yusuke1997/dblp-id-title huggingface dataset:
A Survey on Recent Progress in the Theory of Evolutionary Algorithms for Discrete Optimization
Is Our Archiving Reliable? Multiobjective Archiving Methods on "Simple" Artificial Input Sequences
A Survey on High-dimensional Gaussian Process Modeling with Application to Bayesian Optimization
P2P Energy Trading through Prospect Theory, Differential Evolution, and Reinforcement Learning
Fully Autonomous Programming Using Iterative Multi-Agent Debugging with Large Language Models
Theoretical and Empirical Analysis of Parameter Control Mechanisms in the (1 + (λ, λ)) Genetic Algorithm
Code and Data Synthesis for Genetic Improvement in Emergent Software Systems
Constraint-Objective Cooperative Coevolution for Large-scale Constrained Optimization
Layer-Wise Learning Rate Optimization for Task-Dependent Fine-Tuning of Pre-Trained Models: An Evolutionary Approach
Multi-Objectivising Acquisition Functions in Bayesian Optimisation
Evolving to Find Optimizations Humans Miss: Using Evolutionary Computation to Improve GPU Code for Bioinformatics Applications
IOHanalyzer: Detailed Performance Analyses for Iterative Optimization Heuristics
Foreword: asynchronous cellular automata and nature-inspired computation
Spiking neural P systems and their semantics in Haskell
Kernel clustering using a hybrid memetic algorithm
An improved extremal optimization based on the distribution knowledge of candidate solutions
It started with Watson and Crick, but it sure didn't end there: Pitfalls and possibilities beyond the classic double helix
Time series forecasting with genetic programming
DNA computing capabilities for game theory
Incorporation and use of modified nucleotides in aqueous DNA computing
Protein structure prediction using distributed parallel particle swarm optimization
Amorphous computing: a research agenda for the near future
A tutorial on multiobjective optimization: fundamentals and evolutionary methods
A design of generalized minimum-state-change FSSP algorithms and their implementations
Combinatorial game associated to the one dimensional Schelling's model of social segregation
Entropy and algorithmic complexity in quantum information theory
Hyperpath-based vehicle routing and scheduling method in time-varying networks for airport shuttle service
An adaptive genetic algorithm for parameter estimation of biological oscillator models to achieve target quantitative system response
3-color bounded patterned self-assembly
About reversibility in sP colonies and reaction systems
Attractor landscapes in Boolean networks with firing memory: a theoretical study applied to genetic networks
How much contextuality?
An analysis of different types and effects of asynchronicity in cellular automata update schemes
A discrete Petri net model for cephalostatin-induced apoptosis in leukemic cells
Foreword: asynchronous cellular automata and applications
On spiking neural P systems
Evolved synaptic delay based neural controllers for walking patterns in hexapod robotic structures
Synthetic biology of cell signaling
Error-correcting Petri nets
Characterizing languages of polymorphic P systems by parallel communicating Lindenmayer systems
On the complexity of nonuniform wavelength-based machine
Communication based dynamic role allocation in a group of homogeneous robots
On the hierarchy of conservation laws in a cellular automaton
On the complexity of graph self-assembly in accretive systems
Editorial for special issue on unconventional computation
Quantum computation and cryptography: an overview
A synthetic biology approach to bio-chem-ICT: first moves towards chemical communication between synthetic and natural cells
On how the computational paradigm can help us to model and interpret the neural function
Pure reaction automata
A Study on the use of "self-generation" in memetic algorithms
Improving 5 G base station placement through precise rooftop detection using super-resolution diffusion models and satellite image analysis
A self-adaptive multi-population differential evolution algorithm
Erratum to: Computing maximal and minimal trap spaces of Boolean networks
A DNA based molecular logic gate capable of a variety of logical operations
A genetic algorithm for the Zen Puzzle Garden game
Orientation contrast sensitive cells in primate V1 a computational model
Design of a biomolecular device that executes process algebra
Investigating particle swarm optimization and various mobility algorithms for autonomous navigation in flying ad-hoc networks
Modelling biological processes by using a probabilistic P system software
Why 'GSA: a gravitational search algorithm' is not genuinely based on the law of gravity
Quadratic interpolation based orthogonal learning particle swarm optimization algorithm
Enhancing differential evolution algorithm through a population size adaptation strategy
Probability 1 computation with chemical reaction networks
Semi-supervised learning for question classification in CQA
Optimal shape design of an autonomous underwater vehicle based on multi-objective particle swarm optimization
Multi-objective evolutionary for synthetic aperture radar image segmentation with non-local means denoising
From reaction-diffusion to Physarum computing
Cellular automata rules solving the wireless sensor network coverage problem
A pattern-driven solution for designing multi-objective evolutionary algorithms
Simulating a burnt-bridges DNA motor with a coarse-grained DNA model
Evolutionary mechanics: new engineering principles for the emergence of flexibility in a dynamic and uncertain world
Online control of enumeration strategies via bat algorithm and black hole optimization
Doubler and linearizer: an approach toward a unified theory for molecular computing based on DNA complementarity
Remarks on the cellular automaton global synchronisation problem: deterministic versus stochastic models
A population-based clustering technique using particle swarm optimization and k-means
Iterative arrays with self-verifying communication cell
Priming: making the reaction to intrusion or fault predictable
Correction: Cellular automata simulations of the sintering behavior of ceramics driven by surface energy reduction
Computational graph pangenomics: a tutorial on data structures and their applications
Realizations of quantum computing using optical manipulations of atoms
Prescribed teams of insertion and deletion rules working on different objects
MOEA/D with gradient-enhanced kriging for expensive multiobjective optimization
Spatial search using the discrete time quantum walk
Cellular automata on group sets and the uniform Curtis-Hedlund-Lyndon theorem
Classifying Metaheuristics: Towards a unified multi-level classification system
An evolutionary approach for achieving scalability with general regression neural networks
Partition based real-valued encoding scheme for evolutionary algorithms
A proposal for tuning the α parameter in C α C-integrals for application in fuzzy rule-based classification systems
Dominance and deficiency for Petri nets and chemical reaction networks
Preface to the Special Issue Unconventional Computing 2008
Light-based string matching
Reversible causal graph dynamics: invertibility, block representation, vertex-preservation
Emergence of synchronicity in a self-organizing spiking neuron network: an approach via genetic algorithms
Computation with finite stochastic chemical reaction networks
Representation before computation
Simplifying the role of signals in tile self-assembly
Cooperative linear cargo transport with molecular spiders
Visualizations for rule-based machine learning
The computational power of cell division in P systems: Beating down parallel computers?
Integrative connectionist learning systems inspired by nature: current models, future trends and challenges
Expanding the landscape of biological computation with synthetic multicellular consortia
Modernizing quantum annealing II: genetic algorithms with the inference primitive formalism
A memetic algorithm for restoring feasibility in scheduling with limited makespan
Asynchronous, finite dynamical systems
Generation of classification trees from variable weighted features
Natural strategies for search
Quantum value indefiniteness
Goal distance estimation for automated planning using neural networks and support vector machines
Algorithmic applications of XPCR
Task-oriented hierarchical control architecture for swarm robotic system
Search space reduction of asynchrony immune cellular automata
Solving subset sum by spiking neural P systems with astrocytes producing calcium
A renewable, modular, and time-responsive DNA circuit
Knowledge representation of motor activity of patients with Parkinson's disease
On the minimal number of generators of endomorphism monoids of full shifts
Characterizations of some classes of spiking neural P systems
An all-optical soliton FFT computational arrangement in the 3NLSE-domain
Computing with energy and chemical reactions
First steps on asynchronous lattice-gas models with an application to a swarming rule
Retrovirus-based computer
Filling gaps in simulation of complex systems: the background and motivation for CoSMoS
Modelling programmed frameshifting with frameshift machines
Effect of parent selection and sibling rivalry on building-block assembly
On three new approaches to handle constraints within evolution strategies
The effect of jumping modes on various automata models
Optical solution for hard on average #P-complete instances (using exponential space for solving instances of the permanent)
In vitro selection of non-crosshybridizing oligonucleotides for computation
On an integrated approach to resilient transportation systems in emergency situations
Solving quantum circuit compilation problem variants through genetic algorithms
Affine continuous cellular automata solving the fixed-length density classification problem
Self-assembly of decidable sets
Sequentializing cellular automata
Influences on the formation and evolution of Physarum polycephalum inspired emergent transport networks
Information processing with structured excitable medium
Signal transmission across tile assemblies: 3D static tiles simulate active self-assembly by 2D signal-passing tiles
On the computational power of insertion-deletion systems
On modeling contention for shared caches in multi-core processors with techniques from ecology
The representational entity in physical computing
DNA splicing: computing by observing
Anytime pack search
Self-assembly of shapes at constant scale using repulsive forces
Quantitative evaluation of time-dependent Petri nets and applications to biochemical networks
A review of the nondeterministic waiting time algorithm
Petri net representation of multi-valued logical regulatory graphs
Networks of evolutionary processors: computationally complete normal forms
Clustering with Gödel numbering and decimal first degree cellular automata
Process calculi for biological processes
Physarum in silicon: the Greek motorways study
A study on learning robustness using asynchronous 1D cellular automata rules
Ensemble particle swarm optimization and differential evolution with alternative mutation method
Unexpected universality results for three classes of P systems with symport/antiport
Unravel four hairpins!
Enforcing logical delays in DNA computing systems
Population aggregation based on fitness
New measures for comparing optimization algorithms on dynamic optimization problems
Electrostatic field framework for supervised and semi-supervised learning from incomplete data
Turing patterns with Turing machines: emergence and low-level structure formation
Compositional and holistic quantum computational semantics
A general framework for enhancing relaxed Pareto dominance methods in evolutionary many-objective optimization
Effectiveness of new Multiple-PSO based Membrane Optimization Algorithms on CEC 2014 benchmarks and Iris classification
Evolutionary computation approaches to the Curriculum Sequencing problem
A genome analysis based on repeat sharing gene networks
Logic circuits from zero forcing
On the right combination of altruism and randomness in the motion of homogeneous distributed autonomous agents
Non conventional computing and constraint optimization
An evolutionary procedure for inferring MP systems regulation functions of biological networks
Particle computation: complexity, algorithms, and logic
The evidence for neural information processing with precise spike-times: A survey
A new multi-stage perturbed differential evolution with multi-parameter adaption and directional difference
Computing with planar toppling domino arrangements
The combinatorics of modeling and analyzing biological systems
All optical half adder and subtractor using single 2D photonic crystal structure
About block-parallel Boolean networks: a position paper
Model complexity control and statistical learning theory
Complexity classes in models of cellular computing with membranes
Cold dynamics in cellular automata: a tutorial
On the universality of peptide computing
A framework for machine learning based on dynamic physical fields
A Petri net representation of Bayesian message flows: importance of Bayesian networks for biological applications
Modelling and evaluating restricted ESNs on single- and multi-timescale problems
Impossibility of strict assembly of infinite fractals by oritatami
Experimental validation and optimization of signal dependent operation in whiplash PCR
Complexity aspects of polarizationless membrane systems
Mapping non-conventional extensions of genetic programming
Computational complexity and pragmatic solutions for flexible tile based DNA self-assembly
Solving subset sum and SAT problems by reaction systems
Analyzing randomness effects on the reliability of exploratory landscape analysis
Absolute versus stochastic stability of the artificial bee colony in synchronous and sequential modes
Extended spiking neural P systems with white hole rules and their red-green variants
Improved DNA-sticker arithmetic: tube-encoded-carry, Logarithmic Number System and Monte-Carlo methods
Reaction mining for reaction systems
Scheduling for airport baggage transport vehicles based on diversity enhancement genetic algorithm
A symmetric key cryptosystem and hardware encryption module using non-linear reversible cellular automata
Proving new directed tile complexity lower bounds at temperature 1 by folding between 2D and just-barely 3D self-assembly
Adaptive niche quantum-inspired immune clonal algorithm
Shoreline evolution: GIS, remote sensing and cellular automata modelling
Quantum Cryptography II: How to re-use a one-time pad safely even if P=NP
Solving problems with natural computing
Discrete and continuous optimization based on multi-swarm coevolution
A survey of cellular automata: types, dynamics, non-uniformity and applications
Erratum to: A multi-objective optimization method based on discrete bacterial algorithm for environmental/economic power dispatch
A DNA Superstructure-based Replicator without Product Inhibition
Fermat's last theorem and chaoticity
Computational limitations of affine automata and generalized affine automata
Artificial immune systems - today and tomorrow
Solving two-dimensional cutting stock problem via a DNA computing algorithm
Energy-aware cooperative multi-fitness evolutionary algorithm for workflow scheduling in cloud computing
Precise makespan optimization via hybrid genetic algorithm for scientific workflow scheduling problem
Design of an artificial functional nanomaterial with high recognition ability
Glider automorphisms and a finitary Ryan's theorem for transitive subshifts of finite type
Ranks of functions specified by minimal reaction systems and induced by images of singletons
Multiplying with DNA
Multiobjective sorting-based learning particle swarm optimization for continuous optimization
DNA-based algorithms for learning Boolean formulae
Solving combinatorial optimisation problems using oscillator based Ising machines
GTVcut for neuro-radiosurgery treatment planning: an MRI brain cancer seeded image segmentation method based on a cellular automata model
Solving the subset-sum problem with a light-based device
Population-induced phase transitions and the verification of chemical reaction networks
Padlock probe-mediated qRT-PCR for DNA computing answer determination
Protein structure prediction in an atomic model with differential evolution integrated with the crowding niching method
KLN, a new biological koniocortex based unsupervised neural network: competitive results on credit scoring
Lattice-based versus lattice-free individual-based models: impact on coexistence in competitive communities
Statistical thermodynamic analysis and designof DNA-based computers
Granular computing in mosaicing of images from capsule endoscopy
Hairpin-based state machine and conformational addressing: Design and experiment
Parallel pairwise operations on data stored in DNA: sorting, XOR, shifting, and searching
Forbidding and enforcing in membrane computing
A genetic algorithm for job-shop scheduling with operators enhanced by weak Lamarckian evolution and search space narrowing
Scaled pier fractals do not strictly self-assemble
Classifiers that approximate functions
Bounded noises as a natural tool to model extrinsic fluctuations in biomolecular networks
Codeword design and information encoding in DNA ensembles
Iterative arrays with finite inter-cell communication
Scalable almost-linear dynamical Ising machines
Face illumination normalization based on generative adversarial network
Optical SuperComputing: Preface to special issue
The busy beaver game for reaction systems
Theoretical and computational properties of transpositions
Goal-directed navigation based on path integration and decoding of grid cells in an artificial neural network
Adaptation, anticipation and rationality in natural and artificial systems: computational paradigms mimicking nature
A review of message passing algorithms in estimation of distribution algorithms
A particle swarm optimization based memetic algorithm for dynamic optimization problems
Cellular automata modelling of slime mould actin network signalling
An analysis of the relative effects of connectivity and coupling interactions on spin networks emulating the D-Wave 2000Q quantum annealer
Isothermal reactivating Whiplash PCR for locally programmable molecular computation
A Design for Cellular Evolutionary Computation by using Bacteria
Application of a breeder genetic algorithm for filter optimization
A new problem for rule following
Data classification using reversible decimal first-degree cellular automata
Spiking neural P systems with extended rules: universality and languages
Experimental multipartner quantum communication complexity employing just one qubit
A class of discrete dynamical systems with properties of both cellular automata and L-systems
m-Asynchronous cellular automata: from fairness to quasi-fairness
On the universality of purely catalytic P systems
A framework for designing of genetic operators automatically based on gene expression programming and differential evolution
Biocircuit design through engineering bacterial logic gates
Investigations on the power of matrix insertion-deletion systems with small sizes
Foreword: asynchronous behavior of cellular automata and discrete models
Self-assembly of 3-D structures using 2-D folding tiles
On codeword design in metric DNA spaces
Algorithms for maximal existential and universal width
Best approximations of fitness functions of binary strings
Parallel predator-prey interaction for evolutionary multi-objective optimization
A proposal of quantum data representation to improve the discrimination power
Evolution strategies with cumulative step length adaptation on the noisy parabolic ridge
Self-assembling DNA graphs
Algorithms for testing that sets of DNA words concatenate without secondary structure
A photosynthetic process modelled by a metabolic P system
Solving the non-unicost set covering problem by using cuckoo search and black hole optimization
A cognitive-inspired algorithm for growing networks
Lower bounds on the computational power of an optical model of computation
Swarm intelligence: the state of the art special issue of natural computing
P X systems = P systems + X machines
Fractal dimension of assemblies in the abstract tile assembly model
3D Fractal DNA Assembly from Coding, Geometry and Protection
On computing the Lyapunov exponents of reversible cellular automata
Towards collaborative feature extraction for face recognition
Computation with multiple CTCs of fixed length and width
Computing with biological switches and clocks
Hierarchies and undecidability results for iterative arrays with sparse communication
Influence of cell mechanics and proliferation on the buckling of simulated tissues using a vertex model
Optimal staged self-assembly of linear assemblies
A comparison of multi-objective optimization algorithms for weight setting problems in traffic engineering
Customizable execution environments for evolutionary computation using BOINC + virtualization
Distinguishing genelet circuit input pulses via a pulse detector
On the generative capacity of matrix insertion-deletion systems of small sum-norm
Conserved quantities in discrete dynamics: what can be recovered from Noether's theorem, how, and why?
Modeling NP-problems with families of extended graph-based reaction systems
Ecological effects of cellular computing in microbial populations
Small networks of polarized splicing processors are universal
Evolving the process of a virtual composer
Development, evaluation and benchmarking of simulation software for biomolecule-based computing
Involution codes: with application to DNA coded languages
Editorial for special issue on the interaction between computation and biology
Morphogenetic computing: computability and complexity results
An ensemble evolutionary constraint-based approach to understand the emergence of metabolic phenotypes
Non-conventional computing paradigms
The alchemy of computation: designing with the unknown
Bayesian versus data driven model selection for microarray data
Biomolecular swarms - an agent-based model of the lactose operon
Biocomputing: an insight from linguistics
Symbol representations and signal dynamics in evolving droplet computers
Distributed agreement in tile self-assembly
Topological Active Volume 3D segmentation model optimized with genetic approaches
Is integration of mechanisms a way to enhance a nature-inspired algorithm?
Quantum ant colony optimization algorithm for AGVs path planning based on Bloch coordinates of pheromones
A self-adaptive communication strategy for flocking in stationary and non-stationary environments
Error suppression mechanisms for DNA tile self-assembly and their simulation
Petri nets for modelling metabolic pathways: a survey
Democratic, existential, and consensus-based output conventions in stable computation by chemical reaction networks
On reverse engineering in the cognitive and brain sciences
Physical modeling of biomolecular computers: Models, limitations, and experimental validation
Gauge-invariance in cellular automata
Activatable tiles for compact robust programmable molecular assembly and other applications
A GIS-aided cellular automata system for monitoring and estimating graph-based spread of epidemics
Trace monoids with idempotent generators and measure-only quantum automata
Koopman-based data-driven soft artificial life: obtaining rulesets from observed data
Adaptive multimeme algorithm for flexible job shop scheduling problem
Strand algebras for DNA computing
System reduction: an approach based on probabilistic cellular automata
Communication complexity meets cellular automata: Necessary conditions for intrinsic universality
Flows in micro fluidic networks: From theory to experiment
Oblivious transfer and quantum channels as communication resources
Watson-Crick palindromes in DNA computing
Polyomino-safe DNA self-assembly via block replacement
CA-NN: a cellular automata neural network for handwritten pattern recognition
The fractal geometry of fitness landscapes at the local optima level
Engineering signal processing in cells: Towards molecular concentration band detection
Top-Down modulation of neural responses in visual perception: a computational exploration
Using transition systems to describe and predict the behaviour of structured excitable media