yusuke1997/dblp-id-title huggingface dataset:
New mobile communication system design for Rayleigh environments based on compressed sensing-source coding
Antenna selection for N R-STAR- M QAM spatial modulation
Interference exploitation using adaptive code allocation for the downlink of precoded multiple carrier code division multiple access systems
Unequal error protection transmission for federated learning
Joint complex regularised zero-forcing equalisation and CFO compensation for MIMO SC-FDMA systems
Editorial Wireless Mobile Networks: Cross-Layer Communication
Intrusion damage assessment for multi-stage attacks for clouds
Trade-offs between the quality of service, computational cost and cooling complexity in interference-dominated multi-user SDMA systems
Adaptive handover scheme for evolved multimedia broadcast multicast services in long-term evolution networks
Energy-efficient scheduling and power control via stochastic network optimisation in cognitive radio networks
Analysis of LDPC code in the FH system with partial-band interference
Throughput maximisation by optimising detection thresholds in full-duplex cognitive radio networks
Design and implementation of a wideband channel emulation platform for 5G mmWave vehicular communication
Opportunistic relaying with analogue and digital network coding for two-way parallel relay network
Low complexity scheme for carrier frequency offset estimation in orthogonal frequency division multiple access uplink
Reliability-based decision fusion scheme for cooperative spectrum sensing
Approximate expressions for BER performance in downlink mmWave MU-MIMO hybrid systems with different data detection approaches
Physical layer security in massive internet of things: delay and security analysis
Multi-hop relaying systems in the presence of co-channel interference over Nakagami-m fading channels
Reliable routing for low-power smart space communications
Adaptive second-order control of transmitter power in wireless communication systems
Performance analysis of free-space optical communication systems over atmospheric turbulence channels
Optimizing secure power allocation in massive MIMO systems with an eavesdropper under imperfect CSI conditions
Blind channel estimation, equalisation and CRB for OFDM with unmodelled interference
Blind interference alignment tracking for two-way interference channel
Real-time driving style classification based on short-term observations
Cramer-Rao lower bound for non-data-aided carrier phase estimation from general M-ary phase-shift keying modulation signals over flat Rayleigh fading channel
Survey of automatic modulation classification techniques: classical approaches and new trends
Channel prediction in non-regenerative multi-antenna relay selection systems
Effective adaptive virtual queue: a stabilising active queue management algorithm for improving responsiveness and robustness
Saturation throughput analysis of WAVE networks in Doppler spread scenarios
Robust secure transmission for wireless information and power transfer in heterogeneous networks
Indoor passive localisation based on reliable CSI extraction
Block spreading CDMA system: a simplified scheme using despreading before equalisation for broadband uplink transmission
Adaptive authentication scheme for mobile devices in proxy MIPv6 networks
MIRATE: MIps RATional dEsign Science Gateway
The SuBliMinaL Toolbox: automating steps in the reconstruction of metabolic networks
Network integration of data and analysis of oncology interest
Predicting protein distance maps according to physicochemical properties
CASSys: an integrated software-system for the interactive analysis of ChIP-seq data
Analysis of high-throughput plant image data with the information system IAP
Designing an optimized theta-defensin peptide for HIV therapy using in-silico approaches
Jllumina - A comprehensive Java-based API for statistical Illumina Infinium HumanMethylation450 and MethylationEPIC data processing
Modular analysis of gene networks by linear temporal logic
SBML Level 3 package: Multistate, Multicomponent and Multicompartment Species, Version 1, Release 1
Exploring animal behaviour multilayer networks in immersive environments - a conceptual framework
Omics Data Complementarity Underlines Functional Cross-Communication in Yeast
A Model of Phospholipid Biosynthesis in Tumor in Response to an Anticancer Agent in Vivo
Study of the triplet periodicity phase shifts in genes
Goober: A fully integrated and user-friendly microarray data management and analysis solution for core labs and bench biologists
The OXL format for the exchange of integrated datasets
SABIO-RK: A data warehouse for biochemical reactions and their kinetics
Computer and Statistical Analysis of Transcription Factor Binding and Chromatin Modifications by ChIP-seq data in Embryonic Stem Cell
Towards a Consistent, Quantitative Evaluation of MicroRNA Evolution
OpenLabNotes - An Electronic Laboratory Notebook Extension for OpenLabFramework
A Rational Framework for Production Decision Making in Blood Establishments
Feature Fusion Based SVM Classifier for Protein Subcellular Localization Prediction
Improving the performance of Transposable Elements detection tools
Automatic curation of LTR retrotransposon libraries from plant genomes through machine learning
An Ontology for Description of Drug Discovery Investigations
BioModelKit - An Integrative Framework for Multi-Scale Biomodel-Engineering
Synthetic Biology Open Language (SBOL) Version 2.3
Cell - extracellular matrix interaction in glioma growth. In silico model
Discovery of miR-mRNA interactions via simultaneous Bayesian inference of gene networks and clusters using sequence-based predictions and expression data
BN++ - A Biological Information System
MakeSBML: a tool for converting between Antimony and SBML
Mining for Single Nucleotide Polymorphisms in Expressed Sequence Tags
Predicting Genes Involved in Human Cancer Using Network Contextual Information
Complementarity of network and sequence information in homologous proteins
Sustainable software development in science - insights from 20 years of Vanted
Integrative Analysis of Co-Morbid Multifactorial Diseases
Global sequence properties for superfamily prediction: a machine learning approach
Defining Mapping Mashups with BioXMash
Geno2proteo, a Tool for Batch Retrieval of DNA and Protein Sequences from Any Genomic or Protein Regions
Structural relation matching: an algorithm to identify structural patterns into RNAs and their interactions
Modeling and Simulating the Aerobic Carbon Metabolism of a Green Microalga Using Petri Nets and New Concepts of VANESA
A review on methods for predicting miRNA-mRNA regulatory modules
SnakeLines: integrated set of computational pipelines for sequencing reads
STARGATE-X: a Python package for statistical analysis on the REACTOME network
ExPlanes: Exploring Planes in Triplet Data
Synthetic biology open language (SBOL) version 3.1.0
Evaluating molecular representations in machine learning models for drug response prediction and interpretability
BioSankey: Visualization of Microbial Communities Over Time
Achieving k-anonymity in DataMarts used for gene expressions exploitation
clubber: removing the bioinformatics bottleneck in big data analyses
Comparative miRomics of Salt-Tolerant and Salt-Sensitive Rice
CIDA: An integrated software for the design, characterisation and global comparison of microarrays
The implications for Bioinformatics of integration across physical scales
SBMLToolkit.jl: a Julia package for importing SBML into the SciML ecosystem
Geometric approach to string analysis for biosequence classification
An integrated dataset for in silico drug discovery
Super-rapid race for saving lives by developing COVID-19 vaccines
Rapid development of proteomic applications with the AIBench framework
Space-time dynamics of Stem Cell Niches: a unified approach for Plants
Systems Biology Graphical Notation: Entity Relationship language Level 1 Version 2
Systems biology graphical notation markup language (SBGNML) version 0.3
Automatic knowledge extraction in sequencing analysis with multiagent system and grid computing
Retraction: Towards Prediction and Prioritization of disease genes by the modularity of human phenome-genome assembled network
MetHouse: Raw and Preprocessed Mass Spectrometry Data
A Two-Step Clustering for 3-D Gene Expression Data Reveals the Main Features of the Arabidopsis Stress Response
Probabilistic Latent Semantic Analysis Applied to Whole Bacterial Genomes Identifies Common Genomic Features
Functional classification of transcription factor binding sites: information content as a metric
VANESA - A Software Application for the Visualization and Analysis of Networks in System Biology Applications
Synthetic Biology Open Language Visual (SBOL Visual) Version 2.0
Putting Encyclopaedia Knowledge into Structural Form: Finite State Transducers Approach
On the border of the amyloidogenic sequences: prefix analysis of the parallel beta sheets in the PDB_Amyloid collection
Frequency Analysis of the Splice Site Regions in Different Organisms
Petri net modeling and simulation of post-transcriptional regulatory networks of human embryonic stem cell (hESC) differentiation to cardiomyocytes
Prediction of protein-protein interactions using one-class classification methods and integrating diverse biological data
Statistical Embedding in Complex Biosystems
The simulation experiment description markup language (SED-ML): language specification for level 1 version 4
A Lock Free Approach To Parallelize The Cellular Potts Model: Application To Ductal Carcinoma In Situ
Concentration of inverted repeats along human DNA
An evaluation study of biclusters visualization techniques of gene expression data
BacillOndex: An Integrated Data Resource for Systems and Synthetic Biology
Automatic extraction of microorganisms and their habitats from free text using text mining workflows
METU-SNP: An Integrated Software System for SNP-Complex Disease Association Analysis
Systems Biology Graphical Notation: Process Description language Level 1 Version 2.0
Systems Biology Markup Language (SBML) Level 2 Version 5: Structures and Facilities for Model Definitions
Integrating Phenotypic Data For Depression
Digital Biomass Accumulation Using High-Throughput Plant Phenotype Data Analysis
The Systems Biology Markup Language (SBML): Language Specification for Level 3 Version 1 Core
Gene-network based analysis of human placental trophoblast subtypes identifies critical genes as potential targets of therapeutic drugs
Using Gene networks to drug target identification
Specifications of Standards in Systems and Synthetic Biology: Status and Developments in 2017
Ontology-assisted database integration to support natural language processing and biomedical data-mining
BASIS: an internet resource for network modelling
Integrative Gene Selection on Gene Expression Data: Providing Biological Context to Traditional Approaches
Functional diversity within protein superfamilies
Searching for ncRNAs in eukaryotic genomes: Maximizing biological input with RNAmotif
WIBL: Workbench for Integrative Biological Learning
On the parameter optimization of Support Vector Machines for binary classification
UV-Vis and CIELAB Based Chemometric Characterization of Manihot esculenta Carotenoid Contents
An assessment of machine and statistical learning approaches to inferring networks of protein-protein interactions
Differential Expression of Hyperhydricity Responsive Peach miRNAs
Tracking T and B cells from two-photon microscopy imaging using constrained SMC clusters
Co-creation environment with cloud virtual reality and real-time artificial intelligence toward the design of molecular robots
Community-wide collaboration is a must to reinstall trust in bioinformatics solutions and biomedical interpretation
Integrating Sequence Analysis with Biophysical Modelling for Accurate Transcription Start Site Prediction
Identification of Missing Carbon Fixation Enzymes as Potential Drug Targets in Mycobacterium Tuberculosis
Specifications of Standards in Systems and Synthetic Biology: Status and Developments in 2016
Machine Learning approach to discriminate Saccharomyces cerevisiae yeast cells using sophisticated image features
Data literacy in genome research
Web application for automatic prediction of gene translation elongation efficiency
Integrated simultaneous analysis of different biomedical data types with exact weighted bi-cluster editing
Discovering NDM-1 inhibitors using molecular substructure embeddings representations
Reactome: An integrated expert model of human molecular processes and access toolkit
Efficient mapping of genomic sequences to optimize multiple pairwise alignment in hybrid cluster platforms
GITIRBio: A Semantic and Distributed Service Oriented-Architecture for Bioinformatics Pipeline
Prognostic Prediction through Biclustering-Based Classification of Clinical Gene Expression Time Series
miRquant 2.0: an Expanded Tool for Accurate Annotation and Quantification of MicroRNAs and their isomiRs from Small RNA-Sequencing Data
Clustering of gene expression profiles: creating initialization-independent clusterings by eliminating unstable genes
Colon cancer survival prediction from gland shapes within histology slides using deep learning
A First Step towards Learning which uORFs Regulate Gene Expression
Conservation of the LexA repressor binding site in Deinococcus radiodurans
IMS2 - An integrated medical software system for early lung cancer detection using ion mobility spectrometry data of human breath
Dynamic Load Balancing Strategy for Parallel Tumor Growth Simulations
Federated machine learning for a facilitated implementation of Artificial Intelligence in healthcare - a proof of concept study for the prediction of coronary artery calcification scores
Reconstruction of the regulatory hypermethylation network controlling hepatocellular carcinoma development during hepatitis C viral infection
Generalized Correlation Coefficient for Non-Parametric Analysis of Microarray Time-Course Data
SNPRanker: a tool for identification and scoring of SNPs associated to target genes
Integrative Visual Analysis of the Effects of Alternative Splicing on Protein Domain Interaction Networks
Developmental Anatomy Ontology of Zebrafish: an Integrative semantic framework
Synthetic Biology Open Language (SBOL) Version 2.1.0
MCMVDRP: a multi-channel multi-view deep learning framework for cancer drug response prediction
Targeted Projection Pursuit Tool for Gene Expression Visualisation
miReg: a resource for microRNA regulation
Integration of -omics data and networks for biomedical research with VANTED
Clustering of Biological Datasets in the Era of Big Data
Towards a more accurate and reliable evaluation of machine learning protein-protein interaction prediction model performance in the presence of unavoidable dataset biases
Synthetic Biology Open Language (SBOL) Version 2.0.0
Design X Bioinformatics: a community-driven initiative to connect bioinformatics and design
Novel Developments of the MetaCrop Information System for Facilitating Systems Biological Approaches
A novel gene expression test method of minimizing breast cancer risk in reduced cost and time by improving SVM-RFE gene selection method combined with LASSO
Exceptional single strand DNA word symmetry: analysis of evolutionary potentialities
Duplicate detection of 2D-NMR Spectra
Systematic assessment of template-based genome-scale metabolic models created with the BiGG Integration Tool
Computational Approaches to Identify Genetic Interactions for Cancer Therapeutics
Mental-Map Preserving Visualisation of Partitioned Networks in Vanted
Noise tolerance of Multiple Classifier Systems in data integration-based gene function prediction
Predicting and Designing Epitope Ensemble Vaccines against HTLV-1
JIB.tools 2.0 - A Bioinformatics Registry for Journal Published Tools with Interoperability to bio.tools
KaIDA: a modular tool for assisting image annotation in deep learning
A systematic study of motif pairs that may facilitate enhancer-promoter interactions
Systems Biology Markup Language (SBML) Level 3 Package: Distributions, Version 1, Release 1
Mapping protein information to disease terminologies
MoRAine - A web server for fast computational transcription factor binding motif re-annotation
A Graphical Notation to describe the Logical Interactions of Biological Pathways
Leveraging transformers for semi-supervised pathogenicity prediction with soft labels
Identifying Transcription Regulatory Elements in the Human and Mouse Genomes Using Tissue-specific Gene Expression Profiles
Construction of coffee transcriptome networks based on gene annotation semantics
GeneBrowser: an approach for integration and functional classification of genomics data
GMB: An Efficient Query Processor for Biological Data
Bio-Search Computing: Integration and global ranking of bioinformatics search results
Deep Convolutional Neural Networks for the Prediction of Molecular Properties: Challenges and Opportunities Connected to the Data
BIOPYDB: A Dynamic Human Cell Specific Biochemical Pathway Database with Advanced Computational Analyses Platform
Ensemble Clustering Classification compete SVM and One-Class classifiers applied on plant microRNAs Data
Converting Biomolecular Modelling Data Based on an XML Representation
Assessing Public Metabolomics Metadata, Towards Improving Quality
A Relational Learning Approach to Structure-Activity Relationships in Drug Design Toxicity Studies
Non-Coding RNAs and their Integrated Networks
Randomization Strategies Affect Motif Significance Analysis in TF-miRNA-Gene Regulatory Networks
Differentially methylated CpG sites associated with the high-risk group of prostate cancer
Towards prediction and prioritization of disease genes by the modularity of human phenome-genome assembled network
Biological Big Bytes: Integrative Analysis of Large Biological Datasets
Analysis of integrated biomolecular networks using a generic network analysis suite
Simulation Experiment Description Markup Language (SED-ML) Level 1 Version 3 (L1V3)
InSilico Proteomics System: Integration and Application of Protein and Protein-Protein Interaction Data using Microsoft .NET
GenCoNet - A Graph Database for the Analysis of Comorbidities by Gene Networks
Visual Understanding of Metabolic Pathways Across Organisms Using Layout in Two and a Half Dimensions
Taxonomic and functional metagenomic analysis of anodic communities in two pilot-scale microbial fuel cells treating different industrial wastewaters
Simulated Cell Division Processes of the Xenopus Cell Cycle Pathway by Genomic Object Net
Dynamics of miRNA biogenesis and nuclear transport
PetriScape - A plugin for discrete Petri net simulations in Cytoscape
Modified HuffBit Compress Algorithm - An Application of R
Gene Expression Studies to Identify Significant Genes in AR, MTOR, MAPK Pathways and their Overlapping Regulatory Role in Prostate Cancer
Extracting kinetic information from literature with KineticRE
GOblet: Annotation of anonymous sequence data with Gene Ontology and Pathway terms
A device and an app for the diagnosis and self-management of tinnitus
Discovery and Annotation of Plant Endogenous Target Mimicry Sequences from Public Transcriptome Libraries: A Case Study of Prunus persica
MinOmics, an Integrative and Immersive Tool for Multi-Omics Analysis
Synthetic Biology Open Language Visual (SBOL Visual) Version 2.1
Fungal metabarcoding data integration framework for the MycoDiversity DataBase (MDDB)
An evaluation of the performance of three semantic background knowledge sources in comparative anatomy
A Model Integration Pipeline for the Improvement of Human Genome-Scale Metabolic Reconstructions
ADOPS - Automatic Detection Of Positively Selected Sites
Application of Artificial Intelligence or machine learning in risk sharing agreements for pharmacotherapy risk management
The CellML Metadata Framework 2.0 Specification
Analysing Microarray Data using the Multi-functional Immune Ontologiser
Comparison of Optimization-Modelling Methods for Metabolites Production in Escherichia coli
Inferences on the evolution of the ascorbic acid synthesis pathway in insects using Phylogenetic Tree Collapser (PTC), a tool for the automated collapsing of phylogenetic trees using taxonomic information
RNA-Seq Mouse Brain Regions Expression Data Analysis: Focus on ApoE Functional Network
Open modeling and exchange (OMEX) metadata specification version 1.0
Discrimination of Brazilian propolis according to the seasoning using chemometrics and machine learning based on UV-Vis scanning data
Integrating Genomic and Proteomic Data: The Integr8 Project
An overview of machine learning and deep learning techniques for predicting epileptic seizures
The Systems Biology Markup Language (SBML): Language Specification for Level 3 Version 2 Core
Application of machine learning approach in emergency department to support clinical decision making for SARS-CoV-2 infected patients
A ViTUNeT-based model using YOLOv8 for efficient LVNC diagnosis and automatic cleaning of dataset
Identifying interactions between chemical entities in biomedical text
MILAN - A medical information-system linking agents to metabolic networks
Programmatic Access to FAIRified Digital Plant Genetic Resources
Design - a new way to look at old molecules
SBML Level 3 package: Render, Version 1, Release 1
A New Approach for Modelling Gene Regulatory Networks Using Fuzzy Petri Nets
Key2Ann: a tool to process sequence sets by replacing database identifiers with a human-readable annotation
LmTDRM Database: A Comprehensive Database on Thiol Metabolic Gene/Gene Products in Listeria monocytogenes EGDe
Comparison and Integration of Target Prediction Algorithms for microRNA Studies
The Systems Biology Markup Language (SBML): Language Specification for Level 3 Version 2 Core Release 2
Modelling Proteolytic Enzymes With Support Vector Machines
WebStruct and VisualStruct: web interfaces and visualization for Structure software implemented in a cluster environment
Molecular Relationships between Bronchial Asthma and Hypertension as Comorbid Diseases
MiRNA target enrichment analysis of co-expression network modules reveals important miRNAs and their roles in breast cancer progression
In silico studies of natural product-like caffeine derivatives as potential MAO-B inhibitors/AA 2A R antagonists for the treatment of Parkinson's disease
Study of NAD-interacting proteins highlights the extent of NAD regulatory roles in the cell and its potential as a therapeutic target
3D image and graph based Computation of Protein Surface
A flexible statistics web processing service - Added value for information systems for experiment data
Applying the Tuple Space-Based Approach to the Simulation of the Caspases, an Essential Signalling Pathway
LifeStyle-Specific-Islands (LiSSI): Integrated Bioinformatics Platform for Genomic Island Analysis
Predicting the possible effect of miR-203a-3p and miR-29a-3p on DNMT3B and GAS7 genes expression
UBioLab: a web-LABoratory for Ubiquitous in-silico experiments
Editorial - 20 years Journal of Integrative Bioinformatics
A Novel Method to Detect Bias in Short Read NGS Data
Semantics for an Integrative and Immersive Pipeline Combining Visualization and Analysis of Molecular Data
Predicting DDI-induced pregnancy and neonatal ADRs using sparse PCA and stacking ensemble approach
Synthetic biology open language visual (SBOL visual) version 3.0
Prediction of Primary Tumors in Cancers of Unknown Primary
Kinetic Modelling with the Systems Biology Modelling Environment SyBME
A Multi-Scale Modeling Concept and Computational Tools for the Integrative Analysis of Stationary Metabolic Data
Bioinformatics tools help molecular characterization of Perkinsus olseni differentially expressed genes
From Binary to Multivalued to Continuous Models: The Lac Operon as a Case Study
BioDWH2: an automated graph-based data warehouse and mapping tool
Reproductive potential of the male (RPM): the computer database of phenotypic and molecular genetic data for Russian men with impaired and normal fertility
SBML Level 3 package: Groups, Version 1 Release 1
The first 10 years of the international coordination network for standards in systems and synthetic biology (COMBINE)
Using Docker Compose for the Simple Deployment of an Integrated Drug Target Screening Platform
The Topology of the Growing Human Interactome Data