class Sequence: def __init__(self, sequence): self.sequence = sequence.lower() def get_seq_length(self): return len(self.sequence) # Total length of sequence def get_unit_count(self, unit): unit = unit.lower() return self.sequence.count(unit) # Unit count of specified unit in sequence def get_unit_percentage(self, unit): total_units = self.get_seq_length() unit_count = self.get_unit_count(unit) unit_percentage = (unit_count / total_units) * 100 return unit_percentage # unit percentage for specified unit in sequence def get_unit_at_position(self, position): pos = position - 1 if 0 <= pos < len(self.sequence): base_at_pos = self.sequence[pos] return base_at_pos else: return "Position is out of range. Positions should be 1 - {}".format(len(self.sequence)) # Returns the unit at a specified position in the sequence def get_unit_at_positions(self, position_list): if self.check_positions(position_list): pos_dict = {i: self.sequence[i - 1] for i in position_list if 0 <= i < len(self.sequence)} return pos_dict else: return "Position is out of range.Positions should be 1 - {}".format(len(self.sequence)) # Returns unit for each position in list def check_positions(self, position_list): # Check if the positions are within the range of the sequence length # Value = 0 -> position out of sequence range # Value = 1 -> position within sequence range checked = {} for pos in position_list: if pos <= 0 or pos > len(self.sequence): checked[pos] = 0 else: checked[pos] = 1 # Check if all values are equal to 1 / All positions in the list are within the range of the sequence length all_values_equal_to_1 = all(value == 1 for value in checked.values()) if all_values_equal_to_1: valid = True else: valid = False return valid def get_subsequence(self, start_position, end_position): # Ensure the start and end positions are within the bounds of the sequence if start_position > 0 and end_position <= len(self.sequence): return self.sequence[start_position - 1:end_position] else: return "Position is out of range. Positions should be 1 - {}".format(len(self.sequence)) # Returns the subsequence based on given positions def subsequence_total_units(self, start_position, end_position): return len(self.get_subsequence(start_position, end_position)) # Returns the total number of units in the subsequence