yusuke1997/dblp-id-title huggingface dataset:
Using UMLS to construct a generalized hierarchical concept-based dictionary of brain functions for information extraction from the fMRI literature
Facilitating pre-operative assessment guidelines representation using SNOMED CT
Heter-LP: A heterogeneous label propagation algorithm and its application in drug repositioning
Using an Artificial Neural Network to Detect Activations during Ventricular Fibrillation
Link-topic model for biomedical abbreviation disambiguation
A unified framework for evaluating the risk of re-identification of text de-identification tools
Development of fine-grained pill identification algorithm using deep convolutional network
Towards an ontology for sharing medical images and regions of interest in neuroimaging
Stable feature selection for clinical prediction: Exploiting ICD tree structure using Tree-Lasso
Drug-drug interaction extraction via hybrid neural networks on biomedical literature
Classification and prioritization of usability problems using an augmented classification scheme
Inter-observer agreement and reliability assessment for observational studies of clinical work
Clinical pathway-aware large language models for reliable and transparent medical dialogue
Fuzzy Evidential Network and Its Application as Medical Prognosis and Diagnosis Models
Bayesian approach to incorporating different types of biomedical knowledge bases into information retrieval systems for clinical decision support in precision medicine
Privacy-preserving screen capture: Towards closing the loop for health IT usability
Classifier ensemble selection based on affinity propagation clustering
Updating and recalibrating causal probabilistic models on a new target population
A multimodal machine learning algorithm improved diagnostic accuracy for otitis media in a school aged Aboriginal population
IMM/Scrub: A Domain-Specific Tool for the Deduplication of Vaccination History Records in Childhood Immunization Registries
Promoting equity in clinical research: The role of social determinants of health
Health Geomatics: An Enabling Suite of Technologies in Health and Healthcare
Semi-supervised Double Deep Learning Temporal Risk Prediction (SeDDLeR) with Electronic Health Records
A control study to evaluate a computer-based microarray experiment design recommendation system for gene-regulation pathways discovery
MTDCNet: A 3D multi-threading dilated convolutional network for brain tumor automatic segmentation
Alzheimer's Disease stage identification using deep learning models
Standardized electronic health record data modeling and persistence: A comparative review
Cross-domain visual prompting with spatial proximity knowledge distillation for histological image classification
Measuring prediction capacity of individual verbs for the identification of protein interactions
Ontology-driven identification of inconsistencies in clinical data: A case study in lung cancer phenotyping
Predicting patient acuity from electronic patient records
Measuring agreement in medical informatics reliability studies
Novel machine learning model for predicting cancer drugs' susceptibilities and discovering novel treatments
An ontology-driven semantic mashup of gene and biological pathway information: Application to the domain of nicotine dependence
Text mining for traditional Chinese medical knowledge discovery: A survey
Medical idioms for clinical Bayesian network development
Knowledge guided analysis of microarray data
Bayesian prediction of an epidemic curve
Predicting line of therapy transition via similar patient augmentation
Quantifying the determinants of outbreak detection performance through simulation and machine learning
A scoping review of fair machine learning techniques when using real-world data
Designing the design phase of critical care devices: a cognitive approach
Exploring a deep learning neural architecture for closed Literature-based discovery
How does normalization impact RNA-seq disease diagnosis?
Temporal information extraction with the scalable cross-sentence context for electronic health records
Measuring the cognitive effort associated with task switching in routine EHR-based tasks
Paraphrasing for condensation in journal abstracting
CAMIRADA: Cancer microRNA association discovery algorithm, a case study on breast cancer
Computer-interpretable clinical guidelines: A methodological review
A framework for modeling health behavior protocols and their linkage to behavioral theory
GERNERMED++: Semantic annotation in German medical NLP through transfer-learning, translation and word alignment
Comparing clinical decision support systems for improving follow-up of abnormal cervical cancer screening test results
BiomedRAG: A retrieval augmented large language model for biomedicine
Improved biomedical word embeddings in the transformer era
Outbreak detection through automated surveillance: A review of the determinants of detection
Chester: Towards a personal medication advisor
Beyond the override: Using evidence of previous drug tolerance to suppress drug allergy alerts; a retrospective study of opioid alerts
Structural group auditing of a UMLS semantic type's extent
Public health informatics
Constructing the gene regulation-level representation of microarray data for cancer classification
Analysis of eligibility criteria representation in industry-standard clinical trial protocols
Biomedical knowledge graph verification with multitask learning architectures
Domain adaptation of stable diffusion for ultrasound inpainting: a synthetic data approach for enhanced thyroid nodule segmentation
A systematic review of gamification in e-Health
Inferences of clinical diagnostic reasoning and diagnostic error
Small sum privacy and large sum utility in data publishing
Data integration and genomic medicine
A Few-shot learning approach for Monkeypox recognition from a cross-domain perspective
FAIR data sharing: The roles of common data elements and harmonization
Feature extraction for phenotyping from semantic and knowledge resources
Modeling the distribution of Nursing Effort using structured Labor and Delivery documentation
FIRLA: a Fast Incremental Record Linkage Algorithm
Unsupervised clustering of over-the-counter healthcare products into product categories
Transitive closure of subsumption and causal relations in a large ontology of radiological diagnosis
GLIF3: a representation format for sharable computer-interpretable clinical practice guidelines
Filtering big data from social media - Building an early warning system for adverse drug reactions
Data Management Plans in the genomics research revolution of Africa: Challenges and recommendations
A Closed-Loop Model of the Canine Cardiovascular System That Includes Ventricular Interaction
Optimization of infobutton design and Implementation: A systematic review
A computerized cellular imaging system for high content analysis in Monastrol suppressor screens
GutGPT: A multidimensional knowledge-enhanced large language model for gastrointestinal medicine
Network analysis with biological data of cancer patients: A scoping review
A multivalued agent-based model for the study of noncommunicable diseases
A framework to preserve the privacy of electronic health data streams
POPCORN: A web service for individual PrognOsis prediction based on multi-center clinical data CollabORatioN without patient-level data sharing
Exploring multimodal large language models on transthoracic Echocardiogram (TTE) tasks for cardiovascular decision support
A risk-based framework for biomedical data sharing
Evaluation of matched control algorithms in EHR-based phenotyping studies: A case study of inflammatory bowel disease comorbidities
Practical and secure telemedicine systems for user mobility
Weight optimized neural network for heart disease prediction using hybrid lion plus particle swarm algorithm
Usability flaws of medication-related alerting functions: A systematic qualitative review
Decisions about critical events in device-related scenarios as a function of expertise
Augmentation of the think aloud method with users' perspectives for the selection of a picture archiving and communication system
A survey on literature based discovery approaches in biomedical domain
SAGA: A hybrid search algorithm for Bayesian Network structure learning of transcriptional regulatory networks
Conceptual framework for prediction models of patient deterioration based on nursing documentation patterns: reproducibility and generalizability with a large number of hospitals across the United States
A study of the effectiveness of machine learning methods for classification of clinical interview fragments into a large number of categories
A predictive model of clinical deterioration among hospitalized COVID-19 patients by harnessing hospital course trajectories
Methodological concerns in usability evaluation of software prototypes
Identifying adverse drug event information in clinical notes with distributional semantic representations of context
Patient similarity for precision medicine: A systematic review
relSCAN - A system for extracting chemical-induced disease relation from biomedical literature
Bayesian clustering of flow cytometry data for the diagnosis of B-Chronic Lymphocytic Leukemia
MPCM-RRG: Multi-modal Prompt Collaboration Mechanism for Radiology Report Generation
Pixel-wise body composition prediction with a multi-task conditional generative adversarial network
Implementation of stacking based ARIMA model for prediction of Covid-19 cases in India
Prediction of clinical risks by analysis of preclinical and clinical adverse events
A multivariate time series approach to modeling and forecasting demand in the emergency department
Next generation terminology infrastructure to support interprofessional care planning
Integrated Bioinformatics Analysis for Identificating the Therapeutic Targets of Aspirin in Small Cell Lung Cancer
CMIID: A comprehensive medical information identifier for clinical search harmonization in Data Safe Havens
Interface analysis between GSVML and HL7 version 3
Analyzing time-dependent microarray data using independent component analysis derived expression modes from human macrophages infected with F. tularensis holartica
A comparison of word embeddings for the biomedical natural language processing
Real-Time PC-Based System for Dynamic Beat-to-Beat QT-RR Analysis
An unsupervised machine learning method for discovering patient clusters based on genetic signatures
Enhanced family history-based algorithms increase the identification of individuals meeting criteria for genetic testing of hereditary cancer syndromes but would not reduce disparities on their own
From concepts to clinical reality: An essay on the benchmarking of biomedical terminologies
Predicting the risk of acute care readmissions among rehabilitation inpatients: A machine learning approach
A study of the suitability of autoencoders for preprocessing data in breast cancer experimentation
Probabilistic techniques for obtaining accurate patient counts in Clinical Data Warehouses
RadioBERT: A deep learning-based system for medical report generation from chest X-ray images using contextual embeddings
Chronology of your health events: Approaches to extracting temporal relations from medical narratives
Experience and reflection from China's Xiangya medical big data project
A framework for the comparison of mobile patient monitoring systems
Deep graph convolutional network for US birth data harmonization
Semantic integration of information about orthologs and diseases: The OGO system
Pulse of the pandemic: Iterative topic filtering for clinical information extraction from social media
CRFs based de-identification of medical records
Fine-tuning coreference resolution for different styles of clinical narratives
EHR-based phenotyping: Bulk learning and evaluation
Cover 1/Spine
Signal from the noise: A mixed graphical and quantitative process mining approach to evaluate care pathways applied to emergency stroke care
Learning to rank query expansion terms for COVID-19 scholarly search
A retrospective approach to evaluating potential adverse outcomes associated with delay of procedures for cardiovascular and cancer-related diagnoses in the context of COVID-19
Application of AR and VR in hand rehabilitation: A systematic review
Visual storytelling enhances knowledge dissemination in biomedical science
Transfer learning based clinical concept extraction on data from multiple sources
Clustering clinical trials with similar eligibility criteria features
Information extraction for enhanced access to disease outbreak reports
Building a hospital referral expert system with a Prediction and Optimization-Based Decision Support System algorithm
A new feature selection method based on feature distinguishing ability and network influence
An image score inference system for RNAi genome-wide screening based on fuzzy mixture regression modeling
Integrating semantic dimension into openEHR archetypes for the management of cerebral palsy electronic medical records
Associating co-authorship patterns with publications in high-impact journals
vSPARQL: A view definition language for the semantic web
Multi-task learning with dynamic re-weighting to achieve fairness in healthcare predictive modeling
SURVFIT: Doubly sparse rule learning for survival data
Word embeddings and external resources for answer processing in biomedical factoid question answering
Combining multivariate statistics and the think-aloud protocol to assess Human-Computer Interaction barriers in symptom checkers
Living Profiles: Design of a health media platform for teens with special healthcare needs
Increasing EHR system usability through standards: Conformance criteria in the HL7 EHR-system functional model
Natural language processing for clinical notes in dentistry: A systematic review
Tag SNP selection via a genetic algorithm
Experimental analysis of heart rate variability of long-recording electrocardiograms in normal subjects and patients with coronary artery disease and normal left ventricular function
Scalable scientific interest profiling using large language models
A methodology for extending domain coverage in SemRep
A neural network-based joint learning approach for biomedical entity and relation extraction from biomedical literature
DSGeo: Software tools for cross-platform analysis of gene expression data in GEO
Book Review: Computational inverse problems in electrocardiography
A unified software framework for deriving, visualizing, and exploring abstraction networks for ontologies
Incorporation of expert variability into breast cancer treatment recommendation in designing clinical protocol guided fuzzy rule system models
BioPREP: Deep learning-based predicate classification with SemMedDB
Protein annotation from protein interaction networks and Gene Ontology
Using qualitative studies to improve the usability of an EMR
Biomedical applications of cell- and tissue-specific metabolic network models
Automatic summarization of MEDLINE citations for evidence-based medical treatment: A topic-oriented evaluation
Knowledge construction from time series data using a collaborative exploration system
An informatics framework for the standardized collection and analysis of medication data in networked research
A concept-driven biomedical knowledge extraction and visualization framework for conceptualization of text corpora
Older adults and mobile phones for health: A review
The INTEGRATE project: Delivering solutions for efficient multi-centric clinical research and trials
Building a comprehensive syntactic and semantic corpus of Chinese clinical texts
AnFiSA: An open-source computational platform for the analysis of sequencing data for rare genetic disease
Logical comparison over RDF resources in bio-informatics
Behavioural informatics for improving water hygiene practice based on IoT environment
Multilayer dynamic ensemble model for intensive care unit mortality prediction of neonate patients
Classification of clinically useful sentences in clinical evidence resources
Multi-perspective workflow modeling for online surgical situation models
Big data handling mechanisms in the healthcare applications: A comprehensive and systematic literature review
Rutabaga by any other name: extracting biological names
Model-free functional MRI analysis based on unsupervised clustering
A case study of an EMR system at a large hospital in India: Challenges and strategies for successful adoption
Knowledge discovery and sequence-based prediction of pandemic influenza using an integrated classification and association rule mining (CBA) algorithm
KG-Predict: A knowledge graph computational framework for drug repurposing
The Equity in Prescription Medicines Use Study: Using community pharmacy databases to study medicines utilisation
caTissue Suite to OpenSpecimen: Developing an extensible, open source, web-based biobanking management system
Automatic Segmentation of Lung Fields on Chest Radiographic Images
Using hit curves to compare search algorithm performance
The value of missing information in severity of illness score development
Degree centrality for semantic abstraction summarization of therapeutic studies
SATO (IDEAS expAnded wiTh BCIO): Workflow for designers of patient-centered mobile health behaviour change intervention applications
Transfer learning of classification rules for biomarker discovery and verification from molecular profiling studies
Understanding infusion administration in the ICU through Distributed Cognition
From lexical regularities to axiomatic patterns for the quality assurance of biomedical terminologies and ontologies
Agents and robots for collaborating and supporting physicians in healthcare scenarios
Smart conversational agents for the detection of neuropsychiatric disorders: A systematic review
An ontological modeling approach to cerebrovascular disease studies: The NEUROWEB case
Bioinformatic challenges in metagenomic next generation sequencing data analysis while unravelling a case of uncommon campylobacteriosis
Non-invasive prediction of massive transfusion during surgery using intraoperative hemodynamic monitoring data
Taxonomy-based prompt engineering to generate synthetic drug-related patient portal messages
Scalable privacy-preserving data sharing methodology for genome-wide association studies
Extracting important information from Chinese Operation Notes with natural language processing methods
In Memoriam. Safe, Sound and Profound: A Tribute to Prof. John Fox, PhD, FACMI, FIAHSI (1948-2021)
A new evaluation methodology for literature-based discovery systems
Learning hidden patterns from patient multivariate time series data using convolutional neural networks: A case study of healthcare cost prediction
Development and validation of early warning score system: A systematic literature review
A novel approach for connecting temporal-ontologies with blood flow simulations
Benchmarking domain-specific pretrained language models to identify the best model for methodological rigor in clinical studies
Archetype modeling methodology
Unique device identification and traceability for medical software: A major challenge for manufacturers in an ever-evolving marketplace
New probabilistic graphical models for genetic regulatory networks studies
Automated classification of cancer morphology from Italian pathology reports using Natural Language Processing techniques: A rule-based approach
CECRel: A joint entity and relation extraction model for Chinese electronic medical records of coronary angiography via contrastive learning
Assessing racial bias in healthcare predictive models: Practical lessons from an empirical evaluation of 30-day hospital readmission models
Whale optimized mixed kernel function of support vector machine for colorectal cancer diagnosis
Coreference resolution: A review of general methodologies and applications in the clinical domain
Introducing keytagging, a novel technique for the protection of medical image-based tests
Computer mediated reality technologies: A conceptual framework and survey of the state of the art in healthcare intervention systems
Clinical trial recommendations using Semantics-Based inductive inference and knowledge graph embeddings
Personal health information in research: Perceived risk, trustworthiness and opinions from patients attending a tertiary healthcare facility
A strategy for validation of variables derived from large-scale electronic health record data
BioPPISVMExtractor: A protein-protein interaction extractor for biomedical literature using SVM and rich feature sets
Privacy-preserving mimic models for clinical named entity recognition in French
Call for papers: Special issue on clinical natural language processing for secondary use applications
The ISO/IEC 11179 norm for metadata registries: Does it cover healthcare standards in empirical research?
PheValuator 2.0: Methodological improvements for the PheValuator approach to semi-automated phenotype algorithm evaluation
Outcomes prediction in longitudinal data: Study designs evaluation, use case in ICU acquired sepsis
Participatory design for computerization of clinical practice guidelines
SEGS: Search for enriched gene sets in microarray data
A semi-supervised approach using label propagation to support citation screening
Learning classification models from multiple experts
A meta-learning framework using representation learning to predict drug-drug interaction
Procedure prediction from symbolic Electronic Health Records via time intervals analytics
Global mapping of gene/protein interactions in PubMed abstracts: A framework and an experiment with P53 interactions
Clinical concept extraction: A methodology review
A comparison of methods for assessing penetrating trauma on retrospective multi-center data
A computer-human interaction model to improve the diagnostic accuracy and clinical decision-making during 12-lead electrocardiogram interpretation
Integrated network analysis of symptom clusters across disease conditions
Mapping Partners Master Drug Dictionary to RxNorm using an NLP-based approach
Adversarial reinforcement learning for dynamic treatment regimes
Understanding workflow in telehealth video visits: Observations from the IDEATel project
A reference ontology for biomedical informatics: the Foundational Model of Anatomy
Description of a method to support public health information management: Organizational network analysis
A novel bagging C4.5 algorithm based on wrapper feature selection for supporting wise clinical decision making
A research framework for pharmacovigilance in health social media: Identification and evaluation of patient adverse drug event reports
Prediction of drug's Anatomical Therapeutic Chemical (ATC) code by integrating drug-domain network
An analysis of malaria in the Brazilian Legal Amazon using divergent association rules
Creation of a new longitudinal corpus of clinical narratives
Semantic distance-based creation of clusters of pharmacovigilance terms and their evaluation
The impact of SNOMED CT revisions on a mapped interface terminology: Terminology development and implementation issues
Publishing artificial intelligence research papers: A tale of three journals
A Fuzzy Logic Approach to Identifying Brain Structures in MRI Using Expert Anatomic Knowledge
Learning dynamic Bayesian networks from time-dependent and time-independent data: Unraveling disease progression in Amyotrophic Lateral Sclerosis
Explainable classifier for improving the accountability in decision-making for colorectal cancer diagnosis from histopathological images
Methods for reasoning from geometry about anatomic structures injured by penetrating trauma
Maintaining automated measurement of Choosing Wisely adherence across the ICD 9 to 10 transition
Using genetic algorithm in reconstructing single individual haplotype with minimum error correction
Radiology report annotation using intelligent word embeddings: Applied to multi-institutional chest CT cohort
Cancerous nuclei detection on digitized pathological lung color images
A vocabulary development and visualization tool based on natural language processing and the mining of textual patient reports
Affordable, web-based surgical skill training and evaluation tool
A comparison of machine learning techniques for detection of drug target articles
Procurement of shared data instruments for Research Electronic Data Capture (REDCap)