yusuke1997/dblp-id-title huggingface dataset:
Applying semantic web technologies for phenome-wide scan using an electronic health record linked Biobank
Multiple sampling schemes and deep learning improve active learning performance in drug-drug interaction information retrieval analysis from the literature
EAPB: entropy-aware path-based metric for ontology quality
A unified approach for debugging is-a structure and mappings in networked taxonomies
Comparing generative and extractive approaches to information extraction from abstracts describing randomized clinical trials
MicrO: an ontology of phenotypic and metabolic characters, assays, and culture media found in prokaryotic taxonomic descriptions
Optimized continuous homecare provisioning through distributed data-driven semantic services and cross-organizational workflows
RKB: a Semantic Web knowledge base for RNA
The vertebrate taxonomy ontology: a framework for reasoning across model organism and species phenotypes
Panacea, a semantic-enabled drug recommendations discovery framework
Towards improving phenotype representation in OWL
Inferring gene-to-phenotype and gene-to-disease relationships at Mouse Genome Informatics: challenges and solutions
Representing vision and blindness
Levels and building blocks - toward a domain granularity framework for the life sciences
Network-based analysis reveals distinct association patterns in a semantic MEDLINE-based drug-disease-gene network
BioBLP: a modular framework for learning on multimodal biomedical knowledge graphs
Analysis of risk factor domains in psychosis patient health records
KneeTex: an ontology-driven system for information extraction from MRI reports
Finding relevant free-text radiology reports at scale with IBM Watson Content Analytics: a feasibility study in the UK NHS
Quantitative comparison of mapping methods between Human and Mammalian Phenotype Ontology
Large scale biomedical texts classification: a kNN and an ESA-based approaches
Multiple kernels learning-based biological entity relationship extraction method
Extraction of Adverse Drug Effects from Medical Case Reports
Structuring research methods and data with the research object model: genomics workflows as a case study
TNM-O: ontology support for staging of malignant tumours
The early bird catches the term: combining twitter and news data for event detection and situational awareness
GOMMA: a component-based infrastructure for managing and analyzing life science ontologies and their evolution
Semantic annotation in biomedicine: the current landscape
The Cell Ontology 2016: enhanced content, modularization, and ontology interoperability
Functional coherence metrics in protein families
Normalizing acronyms and abbreviations to aid patient understanding of clinical texts: ShARe/CLEF eHealth Challenge 2013, Task 2
Performance assessment of ontology matching systems for FAIR data
TopFed: TCGA Tailored Federated Query Processing and Linking to LOD
The neurological disease ontology
BioVerbNet: a large semantic-syntactic classification of verbs in biomedicine
tESA: a distributional measure for calculating semantic relatedness
An annotated dataset for extracting gene-melanoma relations from scientific literature
The Software Ontology (SWO): a resource for reproducibility in biomedical data analysis, curation and digital preservation
Supporting the analysis of ontology evolution processes through the combination of static and dynamic scaling functions in OQuaRE
BioHackathon series in 2011 and 2012: penetration of ontology and linked data in life science domains
The African wildlife ontology tutorial ontologies
CSEO - the Cigarette Smoke Exposure Ontology
Ontorat: automatic generation of new ontology terms, annotations, and axioms based on ontology design patterns
CLO: The cell line ontology
Terminology extraction from medical texts in Polish
The Ontology of Biological and Clinical Statistics (OBCS) for standardized and reproducible statistical analysis
Grains, components and mixtures in biomedical ontologies
An ontology-driven tool for structured data acquisition using Web forms
TermGenie - A web application for pattern-based ontology class generation
Automated Patent Categorization and Guided Patent Search using IPC as Inspired by MeSH and PubMed
Erratum to: Towards exergaming commons: composing the exergame ontology for publishing open game data
Executing SADI services in Galaxy
Networks of neuroinjury semantic predications to identify biomarkers for mild traumatic brain injury
Automated SNOMED CT concept and attribute relationship detection through a web-based implementation of cTAKES
A multipurpose TNM stage ontology for cancer registries
Disclosing Main authors and Organisations collaborations in bioprinting through network maps analysis
Negation detection in Swedish clinical text: An adaption of NegEx to Swedish
Using semantics for representing experimental protocols
Standardizing free-text data exemplified by two fields from the Immune Epitope Database
Assessment of NER solutions against the first and second CALBC Silver Standard Corpus
The languages of health in general practice electronic patient records: a Zipf's law analysis
Ambiguity and variability of database and software names in bioinformatics
TypOn: the microbial typing ontology
KLOSURE: Closing in on open-ended patient questionnaires with text mining
ResidueFinder: extracting individual residue mentions from protein literature
SemClinBr - a multi-institutional and multi-specialty semantically annotated corpus for Portuguese clinical NLP tasks
Evaluating drug-drug interaction information in NDF-RT and DrugBank
Semantics in action: a guide for representing clinical data elements with SNOMED CT
Discovering associations between adverse drug events using pattern structures and ontologies
Challenges as enablers for high quality linked data: Insights from the semantic publishing challenge
Data security analysis based on Blockchain Recurrence Qualitative Analysis (BRQA)
Comments on "Researcher bias: The use of machine learning in software defect prediction"
The MODES toolbox: Measurements of Open-ended Dynamics in Evolving Systems
Server side algorithms for WHLK (Watermark, Hardware Parameters and License Key) framework
Are funder Open Access platforms a good idea?
An expert study on hierarchy comparison methods applied to biological taxonomies curation
Cluster analysis and visualization techniques for large datasets in complexome profiling
Mapping irrigated areas using multi-sensor remote sensing data in a Mediterranean environment
Uncertainty modeling process for semantic technology
A local search algorithm for the constrained max cut problem on hypergraphs
Digital scientific notations as a human-computer interface in computer-aided research
Crossing SSH and STEM approaches in a MapDesign course using open data and software
Testing the FAIR metrics on data catalogs
A novel collaborative filtering algorithm by bit mining frequent itemsets
Assessment of spectral properties of Apollo 12 landing site
The opendata geoportal of the Lamma Consortium
A survey on authentication methods for the Internet of Things
A survey of secure middleware for the Internet of Things
An Open source GIS-based tool for economic loss estimation due to flood events
LSTM neural network for textual ngrams
Project level effects of gender on contribution evaluation on GitHub
Interoperability and FAIRness through a novel combination of Web technologies
Multi-token code suggestions using statistical language models
For and against PEGs: Why we need multi-ordered grammars
Parallel and in-process compilation of individuals for genetic programming on GPU
Facial emotion recognition using Min-Max similarity classifier
Frequency components with negative resistance for intellectual measurement systems
An genetic algorithm approach for profiling computational performance measures
Anatomy of a crash repository
Crossing the streams: a framework for streaming analysis of short DNA sequencing reads
Project report: intelligent semantic oriented agent based Search
Impact of restricted forward greedy feature selection technique on bug prediction
Textual analysis or natural language parsing? A software engineering perspective
Data based intervention approach for Complexity-Causality measure
GeoNode: an open source framework to build spatial data infrastructures
Mice tracking using the YOLO algorithm
A fast Iris recognition system through optimum feature extraction
Deep learning for constructing microblog behavior representation to identify social media user's personality
Development of a web-based vegetation spectral library (VSL) for remote sensing research and applications
Influence of the urban morphology on the urban heat island intensity: an approach based on the Local Climate Zone classification
Simulating business processes of manufacturing SMEs on the cloud
GIS-based seismic hazard prediction system for urban earthquake disaster prevention planning
PIsCO: A Performance indicators framework for collection of bioinformatics resource metrics
Exploiting observations and measurement data standard for distributed LTER-Italy freshwater sites. Water quality issues
Curating GitHub for engineered software projects
Suitable reporting for the reproducible research: an added value in the analysis of proteomics data
CREGIS-Q: a GIS tool to support decision making in case of aquifer contamination emergency
Developing science gateways for drug discovery in a grid environment
Open Source for Water Management: including capabilities of MODFLOW-OWHM in the FREEWAT GIS modelling environment
Keys to successful scientific VGI projects
Evaluation of the IEEE 802.11p multi-channel operation in vehicular networks
Research Articles in Simplified HTML: a Web-first format for HTML-based scholarly articles
Anomaly analysis on an open DNS dataset
Ten simple rules for digital data storage
Summer Heat Risk Index: how to integrate recent climatic changes and soil consumption component
A minimal model for explaining the higher ATP production in the Warburg effect
VESPA: Very large-scale Evolutionary and Selective Pressure Analyses
RIdeogram : drawing SVG graphics to visualize and map genome-wide data on the idiograms
An improved human skin detection and localization by using machine learning techniques in RGB and YCbCr color spaces
OSoMe: The IUNI observatory on social media
Mapping ISO metadata standards to codemeta
SymPy: Symbolic computing in Python
Beliefs propagation in log domain: a neural inspired algorithm for machine learning
Hybrid HDFS: decreasing energy consumption and speeding up Hadoop using SSDs
Open educational resources for the validation of global high-resolution land cover maps
Challenges in VGI for scientific projects
An approach to improve the efficiency of apriori algorithm
Speeding-up mutation testing via data compression and state infection
Development of an agent based model illustrating the usage of deferred acceptance algorithm in the admission process
r.avaflow & r.randomwalk: two complementary and comprehensive open source GIS simulation tools for the propagation of rapid geophysical mass flows
Finding and correcting syntax errors using recurrent neural networks
IPOMOEA: Intended package orientation using multi-objective evolutionary algorithm in R
Putting the ghost in the machine: exploring human-machine hybrid virtual patient systems for health professional education
XML schema validation using parsing expression grammars
Derivation of kernel of dynamic support vector machines: Stochastic and deterministic data process
On the impact of sampling frequency on software energy measurements
Resolving the optimal selection of a natural reserve using the particle swarm optimisation by applying transfer functions
How developers debug
Linear time-varying Luenberger observer applied to diabetes
Introduction of seasonality concept in PSF algorithm to improve univariate time series predictions
Information theoretic alignment free variant calling
Impact of the catchment land use on some factors of lakes trophic status: a GIS approach
Evaluating social network extraction for classic and modern fiction literature
How to kill them all: an exploratory study on the impact of code observability on mutation testing
When scholars use Knowledge-Step Forums to create Web-Compended Guides to the literature of their fields, paradigm-shifts will occur in the processes of knowledge creation and in graduate education
Electronic laboratory notebooks in a public-private-partnership
Formatting Open Science: agilely creating multiple document formats for academic manuscripts with Pandoc Scholar
A microservice-based portal for X-ray transient and variable sources
Geometric model of image formation in Scheimpflug cameras
An empirical analysis of the Docker container ecosystem on GitHub
Hotspot analysis: a first prototype Python plugin enabling exploratory spatial data analysis into QGIS
Rethinking the usage and experience of clustering markers in web mapping
Detecting periodicities with Gaussian processes
A survey on approaches to the protection of personal data gathered by IoT devices
Efficient duplicate rate estimation from subsamples of sequencing libraries
Improving rule based classification using harmony search
Operationalizing Central Place Theory and Central Flow Theory with mobile phone data
What should mobile app developers do about machine learning and energy?
Making of fusion genes in cancer: An in-silico study of mechanism of chromosomal translocations
An architecture for context-aware reactive systems based on run-time semantic models
How are functionally similar code clones different?
Order and metric geometry compatible stochastic processing
Interplay between peptide bond geometry and local conformation: molecular dynamics analyses
Prioritizing computer security controls for home users
Forecasting at Scale
A redundancy-removing feature selection algorithm for nominal data
ProPheno: An online dataset for completely characterizing the human protein-phenotype landscape in biomedical literature
Identification of protein pockets and cavities by Euclidean Distance Transform
An exploratory study of the state of practice of performance testing in Java-based open source projects
Duplicate Question Detection in Stack Overflow: A Reproducibility Study
Finding pattern in biochemical reaction networks - a sub-graph mining approach
bioPDFX: preparing PDF scientific articles for biomedical text mining
Lessons from between the white lines for isolated data scientists
113 times Tomcat: A dataset
Comparison of natural language processing tools for automatic gene ontology annotation of scientific literature
Phylogenetic analysis of software evolution, a case study: VE&MINT
Parsing multi-ordered grammars with the Gray algorithm
Sharing analysis in the Pawns compiler
CodonGenie: optimised ambiguous codon design tools
Crowdsourcing the discovery of software repositories in an educational environment
Multilayered model of speech
Managing contamination delay to improve Timing Speculation architectures
Finding the optimal bayesian network given a constraint graph
Automation in clinical data collection in obstetrics - Enabling pooled IPD studies for fetal heart rate and activity monitoring
A survey of Chinese Interpreting Studies: Who influences who ... and why?
Identifying frequent patterns in biochemical reaction networks - a workflow
A crime data analysis framework with geographical information support for intelligence led policing
Taking R to its limits: 70+ tips
A contrast of meta and metafor packages for meta-analyses in R
Preliminary experiments with the Andean Condor Algorithm to solve problems of Continuous Domains
Reproducible Research is like riding a bike
Improving the quality of low SNR images using high SNR images
GreenScaler: Automatically training software energy models with big data
OSGeo events at EGU General Assemblies: Making Open Science a Reality
Towards a dashboard environment for repeating and reusing research
Trade-off Service Portfolio Planning - A Case Study on Mining the Android App Market
Leveraging heterogeneous Cultural Heritage data to promote tourism
Multiplication over Extended Galois Field: A New Approach to Find Monic Irreducible Polynomials over Galois Field GF(p^q)
The impact of test case summaries on bug fixing performance: An empirical investigation
Wrangling categorical data in R
Virtual and remote laboratories augment self learning and interactions: Development, deployment and assessments with direct and online feedback
Comprehensive family-based SNV association analysis shows new alleles associated to mealy traits in Prunus persica
Pharmacophore modeling, virtual computational screening and biological evaluation studies
Extending MetAMOS - new methods and new integrations
Geospatial Big Data processing in an open source distributed computing environment
Complexity curve: a graphical measure of data complexity and classifier performance
Transforming the Web into an open-access knowledge-repository with better knowledge-creation and faster publication, by means of software for MetaLinks and for AEC-Forums that enhance post-graduate education
GIZAChain: e-Government Interoperability Zone Alignment, based on blockchain technology
Finding patterns in biochemical reaction networks
Data security issues in the realm of mobile cloud computing: A survey
Implementation and validity of the long jump knowledge-based system: Case of the approach run phase
A probabilistic model to recover individual genomes from metagenomes
Book Review: Applied Time Series Analysis With R. Second Edition
What do programmers know about the energy consumption of software?
A Socratic epistemology for verbal emotional intelligence
OnoM@p : a Spatial Data Infrastructure dedicated to noise monitoring based on volunteers measurements
Stability analysis of MTopGO for module identification in PPI networks
Automated annotation of corals in natural scene images using multiple texture representations
Image based effective feature generation for protein structural class and ligand binding prediction
Tolerance-based interaction: A new model targeting opinion formation and diffusion in social networks
Species-specific audio detection: A comparison of three template-based classification algorithms using random forests
Emulation of surgical fluid interactions in real-time
What an entangled Web we weave: An information-centric approach to time-evolving socio-technical systems
Programming languages popularity and implications to testing programmable logic controllers
Probabilistic graph models for landscape genetics
AliTV-interactive visualization of whole genome comparisons
Exploiting freely available imagery to improve land cover characterization and shallow landslide detection
System-on-chip sensor fusion front-end self-healing design for network-on-chip digital communications
Properties of distance spaces with power triangle inequalities
Exploring genetic programming systems with MAP-Elites
Software-defined networks: A walkthrough guide from occurrence To data plane fault tolerance
Feature selection on a dataset of protein families: from exploratory data analysis to statistical variable importance
Whole yeast model: what and why
Somatic inhibition controls dendritic selectivity in a sparse coding network of spiking neurons
Engineering permanence in finite systems
SNF: Synthesizing high performance NFV service chains
Fast Access to Remote Objects 2.0 A renewed gateway to ENEAGRID distributed computing resources
Tech report: Orchestrating your cloud orchestra: Model driven development of cloud deployment and orchestration for distributed computer music instruments
Geothematic open data in Umbria region
Visualising higher-dimensional space-time and space-scale objects as projections to ℝ 3
Collecting reliable clades using the Greedy Strict Consensus Merger
An algebraic representation for tree alignment of RNA pseudoknotted structures
Development of a WEB-GIS real-time dynamic landslide risk scenarios procedure - Umbria Region civil protection early warning system, a case study
A New Method for Ecoacoustics? Toward the Extraction and Evaluation of Ecologically-Meaningful Sound Objects using Sparse Coding Methods
4, 8, 32, 64 bit Substitution Box generation using Irreducible or Reducible Polynomials over Galois Field GF(p q )
Deep learning for conflicting statements detection in text
Technical note: how to rationally compare the performances of different machine learning models?
The ever-changing face of Chinese Interpreting Studies: a social network analysis
Automatically generating psychiatric case notes from digital transcripts of doctor-patient conversations using text mining
Zbrowse: an interactive GWAS results browser
Towards a standard model for research in agent-based modeling and simulation
Request type prediction for Web robot and Internet of Things traffic
Human-Borg dynamics during a cybernetic alien invasion
How diverse is your team? Investigating gender and nationality diversity in GitHub teams
Deployment of coordinated worm-hole peer in MANETs
PGxO: A very lite ontology to reconcile pharmacogenomic knowledge units
An interactive tool for teaching map projections
The solution of large-scale Minimum Cost SAT Problem as a tool for data analysis in bioinformatics
The man-machine integration era
How R helps Airbnb make the most of its data
Enhancing DEMs for geomorphometric research through digital filtering
Secure trustless text processing of sensitive documents
Discrete time-cost tradeoff model for optimizing multi-mode construction project resource allocation
From photo-geology to 3D geological models. An open source approach
Creating an open geospatial kinetic wall for science mediation: Preliminary results from the GeoWall project
City Focus: A web-based interactive 2D and 3D GIS application to find the best place in a city, using open data and open source software
The Modern Research Data Portal: A design pattern for networked, data-intensive science
Integrating active learning and crowdsourcing into large-scale supervised landcover mapping algorithms
Application of Graph Theory to the elaboration of personal genomic data for genealogical research
Forensic analysis of video steganography tools
E-Foto: an educational photogrammetric workstation
Green software engineering: the curse of methodology
Raising the status of software in research: A survey-based evaluation of the Software Sustainability Institute Fellowship Programme
IoT and Robotics: a synergy
Integration of the MODFLOW Lak7 package in the FREEWAT GIS modelling environment
Data decomposition: from independent component analysis to sparse representations
A comprehensive RNA-Seq pipeline includes meta-analysis, interactivity and automatic reporting
Event-driven industrial robot control architecture for the Adept V+ platform
A systematic literature review of how mutation testing supports test activities
An artificial immune system approach to automated program verification: Towards a theory of undecidability in biological computing
PROV-man: A PROV-compliant toolkit for provenance management
An open source software package for primality testing of numbers of the form p2^n+1, with no constraints on the relative sizes of p and 2 n
Towards a metadata-driven multi-community research data management service
A multi prototype classification algorithm and its application to multi class diagnostics
Correlation between predictability index and the error performance of customer baseline load (CBL) calculation
Achieving human and machine accessibility of cited data in scholarly publications
Results from an ethnographically-informed study in the context of test-driven development
Evaluation of the parallel performance of the TRIGRS v2.1 model for rainfall-induced landslides
Multitask regression for condition-specific prioritization of miRNA targets in transcripts
Formatting Open Science: agile creation of multiple document types by writing academic manuscripts in pandoc markdown
LISAM: an open source GIS-based model for liveability spatial assessment
Genetic characterization of colorectal cancer using a next generation sequencing approach to identify a specific pattern of somatic alterations in tumors arising from different anatomic sites
Strategies and difficulties in assembling highly recombinogenic plant organelle genomes: a case study