yusuke1997/dblp-id-title huggingface dataset:
Huge Proteins in The Human Proteome and Their Participation in Hereditary Diseases
The Death factors: a combinatorial analysis
Gene Set Enrichment Analyses Revealed Differences in Gene Expression Patterns between Males and Females
Reconstructing viral quasispecies from NGS amplicon reads
Curvature distribution in prokaryotic genomes
The low complexity proteins from enteric pathogenic bacteria: Taxonomic parallels embedded in diversity
ISN1 Nucleotidases and HAD Superfamily Protein Fold: In silico Sequence and Structure Analysis
In memory of Vadim Aleksandrovich Ratner
Challenges in the Use of in silico Tools for Predicting Peptides Binding to HLA-Class II Molecules of HCV E1, E2, and P7
Nomenclature-based data retrieval without prior annotation: facilitating biomedical data integration with fast doublet matching
Are Categorical Periodograms and Indicator Sequences of Genomes Spectrally Equivalent?
Peptomics, identification of novel cationic Arabidopsis peptides with conserved sequence motifs
T-iDT: Tool for Identification of Drug Target in Bacteria and Validation by Mycobacterium Tuberculosis
In Silico Modeling and Hydrogen Peroxide Binding Study of Rice Catalase
Exhaustive Analysis of the Modular Structure of the Spliceosomal Assembly Network: A Petri Net Approach
In silico Analysis of T-bet Activity in Peripheral Blood Mononuclear Cells in Patients with Inflammatory Bowel Disease (IBD)
Prediction of Ubiquitin Proteins using Artificial Neural Networks, Hidden Markov Model and Support Vector Machines
Storing and Annotating of Kinetic Data
Models for Cannabinoid-1 Receptor Antagonistic Activity of Substituted 2-(3-Pyrazolyl)-1, 3, 4-Oxadiazoles
Cell Signaling Networks Ontology
Prediction of food protein allergenicity: a bioinformatic learning systems approach
Simulation of diffusion using a modular cell dynamic simulation system
The GTP Binding Sites Interacted with RNA-Dependent RNA Polymerase of Classical Swine Fever Virus in de novo Initiation
In silico cloning of a new protein kinase, Aik2, related to Drosophila aurora using the new tool: EST Blast
The German Conference on Bioinformatics 2001
Theoretical Study of Escherichia Coli Peptide Deformylase Inhibition by Several Drugs
In silico reconstruction of nutrient-sensing signal transduction pathways in Aspergillus nidulans
Database and analysis system for cDNA clones obtained from full-length enriched cDNA libraries
Making the body plan: Precision in the genetic hierarchy of Drosophila embryo segmentation
Limits of computational biology
Linking experimental results, biological networks and sequence analysis methods using Ontologies and Generalized Data Structures
Prediction of IFN-gamma regulated gene transcription
Preface - Dagstuhl Seminar on Integrative Bioinformatics
Evolution of Regulatory Motifs of Bacterial Transcription Factors
Curved DNA in promoter sequences
Knowledge Discovery and System Biology in molecular medicine: an application to neurodegenerative diseases
Metabolites, pathway flexibility
MOVE: A Multi-Level Ontology-Based Visualization and Exploration Framework for Genomic Networks
An analysis on gene architecture in human and mouse genomes
Evolutionary Analysis for the Functional Divergence of the Spo0A Protein: The Key Sporulation Control Element
u-Genome: A Database on Genome Design in Unicellular Genomes
MaXML: mouse annotation XML
Exploiting stoichiometric redundancies for computational efficiency and network reduction
Computational Prediction of Candidate miRNAs and their Targets from Medicago truncatula Non-Protein-Coding Transcripts
Regulatory Effects of Cooperativity and Signal Profile on Adaptive Dynamics in Incoherent Feedforward Loop Networks
Molecular chaperones: proposal of a systematic computer-oriented nomenclature and construction of a centralized database
Evaluation of Accuracy and Applicability of Protein Models: Retrospective Analysis of Biological and Biomedical Predictions
Information and simulation systems for the analysis of gene regulation and metabolic pathways (Preface)
Knowledge-based approach for the rapid generation of a representative ensemble of N-glycan conformations
Comparative Studies on Inhibitors of HIV Protease: A Target for Drug Design
Large-scale extraction of gene regulation for model organisms in an ontological context
The CAI Analyser Package: Inferring Gene Expressivity from Raw Genomic Data
Engineering Life through Synthetic Biology
In silico Analysis of Evolutionary Patterns in Restriction Endonucleases
Large-scale collection and characterization of promoters of human and mouse genes
Improving Usability and Accessibility of Cheminformatics Tools for Chemists through Cyberinfrastructure and Education
Deep Metazoan Phylogeny
Fragment-Based Molecular Design of New Competitive Dengue Den2 Ns2b/Ns3 Inhibitors from the Components of Fingerroot (Boesenbergia rotunda)
secureBLAST
"Good Annotation Practice" for Chemical Data in Biology
In Memory of Chris Overton
IMGT-Choreography for immunogenetics and immunoinformatics
Prophage Finder: A Prophage Loci Prediction Tool for Prokaryotic Genome Sequences
Use of contiguity on the chromosome to predict functional coupling
Operon conservation from the point of view of Escherichia coli, and inference of functional inter-dependence of gene products from genome context
Metal Transportome of Neurospora crassa
Improved Prediction of Allergenicity by Combination of Multiple Sequence Motifs
Detailed Comparison of the Protein-Ligand Docking Efficiencies of GOLD, a Commercial Package and ArgusLab, a Licensable Freeware
MetMAP: An integrated Matlab TM package for analysis and optimization of metabolic systems
Quality Assessment of the Affymetrix U133A&B Probesets by Target Sequence Mapping and Expression Data Analysis
Simulations of simple artificial genetic networks reveal features in the use of Relevance Networks
PESI - An intelligent system for Prediction of Enzyme - Substrate Interactions based on experimental constraints
eXpanda: An Integrated Platform for Network Analysis and Visualization
Annotating significant pairs of transcription factor binding sites in regulatory DNA
sRNAbase: A Web Resource for Small RNAs in Enterobacteriaceae\m{1}
Overlapping Genes May Control Reprogramming of Mouse Somatic Cells into Induced Pluripotent Stem Cells (iPSCs) and Breast Cancer Stem Cells
Bioinformatics research and education in Germany
A Computational Approach for Identification of Epitopes in Dengue Virus Envelope Protein: A Step Towards Designing a Universal Dengue Vaccine Targeting Endemic Regions
Modeling and simulation of biological systems with stochasticity
Seven clusters in genomic triplet distributions
Haploid evolutionary constructor: New features and further challenges
Correlation Between Gene Silencing Activity and Structural Features of Antisense Oligodeoxynucleotides and Target RNA
Using Grid Technology for Computationally Intensive Applied Bioinformatics Analyses
T Cell Receptor/Peptide/MHC Molecular Characterization and Standardized pMHC Contact Sites in IMGT/3Dstructure-DB
SSToSS - Sequence-Structural Templates of Single-Member Superfamilies
Notes on the use of ontologies in the biochemical domain
Information and sequence extraction around the 5'-end and translation initiation site of human genes
Cellular oscillators in animal segmentation
Vector-G: Multi-Modular SVM-Based Heterotrimeric G Protein Prediction
Alternatively Spliced Human Genes by Exon Skipping - a database
Reverse engineering of a mechanistic model of gene expression using metastability and temporal dynamics
Improving fold recognition of protein threading by experimental distance constraints
In Silico Characterization of Thermoactive, Alkaline and Detergent-Stable Lipase from a Staphylococcus Aureus Strain
BioCompass: A Novel Functional Inference Tool that Utilizes MeSH Hierarchy to Analyze Groups of Genes
Extracting Signature Motifs from Promoter Sets of Differentially Expressed Genes
EXProt - a database for EXPerimentally verified Protein functions
Database of patterns PROF_PAT, used to detect local similarities
In silico Identification of Candidate Drug and Vaccine Targets from Various Pathways in Neisseria gonorrhoeae
Integration of clinical and genetic information - from patient data to gene expression analysis
A Naive Bayes Classifier for Protein Function Prediction
High quality visualization of biochemical pathways in BioPath
Methods of horizontal gene transfer determination using phylogenetic data
Differential Genome Analyses of Metabolic Enzymes in Pseudomonas aeruginosa for Drug Target Identification
Temperature Influences Synonymous Codon and Amino Acid Usage Biases in the Phages Infecting Extremely Thermophilic Prokaryotes
Magmas gene structure and evolution
Content analysis of the core promoter region of human genes
Analysis of Gene Ontology Features in Microarray Data Using the Proteome BioKnowledge® Library
ANDVisio: A new tool for graphic visualization and analysis of literature mined associative gene networks in the ANDSystem
A database system for the analysis of biochemical pathways
In Silico Analysis of Burkholderia pseudomallei Genome Sequence for Potential Drug Targets
Mutational Bias and Gene Expression Level Shape Codon Usage in Thermobifida fusca YX
Three Dimensional Model for N-Terminal A Domain of DmpR (2-Dimethylphenol) Protein Based on Secondary Structure Prediction and Fold Recognition
In silico simulation of fingerprinting techniques based on double endonuclease digestion of genomic DNA
Molecular Modelling Study of the 3D Structure of the Bovine Viral Diarrhea Virus (BVDV) Helicase
An algorithm for identification of regulatory signals in unaligned DNA sequences, its testing and parallel implementation
Lower connectivity of tumor coexpression networks is not specific to cancer
Efficient Secondary Database Driven Annotation Using Model Organism Sequences
A New Domain Family in the Superfamily of Alkaline Phosphatases
Collection of soluble variants of membrane proteins for transcriptomics and proteomics
In silico exploration of the fructose-6-phosphate phosphorylation step in glycolysis: genomic evidence of the coexistence of an atypical ATP-dependent along with a PPi-dependent phosphofructokinase in Propionibacterium freudenreichii subsp. shermanii
In silico analysis of division times of Escherichia coli populations as a function of the partitioning scheme of non-functional proteins
Assessment of the Evolutionary Origin and Possibility of CRISPR-Cas (CASS) Interference Pathway in Vibrio cholerae O395
Local backbone structure prediction of proteins
Regulatory modules shared within gene classes as well as across gene classes can be detected by the same in silico approach
Analysis of bacterial RM-Systems through genome-scale analysis and related taxonomic issues
HBAT: A Complete Package for Analysing Strong and Weak Hydrogen Bonds in Macromolecular Crystal Structures
Bioinformatics visualization and integration with open standards: the Bluejay genomic browser
Steady state analysis of metabolic pathways using Petri nets
Complementing computationally predicted regulatory sites in Tractor_DB using a pattern matching approach
Canonical sensitivities: A useful tool to deal with large perturbations in metabolic network modeling
In silico search for functionally similar proteins involved in meiosis and recombination in evolutionarily distant organisms
Usage of Reaction Kinetics Data Stored in Databases - A Modeler's Point of View
Molecular Evolution of Serine/Arginine Splicing Factors Family (SR) by Positive Selection
Evolutionary analysis of human vascular endothelial growth factor, angiopoietin, and tyrosine endothelial kinase involved in angiogenesis and immunity
The utility of simple mathematical models in understanding gene regulatory dynamics
Clustering Formal Concepts to Discover Biologically Relevant Knowledge from Gene Expression Data
Integration of Enzyme Kinetic Data from Various Sources
Using prior knowledge to improve genetic network reconstruction from microarray data
TRANSPATH, TRANSFAC and CYTOMER as starting points for an ontology of regulatory networks
TRABAS: A Database for Transcription Regulation by ABA Signaling
In Silico Analysis of P53 Using the P53 Knowledgebase: Mutations, Polymorphisms, MicroRNAs and Pathways
Efficient two-sample designs for microarray experiments with biological replications
ISHAN: Sequence Homology Analysis Package
nWayComp: A Genome-Wide Sequence Comparison Tool for Multiple Strains/Species of Phylogenetically Related Microorganisms
Analysis of Tandem Repeats Found in 44 Prokaryotic Genomes
Computer System for Analysis of Molecular Evolution Modes (SAMEM): Analysis of molecular evolution modes at deep inner branches of the phylogenetic tree
Coding Potential Prediction in Wolbachia Using Artificial Neural Networks
Functional classification of proteins using a nearest neighbour algorithm
Analysis of n-Gram based Promoter Recognition Methods and Application to Whole Genome Promoter Prediction
Dynamic cellular automata: a simple but powerful approach to cellular simulation
AliBaba2: Context specific identification of transcription factor binding sites
KEGG-Based Pathway Visualization Tool for Complex Omics Data
Social Behavior of The Yeast Protein-Protein Interaction Network
Simulation-Based Validation of the p53 Transcriptional Activity with Hybrid Functional Petri Net
Ontology Based Standardization of Petri Net Modeling for Signaling Pathways
Four basic symmetry types in the universal 7-cluster structure of microbial genomic sequences
Adaptive neural network command filtered backstepping impedance control for uncertain robotic manipulators with disturbance observer
Adaptive optimal fault-tolerant control scheme for a class of strict-feedback nonlinear systems
Fault-tolerant formation control of stochastic nonlinear multi-agent systems with time-varying weighted topology
Finding complement of inefficient feature clusters obtained by metaheuristic optimization algorithms to detect rock mineral types
Event-triggered stochastic consensus for networked Lagrangian systems with semi-Markov switching topologies and communication delays
On wavelet-based statistical process monitoring
Application of adaptive robust control for electro-hydraulic motion loading system
Robust block roots assignment in linear discrete-time sliding mode control for a class of multivariable system: gas turbine power plant application
Observer-based integrated event-triggered sliding mode control for Internet of vehicles with communication constraints
Factors affecting trust in the transparency index for stable and intuitive physical human-robot cooperation
A finite frequency domain-based approach for active fault tolerant control of linear time-delay systems with residual feedback
Sparse representation preserving embedding based on extreme learning machine for process monitoring
Given-time consensus for stochastic Markov jump networks by dynamic output feedback
Chaos synchronization of brushes direct current motors for electric vehicle: Adaptive fuzzy immersion and invariance approach
Adaptive invariant Kalman filtering for lie groups attitude estimation with biased and heavy-tailed process noise
Enlarging the region of stability in robust model predictive controller based on dual-mode control
Observer-based adaptive neural sliding mode trajectory tracking control for remotely operated vehicles with thruster constraints
Internal pressure control for high-speed trains based on condition matching and performance iteration
Feedforward control for underactuated bipedal walking on compliant continuous steps with varying height
Vehicle stability enhancement and rollover prevention by a nonlinear predictive control method
Decentralized adaptive tracking control for high-order interconnected stochastic nonlinear time-varying delay systems with stochastic input-to-state stable inverse dynamics by neural networks
Adaptive state estimation of Markov switched neural networks driven by Lévy noise
Stability and L1-gain analysis for positive delay systems with large delay period
Penetration detection with intention recognition for cooperatively controlled robotic needle insertion
3D optimal defensive guidance strategy with safe distance
Synchronization control for robot manipulators driven by induction motors with flux and velocity observers
A lateral control strategy for unmanned ground vehicles with model predictive control and active disturbance rejection control
Cross term constructed Lyapunov function based two-time scale controller design and vibration suppression for a rotating hub-beam system
Fault estimation based on observer for chaotic Lorenz system with bifurcation problem
Bearing performance degradation assessment using adversarial fusion convolutional autoencoder based on multi-source information
Fault tolerant control with disturbance estimator for a class of linear parameter varying systems subject to time-varying fault
Comment on 'Adaptive prescribed performance sliding mode control of MEMS gyroscope'
Diagnosis of malaria disease by integrating chi-square feature selection algorithm with convolutional neural networks and autoencoder network
Reliable filter synthesis for a class of stochastic systems under nonhomogeneous Markovian switching
Dual-loop generalized predictive control method for two-phase three-wire railway active power quality controller
Thermal monitoring of lithium-ion batteries based on machine learning and fibre Bragg grating sensors
Precise variable spraying system based on improved genetic proportional-integral-derivative control algorithm
Reinforcement learning-based dynamic position control of mobile node for ocean sensor networks
Controller design for a fractional-order nonlinear glucose-insulin system using feedback linearization
A new multimodel approach by Laguerre filters on sliding window for nonlinear system identification and control
Hardware-in-the-loop simulation and implementation of a fuzzy logic controller with FPGA: case study of a magnetic levitation system
Krylov subspace model order reduction of linear dynamical systems with quadratic output
Tracking control for robotic manipulators with prescribed performance and adaptive sliding mode disturbance observer
Insulin infusion rate control using information theoretic-based nonlinear model predictive control for type 1 diabetes patients
Functional observer design for T-S fuzzy neutral systems
An LMI approach to non-fragile robust optimal guaranteed cost control of uncertain 2-D discrete systems with both state and input delays
Observer-based adaptive neural network control for stabilized platform in rotary steerable system with unknown input dead-zone
Fixed-time consensus of first-order multi-agent systems over signed directed graphs
Observer-based adaptive control of robot manipulators using reinforcement learning and the Fourier series expansion
Fault diagnosis method of Bayesian network based on association rules
Robust dynamic sliding mode control of robot manipulators using the Fourier series expansion
Distributed adaptive event-triggered iterative learning controller based on a filtering network
Robust data-driven model-free adaptive control to uncertainties and disturbances for NARMAX systems
Adaptive distributed scheduling of the resources in smart grids with considering demand response
An unknown input observer-based decentralized fault detection and isolation for a class of large-scale interconnected nonlinear systems
Leader-following consensus for nonlinear multiagent systems with large delays
Robust relative orbit synchronization for spacecraft cluster: A distributed learning sliding mode control approach
H∞ Filtering for two-dimensional discrete switched systems in the second Fornasini and Marchesini model
Sample-data output-feedback parameter variable control of glucose for type 1 diabetes mellitus patients
Static output feedback stabilization of discrete time linear time invariant systems based on approximate dynamic programming
Editorial for Transactions of the Institute of Measurement and Control themed issue on Control Engineering in Shaping a Low Energy Future
Immersion and invariance-based filtered transformation with application to estimator design for a class of DC-DC converters
Sensor fault and state estimation for uncertain fuzzy descriptor systems: An LMI approach
Modeling, simulation and control of the dynamics of a Heptads' effect evaporator system used in the Kraft recovery processes
Stability of digital filters subject to external interference and state-delay
One-class classifiers ensemble based anomaly detection scheme for process control systems
Energy-based output feedback control of the underactuated 2DTORA system with saturated inputs
Estimator-based multi-target tracking of networked robotic systems via predefined-time hierarchical control method
Sensorless control of permanent magnet synchronous motor based on improved sliding mode observer
Smith predictor based fractional-order integral controller for robust temperature control in a steel slab reheating furnace
Robust static output feedback H∞-controller design for three degree of freedom integrated bus lateral, yaw, roll dynamics model
Formation control for multi-UAVs systems based on Kullback-Leibler divergence
Robust observer-based controller design for nonlinear parameter-varying systems with uncertainty and external disturbances
Design, modeling, and control of a horizontal magnetic micromanipulator
Event-triggered state and fault simultaneous estimation for nonlinear systems with time delays
A novel force-velocity field for object manipulation with a model-free cooperative controller
Decentralized time-delay controller design for systems described by delay differential-algebraic equations
Real time assessment of power quality issues in 11 kV/440 V distribution feeder using distribution static synchronous compensator
Fractional order Proportional-Integral-Derivative Controller parameter selection based on iterative feedback tuning. Case study: Ball Levitation system
Multi-model estimation using neural network and fault detection in unknown time continuous fractional order nonlinear systems
Enhanced data-driven optimal iterative learning control for nonlinear non-affine discrete-time systems with iterative sliding-mode surface
Two time-scale observer-based robust motion controller design and realization of a linear actuator
Fault-tolerant path-tracking control of autonomous electric ground vehicles with lateral prescribed performance
Prescribed performance-based tracking control for quadrotor UAV under input delays and input saturations
Optimal impulsive control for advertising strategy problems based on a gradient-based PSO algorithm
Delay sampled-data stabilization of stochastic multi-weights networks with Lévy noise
An improved particle filter propeller fault prediction method based on grey prediction for underwater vehicles
Predictive fault-tolerant control for nonlinear batch processes with small time delays via iterative learning control: A Lyapunov-Razumikhin approach
Guaranteed-performance consensus for multi-agent systems with Lipschitz nonlinearity
Optimal fractional-order proportional-integral-derivative control enabling full actuation of decomposed rotary inverted pendulum system
Risk assessment of COVID-19 based on a new structure of neural fuzzy probabilistic model
Distributed finite-time adaptive consensus output-feedback control of multi-agent systems under switching topologies
Performance evaluation of constant current and constant voltage charge control modes of an inductive power transfer circuit with double-sided inductor-capacitor-capacitor and inductor-capacitor/series compensations for electrical vehicle battery charge applications
Editorial for TOK 2016 special section
Exquisite disturbance attenuation control for a rotary inverted pendulum
Consensus of discrete-time multi-agent systems with consecutive packet losses in directed communication topology
Control of magnetic levitation system using recurrent neural network-based adaptive optimal backstepping strategy
A novel load prediction method for hybrid electric ship based on working condition classification
Support vector machine and its difficulties from control field of view
Asymptotic stability of solutions of impulsive multi-delay differential equations