yusuke1997/dblp-id-title huggingface dataset:
CONTIGuator: a bacterial genomes finishing tool for structural insights on draft genomes
biobambam: tools for read pair collation based algorithms on BAM files
EST-PAC a web package for EST annotation and protein sequence prediction
Genome display tool: visualizing features in complex data sets
Identifying large sets of unrelated individuals and unrelated markers
EC2KEGG: a command line tool for comparison of metabolic pathways
Inmembrane, a bioinformatic workflow for annotation of bacterial cell-surface proteomes
iPBAvizu: a PyMOL plugin for an efficient 3D protein structure superimposition approach
EEGgui: a program used to detect electroencephalogram anomalies after traumatic brain injury
FASH: A web application for nucleotides sequence search
Using the value of Lin's concordance correlation coefficient as a criterion for efficient estimation of areas of leaves of eelgrass from noisy digital images
MZPAQ: a FASTQ data compression tool
PREdator: a python based GUI for data analysis, evaluation and fitting
The GlycanBuilder: a fast, intuitive and flexible software tool for building and displaying glycan structures
Publication quality 2D graphs with less manual effort due to explicit use of dual coordinate systems
MagiCMicroRna: a web implementation of AgiMicroRna using shiny
Computing and graphing probability values of pearson distributions: a SAS/IML macro
Gbrowse Moby: a Web-based browser for BioMoby Services
MALINA: a web service for visual analytics of human gut microbiota whole-genome metagenomic reads
A methodology for projecting hospital bed need: a Michigan case study
ParaHaplo 3.0: A program package for imputation and a haplotype-based whole-genome association study using hybrid parallel computing
Second generation registry framework
DOG-SPOT database for comprehensive management of dog genetic research data
Nephele: genotyping via complete composition vectors and MapReduce
PatentMatrix: an automated tool to survey patents related to large sets of genes or proteins
CombAlign: a code for generating a one-to-many sequence alignment from a set of pairwise structure-based sequence alignments
CyNetworkBMA: a Cytoscape app for inferring gene regulatory networks
BLASTPLOT: a PERL module to plot next generation sequencing NCBI-BLAST results
popRange: a highly flexible spatially and temporally explicit Wright-Fisher simulator
A Perl toolkit for LIMS development
Sig2BioPAX: Java tool for converting flat files to BioPAX Level 3 format
Implementing a new EPR lineshape parameter for organic radicals in carbonaceous matter
Microbial Diagnostic Array Workstation (MDAW): a web server for diagnostic array data storage, sharing and analysis
SAMMate: a GUI tool for processing short read alignments in SAM/BAM format
Implementation of the Rank-Weighted Co-localization (RWC) algorithm in multiple image analysis platforms for quantitative analysis of microscopy images
BioPatRec: A modular research platform for the control of artificial limbs based on pattern recognition algorithms
DEApp: an interactive web interface for differential expression analysis of next generation sequence data
Easyworm: an open-source software tool to determine the mechanical properties of worm-like chains
NFU-Enabled FASTA: moving bioinformatics applications onto wide area networks
A dedicated database system for handling multi-level data in systems biology
The MERG Suite: Tools for discovering competencies and associated learning resources
GRIP: A web-based system for constructing Gold Standard datasets for protein-protein interaction prediction
IHE cross-enterprise document sharing for imaging: interoperability testing software
PageRank as a method to rank biomedical literature by importance
ROVER variant caller: read-pair overlap considerate variant-calling software applied to PCR-based massively parallel sequencing datasets
Pspace: a program that assesses protein space
[COMMODE] a large-scale database of molecular descriptors using compounds from PubChem
LitDB - Keeping Track of Research Papers From Your Institute Made Simple
Epigrass: a tool to study disease spread in complex networks
LSID Tester, a tool for testing Life Science Identifier resolution services
Dispelling myths about rare disease registry system development
A proof of the DBRF-MEGN method, an algorithm for deducing minimum equivalent gene networks
MEGADOCK 3.0: a high-performance protein-protein interaction prediction software using hybrid parallel computing for petascale supercomputing environments
ParaHaplo: A program package for haplotype-based whole-genome association study using parallel computing
FlexDM: Simple, parallel and fault-tolerant data mining using WEKA
The Shivplot: a graphical display for trend elucidation and exploratory analysis of microarray data
Bio-samtools: Ruby bindings for SAMtools, a library for accessing BAM files containing high-throughput sequence alignments
Log: : ProgramInfo: A Perl module to collect and log data for bioinformatics pipelines
OCPAT: an online codon-preserved alignment tool for evolutionary genomic analysis of protein coding sequences
A new tool for prioritization of sequence variants from whole exome sequencing data
MOtoNMS: A MATLAB toolbox to process motion data for neuromusculoskeletal modeling and simulation
MADAM - An open source meta-analysis toolbox for R and Bioconductor
PyPedia: using the wiki paradigm as crowd sourcing environment for bioinformatics protocols
Combining de novo and reference-guided assembly with scaffold_builder
Purposeful selection of variables in logistic regression
goSTAG: gene ontology subtrees to tag and annotate genes within a set
TRX-LOGOS - a graphical tool to demonstrate DNA information content dependent upon backbone dynamics in addition to base sequence
2DKD: a toolkit for content-based local image search
Welcome to Source Code for Biology and Medicine
Simple tools for assembling and searching high-density picolitre pyrophosphate sequence data
eUTOPIA: solUTion for Omics data PreprocessIng and Analysis
SNIT: SNP identification for strain typing
NET: a new framework for the vectorization and examination of network data
CrypticIBDcheck: an R package for checking cryptic relatedness in nominally unrelated individuals
RMol: A Toolset for Transforming SD/Molfile structure information into R Objects
Correction: Dispelling myths about rare disease registry system development
Changing computational research. The challenges ahead
Simulating pedigrees ascertained for multiple disease-affected relatives
HitKeeper, a generic software package for hit list management
IPCAPS: an R package for iterative pruning to capture population structure
Methylation plotter: a web tool for dynamic visualization of DNA methylation data
Layout-aware text extraction from full-text PDF of scientific articles
Algorithm and software to automatically identify latency and amplitude features of local field potentials recorded in electrophysiological investigation
TrigNER: automatically optimized biomedical event trigger recognition on scientific documents
MmPalateMiRNA, an R package compendium illustrating analysis of miRNA microarray data
Parallel biocomputing
PureCN: copy number calling and SNV classification using targeted short read sequencing
LocusTrack: Integrated visualization of GWAS results and genomic annotation
BISON: bio-interface for the semi-global analysis of network patterns
cljam: a library for handling DNA sequence alignment/map (SAM) with parallel processing
Boolean network simulations for life scientists
Onco-STS: a web-based Laboratory Information Management System for sample and analysis tracking in oncogenomic experiments
MIA - A free and open source software for gray scale medical image analysis
PathNet: A tool for pathway analysis using topological information
LimsPortal and BonsaiLIMS: development of a lab information management system for translational medicine
DADOS-Prospective: an open source application for Web-based prospective data collection
plot2groups: an R package to plot scatter points for two groups of values
A generic schema and data collection forms applicable to diverse entomological studies of mosquitoes
Flow : Statistics, visualization and informatics for flow cytometry
MOSAL: software tools for multiobjective sequence alignment
H3Africa: a tipping point for a revolution in bioinformatics, genomics and health research in Africa
A bedr way of genomic interval processing
Knowledge Driven Variable Selection (KDVS) - a new approach to enrichment analysis of gene signatures obtained from high-throughput data
VIRAPOPS2 supports the influenza virus reassortments
Wormpath: searching for molecular interaction networks in Caenorhabditis elegans
How Not to Be a Bioinformatician
The Multiscale Systems Immunology project: software for cell-based immunological simulation
Tools for efficient epistasis detection in genome-wide association study
Three algorithms and SAS macros for estimating power and sample size for logistic models with one or more independent variables of interest in the presence of covariates
A software pipeline for processing and identification of fungal ITS sequences
TagDigger: user-friendly extraction of read counts from GBS and RAD-seq data
SLIMarray: Lightweight software for microarray facility management
HAMSTER: visualizing microarray experiments as a set of minimum spanning trees
EntrezAJAX: direct web browser access to the Entrez Programming Utilities
PFClust: an optimised implementation of a parameter-free clustering algorithm
ProSave: an application for restoring quantitative data to manipulated subsets of protein lists
KBWS: an EMBOSS associated package for accessing bioinformatics web services
Wndchrm - an open source utility for biological image analysis
AdmixKJump: identifying population structure in recently diverged groups
JobCenter: an open source, cross-platform, and distributed job queue management system optimized for scalability and versatility
OSPACS: Ultrasound image management system
Annokey: an annotation tool based on key term search of the NCBI Entrez Gene database
SOV_refine: A further refined definition of segment overlap score and its significance for protein structure similarity
GenePattern Flow Cytometry Suite
Public Data Visualization: Analyzing Local Running Statistics on Situated Displays
Visualizing Group Structures in Graphs: A Survey
Multiple Light Source Estimation in a Single Image
Learning 3D Scene Synthesis from Annotated RGB-D Images
Comparison of Modern Omnidirectional Precise Shadowing Techniques Versus Ray Tracing
Temporally Coherent and Artistically Intended Stylization of Feature Lines Extracted from 3D Models
Tunnel-Free Supercover 3D Polygons and Polyhedra
Progressive Transient Photon Beams
Cinematographic Camera Diffusion Model
DragPoser: Motion Reconstruction from Variable Sparse Tracking Signals via Latent Space Optimization
An Algorithm for Perspective Viewing of Objects Represented by Octrees
Flower reconstruction from a single photo
Text-Guided Interactive Scene Synthesis with Scene Prior Guidance
Volumetric Billboards
Crack-free rendering of dynamically tesselated B-rep models
Proposals for Configurable Models of Graphics Systems
Graphics, Bifurcation, Order and Chaos
Fast Polyhedral Cell Sorting for Interactive Rendering of Unstructured Grids
A Simple Algorithm for Maximal Poisson-Disk Sampling in High Dimensions
Perception-driven Accelerated Rendering
Space Discretization for Efficient Human Navigation
Graph Bundling by Kernel Density Estimation
Geometry-Aware Volume-of-Fluid Method
Displacement Mapping using Scan Conversion Hardware Architectures
Optimizing Grid Layouts for Level-of-Detail Exploration of Large Data Collections
Enhanced Texture-Based Terrain Synthesis on Graphics Hardware
A Method of Displaying Transformed Picture Rectangles Using GKS Raster Functions
Polynomial Optics: A Construction Kit for Efficient Ray-Tracing of Lens Systems
Multiresolution Tiling
Intrinsic Light Field Images
SMARTPAPER: An Interactive and User Friendly Sketching System
Fast Four-Way Parallel Radix Sorting on GPUs
Managing Spatial Selections With Contextual Snapshots
Roominoes: Generating Novel 3D Floor Plans From Existing 3D Rooms
Visualizing Validation of Protein Surface Classifiers
Parallel Ray Tracing Based upon a Multilevel Topological Knowledge Acquisition of the Scene
A Browser for Large Directed Graphs
Bayesian Point Cloud Reconstruction
StructuReiser: A Structure-preserving Video Stylization Method
Deep Learning-Based Unsupervised Human Facial Retargeting
TopoPlan: a topological path planner for real time human navigation under floor and ceiling constraints
Perception Based Color Image Difference
Data-Driven Crowd Motion Control With Multi-Touch Gestures
Reconstructing 3D Shape, Albedo and Illumination from a Single Face Image
2013 Cover Image: Prism
An Efficient Circle-Drawing Algorithm
ShieldTester: Cell-to-Cell Visibility Test for Surface Occluders
Narrow Band FLIP for Liquid Simulations
Jointly Optimized Regressors for Image Super-resolution
Exploratory Visualization of Animal Kinematics Using Instantaneous Helical Axes
Generalized eXtended Finite Element Method for Deformable Cutting via Boolean Operations
Illustrative Parallel Coordinates
ConcaveCubes: Supporting Cluster-based Geographical Visualization in Large Data Scale
Local Editing of Procedural Models
A Survey of Volumetric Illumination Techniques for Interactive Volume Rendering
Efficient Perspective-Correct 3D Gaussian Splatting Using Hybrid Transparency
Sharpening Out of Focus Images using High-Frequency Transfer
Enhancing image quality prediction with self-supervised visual masking
Project DIGIS Building Interactive Applications by Direct Manipulation
Polyline-sourced Geodesic Voronoi Diagrams on Triangle Meshes
Atomistic Visualization of Mesoscopic Whole-Cell Simulations Using Ray-Casted Instancing
NeuroLens: Data-Driven Camera Lens Simulation Using Neural Networks
Fast, Exact, Linear Booleans
A Survey of 3D Interaction Techniques
Towards Realism in Facial Image Transformation: Results of a Wavelet MRF Method
Progressive Point-Light-Based Global Illumination
A Survey of Personalized Interior Design
Approximate on-Surface Distance Computation using Quasi-Developable Charts
Zippy: A Framework for Computation and Visualization on a GPU Cluster
Mobility-Trees for Indoor Scenes Manipulation
Temporal Blending for Adaptive SPH
Multiplane Video Stabilization
The Design of an Inexpensive Very High Resolution Scan Camera System
Constructing L∞ Voronoi Diagrams in 2D and 3D
Manifold-valued Thin-Plate Splines with Applications in Computer Graphics
Flow Curves: an Intuitive Interface for Coherent Scene Deformation
Evaluating View Management for Situated Visualization in Web-based Handheld AR
Fast Grasp Synthesis for Various Shaped Objects
Subdivision Surface Tesselation on the Fly using a versatile Mesh Data Structure
Light montage for perceptual image enhancement
EHR STAR: The State-Of-the-Art in Interactive EHR Visualization
Aesthetic Rating and Color Suggestion for Color Palettes
COPERNICUS: Context-Preserving Engine for Route Navigation with Interactive User-modifiable Scaling
VOLMAP: a Large Scale Benchmark for Volume Mappings to Simple Base Domains
Fitting Sharp Features with Loop Subdivision Surfaces
Comprehensive Facial Performance Capture
VortexTransformer: End-to-End Objective Vortex Detection in 2D Unsteady Flow Using Transformers
Beyond Catmull-Clark? A Survey of Advances in Subdivision Surface Methods
Fused Multi-Volume DVR using Binary Space Partitioning
An Exhaustive Error-Bounding Algorithm for Hierarchical Radiosity
Mesh Decomposition with Cross-Boundary Brushes
Topological Construction and Visualization of Higher Order 3D Vector Fields
Constructing and Evaluating Visualisation Task Classifications: Process and Considerations
Cross-Shape Attention for Part Segmentation of 3D Point Clouds
A Comparison of Tabular PDF Inversion Methods
Shape Matching via Quotient Spaces
Image-based Aging Using Evolutionary Computing
Visualnostics: Visual Guidance Pictograms for Analyzing Projections of High-dimensional Data
Oriented geometric Objects in Computer Graphics and Numerical Control
Controllable Anime Image Editing via Probability of Attribute Tags
3D Computational Morphology
Real-time homogenous translucent material editing
Concentric Spherical Representation for Omnidirectional Soft Shadow
Survey of Inter-Prediction Methods for Time-Varying Mesh Compression
Towards Light-Weight Portrait Matting via Parameter Sharing
A Paradigm for the Robust Design of Algorithms for Geometric Modeling
Surface-aware Mesh Texture Synthesis with Pre-trained 2D CNNs
Directional Discretized Occluders for Accelerated Occlusion Culling
Real-Time Frequency Adjustment of Images and Videos
VisuaLint: Sketchy In Situ Annotations of Chart Construction Errors
Finding Syntactic Structures from Human Motion Data
N-Buffers for efficient depth map query
VMP: Versatile Motion Priors for Robustly Tracking Motion on Physical Characters
A Procedural Approach to Modelling Virtual Climbing Plants With Tendrils
Soft Maps Between Surfaces
Incremental Deformation Subspace Reconstruction
Notes on the Mathematics of the PHIGS Viewing Pipeline
Moving Picture Synthesis at Linkoping University
Recursive analytic spherical harmonics gradient for spherical lights
Visualization in Astrophysics: Developing New Methods, Discovering Our Universe, and Educating the Earth
Scalable Partitioning for Parallel Position Based Dynamics
Fast Collision Detection for Skeletally DeformableModels
Transparency in Interactive Technical Illustrations
A Vector Approach for Global Illumination in Ray Tracing
Interactive Optimization of Generative Image Modelling using Sequential Subspace Search and Content-based Guidance
Effective Techniques to Visualize Filament-Surface Relationships
Linear Time Stable PD Controllers for Physics-based Character Animation
Fragment-Parallel Composite and Filter
Style Mixer: Semantic-aware Multi-Style Transfer Network
AppFusion: Interactive Appearance Acquisition Using a Kinect Sensor
Continuum Traffic Simulation
Vectorizing Line Drawings of Arbitrary Thickness via Boundary-based Topology Reconstruction
Anisotropic Filtering of Non-Linear Surface Features
Multiresolution for Algebraic Curves and Surfaces using Wavelets
A Review of Digital Terrain Modeling
TailorMe: Self-Supervised Learning of an Anatomically Constrained Volumetric Human Shape Model
Graphics related activities at NCSDCT, Bombay
Designing Camera Networks by Convex Quadratic Programming
Guided Exploration of Industrial Sensor Data
Raycasting of Light Field Galleries from Volumetric Data
Fast Generation and Surface Structuring Methods for Terrain and Other Natural Phenomena
FlexyFont: Learning Transferring Rules for Flexible Typeface Synthesis
Feature Curve Co-Completion in Noisy Data
A Proposal for a Distributed Model of GKS Based on Prolog
Robust Physics-based Motion Retargeting with Realistic Body Shapes
FARM: Functional Automatic Registration Method for 3D Human Bodies
IsoMatch: Creating Informative Grid Layouts
Stress-Constrained Thickness Optimization for Shell Object Fabrication
Photorealistic rendering of mixed reality scenes
Key Time Steps Selection for Large-Scale Time-Varying Volume Datasets Using an Information-Theoretic Storyboard
Gridded Visualization of Statistical Trees for High-Dimensional Multipartite Data in Systems Genetics
Hybrid Particle-grid Modeling for Multi-scale Droplet/Spray Simulation
Better Understanding through Formal Specification
FontRNN: Generating Large-scale Chinese Fonts via Recurrent Neural Network
Quantum Coin Method for Numerical Integration
Generating Euler Diagrams Through Combinatorial Optimization
Visually Assessing 1-D Orderings of Contiguous Spatial Polygons
A Perceptual Shape Loss for Monocular 3D Face Reconstruction
GANtlitz: Ultra High Resolution Generative Model for Multi-Modal Face Textures
Consistent Volumetric Discretizations Inside Self-Intersecting Surfaces
Story Albums: Creating Fictional Stories From Personal Photograph Sets
EACS: Effective Avoidance Combination Strategy
Efficient Large Scale Acquisition of Building Interiors
Reactive Gaze during Locomotion in Natural Environments
Visual Analysis of Defects in Glass Fiber Reinforced Polymers for 4DCT Interrupted In situ Tests
A Surface Subdivision Scheme Based on Four-Directional S 1 3 Non-Box Splines
A Framework For Image Warping
Volumetric Cell-and-Portal Generation
Tuning Subdivision by Minimising Gaussian Curvature Variation Near Extraordinary Vertices
The Perception of Correlation in Scatterplots
Real-Time Ray Tracing of Micro-Poly Geometry with Hierarchical Level of Detail
Rationalization of Triangle-Based Point-Folding Structures
Hardware Lighting and Shading: a Survey
Photon Beam Diffusion: A Hybrid Monte Carlo Method for Subsurface Scattering
A Semi-Lagrangian CIP Fluid Solver without Dimensional Splitting
Hardware Adaptive High-Order Interpolation for Real-Time Graphics
The Fractal Nature of an Ecological Model
SmallWorlds: Visualizing Social Recommendations
LazyBrush: Flexible Painting Tool for Hand-drawn Cartoons
Guiding Image Manipulations using Shape-appearance Subspaces from Co-alignment of Image Collections
Single-pass stratified importance resampling
Decomposing Images into Layers with Advanced Color Blending
A Stylized Approach for Pencil Drawing from Photographs
StratomeX: Visual Analysis of Large-Scale Heterogeneous Genomics Data for Cancer Subtype Characterization
Discrete Calabi Flow: A Unified Conformal Parameterization Method
Memory-Efficient Interactive Online Reconstruction From Depth Image Streams
Modeling Complex Unfoliaged Trees from a Sparse Set of Images
Hair Interpolation for Portrait Morphing
On Demand Solid Texture Synthesis Using Deep 3D Networks
Biorthogonal Wavelets Based on Interpolatory Subdivision
Virtual Spherical Gaussian Lights for Real-time Glossy Indirect Illumination
Towards Quantitative Visual Analytics with Structured Brushing and Linked Statistics
Bounded Radiosity - Illumination on General Surfaces and Clusters
Re-coloring Images for Gamuts of Lower Dimension
Fashion Transfer: Dressing 3D Characters from Stylized Fashion Sketches
A Progressive Tri-level Segmentation Approach for Topology-Change-Aware Video Matting
Polyhedral Surface Modeling with a Diffusion System
Designing N -PolyVector Fields with Complex Polynomials
Eurographics 2009 Workshop on 3D Object Retrieval (EG 3DOR'09) in Cooperation with ACM SIGGRAPH Munich, GermanyMarch 29, 2009
Stylized and Performative Gaze for Character Animation
Semi-MoreGAN: Semi-supervised Generative Adversarial Network for Mixture of Rain Removal
Privacy Preserving Visualization: A Study on Event Sequence Data
Visualizing the Evolution of Communities in Dynamic Graphs
Articulated Object Reconstruction and Markerless Motion Capture from Depth Video
A New Ward BRDF Model with Bounded Albedo
The State of the Art in Integrating Machine Learning into Visual Analytics
STAR - Laplacian Spectral Kernels and Distances for Geometry Processing and Shape Analysis
Symmetry Hierarchy of Man-Made Objects
Preconceptions and Individual Differences in Understanding Visual Metaphors
Intrinsic Decompositions for Image Editing
Progressive Multi-Jittered Sample Sequences
Report on the MICROGRAPHICS Workshop
A Practical and Controllable Hair and Fur Model for Production Path Tracing
Out-of-Core Simplification and Crack-Free LOD Volume Rendering for Irregular Grids
Fast Generation of Approximate Blue Noise Point Sets
Narrow-Band Screen-Space Fluid Rendering
MultiResGNet: Approximating Nonlinear Deformation via Multi-Resolution Graphs
A Characterization of Interactive Visual Data Stories With a Spatio-Temporal Context
Area-Preserving Parameterizations for Spherical Ellipses
Depth-of-Field Rendering by Pyramidal Image Processing
Texture Synthesis From Photographs
Tree Visualisation and Navigation Clues for Information Visualisation
Interactive Disassembly Planning for Complex Objects
Interactive Curve Constrained Functional Maps
Method for Calculation of Sky Light Luminance Aiming at an Interactive Architectural Design
Black is Green: Adaptive Color Transformation For Reduced Ink Usage
A Comprehensive Survey on Sampling-Based Image Matting
Cubical Marching Squares: Adaptive Feature Preserving Surface Extraction from Volume Data