yusuke1997/dblp-id-title huggingface dataset:
Runtime application of Hybrid-Asbru clinical guidelines
caCORE version 3: Implementation of a model driven, service-oriented architecture for semantic interoperability
Usability evaluation of a medication reconciliation tool: Embedding safety probes to assess users' detection of medication discrepancies
A framework for a distributed, hybrid, multiple-ontology clinical-guideline library, and automated guideline-support tools
Parea : Multi-view ensemble clustering for cancer subtype discovery
Fuzzy c-means clustering with prior biological knowledge
Mining fall-related information in clinical notes: Comparison of rule-based and novel word embedding-based machine learning approaches
Self-prediction of relations in GO facilitates its quality auditing
Feature generation and representations for protein-protein interaction classification
Average correlation clustering algorithm (ACCA) for grouping of co-regulated genes with similar pattern of variation in their expression values
Data mining techniques utilizing latent class models to evaluate emergency department revisits
Twitter K-H networks in action: Advancing biomedical literature for drug search
Method selection and adaptation for distributed monitoring of infectious diseases for syndromic surveillance
Knowledge based word-concept model estimation and refinement for biomedical text mining
A structured approach to recording AIDS-defining illnesses in Kenya: A SNOMED CT based solution
Multivariate analysis of the population representativeness of related clinical studies
Comparing information extraction techniques for low-prevalence concepts: The case of insulin rejection by patients
Synergy between medical informatics and bioinformatics: facilitating genomic medicine for future health care
Scenarios, personas and user stories: User-centered evidence-based design representations of communicable disease investigations
GLA-Net: A global-local attention network for automatic cataract classification
Ensembles of natural language processing systems for portable phenotyping solutions
Systems-based biological concordance and predictive reproducibility of gene set discovery methods in cardiovascular disease
Corrigendum to "Extraction of temporal relations from clinical free text: A systematic review of current approaches" [J. Biomed. Inf. 108 (2020) 103488]
A continuous-time Markov model approach for modeling myelodysplastic syndromes progression from cross-sectional data
Diagnostic rate estimation from Medicare records: Dependence on claim numbers and latent clinical features
Special issue on fairness and inclusion in biomedical informatics research: technical and social perspectives
A transformer-based framework for temporal health event prediction with graph-enhanced representations
Location-enhanced syntactic knowledge for biomedical relation extraction
Data mining and machine learning in cancer survival research: An overview and future recommendations
Comparison of segmentation-free and segmentation-dependent computer-aided diagnosis of breast masses on a public mammography dataset
A novel machine learning model based on sparse structure learning with adaptive graph regularization for predicting drug side effects
Learning structured medical information from social media
A cardiovascular simulator tailored for training and clinical uses
Computer technologies to integrate medical treatments to manage multimorbidity
LATTE: A knowledge-based method to normalize various expressions of laboratory test results in free text of Chinese electronic health records
Optimizing warfarin dosing using deep reinforcement learning
HCLS 2.0/3.0: Health care and life sciences data mashup using Web 2.0/3.0
Social media based surveillance systems for healthcare using machine learning: A systematic review
Diagnostic fidelity of the Z-buffer segmentation algorithm: preliminary assessment based on intracranial aneurysm detection
SemanticSCo: A platform to support the semantic composition of services for gene expression analysis
Proclets in healthcare
Designing an over-the-counter consumer decision-making tool for older adults
Understanding spatial language in radiology: Representation framework, annotation, and spatial relation extraction from chest X-ray reports using deep learning
ARCH: Large-scale knowledge graph via aggregated narrative codified health records analysis
Defining and measuring completeness of electronic health records for secondary use
Word sense disambiguation across two domains: Biomedical literature and clinical notes
Correlation between videogame mechanics and executive functions through EEG analysis
Desiderata for discoverability and FAIR adoption of health data hubs
Similarity Measurement Method for the Classification of Architecturally Differentiated Images
An effective feature extraction method based on GDS for atrial fibrillation detection
Reasons for declining computerized insulin protocol recommendations: Application of a framework
Interpretability of time-series deep learning models: A study in cardiovascular patients admitted to Intensive care unit
An architecture for a continuous, user-driven, and data-driven application of clinical guidelines and its evaluation
Understanding pivotal experiences in behavior change for the design of technologies for personal wellbeing
Role and experience determine decision support interface requirements in a neonatal intensive care environment
Explainable synthetic image generation to improve risk assessment of rare pediatric heart transplant rejection
Multi-focus cluster labeling
Supporting SNOMED CT postcoordination with knowledge graph embeddings
Human intention recognition for trauma resuscitation: An interpretable deep learning approach for medical process data
A two step method to identify clinical outcome relevant genes with microarray data
An automated ultra-fast, memory-efficient, and accurate method for viral genome classification
Towards Chinese clinical named entity recognition by dynamic embedding using domain-specific knowledge
COVID-19 modelling by time-varying transmission rate associated with mobility trend of driving via Apple Maps
Improving language models for radiology speech recognition
HEART: Learning better representation of EHR data with a heterogeneous relation-aware transformer
Network analysis of human diseases using Korean nationwide claims data
An autonomous mobile system for the management of COPD
Phylogenetics by likelihood: Evolutionary modeling as a tool for understanding the genome
Erratum to "Cross-terminology mapping challenges: A demonstration using medication terminological systems" [J. Biomed. Inform. (2012) 613-625]
A privacy preserving protocol for tracking participants in phase I clinical trials
Discovering treatment pattern in Traditional Chinese Medicine clinical cases by exploiting supervised topic model and domain knowledge
Multivariate image analysis in biomedicine
Development of a benchmark corpus to support the automatic extraction of drug-related adverse effects from medical case reports
Using software agents to preserve individual health data confidentiality in micro-scale geographical analyses
Mapping patient path in the Pediatric Emergency Department: A workflow model driven approach
The genome-enabled electronic medical record
Clinical natural language processing for secondary uses
An approach to improve LOINC mapping through augmentation of local test names
A generic minimization random allocation and blinding system on web
Can teamwork and situational awareness (SA) in ED resuscitations be improved with a technological cognitive aid? Design and a pilot study of a team situation display
A clinician friendly data warehouse oriented toward narrative reports: Dr. Warehouse
Scaling up biomedical vision-language models: Fine-tuning, instruction tuning, and multi-modal learning
Bayesian evolutionary hypergraph learning for predicting cancer clinical outcomes
Cognitive systems at the point of care: The CREDO program
Summary of Product Characteristics content extraction for a safe drugs usage
Interpretable deep neural networks for advancing early neonatal birth weight prediction using multimodal maternal factors
Fine-tuning ERNIE for chest abnormal imaging signs extraction
Development of an instrument for measuring clinicians' power perceptions in the workplace
The ngram chief complaint classifier: A novel method of automatically creating chief complaint classifiers based on international classification of diseases groupings
Simulation of metastatic progression using a computer model including chemotherapy and radiation therapy
Distant supervision for medical concept normalization
Ontology-guided feature engineering for clinical text classification
Graph neural networks for clinical risk prediction based on electronic health records: A survey
Tailored motivational message generation: A model and practical framework for real-time physical activity coaching
Bio*Medical informatics and genomic medicine: Research and training
Using statistical and knowledge-based approaches for literature-based discovery
Practical experience with the maintenance and auditing of a large medical ontology
Continuous time Bayesian network classifiers
The REDCap consortium: Building an international community of software platform partners
Deep learning prediction models based on EHR trajectories: A systematic review
Improvement of intervention information detection for automated clinical literature screening during systematic review
Sexual Behavior, Heterosexual Transmission, and the Spread of HIV in Sub-Saharan Africa: A Simulation Study ,
Interpreting a recurrent neural network's predictions of ICU mortality risk
From expert-derived user needs to user-perceived ease of use and usefulness: A two-phase mixed-methods evaluation framework
Clustering clinical models from local electronic health records based on semantic similarity
Assessing data quality and the variability of source data verification auditing methods in clinical research settings
Caption-augmented reasoning model with Hierarchical rank LoRA finetuing for medical visual question Answering
Classification of breast cancer using microarray gene expression data: A survey
Artificial Neural Networks Compared to Factor Analysis for Low-Dimensional Classification of High-Dimensional Body Fat Topography Data of Healthy and Diabetic Subjects
Estimating summary statistics for electronic health record laboratory data for use in high-throughput phenotyping algorithms
The analyses of human inherited disease and tissue-specific proteins in the interaction network
KDE Bioscience: Platform for bioinformatics analysis workflows
Differential splicing analysis based on isoforms expression with NBSplice
MorphoCol: An ontology-based knowledgebase for the characterisation of clinically significant bacterial colony morphologies
Improving the utility of MeSH® terms using the TopicalMeSH representation
Finding disease similarity based on implicit semantic similarity
A knowledge graph embedding based approach to predict the adverse drug reactions using a deep neural network
Development of the nursing problem list subset of SNOMED CT®
A detailed analysis of the Arden Syntax expression grammar
CeRTS: certainty retrieval token search in large language model clinical information extraction
Development, implementation, and a cognitive evaluation of a definitional question answering system for physicians
Integrating machine learning predictions for perioperative risk management: Towards an empirical design of a flexible-standardized risk assessment tool
Combining knowledge- and data-driven methods for de-identification of clinical narratives
PregAN-NET: Addressing Class Imbalance with GANs in Interpretable Computational Framework for Predicting Safety Profile of Drugs Considering Adverse Reactions During Pregnancy
Evaluation of a flowchart-based EHR query system: A case study of RetroGuide
Prediction and evaluation of combination pharmacotherapy using natural language processing, machine learning and patient electronic health records
Query bot for retrieving patients' clinical history: A COVID-19 use-case
Integrating statistical and visual analytic methods for bot identification of health-related survey data
Disease networks and their contribution to disease understanding: A review of their evolution, techniques and data sources
Sharing clinical decisions for multimorbidity case management using social network and open-source tools
Inferring actual treatment pathways from patient records
The Counterfactual χ-GAN: Finding comparable cohorts in observational health data
DR.BENCH: Diagnostic Reasoning Benchmark for Clinical Natural Language Processing
Contextual label sensitive gated network for biomedical event trigger extraction
A review on deep learning approaches in healthcare systems: Taxonomies, challenges, and open issues
Exploring the impact of online information signals in leveraging the economic returns of physicians
Human-centered computing in health information systems: Part 2: Evaluation
On the query reformulation technique for effective MEDLINE document retrieval
Predicting pharmacotherapeutic outcomes for type 2 diabetes: An evaluation of three approaches to leveraging electronic health record data from multiple sources
Development of comprehensive annotation criteria for patients' states from clinical texts
Deterministic projection by growing cell structure networks for visualization of high-dimensionality datasets
The Learning Healthcare System: Where are we now? A systematic review
HPO2Vec+: Leveraging heterogeneous knowledge resources to enrich node embeddings for the Human Phenotype Ontology
Discharge summary hospital course summarisation of in patient Electronic Health Record text with clinical concept guided deep pre-trained Transformer models
DiseaSE: A biomedical text analytics system for disease symptom extraction and characterization
Predicting relations between SOAP note sections: The value of incorporating a clinical information model
Unleashing genotypes in epidemiology - A novel method for managing high throughput information
From user needs to system specifications: Multi-disciplinary thematic seminars as a collaborative design method for development of health information systems
Determining the difficulty of Word Sense Disambiguation
Tree disagreement: Measuring and testing incongruence in phylogenies
Outpatient physician billing data for age and setting specific syndromic surveillance of influenza-like illnesses
Automatic analysis of medical dialogue in the home hemodialysis domain: Structure induction and summarization
A comprehensive data level analysis for cancer diagnosis on imbalanced data
Integrating Mendelian randomization and literature-mined evidence for breast cancer risk factors
Prediction of influenza vaccination outcome by neural networks and logistic regression
An ensemble heterogeneous classification methodology for discovering health-related knowledge in social media messages
A systematic comparison of feature space effects on disease classifier performance for phenotype identification of five diseases
A tongue features fusion approach to predicting prediabetes and diabetes with machine learning
Ethical issues in public health informatics: implications for system design when sharing geographic information
Improving record linkage performance in the presence of missing linkage data
Toward the European Health Data Space: The IMPaCT-Data secure infrastructure for EHR-based precision medicine research
A scoring model to detect abusive medical institutions based on patient classification system: Diagnosis-related group and ambulatory patient group
Hui-Huang Hsu, Advanced Data Mining Technologies in Bioinformatics, Editors: Idea Group Publishing, pp 239
Causal inference for time series datasets with partially overlapping variables
The use of sequential pattern mining to predict next prescribed medications
Attention-based synthetic data generation for calibration-enhanced survival analysis: A case study for chronic kidney disease using electronic health records
The effects of data sources, cohort selection, and outcome definition on a predictive model of risk of thirty-day hospital readmissions
Conceptual framework and documentation standards of cystoscopic media content for artificial intelligence
The EU-ADR corpus: Annotated drugs, diseases, targets, and their relationships
k-Neighborhood decentralization: A comprehensive solution to index the UMLS for large scale knowledge discovery
The Field Representation Language
Cohort selection for clinical trials using multiple instance learning
Pilot evaluation of a method to assess prescribers' information processing of medication alerts
Valley-Forecast: Forecasting Coccidioidomycosis incidence via enhanced LSTM models trained on comprehensive meteorological data
Causal inference for observational longitudinal studies using deep survival models
Assessing inclusion and representativeness on digital platforms for health education: Evidence from YouTube
A methodology for the design and development of gamified mobile apps for monitoring cancer survivors
Personal discovery in diabetes self-management: Discovering cause and effect using self-monitoring data
Mining microarray data to predict the histological grade of a breast cancer
Prediction task guided representation learning of medical codes in EHR
CNV-ROC: A cost effective, computer-aided analytical performance evaluator of chromosomal microarrays
Research on machine learning issues in biomedical informatics modeling
Quality assurance of chemical ingredient classification for the National Drug File - Reference Terminology
A categorical analysis of coreference resolution errors in biomedical texts
Challenges in clinical natural language processing for automated disorder normalization
LGTRL-DE: Local and Global Temporal Representation Learning with Demographic Embedding for in-hospital mortality prediction
Tracking and analysis of discourse dynamics and polarity during the early Corona pandemic in Iran
Ontology-based clinical information extraction from physician's free-text notes
Quality assessment of data discrimination using self-organizing maps
Recommendations for the design, implementation and evaluation of social support in online communities, networks, and groups
Automated extraction of potential migraine biomarkers using a semantic graph
Evaluation of techniques for increasing recall in a dictionary approach to gene and protein name identification
Repeatable process for extracting health data from HL7 CDA documents
In search of common ground in handoff documentation in an Intensive Care Unit
Size matters: How population size influences genotype-phenotype association studies in anonymized data
Causal discovery from sequential data in ALS disease based on entropy criteria
Rich learning representations for human activity recognition: How to empower deep feature learning for biological time series
Professor Mario Stefanelli (1945-2010)
Using conceptual work products of health care to design health IT
A comparative study of recent large language models on generating hospital discharge summaries for lung cancer patients
Criteria2Query 3.0: Leveraging generative large language models for clinical trial eligibility query generation
Workflow mining and outlier detection from clinical activity logs
Kinase inhibition-related adverse events predicted from in vitro kinome and clinical trial data
Text-mining approach to evaluate terms for ontology development
Topic detection using paragraph vectors to support active learning in systematic reviews
Support versus corroboration
OntoCR: A CEN/ISO-13606 clinical repository based on ontologies
From centralized to ad-hoc knowledge base construction for hypotheses generation
HLA amino acid Mismatch-Based risk stratification of kidney allograft failure using a novel Machine learning algorithm
MAM: Flexible Monte-Carlo Agent based model for modelling COVID-19 spread
Modeling healthcare data using multiple-channel latent Dirichlet allocation
A Bayesian system to detect and characterize overlapping outbreaks
ChronoMedIt - A computational quality audit framework for better management of patients with chronic conditions
Re-ordered fuzzy conformance checking for uncertain clinical records
Prognostic models based on patient snapshots and time windows: Predicting disease progression to assisted ventilation in Amyotrophic Lateral Sclerosis
Rare disease diagnosis using knowledge guided retrieval augmentation for ChatGPT
Flexible, cluster-based analysis of the electronic medical record of sepsis with composite mixture models
Probabilistic modeling personalized treatment pathways using electronic health records
The role of explainability in creating trustworthy artificial intelligence for health care: A comprehensive survey of the terminology, design choices, and evaluation strategies
Using clinical Natural Language Processing for health outcomes research: Overview and actionable suggestions for future advances
Evaluating the granularity balance of hierarchical relationships within large biomedical terminologies towards quality improvement
Classification of smoking cessation status with a backpropagation neural network
Local spatial obesity analysis and estimation using online social network sensors
Extraction of events and temporal expressions from clinical narratives
The use of fault reporting of medical equipment to identify latent design flaws
An open-set semi-supervised multi-task learning framework for context classification in biomedical texts
Validating discovery in literature-based discovery
Crowd control: Effectively utilizing unscreened crowd workers for biomedical data annotation
Development of machine translation technology for assisting health communication: A systematic review
Wavelets and Imaging Informatics: A Review of the Literature
A domain analysis model for eIRB systems: Addressing the weak link in clinical research informatics
EHR-BERT: A BERT-based model for effective anomaly detection in electronic health records
User-centered semantic harmonization: A case study
Implementation and evaluation of a multivariate abstraction-based, interval-based dynamic time-warping method as a similarity measure for longitudinal medical records
Knowledge-based automated planning system for StereoElectroEncephaloGraphy: A center-based scenario
Obtaining clinical term embeddings from SNOMED CT ontology
ISeeU: Visually interpretable deep learning for mortality prediction inside the ICU
Crowdsourcing Twitter annotations to identify first-hand experiences of prescription drug use
Curbing false discovery rates in interpretation of genome-wide expression profiles
HAMDA: Hybrid Approach for MiRNA-Disease Association prediction
Creating an ignorance-base: Exploring known unknowns in the scientific literature
Analysis of clinical prognostic variables for Chronic Lymphocytic Leukemia decision-making problems
An attention-based framework for integrating WSI and genomic data in cancer survival prediction
Adapting the stage-based model of personal informatics for low-resource communities in the context of type 2 diabetes
A user-centered model for designing consumer mobile health (mHealth) applications (apps)
Technical desiderata for the integration of genomic data into Electronic Health Records
Use abstracted patient-specific features to assist an information-theoretic measurement to assess similarity between medical cases
The state of the art in text mining and natural language processing for pharmacogenomics
Patient safety classifications, taxonomies and ontologies, part 2: A systematic review on content coverage
Construction of diagnosis system and gene regulatory networks based on microarray analysis
Systematic review of approaches to use of neighborhood-level risk factors with clinical data to predict clinical risk and recommend interventions
A scheme for inferring viral-host associations based on codon usage patterns identifies the most affected signaling pathways during COVID-19
Identifying task groupings for multi-task learning using pointwise V-usable information
RAHM: Relation augmented hierarchical multi-task learning framework for reasonable medication stocking
R.A.P.I.D. (Root Aggregated Prioritized Information Display): A single screen display for efficient digital triaging of medical reports