file_name tensor = transform_segmap_image_to_tensor(path, domain) torch.save(tensor, path_to_dir + file_name + ".pt") def pil_image_loader(path, task): if Path(path).suffix == ".npy": arr = np.load(path).astype(np.uint8) elif is_image_file(path): # arr = imread(path).astype(np.uint8) arr = np.array(Image.open(path).convert("RGB")) else: raise ValueError("Unknown data type {}".format(path)) # Convert from RGBA to RGB for images if len(arr.shape) == 3 and arr.shape[-1] == 4: arr = arr[:, :, 0:3] if task == "m": arr[arr != 0] = 1 # Make sure mask is single-channel if len(arr.shape) >= 3: arr = arr[:, :, 0] # assert len(arr.shape) == 3, (path, task, arr.shape) return Image.fromarray(arr) def tensor_loader(path, task, domain, opts): """load data as tensors Args: path (str): path to data task (str) domain (str) Returns: [Tensor]: 1 x C x H x W """ if task == "s": if domain == "kitti": return process_kitti_seg( path, classes_dict["kitti"], kitti_mapping, default=14 ) return torch.load(path) elif task == "d": if Path(path).suffix == ".npy": arr = np.load(path) else: arr = imread(path) # .astype(np.uint8) /!\ kitti is np.uint16 tensor = torch.from_numpy(arr.astype(np.float32)) tensor = get_normalized_depth_t( tensor, domain, normalize="d" in opts.train.pseudo.tasks, log=opts.gen.d.classify.enable, ) tensor = tensor.unsqueeze(0) return tensor elif Path(path).suffix == ".npy": arr = np.load(path).astype(np.float32) elif is_image_file(path): arr = imread(path).astype(np.float32) else: raise ValueError("Unknown data type {}".format(path)) # Convert from RGBA to RGB for images if len(arr.shape) == 3 and arr.shape[-1] == 4: arr = arr[:, :, 0:3] if task == "x": arr -= arr.min() arr /= arr.max() arr = np.moveaxis(arr, 2, 0) elif task == "s": arr = np.moveaxis(arr, 2, 0) elif task == "m": if arr.max() > 127: arr = (arr > 127).astype(arr.dtype) # Make sure mask is single-channel if len(arr.shape) >= 3: arr = arr[:, :, 0] arr = np.expand_dims(arr, 0) return torch.from_numpy(arr).unsqueeze(0) class OmniListDataset(Dataset): def __init__(self, mode, domain, opts, transform=None): self.opts = opts self.domain = domain self.mode = mode self.tasks = set(opts.tasks) self.tasks.add("x") if "p" in self.tasks: self.tasks.add("m") file_list_path = Path(opts.data.files[mode][domain]) if "/" not in str(file_list_path): file_list_path = Path(opts.data.files.base) / Path( opts.data.files[mode][domain] ) if file_list_path.suffix == ".json": self.samples_paths = self.json_load(file_list_path) elif file_list_path.suffix in {".yaml", ".yml"}: self.samples_paths = self.yaml_load(file_list_path) else: raise ValueError("Unknown file list type in {}".format(file_list_path)) if opts.data.max_samples and opts.data.max_samples != -1: assert isinstance(opts.data.max_samples, int) self.samples_paths = self.samples_paths[: opts.data.max_samples] self.filter_samples() if opts.data.check_samples: print(f"Checking samples ({mode}, {domain})") self.check_samples() self.file_list_path = str(file_list_path) self.transform = transform def filter_samples(self): """ Filter out data which is not required for the model's tasks as defined in opts.tasks """ self.samples_paths = [ {k: v for k, v in s.items() if k in self.tasks} for s in self.samples_paths ] def __getitem__(self, i): """Return an item in the dataset with fields: { data: transform({ domains: values }), paths: [{task: path}], domain: [domain], mode: [train|val] } Args: i (int): index of item to retrieve Returns: dict: dataset item where tensors of data are in item["data"] which is a dict {task: tensor} """ paths = self.samples_paths[i] # always apply transforms, # if no transform is specified, ToTensor and Normalize will be applied item = { "data": self.transform( { task: tensor_loader( env_to_path(path), task, self.domain, self.opts, ) for task, path in paths.items() } ), "paths": paths, "domain": self.domain if self.domain != "kitti" else "s", "mode": self.mode, } return item def __len__(self): return len(self.samples_paths) def json_load(self, file_path): with open(file_path, "r") as f: return json.load(f) def yaml_load(self, file_path): with open(file_path, "r") as f: return yaml.safe_load(f) def check_samples(self): """Checks that every file listed in samples_paths actually exist on the file-system """ for s in self.samples_paths: for k, v in s.items(): assert Path(v).exists(), f"{k} {v} does not exist" def get_loader(mode, domain, opts): if ( domain != "kitti" or not opts.train.kitti.pretrain or not opts.train.kitti.batch_size ): batch_size = opts.data.loaders.get("batch_size", 4) else: batch_size = opts.train.kitti.get("batch_size", 4) return DataLoader( OmniListDataset( mode, domain, opts, transform=transforms.Compose(get_transforms(opts, mode, domain)), ), batch_size=batch_size, shuffle=True, num_workers=opts.data.loaders.get("num_workers", 8), pin_memory=True, # faster transfer to gpu drop_last=True, # avoids batchnorm pbs if last batch has size 1 ) def get_all_loaders(opts): loaders = {} for mode in ["train", "val"]: loaders[mode] = {} for domain in opts.domains: if mode in opts.data.files: if domain in opts.data.files[mode]: loaders[mode][domain] = get_loader(mode, domain, opts) return loaders