yusuke1997/dblp-id-title huggingface dataset:
Human resource management and organisation decision optimisation based on data mining
A weighted Local Least Squares Imputation method for missing value estimation in microarray gene expression data
Ensemble classification for gene expression data based on parallel clustering
Identification of glioma cancer-alerted gene markers based on a diagnostic outcome correlation analysis preferential approach
Identification of potential biomarkers of esophageal squamous cell carcinoma using community detection algorithms
Text analysis of MEDLINE for discovering functional relationships among genes: evaluation of keyword extraction weighting schemes
CNV-LDC: an optimised method for copy number variation discovery in low depth of coverage data
Finding optimal control policy in probabilistic Boolean Networks with hard constraints by using integer programming and dynamic programming
Smart variant filtering
Integrative analysis of molecular genetic targets and pathways in colorectal cancer through screening large-scale microarray data
Identifying disease candidate genes via large-scale gene network analysis
Assessment of length distributions between non-coding and coding sequences amongst two model organisms
A hybrid-ensemble based framework for microarray data gene selection
A compressed sensing based two-stage method for detecting epistatic interactions
Molecular phylogeny analysis using correlation distance and spectral distance
Genome-wide discovery of miRNAs using ensembles of machine learning algorithms and logistic regression
A comparative-based phylogenetic study in the evolution of 16S rRNA and rad a genes in Archaea
Weighted fusion regularisation and predicting microbial interactions with vector autoregressive model
Tracking multiple interacting subcellular structure by sequential Monte Carlo method
Randomised sequential and parallel algorithms for efficient quorum planted motif search
Dual pipeline technique for detecting sepsis from photoplethysmography
Predicting survival outcomes in ovarian cancer using gene expression data
Sensitivity-controlled event trigger identification in multi-level biomedical context
Shape-based retrieval of CNV regions in read coverage data
Improvement in protein-coding region identification based on sliding window trigonometric fast transforms using Singular Value Decomposition
Gene-gene interaction analysis for quantitative trait using cluster-based multifactor dimensionality reduction method
AliBiMotif: Integrating alignment and biclustering to unravel transcription factor binding sites in DNA sequences
Discovering breast cancer drug candidates from biomedical literature
Deriving enhanced geographical representations via similarity-based spectral analysis: predicting colorectal cancer survival curves in Iowa
Skin cancer detection and segmentation utilising LadderNet by stock exchange white shark optimisation enabled deep learning
Predicting protein - protein interfaces as clusters of Optimal Docking Area points
Using the two-population genetic algorithm with distance-based k-nearest neighbour voting classifier for high-dimensional data
Uncovering the intension of Alisma orientale decoction for treating vertigo: a perspective from network analysis
An advanced approach for DNA sequencing and similarities analysis on the basis of groupings of nucleotide bases
An in silico approach to de novo design of anti-microbial peptide from inspirited Komodo dragon's original VK6 peptide
Cross-modal imputation and gated GCN for predicting miRNA-disease association (CIGGNET)
Protein family structure signature for multidomain proteins
Advances in the computational methods to understand protein folding and stability
Classification of TCGA-related research articles based on cancer types and experimental strategy
An Improved Position Weight Matrix method based on an entropy measure for the recognition of prokaryotic promoters
Predictions of flexible C-terminal tethers of bacterial proteins with the FLEXTAIL bioinformatics pipeline
An integrated multivariate group sparse approach to identify differentially expressed genes of breast cancer data
Ensemble classifier design selecting important genes based on extracted features
Biomedical text summarisation using concept chains
Task scheduling method of production line workflow based on firefly algorithm
An empirical study on construction emergency disaster management and risk assessment in shield tunnel construction project with big data analysis
Analysis of the relationships among Longest Common Subsequences, Shortest Common Supersequences and patterns and its application on pattern discovery in biological sequences
miRNA target recognition using features of suboptimal alignments
A system biology approach for understanding the miRNA regulatory network in colon rectal cancer
Feature selection for genomic data sets through feature clustering
Handling gene redundancy in microarray data using Grey Relational Analysis
Template edge similarity graph clustering for mining multiple gene expression datasets
Application of SNPViz v2.0 using next-generation sequencing data sets in the discovery of potential causative mutations in candidate genes associated with phenotypes
Analysing the associations between infected genes using data mining techniques
A fast Boyer-Moore type pattern matching algorithm for highly similar sequences
HNC: a hybrid neighbourhood-consensus clustering algorithm for single-cell RNA-seq data
Sequence-based protein superfamily classification using computational intelligence techniques: a review
Transcriptomic and network analyses combine to identify genes that drive the red blood cell cycle of Plasmodium falciparum
A multi-objective feature selection and classifier ensemble technique for microarray data analysis
Improved short adjacent repeat identification using three evolutionary Monte Carlo schemes
MicroRNAfold: pre-microRNA secondary structure prediction based on modified NCM model with thermodynamics-based scoring strategy
Hyperlink induced topic search-based method to predict essential proteins
Predicting protein-protein interactions by weighted pseudo amino acid composition
Data mining method for monitoring students' distance learning behaviour based on decision tree
A Bayesian approach for genotyping single nucleotide polymorphisms (SNPs)
Kernel design for RNA classification using Support Vector Machines
Early sepsis recognition based on infrared thermography
Identifying susceptibility networks for drug-induced non-immune neutropenia
TISRover: ConvNets learn biologically relevant features for effective translation initiation site prediction
Message Passing Clustering (MPC): a knowledge-based framework for clustering under biological constraints
Integration of k-means clustering algorithm with network analysis for drug-target interactions network prediction
Gene order computation using Alzheimer's DNA microarray gene expression data and the ant colony optimisation algorithm
Predictive model to determine the growth of mobile money transactions in Zambia using data mining techniques
An end-to-end framework for biomedical event trigger identification with hierarchical attention and adaptive cost learning
A clinical decision support system based on support vector machine and binary particle swarm optimisation for cardiovascular disease diagnosis
A multi-view classification and feature selection method via sparse low-rank regression analysis
A feature-learning-based method for the disease-gene prediction problem
A framework for identifying colorectal cancer genes in detected protein complexes
ECPF: an efficient algorithm for expanding clustered protein families
An effective hybrid approach of gene selection and classification for microarray data based on clustering and particle swarm optimisation
Enhancing drug-drug interaction event prediction from knowledge graphs by multimodal deep neural networks
A Bayesian framework for knowledge driven regression model in micro-array data analysis
Extraction of drug-drug interaction information using a deep neural network
Protein interaction detection in sentences via Gaussian Processes: a preliminary evaluation
Application of consensus string matching in the diagnosis of allelic heterogeneity involving transposition mutation
Identification of master regulator candidates in conjunction with network screening and inference
The effect of SNPs on expression levels in Nimblegen RNA expression microarrays
Improving secretory proteins prediction in Mycobacterium tuberculosis using the unbiased dipeptide composition with support vector machine
A rule-based approach for RNA pseudoknot prediction
Deletion genotype calling on the basis of sequence visualisation and image classification
Chemical-protein interaction extraction from biomedical literature: a hierarchical recurrent convolutional neural network method
Sparse superlayered neural network-based multi-omics cancer subtype classification
Predicting protein functions by using non-negative matrix factorisation with multi-networks co-regularisation
A new data-driven method for microarray data classification
Unsupervised representation learning and anomaly detection in ECG sequences
Pattern discovery of multivariate phenotypes by Association Rule Mining and its scheme for Genome-Wide Association Studies
Evaluation of statistical methods for the analysis of crossover designs with repeated measurements
Modified VGG-16 model for COVID-19 chest X-ray images: optimal binary severity assessment
Clinical text classification under the Open and Closed Topic Assumptions
Temporal representation for gene networks: towards a qualitative temporal data mining
GeneRank-based partly adaptive group-penalised multinomial regression for microarray classification
Matrix factorisation methods applied in microarray data analysis
Multi-level clustering support vector machine trees for improved protein local structure prediction
Predicting transmission of avian influenza A viruses from avian to human by using informative physicochemical properties
A novel protein complex identifying method based on key protein (PCIM)
A semi-supervised, weighted pattern-learning approach for extraction of gene regulation relationships from scientific literature
Exploring the pharmacological mechanism of Artemisia annua herba based on network pharmacology
DNA sequence and structure properties analysis reveals similarities and differences to promoters of stress responsive genes in Arabidopsis thaliana
Spherical-harmonic decomposition for molecular recognition in electron-density maps
Probabilistic partial least squares regression for quantitative analysis of Raman spectra
Simulating the cellular passive transport of glucose using a time-dependent extension of Gillespie algorithm for stochastic pi-calculus
Granular support vector machine to identify unknown structural classes of protein
Automatic quantitative analysis and localisation of protein expression with GDF
An efficient motif discovery algorithm with unknown motif length and number of binding sites
A novel method to measure the semantic similarity of HPO terms
ACC-FMD: ant colony clustering for functional module detection in protein-protein interaction networks
A novel intelligent-based intrusion detection and prevention system in the cloud using deep learning with meta-heuristic strategy
A modified harmony search method for biclustering microarray gene expression data
Log anomaly detection and diagnosis method based on deep learning
Improving robustness of gene ranking by multi-criterion combination with novel gene importance transformation
Analysing SEER cancer data using signed maximal frequent itemset networks
Discovery of phenotypic networks from genotypic association studies with application to obesity
Assessing protein-protein interactions based on the semantic similarity of interacting proteins
Systematic investigation of hyperparameters on performance of deep neural networks: application to ovarian cancer phenotypes
Scoring and summarising gene product clusters using the Gene Ontology
Prediction of Protein Secondary Structure with two-stage multi-class SVMs
Exploiting multi-layered vector spaces for signal peptide detection
Managing changes in distributed biomedical ontologies using hierarchical distributed graph transformation
BoneNET: a network model of bone microstructure and dynamics
Simulation study in Probabilistic Boolean Network models for genetic regulatory networks
PPIPP: an online protein-protein interaction network prediction and analysis platform
A semi-supervised approach to projected clustering with applications to microarray data
Ensemble of deep learning models to predict platinum resistance in high grade serous ovarian cancer
Effective induction of gene regulatory networks using a novel recommendation method
A data mining approach to dinoflagellate clustering according to sterol composition: correlations with evolutionary history
A mobile system for real-time context-aware monitoring of patients' health and fainting
Linear regression-based feature selection for microarray data classification
A new approach for detecting fungal and oomycete plant pathogens in next generation sequencing metagenome data utilising electronic probes
A novel ensemble approach for multicategory classification of DNA microarray data using biological relevant gene sets
WF-MSB: A weighted fuzzy-based biclustering method for gene expression data
CS-ABC: a cooperative system based on artificial bee colony to resolve the DNA fragment assembly problem
An integrative approach for codon repeats evolutionary analyses
MAPLSC: A novel multi-class classifier for medical diagnosis
Comparative studies on multivariate tests for joint-SNVs analysis and detection for bipolar disorder susceptibility genes
Fast practical online exact single and multiple pattern matching algorithms in highly similar sequences
Application of digital twin virtual design and BIM technology in intelligent building image processing
Finding correlated biclusters from microarray data using the modified lift algorithm based on new residue score
Validation of the merged co-variation signal in interacting protein pairs by mirror-dendrogram
Identification of protein hot regions by combining structure-based classification, energy-based clustering and sequence-based conservation in evolution
Prediction of DNA-binding residues from sequence information using convolutional neural network
Dynamic algorithm for inferring qualitative models of Gene Regulatory Networks
Mitigating bias in planning two-colour microarray experiments
Gene Regulatory Network modelling: a state-space approach
bcnQL: A query language for biochemical networks
On a novel coalescent model for genome-wide evolution of Copy Number Variations
Combine multiple mass spectral similarity measures for compound identification
Age invariant face recognition method based on enhanced convolutional neural network
Efficient methods for hierarchical multi-omic feature extraction and visualisation
Metaheuristic gene regulatory networks inference using discrete crow search algorithm and quantitative association rules
Two stages weighted sampling strategy for detecting the relation between gene expression and disease
Translation of disease associated gene signatures across tissues
Negative correlation based gene markers identification in integrative gene expression data
A mixture-of-experts approach for gene regulatory network inference
Multivariate summary approach to omics data from crossover design with two repeated factors
Integrating big data collaboration models: advancements in health security and infectious disease early warning systems
Evaluating the contributions of GO term properties to semantic similarity measurement
The relationship between experimentally validated intracellular human protein stability and the features of its solvent accessible surface
A hybrid of bees algorithm and flux balance analysis (BAFBA) for the optimisation of microbial strains
MU thyroid nodule electronic database (MU-TNED), a multidisciplinary informatics approach to long-term thyroid nodule and thyroid cancer follow-up
Adaptive Fuzzy Association Rule mining for effective decision support in biomedical applications
A clustering approach for estimating parameters of a profile hidden Markov model
User experience evaluation of Google search for obtaining medical knowledge: a case study
Signal transduction in the activation of spermatozoa compared to other signalling pathways: a biological networks study
A pipeline for identifying endogenous neuropeptides from spectral archives
Using Gene Ontology to enhance effectiveness of similarity measures for microarray data
Inference system using softcomputing and mixed data applied in metabolic pathway datamining
Ordering cancer mutational profiles of cross-sectional copy number alterations
Estimating functional coupling between cancer gene sub-networks using novel interaction measures
Study on intelligent syndrome differentiation in Traditional Chinese Medicine based on multiple information fusion methods
PMCR-Miner: parallel maximal confident association rules miner algorithm for microarray data set
Sequence based human leukocyte antigen gene prediction using informative physicochemical properties
Neural relevance model using similarities with elite documents for effective clinical decision support
A hybrid named entity tagger for tagging human proteins/genes
An integrated computational environment for elementary modes analysis of biochemical networks
A general protein-protein interaction extraction architecture based on word representation and feature selection
Applications of Self-Organising Map (SOM) for prioritisation of endemic zones of filariasis in Andhra Pradesh, India
Integrating machine learning techniques into robust data enrichment approach and its application to gene expression data
Evaluating data mining algorithms using molecular dynamics trajectories
Dual network control system for bottom hole throttling pressure control based on RBF with big data computing
Rough-fuzzy segmentation of HEp-2 cell indirect immunofluorescence images
Sparse p-norm Nonnegative Matrix Factorization for clustering gene expression data
Dynamic basis of mRNA processing in male germline stem cell pluripotency and reprogramming by alternative polyadenylation
Extracting epidemiologic exposure and outcome terms from literature using machine learning approaches
Clustering PPI data based on Improved functional-flow model through Quantum-behaved PSO
Microarray data classification by multi-information based gene scoring integrated with Gene Ontology
The development of non-coding RNA ontology
Study on the rule and logical relationship of TCM prescription for lumbago
Information source tracing method of electronic commerce supply chain based on blockchain
A novel approach in discovering significant interactions from TCM patient prescription data
OpenHI: open platform for histopathological image annotation
Design of an intelligent financial sharing platform driven by digital economy and its role in optimising accounting transformation production
Detection of foetal single gene mutations using only maternal blood samples
Meta-learning framework applied in bioinformatics inference system design
Recommending alternative drugs by using generic drug names to minimise side effects
Natural language processing-based machine learning psychological emotion analysis method
Bi-level clustering of mixed categorical and numerical biomedical data
Learning multiple distributed prototypes of semantic categories for named entity recognition
Prediction method of commercial customers' mental health based on data mining
Clustering sequences by overlap
Mining for representative regions of virus genuses via protein sequences clustering
Data-driven forecasting of pharmaceutical sales: distinguishing promotional vs. daily scenarios
A machine learning-based system to normalise gene mentions to unique database identifiers
A new clustering approach for learning transcriptional modules
Combining multiple perspective as intelligent agents into robust approach for biomarker detection in gene expression data
A contextual auditing method for SNOMED CT concepts
Refinement of under-determined loops of Human Prion Protein by database-derived distance constraints
Protein crystallization prediction with AdaBoost
Operon prediction by Markov clustering
Comparing ensemble learning methods based on decision tree classifiers for protein fold recognition
Co-decision matrix framework for name entity recognition in biomedical text
Using genetic algorithm and maximum clique to design multiplex PCR primers for sequential deletion applications
Extracting templates from radiology reports using sequence alignment
Construction of relational word dictionary and learning of relational rules in PPI extraction from biomedical literatures
Protein structural classification using orthogonal transformation and class-association rules
Effects of input data quantity on genome-wide association studies (GWAS)
Cross-border e-commerce logistics distribution optimisation based on IoT artificial intelligence algorithm
A comparative review of recent bioinformatics tools for inferring gene regulatory networks using time-series expression data
Learning Bayesian networks with integration of indirect prior knowledge
MentalSquares: A generic bipolar Support Vector Machine for psychiatric disorder classification, diagnostic analysis and neurobiological data mining
Grey anti-inflammation analysis of phenolic acid phenethyl esters in human neutrophils
Prediction of inter-residue contact clusters from hydrophobic cores
An integrated approach to identify protein complex based on best neighbour and modularity increment
CORE: core-based synthetic minority over-sampling and borderline majority under-sampling technique
CarGene: Characterisation of sets of genes based on metabolic pathways analysis
Modified evolutionary model with insertion and deletion (Indel) for phylogenetic tree construction
An analysis pipeline for the inference of protein-protein interaction networks
Non-linear optimisation with constraints for four-parameter logistic model used in cell-based in-vitro assay
A heuristic for gene selection and visual prediction of sample type
A protein-protein interaction extraction approach based on deep neural network
Adaptive lasso penalised censored composite quantile regression
Improving domain-based protein interaction prediction using biologically-significant negative dataset
Development of 3D-QSAR combination approach for discovering and analysing neuraminidase inhibitors in silico
Saccharomyces cerevisiae genotype phenotype mapping through leptokurtic PLS loading weights
Struct-NB: predicting protein-RNA binding sites using structural features
Simplified stochastic models with time delay for studying the degradation process of mRNA molecules
The role of SP100 in tumour immune microenvironment and prognosis of head and neck squamous cell carcinoma
Irrelevant gene elimination for Partial Least Squares based Dimension Reduction by using feature probes
Biomedical named entity recognition based on recurrent neural networks with different extended methods
Unbalanced sample size effect on genome-wide population differentiation studies
Graph embedding and ensemble learning for predicting gene-disease associations
Mining literatures to discover novel multiple biological associations in a disease context
Re-ranking with context for high-performance biomedical information retrieval
Structural variation calling and genotyping by moment-based deep convolutional neural networks
Annealing-based model-free expectation maximisation for multi-colour flow cytometry data clustering
An efficient visualisation method for exploring latent patterns in large microbiome expression data sets
Hybrid softcomputing model for lesion identification and information combination: some case studies
Improving named entity recognition accuracy for gene and protein in biomedical text literature
Mechanism of action of the Wuzi Yanzong prescription to treat asthenozoospermia based on network pharmacology and molecular docking
Predicting alternatively spliced exons using semi-supervised learning
Foetal weight prediction based on improved PSO-GRNN model