yusuke1997/dblp-id-title huggingface dataset:
Enhancing generalization of medical image segmentation via game theory-based domain selection
A new framework for the selection of tag SNPs by multimarker haplotypes
Identifying gene expression programs in single-cell RNA-seq data using linear correlation explanation
A multi-faceted approach to characterizing user behavior and experience in a digital mental health intervention
Traversing the tangle: Algorithms and applications for cophylogenetic studies
Working with the HL7 metamodel in a Model Driven Engineering context
Porting a lexicalized-grammar parser to the biomedical domain
New JBI policy emphasizes clinically-meaningful novel machine learning methods
A method for analyzing inpatient care variability through physicians' orders
Predicting microRNA-disease associations using label propagation based on linear neighborhood similarity
An artificial intelligence framework for compensating transgressions and its application to diet management
Automated extraction of decision rules for leptin dynamics - A rough sets approach
Developing libraries of semantically-augmented graphics as visual standards for biomedical information systems
Augmented intelligence for multimodal virtual biopsy in breast cancer using generative artificial intelligence
Information bottleneck based incremental fuzzy clustering for large biomedical data
Augmenting aer2vec: Enriching distributed representations of adverse event report data with orthographic and lexical information
Data mining and visualization for decision support and modeling of public health-care resources
Language-agnostic deep learning framework for automatic monitoring of population-level mental health from social networks
Mining and exploring care pathways from electronic medical records with visual analytics
Classifying obstructive sleep apnea using smartphones
Clinical outcome prediction using observational supervision with electronic health records and audit logs
Identifying barriers to the effective use of clinical reminders: Bootstrapping multiple methods
Towards a goal-oriented methodology for clinical-guideline-based management recommendations for patients with multimorbidity: GoCom and its preliminary evaluation
Treatment initiation prediction by EHR mapped PPD tensor based convolutional neural networks boosting algorithm
Comparing the historical limits method with regression models for weekly monitoring of national notifiable diseases reports
Real-time data analysis in health monitoring systems: A comprehensive systematic literature review
OpenFlyData: An exemplar data web integrating gene expression data on the fruit fly Drosophila melanogaster
Status of clinical gene sequencing data reporting and associated risks for information loss
Multiple predictively equivalent risk models for handling missing data at time of prediction: With an application in severe hypoglycemia risk prediction for type 2 diabetes
A hierarchical fuzzy rule-based approach to aphasia diagnosis
Mamba-enhanced disease semantic knowledge graph for interpretable automatic ICD coding
Language inference-based learning for Low-Resource Chinese clinical named entity recognition using language model
Robust gene signatures from microarray data using genetic algorithms enriched with biological pathway keywords
Ontology-based surgical workflow recognition and prediction
Natural language processing to extract medical problems from electronic clinical documents: Performance evaluation
Lexical patterns, features and knowledge resources for coreference resolution in clinical notes
Predicting censored survival data based on the interactions between meta-dimensional omics data in breast cancer
Evaluating and mitigating bias in machine learning models for cardiovascular disease prediction
Combining usability evaluations to highlight the chain that leads from usability flaws to usage problems and then negative outcomes
VisualDecisionLinc: A visual analytics approach for comparative effectiveness-based clinical decision support in psychiatry
Residual LSTM layered CNN for classification of gastrointestinal tract diseases
Assessing the reliability of an automated dose-rounding algorithm
Efficient management of multi-version clinical guidelines
Health literacy screening instruments for eHealth applications: A systematic review
Evaluating the Bias, type I error and statistical power of the prior Knowledge-Guided integrated likelihood estimation (PIE) for bias reduction in EHR based association studies
An interpretable machine learning approach to multimodal stress detection in a simulated office environment
An ontology for Autism Spectrum Disorder (ASD) to infer ASD phenotypes from Autism Diagnostic Interview-Revised data
Technical desiderata for the integration of genomic data with clinical decision support
The value of Retrospective and Concurrent Think Aloud in formative usability testing of a physician data query tool
GatorCLR: Personalized predictions of patient outcomes on electronic health records using self-supervised contrastive graph representation
A hierarchical strategy to minimize privacy risk when linking "De-identified" data in biomedical research consortia
High-throughput alternative splicing detection using dually constrained correspondence analysis (DCCA)
Distinguishing surgical behavior by sequential pattern discovery
Using insurance claims to predict and improve hospitalizations and biologics use in members with inflammatory bowel diseases
Using information theory to optimize a diagnostic threshold to match physician-ordering practice
Classifying social determinants of health from unstructured electronic health records using deep learning-based natural language processing
A Gentle Introduction to Support Vector Machines in Biomedicine, Alexander Statnikov, Constantin F. Aliferis, Douglas P. Hardin, Isabelle Guyon. World Scientific (2013). Vols. 1(200 p.) and 2 (212 p.)
Predicting temporal propagation of seasonal influenza using improved gaussian process model
Toward an ontology-based framework for clinical research databases
Spatial and Temporal Distribution Enhancement of Movement-Related Brain Macropotentials
Patient Safety, Potential Adverse Drug Events, and Medical Device Design: A Human Factors Engineering Approach
Intra-operative decision making: More than meets the eye
Assigning clinical codes with data-driven concept representation on Dutch clinical free text
ADAPT: Approach to Develop context-Aware solutions for Personalised asthma managemenT
Content-based histopathology image retrieval using a kernel-based semantic annotation framework
Object-oriented regression for building predictive models with high dimensional omics data from translational studies
idse-HE: Hybrid embedding graph neural network for drug side effects prediction
Making work visible for electronic phenotype implementation: Lessons learned from the eMERGE network
An adaptable navigation strategy for Virtual Microscopy from mobile platforms
Annotating temporal information in clinical narratives
Risk factor detection for heart disease by applying text analytics in electronic medical records
Mining Big Data in biomedicine and health care
Playing smallball: Approaches to evaluating pilot health information exchange systems
Characterizing workflow for pediatric asthma patients in emergency departments using electronic health records
Predicting colorectal surgical complications using heterogeneous clinical data and kernel methods
Anonymizing datasets with demographics and diagnosis codes in the presence of utility constraints
Computing disease incidence, prevalence and comorbidity from electronic medical records
One-shot distributed algorithms for addressing heterogeneity in competing risks data across clinical sites
Reuse of termino-ontological resources and text corpora for building a multilingual domain ontology: An application to Alzheimer's disease
Optimal marker placement in hadrontherapy: Intelligent optimization strategies with augmented Lagrangian pattern search
Developing a framework for digital objects in the Big Data to Knowledge (BD2K) commons: Report from the Commons Framework Pilots workshop
COVID-19 and mental disorders in healthcare Personnel: A novel framework to develop Personas from an online survey
A data-driven method to detect adverse drug events from prescription data
JBI moves to new publishing models
The RareDis corpus: A corpus annotated with rare diseases, their signs and symptoms
Adaptive feature squeeze network for nuclear cataract classification in AS-OCT image
Overview of the 2022 n2c2 shared task on contextualized medication event extraction in clinical notes
A cognitive approach for design of a multimedia informed consent video and website in pediatric research
Text classification for assisting moderators in online health communities
Augmented Reality Simulator for Training in Two-Dimensional Echocardiography
Reviewer acknowledgement 2024
Assertion modeling and its role in clinical phenotype identification
Transformer-based models for ICD-10 coding of death certificates with Portuguese text
Integrating a new knowledge organisation system for monoclonal antibodies for therapeutic use authorised in Europe into HeTOP terminology-ontology server
Enhancing early autism prediction based on electronic records using clinical narratives
Comparing risks of alternative medical diagnosis using Bayesian arguments
A practical perspective on the concordance index for the evaluation and selection of prognostic time-to-event models
Extending the Fellegi-Sunter probabilistic record linkage method for approximate field comparators
A cloud-based framework for large-scale traditional Chinese medical record retrieval
Cognitive processes as integrative component for developing expert decision-making systems: A workflow centered framework
Unsupervised grammar induction and similarity retrieval in medical language processing using the Deterministic Dynamic Associative Memory (DDAM) model
MetabolitePredict: A de novo human metabolomics prediction system and its applications in rheumatoid arthritis
An annotated corpus from biomedical articles to construct a drug-food interaction database
Medical Data Privacy Handbook, A. Gkoulalas-Divanis, G. Loukides. Springer International Publishing, Switzerland (2015) 832 pp., ISBN: 978-3-319-23633-9
Prediction of vascular tissue engineering results with artificial neural networks
An overview of biomedical entity linking throughout the years
HybridRanker: Integrating network topology and biomedical knowledge to prioritize cancer candidate genes
Detecting goals of care conversations in clinical notes with active learning
Usability standards meet scenario-based design: Challenges and opportunities
Using scenarios and personas to enhance the effectiveness of heuristic usability evaluations for older adults and their care team
Restricted natural language based querying of clinical databases
Tracing and cataloguing knowledge in an e-health cardiology environment
SPeC: A Soft Prompt-Based Calibration on Performance Variability of Large Language Model in Clinical Notes Summarization
Development of simulation optimization methods for solving patient referral problems in the hospital-collaboration environment
PALIREL, a Computer Program for Analyzing Particle-to-Membrane Relations, with Emphasis on Electron Micrographs of Immunocytochemical Preparations and Gold Labeled Molecules
Modular design, application architecture, and usage of a self-service model for enterprise data delivery: The Duke Enterprise Data Unified Content Explorer (DEDUCE)
AI-driven approach for creating and evaluating a synthetic dataset for Medication Errors
Considering complexity in healthcare systems
Multi-ethnic Imputation System (MI-System): A genotype imputation server for high-dimensional data
Drug-Drug interaction extraction using a position and similarity fusion-based attention mechanism
Cell Image Segmentation with Kernel-Based Dynamic Clustering and an Ellipsoidal Cell Shape Model
An approach for the semantic interoperability of ISO EN 13606 and OpenEHR archetypes
Infectious Disease Informatics: Syndromic Surveillance for Public Health and Bio-Defense, Hsinchun Chen, Daniel Zeng, Ping Yan. Springer (2010)
Synergistic effect of different levels of genomic data for cancer clinical outcome prediction
Assessing gait dysfunction severity in Parkinson's Disease using 2-Stream Spatial-Temporal Neural Network
JLCRB: A unified multi-view-based joint representation learning for CircRNA binding sites prediction
Letter to Editor (Response from author): Toward a universal electronic health record system
A data-driven epidemic model with human mobility and vaccination protection for COVID-19 prediction
Review of Temporal Reasoning in the Clinical Domain for Timeline Extraction: Where we are and where we need to be
The Ontology of Clinical Research (OCRe): An informatics foundation for the science of clinical research
Driven to distraction: The nature and apparent purpose of interruptions in critical care and implications for HIT
Ontological labels for automated location of anatomical shape differences
Workflow and intervention times of MR-guided focused ultrasound - Predicting the impact of new techniques
Graph-based abstractive biomedical text summarization
Inductive creation of an annotation schema for manually indexing clinical conditions from emergency department reports
An automatic system to identify heart disease risk factors in clinical texts over time
A novel approach for predicting microRNA-disease associations by unbalanced bi-random walk on heterogeneous network
Semantic transference for enriching multilingual biomedical knowledge resources
An open source corpus and automatic tool for section identification in Spanish health records
Cost prediction for ischemic heart disease hospitalization: Interpretable feature extraction using network analysis
Padé approximant meets federated learning: A nearly lossless, one-shot algorithm for evidence synthesis in distributed research networks with rare outcomes
Propagation source identification of infectious diseases with graph convolutional networks
Design of a PC-Based System for Time-Domain and Spectral Analysis of Heart Rate Variability
Human disease MiRNA inference by combining target information based on heterogeneous manifolds
MedKA: A knowledge graph-augmented approach to improve factuality in medical Large Language Models
Situation-Based Access Control: Privacy management via modeling of patient data access scenarios
Increasing fall risk awareness using wearables: A fall risk awareness protocol
Predicting age by mining electronic medical records with deep learning characterizes differences between chronological and physiological age
The role of fine-grained annotations in supervised recognition of risk factors for heart disease from EHRs
Computational prediction of the bioactivity potential of proteomes based on expert knowledge
Digital Phenotyping of Mental Health using multimodal sensing of multiple situations of interest: A Systematic Literature Review
Massive integrative gene set analysis enables functional characterization of breast cancer subtypes
Non-negative matrix factorization temporal topic models and clinical text data identify COVID-19 pandemic effects on primary healthcare and community health in Toronto, Canada
Monitoring Obstructive Sleep Apnea by means of a real-time mobile system based on the automatic extraction of sets of rules through Differential Evolution
Selecting a smartwatch for trials involving older adults with neurodegenerative diseases: A researcher's framework to avoid hidden pitfalls
Inferring the patient's age from implicit age clues in health forum posts
Call for papers: Deep phenotyping for Precision Medicine
Extracting lung cancer staging descriptors from pathology reports: A generative language model approach
Medication information extraction using local large language models
Combining expert knowledge and knowledge automatically acquired from electronic data sources for continued ontology evaluation and improvement
Mining sequential patterns for protein fold recognition
Enhancing performance of protein and gene name recognizers with filtering and integration strategies
Q-CHAT-NAO: A robotic approach to autism screening in toddlers
Journal's cover
Intelligent data analysis in biomedicine
Gene set enrichment ensemble using fold change data only
Efficient strabismus diagnosis from small samples: Harnessing spatial features for improved accuracy
KGiA: Drug repurposing through disease-aware knowledge graph augmentation
Achieving trust in health-behavior-change artificial intelligence apps (HBC-AIApp) development: A multi-perspective guide
A new approach to the assessment of the quality of predictions of transcription factor binding sites
Attention-based bidirectional long short-term memory networks for extracting temporal relationships from clinical discharge summaries
A practical approach towards causality mining in clinical text using active transfer learning
Identifying well-formed biomedical phrases in MEDLINE® text
A Bi-level representation learning model for medical visual question answering
Biomedical Informatics in Translational Research, Hai Hu, Richard J. Mural, Michael N. Liebman (Eds.). Artech House (2008)
FeARH: Federated machine learning with anonymous random hybridization on electronic medical records
Transforming semi-structured life science diagrams into meaningful domain ontologies with DiDOn
MKCL: Medical Knowledge with Contrastive Learning model for radiology report generation
Formalizing MedDRA to support semantic reasoning on adverse drug reaction terms
Useful blunders: Can automated speech recognition errors improve downstream dementia classification?
Domain adaption of parsing for operative notes
Special Issue on Auditing of Terminologies
Exploiting the contextual cues for bio-entity name recognition in biomedical literature
A deep learning approach for medication disposition and corresponding attributes extraction
A hierarchical clustering and data fusion approach for disease subtype discovery
Contextualized medication information extraction using Transformer-based deep learning architectures
The virtual dissecting room: Creating highly detailed anatomy models for educational purposes
Sequential patterns mining and gene sequence visualization to discover novelty from microarray data
Controlled Auxotonic Twitch in Papillary Muscle: A New Computer-Based Control Approach
Using automatically extracted information from mammography reports for decision-support
Structure-aware siamese graph neural networks for encounter-level patient similarity learning
Comparative analysis of a novel disease phenotype network based on clinical manifestations
Leveraging GPT-4 for food effect summarization to enhance product-specific guidance development via iterative prompting
Evolution of the Sequence Ontology terms and relationships
A novel feature selection approach for biomedical data classification
A Part-Of-Speech term weighting scheme for biomedical information retrieval
"Hey assistant, how can I become a donor?" The case of a conversational agent designed to engage people in blood donation
Ontological modeling of electronic health information exchange
SigPhi-Med: A lightweight vision-language assistant for biomedicine
Improving search over Electronic Health Records using UMLS-based query expansion through random walks
Facilitating biomedical researchers' interrogation of electronic health record data: Ideas from outside of biomedical informatics
Incorporating temporal EHR data in predictive models for risk stratification of renal function deterioration
In defense of the Desiderata
Impact of expert knowledge on the detection of patients at risk of antimicrobial therapy failure by clinical decision support systems
Safety-driven design of machine learning for sepsis treatment
What can natural language processing do for clinical decision support?
Video-assisted smart health monitoring for affliction determination based on fog analytics
REDCap on FHIR: Clinical Data Interoperability Services
A Hybrid Input-Output Approach to Model Metabolic Systems: An Application to Intracellular Thiamine Kinetics
Retrieval augmentation of large language models for lay language generation
A Bayesian derived network of breast pathology co-occurrence
Evaluating performance of early warning indices to predict physiological instabilities
A data recipient centered de-identification method to retain statistical attributes
An attention-based multi-task model for named entity recognition and intent analysis of Chinese online medical questions
Toward automated e-cigarette surveillance: Spotting e-cigarette proponents on Twitter
A Simple Algorithm for Identifying Negated Findings and Diseases in Discharge Summaries
ICPPNet: A semantic segmentation network model based on inter-class positional prior for scoliosis reconstruction in ultrasound images
Evaluation of Measures of Technical Image Quality for Intracranial Magnetic Resonance Angiography
Classification of Nasal Inspiratory Flow Shapes by Attributed Finite Automata
Quality evaluation of cancer study Common Data Elements using the UMLS Semantic Network
Multiple retrieval case-based reasoning for incomplete datasets
Deep learning for electronic health records: A comparative review of multiple deep neural architectures
Evaluating public health uses of health information exchange
A systematic review on machine learning approaches in the diagnosis and prognosis of rare genetic diseases
Towards Machine-FAIR: Representing software and datasets to facilitate reuse and scientific discovery by machines
Benefit-aware early prediction of health outcomes on multivariate EEG time series
Explainable decision support through the learning and visualization of preferences from a formal ontology of antibiotic treatments
Data protection-compliant broad consent for secondary use of health care data and human biosamples for (bio)medical research: Towards a new German national standard
Corrigendum to "Linguistic summarization of in-home sensor data" [J. Biomed. Inf. 96 (2019) 103240]
Drug repositioning with metapath guidance and adaptive negative sampling enhancement
Principled estimation and evaluation of treatment effect heterogeneity: A case study application to dabigatran for patients with atrial fibrillation
Translating standards into practice: Experiences and lessons learned in biomedicine and health care
Adapting machine learning techniques to censored time-to-event health record data: A general-purpose approach using inverse probability of censoring weighting
Knowledge-enhanced Parameter-efficient Transfer Learning with METER for medical vision-language tasks
Explorative data analysis techniques and unsupervised clustering methods to support clinical assessment of Chronic Obstructive Pulmonary Disease (COPD) phenotypes
Automated depression analysis using convolutional neural networks from speech
Formal nursing terminology systems: a means to an end
Statistical file matching of flow cytometry data
Face mask detection using deep learning: An approach to reduce risk of Coronavirus spread
A medical diagnostic tool based on radial basis function classifiers and evolutionary simulated annealing
Advancing healthcare analytics: a thematic review of machine learning, health informatics, and real-world data applications
Dementia medical screening using mobile applications: A systematic review with a new mapping model
Identifying non-elliptical entity mentions in a coordinated NP with ellipses
A secure and efficiently searchable health information architecture
Human factors engineering: A tool for medical device evaluation in hospital procurement decision-making
IMIPMF: Inferring miRNA-disease interactions using probabilistic matrix factorization
Disambiguation of PharmGKB drug-disease relations with NDF-RT and SPL
Factorization machines and deep views-based co-training for improving answer quality prediction in online health expert question-answering services
Facilitating the development of cross-platform mHealth applications for chronic supportive care and a case study
Sentiment analysis of clinical narratives: A scoping review
A novel fitness function in genetic programming for medical data classification