格孢菌目（學名：Pleosporales），是座囊菌綱下的一個目。所屬大多數種類都是腐生生物，但也有幾種寄生於植物。



下屬分類

本科包括以下屬：


* Acrocalymmaceae

* 懸岩菌科 Aigialaceae

* Amniculicolaceae

* Amorosiaceae

* Anastomitrabeculiaceae

* Anteagloniaceae

* Aquasubmersaceae

* Arthopyreniaceae

* Ascocylindricaceae

* Astrosphaeriellaceae

* Bambusicolaceae

* Biatriosporaceae

* Camarosporiaceae

* Camarosporidiellaceae

* Caryosporaceae

* Coniothyriaceae

* Corynesporascaceae

* Cryptocoryneaceae

* Cucurbitariaceae

* Cyclothyriellaceae

* Dacampiaceae

* Delitschiaceae

* Diademaceae

* Dictyosporiaceae

* Didymellaceae

* Didymosphaeriaceae

* Dothidotthiaceae

* Fenestellaceae

* Fuscostagonosporaceae

* Fusculinaceae

* Halojulellaceae

* Halotthiaceae

* Hermatomycetaceae

* Hypsostromataceae

* Kirschsteiniotheliaceae

* Latoruaceae

* Lentimurisporaceae

* Lentitheciaceae

* Leptosphaeriaceae

* Libertasomycetaceae

* Ligninsphaeriaceae

* Lindgomycetaceae

* Longiostiolaceae

* Longipedicellataceae

* Lophiostomataceae

* Lophiotremataceae

* Macrodiplodiopsidaceae

* Macrovalsariaceae

* Massariaceae

* Massarinaceae

* 黑球腔菌科 Melanommataceae

* Montagnulaceae

* Morosphaeriaceae

* Mycoporaceae

* Naetrocymbaceae

* Neocamarosporiaceae

* Neohendersoniaceae

* Neomassarinaceae

* Neophaeosphaeriaceae

* Neopyrenochaetaceae

* Nigrogranaceae

* Occultibambusaceae

* Ohleriaceae

* Parabambusicolaceae

* Paradictyoarthriniaceae

* Paralophiostomataceae

* Parapyrenochaetaceae

* Parodiellaceae

* Periconiaceae

* Phaeoseptaceae

* Phaeosphaeriaceae

* Platystomaceae

* Pleomassariaceae

* Pleomonodictydaceae

* 格孢菌科 Pleosporaceae

* Podonectriaceae

* Pseudoastrosphaeriellaceae

* Pseudoberkleasmiaceae

* Pseudocoleodictyosporaceae

* Pseudolophiotremataceae

* Pseudomassarinaceae

* Pseudopyrenochaetaceae

* Pyrenidiaceae

* Pyrenochaetopsidaceae

* Roussoellaceae

* Salsugineaceae

* Shiraiaceae

* Sporormiaceae

* Striatiguttulaceae

* Sublophiostomataceae

* Sulcatisporaceae

* Teichosporaceae

* Testudinaceae

* Tetraplosphaeriaceae

* Thyridariaceae

* Torulaceae

* Trematosphaeriaceae

* Tzeananiaceae

* Wicklowiaceae

* Zopfiaceae

科的地位未定的屬：


* _Abrothallus_

* _Aciesia_

* _Acuminatispora_ S.N.Zhang, K.D.Hyde & J.K.Liu, 2018

* _Aegeanispora_ E.B.G.Jones & Abdel-Wahab, 2017

* _Antealophiotrema_ A.Hashim. & Kaz.Tanaka, 2017

* _Apiosporella_

* _Ascorhombispora_ L.Cai & K.D.Hyde, 2007

* _Ascoronospora_ Matsushima, 2003

* _Asterella_

* _Asterotheca_

* _Astrosphaeriellopsis_

* _Astrotheca_

* _Atradidymella_ M.L.Davey & Currah

* _Bachmanniomyces_

* _Bactrodesmium_ Cooke, 1883

* _Bahusandhika_ Subram., 1956

* _Bambusistroma_

* _Berkleasmium_ Zobel

* _Blastostroma_ C.Z.Wei, Y.Harada & K.Katumoto, 1998

* _Briansuttonia_ R.F.Castañeda, D.W.Minter & M.Saikawa, 2004

* _Camarographium_ Bubák, 1916

* _Centrospora_ Neerg., 1942

* _Cephalotrichum_

* _Chaetophoma_ Cooke

* _Cheiromyces_ Berk. & M.A.Curtis, 1857

* _Cheirosporium_ L.Cai & K.D.Hyde, 2008

* _Clavariopsis_ De Wild., 1895

* _Clematidis_ Tibpromma, Camporesi & K.D.Hyde, 2016

* _Coniothyrina_ Syd. & P.Syd.

* _Cornutispora_ Piroz.

* _Coronospora_ M.B.Ellis, 1971

* _Cryptodidymosphaerites_ Currah, Stockey & B.A.LePage, 1998

* _Cystocoleus_

* _Dactuliochaeta_ G.L.Hartman & J.B.Sinclair, 1988

* _Dactuliophora_ C.L.A.Leakey, 1964

* _Dematium_ Pers.

* _Elegantimyces_ T.K.Goh, K.M.Tsui & K.D.Hyde, 1998

* _Eschatogonia_

* _Everniicola_ D.Hawksw.

* _Farasanispora_

* _Fusiformiseptata_ W.Dong, H.Zhang & K.D.Hyde, 2020

* _Gordonomyces_ Crous & Marinc., 2011

* _Hobus_ Jaklitsch & Voglmayr, 2016

* _Hyalobelemnospora_ T.Matsushima, 1993

* _Hymenobia_ Nyl.

* _Inflatispora_ Y.Zhang ter, J.Fourn. & K.D.Hyde, 2011

* _Lepraria_

* _Leprocaulon_

* _Leptothyrium Kunze_

* _Lichenoconium_

* _Lichenodiplis_

* _Lichenosticta_

* _Lignosphaeria_ Boonmee, Thambugala & K.D.Hyde, 2015

* _Margaretbarromyces_ R.A.Mindell, R.S.Currah, R.A.Stockey & G.Beard, 2007

* _Massalongia_

* _Megacapitula_ J.L.Chen & Tzean, 1993

* _Megatomentella_ D.A.C.Almeida, Gusmão & A.N.Mill.

* _Milospium_ D.Hawksw.

* _Minutophoma_ D.Hawksw.

* _Monoblastiopsis_ R.C.Harris & C.A.Morse, 2008

* _Mycocentrospora_ Deighton

* _Mycodidymella_ C.Z.Wei, Y.Harada & K.Katumoto, 1998

* _Neohendersonia_ Petr.

* _Neoheteroceras_ Nag Raj

* _Neolamya_

* _Neomedicopsis_ Crous & Akulov, 2019

* _Neooccultibambusa_ Doilom & K.D.Hyde, 2016

* _Neopodoconis_ Rifai, 2008

* _Paraepicoccum_ Matsush., 1993

* _Parameliola_

* _Passerinula_ Sacc.

* _Perthomyces_ Crous, 2017

* _Phaeosporobolus_

* _Phaeostagonospora_ A.W.Ramaley, 1997

* _Phellinocrescentia_ Crous & Decock, 2014

* _Plectophomella_ Moesz, 1922

* _Pleiochaeta_ (Sacc.) S.Hughes

* _Pleocatenata_ Y.R.Sun, Y.Wang & K.D.Hyde, 2022

* _Polyschema_ H.P.Upadhyay

* _Protocucurbitaria_ Naumov, 1951

* _Pseudochaetosphaeronema_ Punith., 1979

* _Pseudodidymella_ C.Z.Wei, Y.Harada & K.Katumoto, 1997

* _Pseudopassalora_ Crous, 2011

* _Pseudoplea_

* _Pseudopyrenidium_ Nav.-Ros., Zhurb. & Cl.Roux, 2010

* _Pseudorobillarda_ M.Morelet, 1968

* _Pseudosphaeria_ Höhn., 1907

* _Pteridiospora_ Penz. & Sacc.

* _Refractohilum_ D.Hawksw.

* _Rhopographus_ Nitschke ex Fuckel

* _Sarcopyrenia_

* _Schizostoma_

* _Sclerococcum_

* _Slafractonia_

* _Spiroplana_ Voglmayr, M.J.Park & H.D.Shin, 2011

* _Sporidesmium_ Link Ex Fries, 1821

* _Sporidesmium_ Link, 1809

* _Sporocybe_ Fr., 1825

* _Subglobosporium_ Doilom & K.D.Hyde, 2016

* _Thamnogalla_

* _Trichobotrys_ Penz. & Sacc.

* _Trichurus_

* _Trinosporium_ Crous & Decock, 2012

* _Vargamyces_ Tóth

* _Versicolorisporium_ Sat.Hatak., Kaz.Tanaka & Y.Harada, 2008

* _Vouauxiella_ Petr. & Syd.

* _Vouauxiomyces_ Dyko & D.Hawksw.

* _Xanthoriicola_

* _Xenobotryosphaeria_ Quaedvlieg, Verkley & Crous, 2013

* _Xenophoma_