yusuke1997/dblp-id-title huggingface dataset:
The NIFSTD and BIRNLex Vocabularies: Building Comprehensive Ontologies for Neuroscience
The NIF LinkOut Broker: A Web Resource to Facilitate Federated Data Integration using NCBI Identifiers
Anatomic Interpretability in Neuroimage Deep Learning: Saliency Approaches for Typical Aging and Traumatic Brain Injury
NEURO-LEARN: a Solution for Collaborative Pattern Analysis of Neuroimaging Data
An Efficient Implementation of the Synchronization Likelihood Algorithm for Functional Connectivity
A Modular Workflow for Model Building, Analysis, and Parameter Estimation in Systems Biology and Neuroscience
SpiCoDyn: A Toolbox for the Analysis of Neuronal Network Dynamics and Connectivity from Multi-Site Spike Signal Recordings
The Resource Identification Initiative: A Cultural Shift in Publishing
A modified temporal self-correlation method for analysis of fMRI time series
Interactions Between Pre-Processing and Classification Methods for Event-Related-Potential Classification - Best-Practice Guidelines for Brain-Computer Interfacing
The Coming of Age of the Hippocampome
SlicesMapi: An Interactive Three-Dimensional Registration Method for Serial Histological Brain Slices
Phylogenetic Proximity Revealed by Neurodevelopmental Event Timings
RippleNet: a Recurrent Neural Network for Sharp Wave Ripple (SPW-R) Detection
FCN Based Label Correction for Multi-Atlas Guided Organ Segmentation
Necessity is the mother of innovation
Correction to: Geometric Reliability of Super-Resolution Reconstructed Images from Clinical Fetal MRI in the Second Trimester
From Model Specification to Simulation of Biologically Constrained Networks of Spiking Neurons
Mapping the Human Brain: New Insights from fMRI Data Sharing
Bright Field Neuronal Preparation Optimized for Automatic Computerized Reconstruction, a Case with Cerebellar Climbing Fibers
Review of Papers Describing Neuroinformatics Software
SpineCreator: a Graphical User Interface for the Creation of Layered Neural Models
Improving the Execution Performance of FreeSurfer - A New Scheduled Pipeline Scheme for Optimizing the Use of CPU and GPU Resources
A Computational Neural Model for Mapping Degenerate Neural Architectures
CAS: Cell Annotation Software - Research on Neuronal Tissue Has Never Been so Transparent
Mapping heritability and molecular genetic associations with cortical features using probabilistic brain atlases - Methods and applications to schizophrenia
Towards a Computational Model of Actor-Based Language Comprehension
Design and Application of Automated Algorithms for Diagnosis and Treatment Optimization in Neurodegenerative Diseases
RS-FetMRI: a MATLAB-SPM Based Tool for Pre-processing Fetal Resting-State fMRI Data
From data to knowledge
A Stereotactic Probabilistic Atlas for the Major Cerebral Arteries
Neuroanatomical term generation and comparison between two terminologies
Automatic Localization of Anatomical Point Landmarks for Brain Image Processing Algorithms
Toward a workbench for rodent brain image data systems architecture and design
Database Analysis of Simulated and Recorded Electrophysiological Datasets with PANDORA's Toolbox
3D Atlas of the Brain, Head and Neck in 2953 pieces
Autonomous robots based on inspiration from biology - The relation to neuroinformatics
Describing Different Brain Computer Interface Systems Through a Unique Model: A UML Implementation
The extensible neuroimaging archive toolkit - An informatics platform for managing, exploring, and sharing neuroimaging data
Collaborative Modeling in Neuroscience: Time to Go Open Model?
An Algorithm Based on a Cable-Nernst Planck Model Predicting Synaptic Activity throughout the Dendritic Arbor with Micron Specificity
Editorial: On the Economics of Neuroscientific Data Sharing
Latent Growth Models of Longitudinal Changes in Functional Connectivity during Early Stage Psychosis
Domain-Specific Data Sharing in Neuroscience: What Do We Have to Learn from Each Other?
The Scalable Brain Atlas: Instant Web-Based Access to Public Brain Atlases and Related Content
Multi-Modality Cascaded Convolutional Neural Networks for Alzheimer's Disease Diagnosis
Automated 3D Soma Segmentation with Morphological Surface Evolution for Neuron Reconstruction
Higher Derivatives of ERP Responses to Cross-Modality Processing
Hierarchical Structured Sparse Learning for Schizophrenia Identification
Predicting Placebo Responses Using EEG and Deep Convolutional Neural Networks: Correlations with Clinical Data Across Three Independent Datasets
Looking forward to open access
Handling and Analyzing Meshed Rendering of Segmented Structures From 3D Image Stacks in Blender
Complementary Strategies to Identify Differentially Expressed Genes in the Choroid Plexus of Patients with Progressive Multiple Sclerosis
Regularized Partial Least Square Regression for Continuous Decoding in Brain-Computer Interfaces
A Novel Group ICA Approach Based on Multi-scale Individual Component Clustering. Application to a Large Sample of fMRI Data
Optimizing Brain Networks Topologies Using Multi-objective Evolutionary Computation
Ontogenetic Ritualization of Primate Gesture as a Case Study in Dyadic Brain Modeling
Small Animal Multivariate Brain Analysis (SAMBA) - a High Throughput Pipeline with a Validation Framework
Effect of Electrode Distance and Size on Electrocorticographic Recordings in Human Sensorimotor Cortex
The internet analysis tools registry A public resource for image analysis
A Measure of Concurrent Neural Firing Activity Based on Mutual Information
Integrating Multimodal and Longitudinal Neuroimaging Data with Multi-Source Network Representation Learning
Review Paper: Reporting Practices for Task fMRI Studies
Identifying Diagnostic Biomarkers for Autism Spectrum Disorder From Higher-order Interactions Using the PED Algorithm
Validation and Optimization of BIANCA for the Segmentation of Extensive White Matter Hyperintensities
Identification of Imaging Biomarkers in Schizophrenia: A Coefficient-constrained Independent Component Analysis of the Mind Multi-site Schizophrenia Study
BrainLine: An Open Pipeline for Connectivity Analysis of Heterogeneous Whole-Brain Fluorescence Volumes
Wilfrid Rall
A Topological Representation of Branching Neuronal Morphologies
Fair localization of function via multi-lesion analysis
A Large Deformation Diffeomorphic Framework for Fast Brain Image Registration via Parallel Computing and Optimization
Transcriptome Architecture of Adult Mouse Brain Revealed by Sparse Coding of Genome-Wide In Situ Hybridization Images
Intracerebral EEG Artifact Identification Using Convolutional Neural Networks
Age Prediction Using Resting-State Functional MRI
Deformable Templates Guided Discriminative Models for Robust 3D Brain MRI Segmentation
Quantitative Arbor Analytics: Unsupervised Harmonic Co-Clustering of Populations of Brain Cell Arbors Based on L-Measure
A new era in computational neuroscience
Collection of Simulated Data from a Thalamocortical Network Model
Automated Brain Masking of Fetal Functional MRI with Open Data
Prediction of a Cell-Class-Specific Mouse Mesoconnectome Using Gene Expression Data
Generative Modelling of Cortical Receptor Distributions from Cytoarchitectonic Images in the Macaque Brain
ABLE: Automated Brain Lines Extraction Based on Laplacian Surface Collapse
Multi-Subject Analysis for Brain Developmental Patterns Discovery via Tensor Decomposition of MEG Data
Identifying Informative Imaging Biomarkers via Tree Structured Sparse Learning for AD Diagnosis
Fast Approximate Stochastic Tractography
Web Application for Quantification of Traumatic Brain Injury-Induced Cortical Lesions in Adult Mice
Soma Detection in 3D Images of Neurons using Machine Learning Technique
Neuroinformatics in the Time of Coronavirus
Visualizing Dynamical Neural Assemblies with a Fuzzy Synchronization Clustering Analysis
A Robust Reduced Rank Graph Regression Method for Neuroimaging Genetic Analysis
Sharing the mighty mouse
Inter-Network High-Order Functional Connectivity (IN-HOFC) and its Alteration in Patients with Mild Cognitive Impairment
Run-Time Interoperability Between Neuronal Network Simulators Based on the MUSIC Framework
Grid-distributed Statistical Parametric Mapping of SPECT and PET Neuroimages
Fuzzy-Logic Based Detection and Characterization of Junctions and Terminations in Fluorescence Microscopy Images of Neurons
Combining a Patch-based Approach with a Non-rigid Registration-based Label Fusion Method for the Hippocampal Segmentation in Alzheimer's Disease
Neuroinformatics Applications of Data Science and Artificial Intelligence
Genetic Insights into Brain Morphology: a Genome-Wide Association Study of Cortical Thickness and T 1 -Weighted MRI Gray Matter-White Matter Intensity Contrast
Pitfalls and Recommended Strategies and Metrics for Suppressing Motion Artifacts in Functional MRI
Alterations in Gray Matter Structure Linked to Frequency-Specific Cortico-Subcortical Connectivity in Schizophrenia via Multimodal Data Fusion
Semi-Automated Quantitative Evaluation of Neuron Developmental Morphology In Vitro Using the Change-Point Test
Validation of White-Matter Lesion Change Detection Methods on a Novel Publicly Available MRI Image Database
Template Construction Grammar: From Visual Scene Description to Language Comprehension and Agrammatism
A probabilistic functional atlas of the human subthalamic nucleus
Mathematical and Dynamic Modeling of the Anatomical Localization of the Insula in the Brain
Axiope - Data sharing using distributed catalogs
Reviewing Multi-Disciplinary Papers: a Challenge in Neuroscience?
A Minimum Bayes Factor Based Threshold for Activation Likelihood Estimation
The Internet Brain Volume Database: A Public Resource for Storage and Retrieval of Volumetric Data
Neuron-Miner: An Advanced Tool for Morphological Search and Retrieval in Neuroscientific Image Databases
MEA-ToolBox: an Open Source Toolbox for Standardized Analysis of Multi-Electrode Array Data
An MRI-Based, Data-Driven Model of Cortical Laminar Connectivity
Sign-Consistency Based Variable Importance for Machine Learning in Brain Imaging
The TREES Toolbox - Probing the Basis of Axonal and Dendritic Branching
Multi-Domain Transfer Learning for Early Diagnosis of Alzheimer's Disease
Automatic Dendritic Length Quantification for High Throughput Screening of Mature Neurons
Estimating Intracranial Volume in Brain Research: An Evaluation of Methods
Dataset of Magnetic Resonance Images of Nonepileptic Subjects and Temporal Lobe Epilepsy Patients for Validation of Hippocampal Segmentation Techniques
Data Citation and the Author Byline: Who's Line Is it Anyway?
PDAs in clinical practice - Having a database in your hand but keeping the decision in your brain
A WEKA Interface for fMRI Data
Unified Framework for Development, Deployment and Robust Testing of Neuroimaging Algorithms
A Graphics Processing Unit Accelerated Motion Correction Algorithm and Modular System for Real-time fMRI
Separating Neural Oscillations from Aperiodic 1/f Activity: Challenges and Recommendations
Automated Pathogenesis-Based Diagnosis of Lumbar Neural Foraminal Stenosis via Deep Multiscale Multitask Learning
VolRoverN: Enhancing Surface and Volumetric Reconstruction for Realistic Dynamical Simulation of Cellular and Subcellular Function
A Digital Atlas of Ion Channel Expression Patterns in the Two-Week-Old Rat Brain
Modelling and Analysis of Electrical Potentials Recorded in Microelectrode Arrays (MEAs)
Contexts and catalysts - A resolution of the localization and integration of function in the brain
Intensity Based Methods for Brain MRI Longitudinal Registration. A Study on Multiple Sclerosis Patients
Inverse Current Source Density Method in Two Dimensions: Inferring Neural Activation from Multielectrode Recordings
The cerefy brain atlases - Continuous enhancement of the electronic talairach-tournoux brain atlas
Inferences on the Watts-Strogatz Model: A Study on Brain Functional Connectivity
Statistical atlas of acute stroke from magnetic resonance diffusion-weighted-images of the brain
Automated Head Tissue Modelling Based on Structural Magnetic Resonance Images for Electroencephalographic Source Reconstruction
Fast, Accurate, and Stable Feature Selection Using Neural Networks
Identification of Mild Hepatic Encephalopathy Based on Multi-level Functional Connectivity Hypernetwork
Automated Analysis of Fundamental Features of Brain Structures
Preserving Derivative Information while Transforming Neuronal Curves
Making Connections in the Connectome Era
Model-Based and Model-Free Techniques for Amyotrophic Lateral Sclerosis Diagnostic Prediction and Patient Clustering
Towards Differential Connectomics with NeuroVIISAS
The NIF DISCO Framework: Facilitating Automated Integration of Neuroscience Content on the Web
Kaleido: Visualizing Big Brain Data with Automatic Color Assignment for Single-Neuron Images
PRoNTo: Pattern Recognition for Neuroimaging Toolbox
Computing Univariate Neurodegenerative Biomarkers with Volumetric Optimal Transportation: A Pilot Study
Genetic correlates of gene expression in recombinant inbred strains - A relational model system to explore neurobehavioral phenotypes
Morphology and Texture-Guided Deep Neural Network for Intracranial Aneurysm Segmentation in 3D TOF-MRA
Automated Segmentation of Mouse Brain Images Using Multi-Atlas Multi-ROI Deformation and Label Fusion
Confounding Effects on the Performance of Machine Learning Analysis of Static Functional Connectivity Computed from rs-fMRI Multi-site Data
A hybrid approach to shape-based interpolation of stereotactic atlases of the human brain
Possum - A Framework for Three-Dimensional Reconstruction of Brain Images from Serial Sections
Neuronal Apoptosis Revealed by Genomic Analysis: Integrating Gene Expression Profiles with Functional Information
Celebrating a decade of neuroscience databases - Looking to the future of high-throughput data analysis, data integration, and discovery neuroscience
Correction to: A Standards Organization for Open and FAIR Neuroscience: the International Neuroinformatics Coordinating Facility
A Library of Cortical Morphology Analysis Tools to Study Development, Aging and Genetics of Cerebral Cortex
Correction to: PyPNS: Multiscale Simulation of a Peripheral Nerve in Python
De-Identification Technique with Facial Deformation in Head CT Images
Effects of random external background stimulation on network synaptic stability after tetanization - A modeling study
Automatic Cerebral Hemisphere Segmentation in Rat MRI with Ischemic Lesions via Attention-based Convolutional Neural Networks
The DIADEM and Beyond
Software Development vis à vis Collaboration in Interdisciplinary Research
Single Neuron Modeling Identifies Potassium Channel Modulation as Potential Target for Repetitive Head Impacts
Musical Representation of Dendritic Spine Distribution: A New Exploratory Tool
A Self-supervised Deep Learning Model for Diagonal Sulcus Detection with Limited Labeled Data
Removal of Muscle Artifacts from EEG Recordings of Spoken Language Production
Visual Prompting Based Incremental Learning for Semantic Segmentation of Multiplex Immuno-Flourescence Microscopy Imagery
Computational Generation of Long-range Axonal Morphologies
Optimal Model Parameter Estimation from EEG Power Spectrum Features Observed during General Anesthesia
Updates to the Melbourne Children's Regional Infant Brain Software Package (M-CRIB-S)
NAPR: a Cloud-Based Framework for Neuroanatomical Age Prediction
Neuropsychological Testing and Structural Magnetic Resonance Imaging as Diagnostic Biomarkers Early in the Course of Schizophrenia and Related Psychoses
Scalable Query Answering Under Uncertainty to Neuroscientific Ontological Knowledge: The NeuroLang Approach
DeepMapi: a Fully Automatic Registration Method for Mesoscopic Optical Brain Images Using Convolutional Neural Networks
Deep Learning-based Classification of Resting-state fMRI Independent-component Analysis
3D-Deep Learning Based Automatic Diagnosis of Alzheimer's Disease with Joint MMSE Prediction Using Resting-State fMRI
Independent Multiple Factor Association Analysis for Multiblock Data in Imaging Genetics
A wavelet-based statistical analysis of fMRI data - I. Motivation and data distribution modeling
DTI Atlases Evaluations
Fusion of ULS Group Constrained High- and Low-Order Sparse Functional Connectivity Networks for MCI Classification
Textpresso for Neuroscience: Searching the Full Text of Thousands of Neuroscience Research Papers
FMST: an Automatic Neuron Tracing Method Based on Fast Marching and Minimum Spanning Tree
Handling Multiplicity in Neuroimaging Through Bayesian Lenses with Multilevel Modeling
Mouse neuroinformatic public resources - An invitation to end-users
Development of PowerMap: a Software Package for Statistical Power Calculation in Neuroimaging Studies
iqr: A Tool for the Construction of Multi-level Simulations of Brain and Behaviour
Volume Estimation of the Thalamus Using Freesurfer and Stereology: Consistency between Methods
Three Tools for the Real-Time Simulation of Embodied Spiking Neural Networks Using GPUs
WebQTL - Web-based complex trait analysis
Voronoi analysis uncovers relationship between mosaics of normally placed and displaced amacrine cells in the thraira retina
Sorting functional classes of evoked potentials by wavelets
Clustered organization of cortical connectivity
Modelling Cortical Laminar Connectivity in the Macaque Brain
Building FAIR Functionality: Annotating Events in Time Series Data Using Hierarchical Event Descriptors (HED)
Geometric Reliability of Super-Resolution Reconstructed Images from Clinical Fetal MRI in the Second Trimester
A Bayesian Multiplex Graph Classifier of Functional Brain Connectivity Across Diverse Tasks of Cognitive Control
Fallacies of Mice Experiments
Optimizing Colocalized Cell Counting Using Automated and Semiautomated Methods
Federated Analysis of Neuroimaging Data: A Review of the Field
Issues in the Design of a Pilot Concept-Based Query Interface for the Neuroinformatics Information Framework
How Machine Learning is Powering Neuroimaging to Improve Brain Health
Automating NEURON Simulation Deployment in Cloud Resources
Dangerous phase
Decentralized Brain Age Estimation Using MRI Data
Reducing Inter-Individual Differences in Task fMRI Preprocessing with OGRE (One-Step General Registration and Extraction) Preprocessing
Correction to: Building FAIR Functionality: Annotating Events in Time Series Data Using Hierarchical Event Descriptors (HED)
Share and share alike
Validating DICOM Transcoding with an Open Multi-Format Resource
Ontological Dimensions of Cognitive-Neural Mappings
Reproducible Evaluation of Diffusion MRI Features for Automatic Classification of Patients with Alzheimer's Disease
Simulation and robotics studies of salamander locomotion - Applying neurobiological principles to the control of locomotion in robots
Pandora: 4-D White Matter Bundle Population-Based Atlases Derived from Diffusion MRI Fiber Tractography
A modeling environment with three-dimensional morphology, A-Cell-3D, and Ca 2+ dynamics in a spine
Characterizing Regularization Techniques for Spatial Filter Optimization in Oscillatory EEG Regression Problems - Guidelines Derived from Simulation and Real-World Data
Correction to: Bayesian Coherence Analysis for Microcircuit Structure Learning
On the future of the human brain project
pyPheWAS: A Phenome-Disease Association Tool for Electronic Medical Record Analysis
A Comprehensive Framework to Capture the Arcana of Neuroimaging Analysis
Constructing Connectome Atlas by Graph Laplacian Learning
Auto-Segmentation and Classification of Glioma Tumors with the Goals of Treatment Response Assessment Using Deep Learning Based on Magnetic Resonance Imaging
Multi-Atlas Library for Eliminating Normalization Failures in Non-Human Primates
Performance of Convolutional Neural Network Models in Meningioma Segmentation in Magnetic Resonance Imaging: A Systematic Review and Meta-Analysis
Stitcher: A Surface Reconstruction Tool for Highly Gyrified Brains
Response to "Fallacies of Mice Experiments"
Anatomical Global Spatial Normalization
Improved ADHD Diagnosis Using EEG Connectivity and Deep Learning through Combining Pearson Correlation Coefficient and Phase-Locking Value
Brain maps and connectivity representation
Decentralized Mixed Effects Modeling in COINSTAC
An Automated Method for Cell Detection in Zebrafish
GTree: an Open-source Tool for Dense Reconstruction of Brain-wide Neuronal Population
Automated Neuron Reconstruction from 3D Fluorescence Microscopy Images Using Sequential Monte Carlo Estimation
An Informatics Approach to Integrating Genetic and Neurological Data in Speech and Language Neuroscience
ModelDB, neuroinformatics, and computational neuroscience
Cardiac Heterogeneity Prediction by Cardio-Neural Network Simulation
MEArec: A Fast and Customizable Testbench Simulator for Ground-truth Extracellular Spiking Activity
Relating fMRI and PET signals to neural activity by means of large-scale neural models
Neural query system - Data-mining from within the NEURON simulator
The Cognitive Paradigm Ontology: Design and Application
Neuroimaging-ITM: A Text Mining Pipeline Combining Deep Adversarial Learning with Interaction Based Topic Modeling for Enabling the FAIR Neuroimaging Study
Comparison of vector space model methodologies to reconcile cross-species neuroanatomical concepts
A Fast Method for the Segmentation of Synaptic Junctions and Mitochondria in Serial Electron Microscopic Images of the Brain
Scaling self-organizing maps to model large cortical networks
Graphical Model Based Multivariate Analysis (GAMMA): An Open-Source, Cross-Platform Neuroimaging Data Analysis Software Package
A Java-based fMRI Processing Pipeline Evaluation System for Assessment of Univariate General Linear Model and Multivariate Canonical Variate Analysis-based Pipelines
Automated Lesion and Feature Extraction Pipeline for Brain MRIs with Interpretability
The cell-centered database - A database for multiscale structural and protein localization data from light and electron microscopy
Inverse Current-Source Density Method in 3D: Reconstruction Fidelity, Boundary Effects, and Influence of Distant Sources
Towards Semi-Automatic Reconstruction of Neural Circuits
SynapticDB, Effective Web-based Management and Sharing of Data from Serial Section Electron Microscopy
A computational model of parallel navigation systems in rodents
fMRI Data Visualization with BrainBlend and Blender
Doubling up on the Fly: NeuroMorpho.Org Meets Big Data
Super-resolution Segmentation Network for Reconstruction of Packed Neurites
Time to Bring Single Neuron Modeling into 3D
Automated Reconstruction of Dendritic and Axonal Trees by Global Optimization with Geometric Priors
Dyslexia Data Consortium: A Comprehensive Platform for Neuroimaging Data Sharing, Analysis, and Advanced Research in Dyslexia
Controlling for Spurious Nonlinear Dependence in Connectivity Analyses
supFunSim: Spatial Filtering Toolbox for EEG
MaPPeRTrac: A Massively Parallel, Portable, and Reproducible Tractography Pipeline
Erratum to: The Java Image Science Toolkit (JIST) for Rapid Prototyping and Publishing of Neuroimaging Software
Point Analysis in Java Applied to Histological Images of the Perforant Pathway: A User's Account
The ups and downs of neuroscience shares
Addressing Pitfalls in Phase-Amplitude Coupling Analysis with an Extended Modulation Index Toolbox
An Automated Tool to Classify and Transform Unstructured MRI Data into BIDS Datasets
Uyghur Text Matching in Graphic Images for Biomedical Semantic Analysis
Meta-Analysis of Functional Roles of DICCCOLs
Interdisciplinary and Collaborative Training in Neuroscience: Insights from the Human Brain Project Education Programme
CellRemorph: A Toolkit for Transforming, Selecting, and Slicing 3D Cell Structures on the Road to Morphologically Detailed Astrocyte Simulations
CHIPS: an Extensible Toolbox for Cellular and Hemodynamic Two-Photon Image Analysis
CADENCE - Neuroinformatics Tool for Supervised Calcium Events Detection
Feasibility of Multi-site Clinical Structural Neuroimaging Studies of Aging Using Legacy Data
Tracking the Source of Quantitative Knowledge in Neuroscience: A Neuroinformatics Role for Computational Models
Prolegomena to a Neurocomputational Architecture for Human Grammatical Encoding and Decoding
Building a FP-CIT SPECT Brain Template Using a Posterization Approach