yusuke1997/dblp-id-title huggingface dataset:
AstronomicAL: an interactive dashboard for visualisation, integration and classification of data with Active Learning
GeophysicalModelGenerator.jl: A Julia package to visualise geoscientific data and create numerical model setups
ProgPy: Python Packages for Prognostics and Health Management of Engineering Systems
A Python Library for Pre- and Post-Processing of DAMASK Simulations
samgeo: A Python package for segmenting geospatial data with the Segment Anything Model (SAM)
CN-AeroModels: A C++ implementation of aerodynamic models for wind propulsion systems of cargo ships
FRIDGe: Fast Reactor Input Deck Generator
PySwarming: a research toolkit for Swarm Robotics
OrpailleCC: a Library for Data Stream Analysis on Embedded Systems
LightTwinSVM: A Simple and Fast Implementation of Standard Twin Support Vector Machine Classifier
BrightEyes-MCS: a control software for multichannel scanning microscopy
UPOsHam: A Python package for computing unstable periodic orbits in two-degree-of-freedom Hamiltonian systems
hdbscan: Hierarchical density based clustering
NoisySignalIntegration.jl: A Julia package for uncertainty evaluation of numeric integrals
Dimensionally Aligned Signal Projection Algorithms Library
surfinpy: A Surface Phase Diagram Generator
EISPAC - The EIS Python Analysis Code
FAT Forensics: A Python Toolbox for Implementing and Deploying Fairness, Accountability and Transparency Algorithms in Predictive Systems
spgrep: On-the-fly generator of space-group irreducible representations
PyGDH: Python Grid Discretization Helper
GCol: A High-Performance Python Library for Graph Colouring
OrNet - a Python Toolkit to Model the Diffuse Structure of Organelles as Social Networks
metrica: an R package to evaluate prediction performance of regression and classification point-forecast models
datasailr - An R Package for Row by Row Data Processing, Using DataSailr Script
Ethical Smart Grid: a Gym environment for learning ethical behaviours
target-methylseq-qc: a lightweight pipeline for collecting metrics from targeted sequence mapping files
lintsampler: Easy random sampling via linear interpolation
EWDM: A wavelet-based method for estimating directional spectra of ocean waves
RADWave: Python code for ocean surface wave analysis by satellite radar altimeter
Dynamax: A Python package for probabilistic state space modeling with JAX
GCIdentifier.jl: A Julia package for identifying molecular fragments from SMILES
nse: Computation of Numerical Standard Errors in R
sourmash v4: A multitool to quickly search, compare, and analyze genomic and metagenomic data sets
rFBP: Replicated Focusing Belief Propagation algorithm
pynucastro: an interface to nuclear reaction rates and code generator for reaction network equations
mhealthtools: A Modular R Package for Extracting Features from Mobile and Wearable Sensor Data
OpenEPSim: An Open Exclusion Process Simulation Tool
RustBCA: A High-Performance Binary-Collision-Approximation Code for Ion-Material Interactions
PyGMI - a python package for geoscience modelling and interpretation
VIVO: a system for research discovery
MDL Suite: A language, generator and compiler for describing mazes
mrivis: Medical image visualization library for neuroscience in python
Mobile Gaze Mapping: A Python package for mapping mobile gaze data to a fixed target stimulus
Netwulf: Interactive visualization of networks in Python
EvoDynamics.jl: a framework for modeling eco-evolutionary dynamics
ENZO: An Adaptive Mesh Refinement Code for Astrophysics (Version 2.6)
sam2lca: Lowest Common Ancestor for SAM/BAM/CRAM alignment files
MembraneAnalysis.jl: A Julia package for analyzing molecular dynamics simulations of lipid membranes
GNU Data Language 1.0: a free/libre and open-source drop-in replacement for IDL/PV-WAVE
SHARPy: A dynamic aeroelastic simulation toolbox for very flexible aircraft and wind turbines
finreportr: Financial Data from U.S. Securities and Exchange Commission
Ecological Metadata as Linked Data
EcoLogits: Evaluating the Environmental Impacts of Generative AI
HiddenMarkovModels.jl: generic, fast and reliable state space modeling
dia: An R package for the National Oceanic and Atmospheric Administration dam impact analysis
pyndl: Naïve Discriminative Learning in Python
nasapower: A NASA POWER Global Meteorology, Surface Solar Energy and Climatology Data Client for R
OnlineStats.jl: A Julia package for statistics on data streams
argopy: A Python library for Argo ocean data analysis
vbvs.concurrent: Fitting Methods for the Functional Linear Concurrent Model
StatAid: An R package with a graphical user interface for data analysis
BetaML: The Beta Machine Learning Toolkit, a self-contained repository of Machine Learning algorithms in Julia
Fundus Image Toolbox: A Python package for fundus image processing
HINA: A Learning Analytics Tool for Heterogenous Interaction Network Analysis in Python
ur-scape: harnessing data for stakeholder participation in city-making processes
Tenta: Remote and Real-Time Sensor Network Management
ordPens: An R package for Selection, Smoothing and Principal Components Analysis for Ordinal Variables
gridwxcomp: A Python package to evaluate and interpolate biases between station and gridded weather data
Nostril: A nonsense string evaluator written in Python
amisrsynthdata: A Python package for generating synthetic data for the Advanced Modular Incoherent Scatter Radars
ggeffects: Tidy Data Frames of Marginal Effects from Regression Models
ngsxfem: Add-on to NGSolve for geometrically unfitted finite element discretizations
GroundwaterDupuitPercolator: A Landlab component for groundwater flow
Minimalist And Customisable Optimisation Package
bleiglas: An R package for interpolation and visualisation of spatiotemporal data with 3D tessellation
memochange: An R package for estimation procedures and tests for persistent time series
SNEWPY: A Data Pipeline from Supernova Simulations to Neutrino Signals
gmm_diag and gmm_full: C++ classes for multi-threaded Gaussian mixture models and Expectation-Maximisation
NeuroCAPs: A Python Package for Performing Co-Activation Patterns Analyses on Resting-State and Task-Based fMRI Data
egobox, a Rust toolbox for efficient global optimization
PyKronecker: A Python Library for the Efficient Manipulation of Kronecker Products and Related Structures
DearEIS - A GUI program for analyzing impedance spectra
ezc3d: An easy C3D file I/O cross-platform solution for C++, Python and MATLAB
APCtools: Descriptive and Model-based Age-Period-Cohort Analysis
xrdfit: A Python package for fitting synchrotron X-ray diffraction spectra
MLxtend: Providing machine learning and data science utilities and extensions to Python's scientific computing stack
NodePy: A package for the analysis of numerical ODE solvers
'QuasinormalModes.jl': A Julia package for computing discrete eigenvalues of second order ODEs
Pymagicc: A Python wrapper for the simple climate model MAGICC
cfdm: A Python reference implementation of the CF data model
NMRInversions.jl, a Julia package for time-domain Nuclear Magnetic Resonance
TauFactor 2: A GPU accelerated python tool for microstructural analysis
eddy: Extracting Protoplanetary Disk Dynamics with Python
pyomeca: An Open-Source Framework for Biomechanical Analysis
KerrGeoPy: A Python Package for Computing Timelike Geodesics in Kerr Spacetime
Fraggler: A Python Package and CLI Tool for Automated Fragment Analysis
survxai: an R package for structure-agnostic explanations of survival models
quadkeyr: Tools for converting QuadKey-identified datasets (Microsoft's Bing Maps Tile System) into raster images and analyzing Meta (Facebook) Mobility Data
(py)oscode: fast solutions of oscillatory ODEs
NeuralHydrology - A Python library for Deep Learning research in hydrology
VRPy: A Python package for solving a range of vehicle routing problems with a column generation approach
NLSE: A Python package to solve the nonlinear Schrödinger equation
PyDMD: Python Dynamic Mode Decomposition
swift-emulator: A Python package for emulation of simulated scaling relations
Groupyr: Sparse Group Lasso in Python
excitingtools: An exciting Workflow Tool
swiftsimio: A Python library for reading SWIFT data
Fast and flexible simulation and parameter estimation for synthetic biology using bioscrape
yadg: yet another datagram
automata: A Python package for simulating and manipulating automata
SOAP: A Python Package for Calculating the Properties of Galaxies and Halos Formed in Cosmological Simulations
STEDY: Software for TEnsegrity DYnamics
REGENS: an open source Python package for simulating realistic autosomal genotypes
ArviZ a unified library for exploratory analysis of Bayesian models in Python
Pyra: Automated EM27/SUN Greenhouse Gas Measurement Software
Translational Informatics Management System (TIMS): Towards OMICS based clinical data management for long term curation of clinical studies
Hypothesis: A new approach to property-based testing
Fastsubtrees: simple and efficient subtrees extractions in Python with applications to NCBI taxonomy
AliNe: A Flexible and Efficient Nextflow Pipeline for Read Alignment
acronym: An Automatic Reduction Pipeline for Astronomical Images
aorsf: An R package for supervised learning using the oblique random survival forest
ModeCouplingTheory.jl: A solver for mode-coupling-theory-like integro-differential equations
REMix: A GAMS-based framework for optimizing energy system models
lpcde: Estimation and Inference for Local Polynomial Conditional Density Estimators
home2park: An R package to assess the spatial provision of urban parks
cblearn: Comparison-based Machine Learning in Python
gamut: A Geospatial R Package to Analyze Multisectoral Urban Teleconnections
Siril: An Advanced Tool for Astronomical Image Processing
QuantizedSystemSolver: A discontinuous ODE system solver in Julia
TSInterpret: A Python Package for the Interpretability of Time Series Classification
PyOrthanc: A Python Interface for Orthanc DICOM Servers
'hessQuik': Fast Hessian computation of composite functions
A MATLAB-based Instrument Control (MIC) package for fluorescence imaging
THzTools: data analysis software for terahertz time-domain spectroscopy
primerForge: a Python program for identifying primer pairs capable of distinguishing groups of genomes from each other
extendr: Frictionless bindings for R and Rust
cuIBM: a GPU-based immersed boundary method code
Pipengine: an ultra light YAML-based pipeline execution engine
STReNGTHS, a Python package to model and simulate complex reaction-diffusion systems
Estimating statistics from multi-state models using simulation with multistateutils
ActiSleep Tracker: a Python-based dashboard for adjusting automatic sleep predictions of actigraphy data
spant: An R package for magnetic resonance spectroscopy analysis
BenchmarkDataNLP.jl: Synthetic Data Generation for NLP Benchmarking
DIFFICE-jax: Differentiable neural-network solver for data assimilation of ice shelves in JAX
rmap: An R package to plot and compare tabular data on customizable maps across scenarios and time
yam: Yet another monitoring tool using correlations of ambient noise
CHAMP is a HPC Access and Metadata Portal
tipr: An R package for sensitivity analyses for unmeasured confounders
nleis.py: A Nonlinear Electrochemical Impedance Analysis Toolbox
pyro: a framework for hydrodynamics explorations and prototyping
Qlunc: Quantification of lidar uncertainty
GNOLL: Efficient Multi-Lingual Software for Real-World Dice Notation and Extensions
TRUNAJOD: A text complexity library to enhance natural language processing
CLOVER: A modelling framework for sustainable community-scale energy systems
Optimising Light Source Positioning for Even and Flux-Efficient Illumination
DoSOCS: A System for SPDX 2.0 Document Creation and Storage
AutoEncoderToolkit.jl: A Julia package for training (Variational) Autoencoders
STARRED: a two-channel deconvolution method with Starlet regularization
Additive Bayesian Networks
pyuvdata: an interface for astronomical interferometeric datasets in python
Wakeflow: A Python package for semi-analytic models of planetary wakes
The Walrus: a library for the calculation of hafnians, Hermite polynomials and Gaussian boson sampling
ChainConsumer
PyMPDATA v1: Numba-accelerated implementation of MPDATA with examples in Python, Julia and Matlab
ogs6py and VTUinterface: streamlining OpenGeoSys workflows in Python
HeXtractor: Extracting Heterogeneous Graphs from Structured and Textual Data for Graph Neural Networks
Optim: A mathematical optimization package for Julia
FGTpartitioner: A rapid method for parsimonious delimitation of ancestry breakpoints in large genome-wide SNP datasets
LinguiPhyR: A Package for Linguistic Phylogenetic Analysis in R
comorbidity: An R package for computing comorbidity scores
Ethome: tools for machine learning of animal behavior
MOTES: Modeling of Tensegrity Structures
epimargin: A Toolkit for Epidemiological Estimation, Prediction, and Policy Evaluation
overviewR - Easily Explore Your Data in R
hillmaker: A Python package for occupancy analysis in discrete entity flow systems
Lumen: A software for the interactive visualization of probabilistic models together with data
xrnet: Hierarchical Regularized Regression to Incorporate External Data
FEM_2D: A Rust Package for 2D Finite Element Method Computations with Extensive Support for hp-refinement
ThermoParser: Streamlined Analysis of Thermoelectric Properties
unfold: removing the barriers to sharing and reproducing prospective life-cycle assessment databases
CPgeneProfiler: A lightweight R package to profile the Carbapenamase genes from genome assemblies
qsort R package: A New Tool for Scoring Q-sort Data
rigr: Regression, Inference, and General Data Analysis Tools in R
PDOPT: A Python library for Probabilistic Design space exploration and OPTimisation
histoc: Histocompatibility analysis performed by kidney allocation systems
FAME-Core: An open Framework for distributed Agent-based Modelling of Energy systems
"Sensie": Probing the sensitivity of neural networks
Simulating instrumental systematics of Cosmic Microwave Background experiments with s4cmb
rabpro: global watershed boundaries, river elevation profiles, and catchment statistics
Catalyst: a Python JIT compiler for auto-differentiable hybrid quantum programs
robnptests - An R package for robust two-sample location and dispersion tests
Delve: Neural Network Feature Variance Analysis
gobbli: A uniform interface to deep learning for text in Python
pyuca: a Python implementation of the Unicode Collation Algorithm
OPSDN: an enhanced SDN simulation framework for OPNET Modeler
ROSS - Rotordynamic Open Source Software
EXP: a Python/C++ package for basis function expansion methods in galactic dynamics
VibIR-Parallel-Compute: Enhancing Vibration and Infrared Analysis in High-Performance Computing Environments
PyFstat: a Python package for continuous gravitational-wave data analysis
DIRECT: Deep Image REConstruction Toolkit
DendroPy 5: a mature Python library for phylogenetic computing
rTASSEL: An R interface to TASSEL for analyzing genomic diversity
Visualization of Multi-Dimensional Data - The data-slicer Package
SpecpolFlow: a new software package for spectropolarimetry using Python
Heta compiler: a software tool for the development of large-scale QSP models and compilation into simulation formats
gigs: A package for standardising fetal, neonatal, and child growth assessment
exoTEDRF: An EXOplanet Transit and Eclipse Data Reduction Framework
quanteda: An R package for the quantitative analysis of textual data
kuibit: Analyzing Einstein Toolkit simulations with Python
Mandyoc: A finite element code to simulate thermochemical convection in parallel
ndcube: Manipulating N-dimensional Astronomical Data in Python
Tamaas: a library for elastic-plastic contact of periodic rough surfaces
DBSP_DRP: A Python package for automated spectroscopic data reduction of DBSP data
USAboundaries: Historical and Contemporary Boundaries of the United States of America
py-pde: A Python package for solving partial differential equations
statsExpressions: R Package for Tidy Dataframes and Expressions with Statistical Details
emcee v3: A Python ensemble sampling toolkit for affine-invariant MCMC
D3mirt: Descriptive Three-Dimensional Multidimensional Item Response Theory for R
FOXES: Farm Optimization and eXtended yield Evaluation Software
Traja: A Python toolbox for animal trajectory analysis
EmissV: an R package to create vehicular and other emissions for air quality models
MWRpy: A Python package for processing microwave radiometer data
PyBullet Industrial: A process-aware robot simulation
brains-py, A framework to support research on energy-efficient unconventional hardware for machine learning
Talisman: a JavaScript archive of fuzzy matching, information retrieval and record linkage building blocks
QuantumReservoirPy: A Software Package for Time Series Prediction
BoltzMM: an R package for maximum pseudolikelihood estimation of fully-visible Boltzmann machines
PyBispectra: A toolbox for advanced electrophysiological signal processing using the bispectrum
drms: A Python package for accessing HMI and AIA data
pymcmcstat: A Python Package for Bayesian Inference Using Delayed Rejection Adaptive Metropolis
RNMC: kinetic Monte Carlo implementations for complex reaction networks
DiRe - JAX: A JAX based Dimensionality Reduction Algorithm for Large-scale Data
genieR: An R package for inference of demographic history of phylogenies
Rdataretriever: R Interface to the Data Retriever
MUQ: The MIT Uncertainty Quantification Library
AirTrafficSim: An open-source web-based air traffic simulation platform
cuisto: A Python package to quantify neurohistological data from QuPath and ABBA
scPCA: A toolbox for sparse contrastive principal component analysis in R
besos: Building and Energy Simulation, Optimization and Surrogate Modelling
validateHOT - an R package for the analysis of holdout/validation tasks and other choice modeling tools
Bluebonnet: Scaling solutions for production analysis from unconventional oil and gas wells
Tools for Prototyping with 3D Ultrasonics in ROS
Pointcloud: Implementation of point clouds as graphs in the 3D plant modeling platform GroIMP
Nanomesh: A Python workflow tool for generating meshes from image data
Madym: A C++ toolkit for quantitative DCE-MRI analysis
The Basic Model Interface 2.0: A standard interface for coupling numerical models in the geosciences
The 3D Slicer RVXLiverSegmentation plug-in for interactive liver anatomy reconstruction from medical images
zalpha: an R package for the identification of regions of the genome under selection
pathways: life cycle assessment of energy transition scenarios
NetworkSedimentTransporter: A Landlab component for bed material transport through river networks
OpenSCM Two Layer Model: A Python implementation of the two-layer climate model
f90nml - A Python module for Fortran namelists
Synch: A framework for concurrent data-structures and benchmarks
KinESim: Pre-equilibrium kinetic simulation of electrochemical reactions
CRATE: A Python package to perform fast material simulations
DMT-core: A Python Toolkit for Semiconductor Device Engineers
A Framework to Quality Control Oceanographic Data
spam: Software for Practical Analysis of Materials
nestcheck: error analysis, diagnostic tests and plots for nested sampling calculations
Kinematics-vis: A Visualization Tool for the Mathematics of Human Motion
elfe3D v1.0.1: Modelling with the total electric field approach using finite elements in 3D
fABBA: A Python library for the fast symbolic approximation of time series
commensurability: a Python package for classifying astronomical orbits based on their toroid volume
PCRedux: A Quantitative PCR Machine Learning Toolkit
PDLSM-FEM: Solver of Coupled Peridynamics Least Squares Minimization with Finite Element Method
Teaspoon: A Python Package for Topological Signal Processing
Re-Envisioning Numerical Information Field Theory (NIFTy.re): A Library for Gaussian Processes and Variational Inference
CloudnetPy: A Python package for processing cloud remote sensing data
PySDM v1: particle-based cloud modeling package for warm-rain microphysics and aqueous chemistry
qnm: A Python package for calculating Kerr quasinormal modes, separation constants, and spherical-spheroidal mixing coefficients
'FitBenchmarking': an open source 'Python' package comparing data fitting software
OwlDE: making ODEs first-class Owl citizens
tomso: TOols for Models of Stars and their Oscillations
patRoon 2.0: Improved non-target analysis workflows including automated transformation product screening
HealpixMPI.jl: an MPI-parallel implementation of the Healpix tessellation scheme in Julia
SpmImage Tycoon: Organize and analyze scanning probe microscopy data
Sit2StandPy: An Open-Source Python Package for Detecting and Quantifying Sit-to-Stand Transitions Using an Accelerometer on the Lower Back
sfctools - A toolbox for stock-flow consistent, agent-based models
pycellga: A Python package for improved cellular genetic algorithms
The nnlib2 library and nnlib2Rcpp R package for implementing neural networks
PyNM: a Lightweight Python implementation of Normative Modeling
WatchMe: Software for Reproducible Monitoring and Data Collection
Plotrr: Functions for making visual exploratory data analysis with nested data easier
PySLSQP: A transparent Python package for the SLSQP optimization algorithm modernized with utilities for visualization and post-processing
IDESolver: a general purpose integro-differential equation solver
unxt: A Python package for unit-aware computing with JAX
activAnalyzer: An R Shiny app to analyse ActiGraph accelerometer data and to implement the use of the PROactive Physical Activity in COPD instruments
Bayesian X-ray Analysis (BXA) v4.0
BCEA: An R Package for Cost-Effectiveness Analysis
An Open-Source Tool for Generating Domain-Specific Accelerators for Resource-Constrained Computing
DART: Dynamic Animation and Robotics Toolkit
sptotal: an R package for predicting totals and weighted sums from spatial data
schwimmbad: A uniform interface to parallel processing pools in Python
iRF: extracting interactions from random forests
ClassiPyGRB: Machine Learning-Based Classification and Visualization of Gamma Ray Bursts using t-SNE
pySBeLT: A Python software package for stochastic sediment transport under rarefied conditions
BotSlayer: real-time detection of bot amplification on Twitter
A framework for generating interactive reports for cancer genome analysis
pDEMtools: conveniently search, download, and process ArcticDEM and REMA products
Hickle: A HDF5-based python pickle replacement
Pycapacity: a real-time task-space capacity calculation package for robotics and biomechanics
AutoUncertainties: A Python Package for Uncertainty Propagation
MontePy: a Python library for reading, editing, and writing MCNP input files
prospect: an R package to link leaf optical properties with their chemical and structural properties with the leaf model PROSPECT
ER-Evaluation: End-to-End Evaluation of Entity Resolution Systems
graphlayouts: Layout algorithms for network visualizations in R
biopixR: Extracting Insights from Biological Images
fishRman: A Shiny R Dashboard improving Global Fishing Watch data availability
Micro Manager: a Python package for adaptive and flexible two-scale coupling
Omniscape.jl: Software to compute omnidirectional landscape connectivity
Open OnDemand: A web-based client portal for HPC centers
DBMS-Benchmarker: Benchmark and Evaluate DBMS in Python
AIBECS.jl: A tool for exploring global marine biogeochemical cycles
ObsPlus: A Pandas-centric ObsPy expansion pack
corner.py: Scatterplot matrices in Python
Generating CodeMeta Metadata for R Packages
dit: a Python package for discrete information theory
MyQueue: Task and workflow scheduling system
infer: An R package for tidyverse-friendly statistical inference
Isoreader: An R package to read stable isotope data files for reproducible research
INCHEM-Py: An open source Python box model for indoor air chemistry
NEoST: A Python package for nested sampling of the neutron star equation of state
sknet: A Python framework for Machine Learning in Complex Networks
autoplotly: An R package for automatic generation of interactive visualizations for statistical results
Semi-Automatic Classification Plugin: A Python tool for the download and processing of remote sensing images in QGIS