yusuke1997/dblp-id-title huggingface dataset:
On origin and evolution of carbonic anhydrase isozymes: A phylogenetic analysis from whole-enzyme to active site
Presto(protein Engineering Simulator): A Vectorized Molecular Mechanics Program for Biopolymers
The exploring AI-generated pyrazalone derivatives as antifungal agents: Bringing together molecular docking and quantum chemical approaches
Deriving Non-homogeneous DNA Markov Chain Models by Cluster Analysis Algorithm Minimizing Multiple Alignment Entropy
Integrating (deep) machine learning and cheminformatics for predicting human intestinal absorption of small molecules
A Central Atom Based Algorithm and Computer Program for Substructure Search
Statistical models in assessing fold change of gene expression in real-time RT-PCR experiments
Comparative analysis of the mechanisms of sulfur anion oxidation and reduction by dsr operon to maintain environmental sulfur balance
Search for all self-avoiding paths graphs for molecular graphs
Relationship of Crystal Structure to Interionic Interactions in the Lithium-manganese Spinel Oxides
Exploration of benzhydrol analogues of 1′-acetoxychavicol acetate as potential inhibitors of sdrE adhesion protein in Staphylococcus aureus: Antimicrobial activity and multi-computational analysis
G Matrix assembly and SCF iteration damping
Landscape of ROD9 Island: Functional annotations and biological network of hypothetical proteins in Salmonella enterica
Targeting cadherins with colicins: Molecular docking and dynamics reveal disruptive potential in cancer metastasis
A vibrational entropy term for DNA docking with autodock
Stable H-bond networks are crucial for selective CDK4 inhibition revealed from comprehensive in silico investigation
Integrative approaches to reconstruct regulatory networks from multi-omics data: A review of state-of-the-art methods
Intramolecular interactions in molecular mechanics calculations
Subcellular localization based comparative study on radioresistant bacteria: A novel approach to mine proteins involve in radioresistance
Quantitative and Qualitative Analyses in Near Infrared Analysis of Basic Compounds in Sugar Beet Leaf
Understanding the general packing rearrangements required for successful template based modeling of protein structure from a CASP experiment
Molecular modeling of cationic porphyrin-anthraquinone hybrids as DNA topoisomerase IIβ inhibitors
Feasibility of a ens-dimensional search system
ncRDeep: Non-coding RNA classification with convolutional neural network
Diosgenin targets ITGA11-driven angiogenesis in hepatocellular carcinoma: Prognostic and mechanistic insights
Computational study and design of effective siRNAs to silence structural proteins associated genes of Indian SARS-CoV-2 strains
BUFMAKE: A Computer Program to Calculate the Compositions of Buffers of Defined Buffer Capacity and Ionic Strength for Ultra-violet Spectrophotometry
Analytical first derivatives if the energy in MNDO
TTAgP 1.0: A computational tool for the specific prediction of tumor T cell antigens
Computational identification of drug-like marine natural products as potential RNA polymerase inhibitors against Nipah virus
Circular code motifs in transfer RNAs
Generating Protein Three-dimensional Fold Signatures using Inductive Logic Programming
Inference of gene regulatory networks based on the Light Gradient Boosting Machine
Mining channel-regulated peptides from animal venom by integrating sequence semantics and structural information
QDCRNet: Quantum dilated convolutional recurrent network for virus detection using gene expression data
In silico allergenicity prediction of several lipid transfer proteins
A family of metrics for biopolymers based on counting independent sets
Microsecond molecular dynamics simulations reveal the allosteric regulatory mechanism of p53 R249S mutation in p53-associated liver cancer
Reduced protein sequence patterns in identifying key structural elements of dissimilatory sulfite reductase homologs
Molecular Interstitial Skeleton
Stable and Robust Solution of Trigonometric Equations
In silico analysis to identify novel amidase enzymes from unclassified bacteria present in coal metagenome
An Extended Cellular Space Method for Simulating Autocatalytic Oligonucleotides
16S amplicon sequencing and functional gene prediction of microbial community in Inner West Aegean, Turkey
Implementation of a macromolecular mechanics program on a cyber 205 supercomputer
In silico identification of potential inhibitors against human 2'-5'- oligoadenylate synthetase (OAS) proteins
A hybrid EfficientNet-DbneAlexnet for brain tumor detection using MRI images
A macroscopic kinetic model for DNA polymerase elongation and high-fidelity nucleotide selection
Cellular and molecular determinants of lymph node metastasis in papillary thyroid carcinoma: Integrated multi-omics profiling and machine learning models
Improved QSPR Analysis of Standard Entropy of Acyclic and Aromatic Compounds using Optimized Correlation Weights of Linear Graph Invariants
Computer Modeling of Graphite Oxidation: Differences Between Monolayer and Multilayer Etching
Comparison between Echinococcus granulosus sensu stricto (G1) and E. canadensis (G6) mitochondrial genes ( cox1 and nad1 ) and their related protein models using experimental and bioinformatics analysis
Improved pharmacological properties of nitrotyrosine drug via fluorination: A theoretical study
Artificial Neural Networks for Molecular Sequence Analysis
A new hierarchical notation system and its application to the estimation of the standard enthalpy of formation
An exponential Galerkin method for solutions of HIV infection model of CD4 + T-cells
A Hardware and Software Environment for Parallel Processing with PCs
A procedure for making extended Hgckel calculations in limited memory
Extended Concept of Reaction Generators in an Organic Reaction Prediction System CSB
Incremental learning for acute lymphoblastic leukemia classification based on hybrid deep learning using blood smear image
Computational insights into factor affecting the potency of diaryl sulfone analogs as Escherichia coli dihydropteroate synthase inhibitors
An efficient new method of ytterbium(III) triflate catalysis approach to the synthesis of substituted pyrroles: DFT, ADMET, and molecular docking investigations
Network-based approach to identify molecular signatures and therapeutic agents in Alzheimer's disease
Cracking the code: lncRNA-miRNA-mRNA integrated network analysis unveiling lncRNAs as promising non-invasive NAFLD biomarkers toward precision diagnosis
Comprehending the pharmacological mechanism of marine phenolic acids in bladder cancer therapy against matrix metalloproteinase 9 protein by integrated network pharmacology and in-silico approaches
Data-based modeling and prediction of cytotoxicity induced by contaminants in water resources
Exploring the reason for increased activity of SHP2 caused by D61Y mutation through molecular dynamics
A monte-carlo approach to error propagation
A calculator program for calculating hydrogen atom coordinates
Chemical sensitivity analysis theory with applications to molecular dynamics and kinetics
Convolutional neural networks with image representation of amino acid sequences for protein function prediction
diSBPred: A machine learning based approach for disulfide bond prediction
A Computer System to Perform Structure Comparison using Representations of Protein Structure
Microcomputers in the process industry : E.R. Robinson, Ellis Horwood Limited, Chichester, 1985. ISBN 0 85312-723-9. Distributed by John Wiley & Sons, Halsted Press, New York, in the U.S.A.
Microtubule dynamics regulated by stathmin
Potential Traps for an Excess Electron in Liquid Water. Geometry, Energy Distributions and Lifetime
A survey of recently emerged genome-wide computational enhancer predictor tools
A deep learning ensemble for function prediction of hypothetical proteins from pathogenic bacterial species
Computer graphics and the generation of DNA confirmations for intercalation studies
Novel Atom-type AI Indices for QSPR Studies of Alcohols
Pharmacophore modeling, molecular docking and molecular dynamics simulations toward identifying lead compounds for Chk1
Drug-target interaction prediction by integrating multiview network data
Exploring the mechanism of Cremastra Appendiculata (SUANPANQI) against breast cancer by network pharmacology and molecular docking
DTIP-TC2A: An analytical framework for drug-target interactions prediction methods
Extraction of knowledge graph of Covid-19 through mining of unstructured biomedical corpora
GeneMCL in microarray analysis
Predicting functional regulatory SNPs in the human antimicrobial peptide genes DEFB1 and CAMP in tuberculosis and HIV/AIDS
In silico analysis of novel Triacontafluoropentadec-1-ene as a sustainable replacement for dodecane in fisheries microplastics: Molecular docking, dynamics simulation and pharmacophore studies of acetylcholinesterase activity
Novel PC-program-systems for Efficient Analysis; Simulation and Iteration of High-resolution 1-D NMR Spectra
Parallel molecular computation of modular-multiplication with two same inputs over finite field GF(2 n ) using self-assembly of DNA tiles
HKFGCN: A novel multiple kernel fusion framework on graph convolutional network to predict microbe-drug associations
Cholinesterases, carbonic anhydrase inhibitory properties and in silico studies of novel substituted benzylamines derived from dihydrochalcones
Probing the functions of long non-coding RNAs by exploiting the topology of global association and interaction network
Multi-dimensional search for drug-target interaction prediction by preserving the consistency of attention distribution
Matching algorithms for assigning orthologs after genome duplication events
Insights into β 3 -adrenoceptor agonism through comprehensive in silico investigation
Analysis of high resolution NMR spectra using a minicomputer
1, 3-Oxazole derivatives of cytisine as potential inhibitors of glutathione reductase of Candida spp. : QSAR modeling, docking analysis and experimental study of new anti-Candida agents
Computational intelligence techniques in bioinformatics
Gene expression analysis of combined RNA-seq experiments using a receiver operating characteristic calibrated procedure
Synthesis, antibacterial activity, synergistic effect, cytotoxicity, docking and molecular dynamics of benzimidazole analogues
Using gene expression programming to infer gene regulatory networks from time-series data
Genome-wide evidence of positive selection in Bacteroides fragilis
Discovery of natural MCL1 inhibitors using pharmacophore modelling, QSAR, docking, ADMET, molecular dynamics, and DFT analysis
A novel fuzzy set based multifactor dimensionality reduction method for detecting gene-gene interaction
Targeting the Akt1 allosteric site to identify novel scaffolds through virtual screening
Integrated study reveals mechanism of Tripterygium Wilfordii against cholangiocarcinoma based on bioinformatics approaches and molecular dynamics simulation
Dynamics of human defensin 5 (HD5) self-assembly in solution: Molecular simulations/insights
GQSAR modeling and combinatorial library generation of 4-phenylquinazoline-2-carboxamide derivatives as antiproliferative agents in human Glioblastoma tumors
De novo transcriptome assembly and identification of salt-responsive genes in sugar beet M14
An Assessment of the Padé-Laplace Method for Transient Electric Birefringence Decay Analysis
E-pharmacophore and deep learning based high throughput virtual screening for identification of CDPK1 inhibitors of Cryptosporidium parvum
In silico design, synthesis and anti-HIV activity of quinoline derivatives as non-nucleoside reverse transcriptase inhibitors (NNRTIs)
Integrative graph regularized matrix factorization for drug-pathway associations analysis
Identifying cancer specific signaling pathways based on the dysregulation between genes
Transcriptome-wide identification of Rauvolfia serpentina microRNAs and prediction of their potential targets
Synthesis, computational quantum chemical study, in silico ADMET and molecular docking analysis, in vitro biological evaluation of a novel sulfur heterocyclic thiophene derivative containing 1, 2, 3-triazole and pyridine moieties as a potential human topoisomerase IIα inhibiting anticancer agent
Beyond standard pipeline and p
Restrain: A restrained least squares refinement program for use in protein crystallography
Involvement of non-polyalanine (polyA) residues in aggregation of polyA proteins: Clue for inhibition of aggregation
Computational Molecular Biology: From Sequence Research to Software Development
ILYCROsite: Identification of lysine crotonylation sites based on FCM-GRNN undersampling technique
Penalized estimation of sparse concentration matrices based on prior knowledge with applications to placenta elemental data
Large scale scientific computation via minicomputer
A method for the determination of the activation energy for a reaction from a single kinetic run
Distributions and Averages of Molecular Conformations
Molecular evolution and structural variations in nuclear encoded chloroplast localized heat shock protein 26 (sHSP26) from genetically diverse wheat species
A model for the proteolytic regulation of LpxC in the lipopolysaccharide pathway of Escherichia coli
A clinical decision support system for skin cancer classification using fractional gooseneck barnacle-enabled ensemble classifier
Molecular insight into the genomic variation of SARS-CoV-2 strains from current outbreak
Computer graphics with lines of variable thickness
Circular code motifs in transfer and 16S ribosomal RNAs: A possible translation code in genes
Unveiling therapeutic biomarkers and druggable targets in ALS: An integrative microarray analysis, molecular docking, and structural dynamic studies
Subtle discrepancies of SF2/ASF ESE sequence motif among human tissues: A computational approach
Why does beta-secretase zymogen possess catalytic activity? Molecular modeling and molecular dynamics simulation studies
Protein ligand interaction database (PLID)
The Use of Optimization Techniques in the Phase Identification of Sulphation Limestone Products
Preliminary approach to estimation and prediction of infrared spectroscopy for Mannich bases by atomic electronegativity distance vector (VAED)
AScirRNA: A novel computational approach to discover abiotic stress-responsive circular RNAs in plant genome
Data Analysis Using Scale-space Filtering and Bayesian Probabilistic Reasoning
Two Strategies for Sequence Comparison: Profile-preprocessed and Secondary Structure-induced Multiple Alignment
The operons, a criterion to compare the reliability of transcriptome analysis tools: ICA is more reliable than ANOVA, PLS and PCA
Structural and energetic insight into the interactions between the benzolactam inhibitors and tumor marker HSP90α
Effect of example weights on prediction of protein-protein interactions
Computational analysis of substrate recognition of Sars-Cov-2 Mpro main protease
A merged molecular docking, ADME-T and dynamics approaches towards the genus of Arisaema as herpes simplex virus type 1 and type 2 inhibitors
Deep2Pep: A deep learning method in multi-label classification of bioactive peptide
Prediction of peptide conformation using a scale-transformed entropy sampling algorithm
Target prediction of candidate miRNAs from Oryza sativa for silencing the RYMV genome
Genome-wide identification and expression analysis of WNK kinase gene family in rice
A New Technique for Surface Optimization
Metagenomics studies in aquaculture systems: Big data analysis, bioinformatics, machine learning and quantum computing
Isomers of Polycyclic Conjugated Hydrocarbons with Arbitrary Ring Sizes: Generation and Enumeration
Design, synthesis and biological evaluation of novel thiazol-2-yl benzamide derivatives as glucokinase activators
Site mapping and small molecule blind docking reveal a possible target site on the SARS-CoV-2 main protease dimer interface
GanDTI: A multi-task neural network for drug-target interaction prediction
Uncovering the pharmacological mechanism of motherwort ( Leonurus japonicus Houtt.) for treating menstrual disorders: A systems pharmacology approach
Interactions between DNA and the acridine intercalator: A computational study
Interaction of zervamicin IIB with lipid bilayers. Molecular dynamics study
Modelling toxin effects on protein biosynthesis in eukaryotic cells
An application of computer animation in the study of dynamical aspects of nonadiabatic transitions in the Li-H2 system
A Microcomputer Program for the Determination of the Micropores Distribution Functions
A Highly Scalable Parallel Implementation of H.264
Compiler Support for Code Size Reduction Using a Queue-Based Processor
Exploring the Architecture of a Stream Register-Based Snoop Filter
Fast Code Generation for Embedded Processors with Aliased Heterogeneous Registers
Energy Reduction by Systematic Run-Time Reconfigurable Hardware Deactivation
A High Performance Adaptive Miss Handling Architecture for Chip Multiprocessors
Microvisor: A Runtime Architecture for Thermal Management in Chip Multiprocessors
Performance Characterization for the Implementation of Content Addressable Memories Based on Parallel Hashing Memories
Accurate Instruction Pre-scheduling in Dynamically Scheduled Processors
A Cost Model for Partial Dynamic Reconfiguration
Introduction to Part 2
Transactions on High-Performance Embedded Architectures and Compilers V
Transaction Reordering to Reduce Aborts in Software Transactional Memory
Data Layout for Cache Performance on a Multithreaded Architecture
An Approach for Enhancing Inter-processor Data Locality on Chip Multiprocessors
Introduction to Part 3
autopin - Automated Optimization of Thread-to-Core Pinning on Multicore Systems
Power-Aware Dynamic Cache Partitioning for CMPs
Linux Kernel Compaction through Cold Code Swapping
Tiled Multi-Core Stream Architecture
Quick and Practical Run-Time Evaluation of Multiple Program Optimizations
Signature-Based Calibration of Analytical Performance Models for System-Level Design Space Exploration
Hardware/Software Architecture for Real-Time ECG Monitoring and Analysis Leveraging MPSoC Technology
Power-Aware Bus Coscheduling for Periodic Realtime Applications Running on Multiprocessor SoC
Branch Predictor Warmup for Sampled Simulation through Branch History Matching
Introduction to Part 1
Eighth MEDEA Workshop
Improving Branch Prediction by Considering Affectors and Affectees Correlations
A Context-Parameterized Model for Static Analysis of Execution Times
Data Cache Techniques to Save Power and Deliver High Performance in Embedded Systems
Selective Code Compression Scheme for Embedded Systems
Finding and Applying Loop Transformations for Generating Optimized FPGA Implementations
Characterizing Time-Varying Program Behavior Using Phase Complexity Surfaces
Transactions on High-Performance Embedded Architectures and Compilers IV
A Systematic Design Space Exploration Approach to Customising Multi-Processor Architectures: Exemplified Using Graphics Processors
Complexity Effective Bypass Networks
Software-Level Instruction-Cache Leakage Reduction Using Value-Dependence of SRAM Leakage in Nanometer Technologies
Automatic Discovery of Coarse-Grained Parallelism in Media Applications
GCH: Hints for Triggering Garbage Collections
High-Performance Embedded Architecture and Compilation Roadmap
Transactions on High-Performance Embedded Architectures and Compilers I
Efficient Mapping of Streaming Applications for Image Processing on Graphics Cards
Transactions on High-Performance Embedded Architectures and Compilers II
On Two-Layer Brain-Inspired Hierarchical Topologies - A Rent's Rule Approach -
Advanced Packet Segmentation and Buffering Algorithms in Network Processors
A Multithreaded Multicore System for Embedded Media Processing
A Hardware-Accelerated Estimation-Based Power Profiling Unit - Enabling Early Power-Aware Embedded Software Design and On-Chip Power Management
Using Application Bisection Bandwidth to Guide Tile Size Selection for the Synchroscalar Tile-Based Architecture
A Dynamic Reconfigurable Super-VLIW Architecture for a Fault Tolerant Nanoscale Design
Parallelization Schemes for Memory Optimization on the Cell Processor: A Case Study on the Harris Corner Detector
Software Transactional Memory Validation - Time and Space Considerations
Dynamic and On-Line Design Space Exploration for Reconfigurable Architectures
Recruiting Decay for Dynamic Power Reduction in Set-Associative Caches
Prototyping a Configurable Cache/Scratchpad Memory with Virtualized User-Level RDMA Capability
Reexecution and Selective Reuse in Checkpoint Processors
Robust Adaptation to Available Parallelism in Transactional Memory Applications
Fetch Gating Control through Speculative Instruction Window Weighting
A Parallelizing Compiler Cooperative Heterogeneous Multicore Processor Architecture
Combining Edge Vector and Event Counter for Time-Dependent Power Behavior Characterization
CROB: Implementing a Large Instruction Window through Compression
Compiler Directed Issue Queue Energy Reduction
Reconfiguration Strategies for Environmentally Powered Devices: Theoretical Analysis and Experimental Validation
Specializing Cache Structures for High Performance and Energy Conservation in Embedded Systems
High Performance Processor Chips
A Prefetching Algorithm for Multi-speed Disks
Static Cache Partitioning Robustness Analysis for Embedded On-Chip Multi-processors
Finding Extreme Behaviors in Microprocessor Workloads
Cache Sensitive Code Arrangement for Virtual Machine
A Modular Simulator Framework for Network-on-Chip Based Manycore Chips Using UNISIM
Transactions on High-Performance Embedded Architectures and Compilers III
Efficient Partial Roll-Backing Mechanism for Transactional Memory Systems
Constructing Application-Specific Memory Hierarchies on FPGAs
Convergent Compilation Applied to Loop Unrolling
Circular Buffers with Multiple Overlapping Windows for Cyclic Task Graphs
An Efficient and Flexible Task Management for Many Cores
Dynamic Cache Partitioning Based on the MLP of Cache Misses
Vision-Language Pre-Training: Basics, Recent Advances, and Future Trends
Sparse Modeling for Image and Vision Processing
Full-Reference Image Quality Metrics: Classification and Evaluation
Multimodal Foundation Models: From Specialists to General-Purpose Assistants
Deep Learning for Multimedia Forensics
The Appearance of Human Skin: A Survey
Publishing and Consuming 3D Content on the Web: A Survey
Towards Better User Studies in Computer Graphics and Vision
A Fresh Look at Generalized Sampling
Geodesic Methods in Computer Vision and Graphics
Beyond Fairness in Computer Vision: A Holistic Approach to Mitigating Harms and Fostering Community-Rooted Computer Vision Research
Crowdsourcing in Computer Vision
Principles of Appearance Acquisition and Representation
Bilateral Filtering: Theory and Applications
Monocular Model-Based 3D Tracking of Rigid Objects: A Survey
Local Invariant Feature Detectors: A Survey
(Hyper)-Graphs Inference through Convex Relaxations and Move Making Algorithms: Contributions and Applications in Artificial Vision
Object Categorization
Computer Vision for Autonomous Vehicles: Problems, Datasets and State of the Art
Decision Forests: A Unified Framework for Classification, Regression, Density Estimation, Manifold Learning and Semi-Supervised Learning
Deep Learning for Image/Video Restoration and Super-resolution
3D Reconstruction from Multiple Images: Part 1 - Principles
Demystifying Variational Diffusion Models
Learning-based Visual Compression
A Survey of Photometric Stereo Techniques
An Introduction to Neural Data Compression
The Path to Path-Traced Movies
Line Drawings from 3D Models: A Tutorial
Kernel Methods in Computer Vision
Camera Models and Fundamental Concepts Used in Geometric Computer Vision
Multi-View Stereo: A Tutorial
Image and Video Matting: A Survey
An Introduction to Sliced Optimal Transport: Foundations, Advances, Extensions, and Applications
Mesh Parameterization Methods and Their Applications
Image Alignment and Stitching: A Tutorial
Semantic Image Segmentation: Two Decades of Research
Computational Imaging Through Atmospheric Turbulence
Computational Studies of Human Motion: Part 1, Tracking and Motion Synthesis
Modeling and Simulation of Skeletal Muscle for Computer Graphics: A Survey