{
  "lang":"en",
  "name":"ner_jnlpba_md",
  "version":"0.5.3",
  "description":"Spacy Models for Biomedical Text.",
  "author":"Allen Institute for Artificial Intelligence",
  "email":"ai2-info@allenai.org",
  "url":"https://allenai.github.io/SciSpaCy/",
  "license":"CC BY-SA 3.0",
  "spacy_version":">=3.6.1,<3.7.0",
  "spacy_git_version":"458bc5f45",
  "vectors":{
    "width":200,
    "vectors":50000,
    "keys":4087446,
    "name":"en_core_sci_md.vectors"
  },
  "labels":{
    "tok2vec":[

    ],
    "tagger":[
      "$",
      "''",
      ",",
      "-LRB-",
      "-RRB-",
      ".",
      ":",
      "ADD",
      "AFX",
      "CC",
      "CD",
      "DT",
      "EX",
      "FW",
      "HYPH",
      "IN",
      "JJ",
      "JJR",
      "JJS",
      "LS",
      "MD",
      "NFP",
      "NN",
      "NNP",
      "NNPS",
      "NNS",
      "PDT",
      "POS",
      "PRP",
      "PRP$",
      "RB",
      "RBR",
      "RBS",
      "RP",
      "SYM",
      "TO",
      "UH",
      "VB",
      "VBD",
      "VBG",
      "VBN",
      "VBP",
      "VBZ",
      "WDT",
      "WP",
      "WP$",
      "WRB",
      "XX",
      "``"
    ],
    "attribute_ruler":[

    ],
    "lemmatizer":[

    ],
    "parser":[
      "ROOT",
      "acl",
      "acl:relcl",
      "acomp",
      "advcl",
      "advmod",
      "amod",
      "amod@nmod",
      "appos",
      "attr",
      "aux",
      "auxpass",
      "case",
      "cc",
      "cc:preconj",
      "ccomp",
      "compound",
      "compound:prt",
      "conj",
      "cop",
      "csubj",
      "dative",
      "dep",
      "det",
      "det:predet",
      "dobj",
      "expl",
      "intj",
      "mark",
      "meta",
      "mwe",
      "neg",
      "nmod",
      "nmod:npmod",
      "nmod:poss",
      "nmod:tmod",
      "nsubj",
      "nsubjpass",
      "nummod",
      "parataxis",
      "pcomp",
      "pobj",
      "preconj",
      "predet",
      "prep",
      "punct",
      "quantmod",
      "xcomp"
    ],
    "ner":[
      "CELL_LINE",
      "CELL_TYPE",
      "DNA",
      "PROTEIN",
      "RNA"
    ]
  },
  "pipeline":[
    "tok2vec",
    "tagger",
    "attribute_ruler",
    "lemmatizer",
    "parser",
    "ner"
  ],
  "components":[
    "tok2vec",
    "tagger",
    "attribute_ruler",
    "lemmatizer",
    "parser",
    "ner"
  ],
  "disabled":[

  ],
  "performance":{
    "tag_acc":0.0,
    "lemma_acc":0.0,
    "dep_uas":0.0,
    "dep_las":0.0,
    "dep_las_per_type":0.0,
    "sents_p":0.0,
    "sents_r":0.0,
    "sents_f":0.0,
    "ents_f":0.7615577317,
    "ents_p":0.7696202532,
    "ents_r":0.7536623845,
    "ents_per_type":{
      "DNA":{
        "p":0.711627907,
        "r":0.7362848893,
        "f":0.7237464522
      },
      "CELL_LINE":{
        "p":0.7896440129,
        "r":0.6256410256,
        "f":0.6981402003
      },
      "PROTEIN":{
        "p":0.7970276008,
        "r":0.789983165,
        "f":0.7934897485
      },
      "CELL_TYPE":{
        "p":0.7652671756,
        "r":0.7623574144,
        "f":0.7638095238
      },
      "RNA":{
        "p":0.6951219512,
        "r":0.5377358491,
        "f":0.6063829787
      }
    },
    "ner_loss":17189.9353724052
  },
  "sources":[
    "JNLPBA",
    "OntoNotes 5",
    "Common Crawl",
    "GENIA 1.0"
  ],
  "requirements":[

  ]
}