yusuke1997/dblp-id-title huggingface dataset:
Predicting Tumor Mutational Burden and Survival in Head and Neck Squamous Cancer Patients Using Machine Learning and Bioinformatics Approaches
CORE: Comparable, Open, Reliable, Extensible Software: An Experience Report of Four Flux Balance Analysis Tools
Mobility Patterns of Doctors Using Electronic Health Records on iPads
Learning to compute the plane of symmetry for human faces
Nucleotide String Indexing using Range Matching
CrossPlan: Systematic Planning of Genetic Crosses to Validate Mathematical Models
MeSH Indexing Using the Biomedical Citation Network
Bioinformatics - transition from algorithmic to data intensive science
Greedy and speedy: optimal vaccination strategies in multi-region heterogeneous networks
National Cancer Institute Cloud Resources
Automate the Peripheral Arterial Disease Prediction in Lower Extremity Arterial Doppler Study using Machine Learning and Neural Networks
Protein evolution is structure dependent and non-homogeneous across the tree of life
Infer Cause of Death for Population Health Using Convolutional Neural Network
Re-balancing Variational Autoencoder Loss for Molecule Sequence Generation
A novel context-sensitive random walk model for estimating node correspondence between two biological networks
Formatt: correcting protein multiple structural alignments by sequence peeking
Assessing the Impact of Uncertain Gene Tree Rooting on Phylogenetic Reconciliation Using a Simulation Framework
Using a Novel Negative Selection Inspired Anomaly Detection Algorithm to Identify Corrupted Ribo-seq and RNA-seq Samples
Dose and time relationship through probabilistic graphical models of gene expression time course toxicogenomics data
Improving personalized clinical risk prediction based on causality-based association rules
Application of Comparative Biosequence Analysis to Understand Antibiotic Resistance in Superbug
DynPred: A Multimodal Deep Learning Approach for Protein Dynamics Prediction
Exploring Pair-Aware Triangular Attention for Biomedical Relation Extraction
CNVnet: combining sparse learning and biological networks to capture joint effect of copy number variants
Employing Deep Learning to Study Biomolecules
ICDFGF: Identification of potential circRNA-disease associations based on feature graph factorization
A Semi-Supervised Learning Approach to Integrated Salient Risk Features for Bone Diseases
EpiCaster: an integrated web application for situation assessment and forecasting of global epidemics
Erlang-delayed stochastic chemical kinetic formalism for efficient analysis of biological systems with non-elementary reaction effects
A novel three-step transcriptomic framework for cancer prediction
Fine-Scale Recombination Mapping of High-Throughput Sequence Data
Text mining tools for assisting literature curation
A Gene-disease-based Machine Learning Approach to Identify Prostate Cancer Biomarkers
Detection of Differential Abundance Intervals in Longitudinal Metagenomic Data Using Negative Binomial Smoothing Spline ANOVA
Predicting G-quadruplexes from DNA Sequences Using Multi-Kernel Convolutional Neural Networks
Robustness measure for an adeno-associated viral shell self-assembly is accurately predicted by configuration space atlasing using EASAL
Neopepsee: Accurate Genome-level Prediction of Neoantigens by Harnessing Sequence and Amino Acid Immunogenicity Information
Towards the assessment of GRN algorithms based on (disease) ontology
Network-based Interpretation of Diverse High-Throughput Datasets through the Omics Integrator Software Package
A Sparse Convolutional Predictor with Denoising Autoencoders for Phenotype Prediction
In silico analysis of autoimmune diseases and genetic relationships to vaccination against infectious diseases
Computational tool for large-scale GPIomic analysis
Integrative Feature Ranking by Applying Deep Learning on Multi Source Genomic Data
A multiscale hybrid evolutionary algorithm to obtain sample-based representations of multi-basin protein energy landscapes
Changes in gene expression near evolutionary breakpoints
SAME: a sampling-based multi-locus epistasis algorithm for quantitative genetic trait prediction
Relational operators for prioritizing candidate biomarkers in high-throughput differential expression data
Automatic selection of near-native protein-ligand conformations using a hierarchical clustering and volunteer computing
Joint inference for end-to-end coreference resolution for clinical notes
Improving LIWC Using Soft Word Matching
Inferring novel associations between SNP sets and gene sets in eQTL study using sparse graphical model
Antidote Application: An Educational System for Treatment of Common Toxin Overdose
Extension of Animal QTLdb: QTL meta-analysis on the fly
ENIGMA-Viewer: Interactive Visualization Strategies for Conveying Effect Sizes in Meta-Analysis
3D Genome Structure Modeling by Lorentzian Objective Function
Functional site prediction by exploiting correlations between labels of interacting residues
Global Surveillance of COVID-19 by mining news media using a multi-source dynamic embedded topic model
PriSeT: efficient de novo primer discovery
A Containerization Framework for Bioinformatics Software to Advance Scalability, Portability, and Maintainability
High-performance data structures for de novo assembly of genomes: cache oblivious generic programming
AutoML in Drug Discovery: Side-Effects Prediction Using AutoGluon Framework and Its Applications in Drug Discovery
Predicting the Effect of Point Mutations on Protein Structural Stability
Leveraging Mutual Information for Functional Annotation Analysis of Microglia in Alzheimer's Disease
Win percentage: a novel measure for assessing the suitability of machine classifiers for biological problems
Using Large Language Models to Translate Machine Results to Human Results
A computationally efficient solution strategy for optimal gene knockouts for targeted overproduction
MoDNA: motif-oriented pre-training for DNA language model
Identifying molecular complexes in biological networks through context sensitive network querying
Effects of cDNA microarray time-series data size on gene regulatory network inference accuracy
LINgroups as a principled approach to compare and integrate multiple bacterial taxonomies
Circadian Rhythms in Neurospora Exhibit Biologically Relevant Driven and Damped Harmonic Oscillations
Simulating Variance Heterogeneity in Quantitative Genome Wide Association Studies
Knowledge-guided differential dependency network learning for detecting structural changes in biological networks
Approximate subspace pattern mining for mapping copy-number variations
A Protein-Protein Interactome for an African Cichlid
Genome-wide compatible SNP intervals and their properties
Discovering geometric patterns in genomic data
Genome scale inference of transcriptional regulatory networks using mutual information on complex interactions
Smart Refrigerator for Healthcare Using Food Image Classification
Designing Helicobacter pylori as an Anticancer Bacterial Vector
Synergistic Fusion of Graph and Transformer Features for Enhanced Molecular Property Prediction
The CMH Warehouse: A Catalog of Genetic Variation in Patients of a Children's Hospital
Homology prediction refinement and reconstruction of gene content and order of ancestral bacterial genomes
Network-based classification of recurrent endometrial cancers using high-throughput DNA methylation data
Modeling Phytoplankton Movement and Fitness in Lakes
Transforming Genomes Using MOD Files with Applications
On enumerating the DNA sequences
A novel approach for mining representative spatial motifs of proteins
A novel cancer classifier based on differentially expressed gene network
Deciphering the contribution of 3D interactions between cis-regulatory elements and promoters to regulate gene expression using graph neural networks
Using Fourier phase analysis on genomic sequences to identify retroviruses
CONSEQUENCES: CONstrained SEQUENCE alignmentS With Multiple User Weights
Multiple Sclerosis Biomarker Discovery via Bayesian Feature Selection
Identification of Co-evolving Temporal Networks
ngsShoRT: A Software for Pre-processing Illumina Short Read Sequences for De Novo Genome Assembly
Analyzing the eICU Collaborative Research Database
Efficient Synthesis of Mutants Using Genetic Crosses
Simulation and study of large-scale bacteria-materials interactions via BioScape enabled by GPUs
How do amino acid mismatches affect the outcome of hematopoietic cell transplants?: a structural perspective
Neighborhood embedding and re-ranking of disease genes with ADAGIO
Introduction to the workshop on computational health science
A Novel Temporal Similarity Measure for Patients Based on Irregularly Measured Data in Electronic Health Records
A Workshop on Microbiomics, Metagenomics, and Metabolomics
Identifying Genes to Predict Cancer Radiotherapy-Related Fatigue with Machine-Learning Methods
Instrumenting the Health Care Enterprise for Discovery in the Course of Clinical Care
Learning Structured Sparsity for Efficient Nanopore DNA Basecalling Using Delayed Masking
Combining ambiguous chemical shift mapping with structure-based backbone and NOE assignment from 15 N-NOESY
Systematic data integration platform for functional glycomics
A next generation sequence processing and analysis platform with integrated cloud-storage and high performance computing resources
Heterogeneous Treatment Effects of Spinal Fusion Surgery for Adolescent Idiopathic Scoliosis Patients
CausalTriad: Toward Pseudo Causal Relation Discovery and Hypotheses Generation from Medical Text Data
Accelerating HMMER on GPUs by implementing hybrid data and task parallelism
Investigation of Drug Repurposing Opportunities Using Side-effects data, Topic Modelling and Clustering Algorithms
Evaluation of Label Dependency for the Prediction of HLA Genes
SAU-Net: A Universal Deep Network for Cell Counting
Protein Tertiary Structure Modeling Driven by Deep Learning and Contact Distance Prediction in CASP13
Phenotyping Intensive Care Unit Patients Using Temporal Abstractions and Temporal Pattern Matching
How Effective is Contact-assisted Protein Threading?
The impact of gene sequence alignment and gene tree estimation error on summary-based species network estimation
Parallel verlet neighbor list algorithm for GPU-optimized MD simulations
DeepCCI: End-to-end Deep Learning for Chemical-Chemical Interaction Prediction
An Integer Linear Programming Solution for the Most Parsimonious Reconciliation Problem under the Duplication-Loss-Coalescence Model
Automated Capture of Naturalistic Child Vocalizations for Health Research
Coupling between heparan sulfate proteoglycans and FGF-2 receptors is key to FGF-2 capture under flow: a computational study
Apoptosis centric Bayesian network perturbation analysis of signaling pathways in colorectal cancer for synergistic drug targets discovery
A multi-agent system with reinforcement learning agents for biomedical text mining
Classification of multicolor fluorescence in-situ hybridization (M-FISH) image using regularized multinomial logistic regression
On Inferring Additive and Replacing Horizontal Gene Transfers Through Phylogenetic Reconciliation
HPC-BLAST: distributed BLAST for xeon phi clusters
Prediction of Clinical Outcomes of Spinal Muscular Atrophy Using Motion Tracking Data and Elastic Net Regression
GCLNSTDA: Predicting tsRNA-Disease Association Based on Contrastive Learning and Negative Sampling
Understand Compound Mechanism of Action at a System Biology Scale through Chemical Biology Data Management and Analysis
Temperature Effects on Neuronal Synchronization
DeepSF: Deep Convolutional Neural Network for Mapping Protein Sequences to Folds
Biomedical Mention Disambiguation using a Deep Learning Approach
The epitope landscape of CRC liver metastases analyzed by whole-exome sequencing and in silico epitope prediction
Computational identification of key functional genes associated with fusarium verticillioides pathogenicity
EXAM: An Explainable Attention-based Model for COVID-19 Automatic Diagnosis
TLSurv: Integrating Multi-Omics Data by Multi-Stage Transfer Learning for Cancer Survival Prediction
A hyper-graph approach for analyzing transcriptional networks in breast cancer
Multi-view prediction of protein function
Predicting protein contact maps by bagging decision trees
PhysioMed: A Semantic Web based Framework for Linking Healthcare Information with Computational Physiology Models
Evolutionary analysis of functional modules in dynamic PPI networks
Choice Over Effort: Mapping and Diagnosing Augmented Whole Slide Image Datasets with Training Dynamics
Hybrid Spectral/Subspace Clustering of Molecular Dynamics Simulations
Bayesian Modeling of Plant Drought Resistance Pathway
A Machine Learning Approach for Uncovering N6-methyladenosine-Disease Association
Ranking Methods of Candidates for p53 Inhibitors Considering Cytotoxicity Using Machine Learning
Multiscale Approximation with Graphical Processing Units for Multiplicative Speedup in Molecular Dynamics
Phylogenetic Placement of Aligned Genomes and Metagenomes with Non-tree-like Evolutionary Histories
A Study of Temporal Action Sequencing During Consumption of a Meal
A Decomposition-based Approach towards the Control of Boolean Networks
Ranking Protein-Protein Binding Using Evolutionary Information and Machine Learning
Data mining to aid beam angle selection for intensity-modulated radiation therapy
Immunoinformatic discovery of potential cross-reactive T cell epitopes in the measles genome
ACM International Conference on Bioinformatics, Computational Biology and Biomedicine, BCB' 12, Orlando, FL, USA - October 08 - 10, 2012
Highlights Talks at ACM BCB 2018
Next generation sequencing data analysis
Unsupervised Multi-View Feature Selection for Tumor Subtype Identification
Rheumatoid Arthritis molecular heterogeneity
Graph-theoretic analysis of epileptic seizures on scalp EEG recordings
Predictive and Comparative Network Analysis of the Gut Microbiota in Type 2 Diabetes
SpliceGrapherXT: From Splice Graphs to Transcripts Using RNA-Seq
Text Mining of Protein Phosphorylation Information Using a Generalizable Rule-Based Approach
A Manifold Learning Based Approach to Reveal the Functional Linkages across Multiple Gene Networks
Generalized Matching Distance: Tumor Phylogeny Comparison Beyond the Infinite Sites Assumption
Deep Recurrent Conditional Random Field Network for Protein Secondary Prediction
Fast and efficient compression of high-throughput sequencing reads
Interpretable Predictions of Clinical Outcomes with An Attention-based Recurrent Neural Network
Statistical and Network Analysis of Metabolomics Data
A structured approach to ensemble learning for Alzheimer's disease prediction
DeCoDe: degenerate codon design for complete protein-coding DNA libraries
Scalable Genomic Assembly through Parallel de Bruijn Graph Construction for Multiple K-mers
Detecting privacy-sensitive events in medical text
The Art of Connectivity Mapping
A scalable approach for inferring transcriptional regulation in the yeast cell cycle
Analysis of Sequencing Data: Tutorial Overview Abstract
A method for analyzing health behavior in online forums
Read Annotation Pipeline for High-Throughput Sequencing Data
Prioritization of genomic locus pairs for testing epistasis
Temporal Relation Identification and Classification in Clinical Notes
Robust Retinal Layer Segmentation Using OCT B-Scans: A Novel Approach Based on Pix2Pix Generative Adversarial Network
RBFNN-based Modelling and Analysis for the Signal Reconstruction of Peripheral Nerve Tissue
A Tool for Predicting the Dark Side of Enzymes
HYPON: embedding biomedical ontology with entity sets
The Classification of Multiple Power Quality Disturbances Based on Dynamic Event Tree and Support Vector Machine
Solar PV Power Forecasting Approach Based on Hybrid Deep Neural Network
Features Extraction and Classification of EEG Signals Using Empirical Mode Decomposition and Support Vector Machine
SampleBoost for Capsule Endoscopy Categorization and Abnormality Detection
A Deep Learning Solution Framework for Awareness, Diagnosing and Predicting COVID-19
Harnessing the Power of Big Data in Science
Combining BRIEF and AD for Edge-Preserved Dense Stereo Matching
Sparse ICA Based on Infinite Norm for fMRI Analysis
Smart and Incremental Model to Build Clustered Trending Topics of Web Documents
Parallel Computation for Sparse Network Component Analysis
Computer Aided Diagnostic System for Automatic Detection of Brain Tumor Through MRI Using Clustering Based Segmentation Technique and SVM Classifier
Novel Binary Search Algorithm for Fast Tag Detection in Robust and Secure RFID Systems
Satellite Super Resolution Image Reconstruction Based on Parallel Support Vector Regression
Density Based Fuzzy Thresholding for Image Segmentation
The Regression of MNIST Dataset Based on Convolutional Neural Network
Overview of Network Security Situation Awareness Based on Big Data
Arabic Text Generation: Deep Learning for Poetry Synthesis
Melanoma Classification Based on Ensemble Classification of Dermoscopy Image Features
A Hybrid Grey Wolf-Bat Algorithm for Global Optimization
Optimal Operation of Reservoir Power Generation Based on Improved Grey Wolf Algorithm
A Framework for Ovarian Cancer Diagnosis Based on Amino Acids Using Fuzzy-Rough Sets with SVM
Highly Secured Multilayered Motion Vector Watermarking
Dental Age Estimation: A Machine Learning Perspective
CBARS: Cluster Based Classification for Activity Recognition Systems
Performance Evaluation of Research Reactors Under Different Predictive Controllers
Arabic Sign Language Recognition Using Spatio-Temporal Local Binary Patterns and Support Vector Machine
Regression Task on Big Data with Convolutional Neural Network
Feedback Vocal Rehabilitation Software Applied to Mobile Devices for Maximum Phonation Time
Towards Smart Egypt - The Role of Large Scale WSNs
Adaptive Higher Order Sliding Mode Control for Robotic Manipulators with Matched and Mismatched Uncertainties
Improving the Deaf and Hard of Hearing Internet Accessibility: JSL, Text-into-Sign Language Translator for Arabic
An Enhanced Object Tracking Algorithm Based on Augmented Reality Markup Language (ARML) for Medical Engineering
Semantic Graph Representation and Evaluation for Generated Image Annotations
A Novel Hybrid Perceptron Neural Network Algorithm for Classifying Breast MRI Tumors
A Generalized Polygon Fuzzy Number for Fuzzy Multi Criteria Decision Making
Interactive Fuzzy Cellular Automata for Fast Person Re-Identification
Parallel Ward Clustering for Chemical Compounds Using MapReduce
Text Classification of Arabic Text: Deep Learning in ANLP
Resource-Constrained Project Scheduling of Cloud Platform Based on Column Generation Algorithm
Student Profile in E-learning Environment Based on Two-Dimensional Ontologies
Advanced Machine Learning Technologies and Applications - Proceedings of AMLTA 2021, Cairo, Egypt, March 22-24, 2021
Impact of COVID-19 Pandemic on Diet Prediction and Patient Health Based on Support Vector Machine
FPGA Design and Implementation of a Self-Visual Acuity Test System
Investigation of Touch-Based User Authentication Features Using Android Smartphone
A Distributed Artificial Intelligence Framework to Evolve Infrastructure Resilience in Telecommunications Sector
MRI Brain Tumor Segmentation System Based on Hybrid Clustering Techniques
Job Candidate Rank Approach Using Machine Learning Techniques
Security Analysis of a Multi-server-Based e-Healthcare Scheme
The Design of Power Quality Detecting System Based on ADSP-BF606
Performance Evaluation of SVM-Based Amazighe Named Entity Recognition
A Blind Fragile Based Medical Image Authentication Using Schur Decomposition
Spoken Arabic Digits Recognition System Using Convolutional Neural Network
Using Related Text Sources to Improve Classification of Transcribed Speech Data
Initial Study of the Content Authentication on Digital Preservation of Cultural Institutions
Improved Production Key Performance Indicators (KPI's) Using Intelligent-Manufacturing Execution Systems (I-MES)
Trained Neural Networks Ensembles Weight Connections Analysis
An Enhanced Resource Allocation Approach for Optimizing Sub Query on Cloud
Exploring Different Approaches for Parsing Telugu
Towards a Characterization of Musical Timbre Based on Chroma Contours
Design of Turbo Codes for CubeSats
A Reinforcement Learning-Based Adaptive Learning System
Non-invasive Calibration-Free Blood Pressure Estimation Based on Artificial Neural Network
An Empirical Evaluation of the Credibility, Trust Perceptions, and Compatibility with Cloud-Based Services: The Case of Higher Education in Malaysia
Bayesian Classification of Personal Histories - An application to the Obesity Epidemic
A Comparative Study of Localization Algorithms in WSNs
Swarming Behaviors of Chicken for Predicting Posts on Facebook Branding Pages
Image Encryption Algorithm Methodology Based on Multi-mapping Image Pixel
Synchronization between a Novel Integer-Order Hyperchaotic System and a Fractional-Order Hyperchaotic System Using Tracking Control
iSee: An Android Application for the Assistance of the Visually Impaired
Test Cases Automatic Generator (TCAG): A Prototype
Adaptive Task Scheduling on Multicore Processors
Solving Avatar Captchas Automatically
Cloud Model - A Bidirectional Cognition Model between Concept's Extension and Intension
Open Circuit Fault Diagnosis of Cascaded H-Bridge MLI Using k-NN Classifier Based on PPCA
Mining Student Information System Records to Predict Students' Academic Performance
Influence Ranking Model for Social Networks Users
A Semantic Text Summarization Model for Arabic Topic-Oriented
IOT-Based Conceptual Framework for the Prevention of Acute Air Pollution Episodes for Reducing and Limiting Related Diseases in Egypt
A Multi-objective Pigeon-Inspired Optimization Algorithm Based on Decomposition
Decision Support System for Determination of Forces Applied in Orthodontic Based on Fuzzy Logic
Agricultural Service Mobile Robot Modeling and Control Using Artificial Fuzzy Logic and Machine Vision
Development of Malaysian Digital Forensics Investigator Competency Identification Methods
Predictive Control of Superheated Steam Temperature of Molten Salt Heat Storage System
Low-Cost Based on Smart Trash Can Bag Changing System
Deep Layer CNN Architecture for Breast Cancer Histopathology Image Detection
Improving Land-Cover and Crop-Types Classification of Sentinel-2 Satellite Images
Machine Learning: A Convergence of Emerging Technologies in Computing
City Crime Mapping Using Machine Learning Techniques
Performance Enhancement of Distributed Clustering for Big Data Analytics
Restraining Strategy of Photovoltaic Power Fluctuation Based on Hybrid Energy Storage System
Pairwise Global Sequence Alignment Using Sine-Cosine Optimization Algorithm
Automatic Color Image Segmentation Based on Illumination Invariant and Superpixelization
Arabic Sign Language Recognition System Based on Adaptive Pulse-Coupled Neural Network
Path Planning Control for 3-Omni Fighting Robot Using PID and Fuzzy Logic Controller
Optimal Shortest Path in Mobile Ad-Hoc Network Based on Fruit Fly Optimization Algorithm
User Awareness of Privacy, Reporting System and Cyberbullying on Facebook
Automatic Fruit Image Recognition System Based on Shape and Color Features
Towards Improvements on Multi-tenant RDBMS Migration in the Cloud Environment
Hybrid Information Filtering Engine for Personalized Job Recommender System
Detecting Epileptic Seizures Using Abe Entropy, Line Length and SVM Classifier
Support Vector Machines with Weighted Powered Kernels for Data Classification
Named Entity Based Document Similarity with SVM-Based Re-ranking for Entity Linking
Reduction of Variations Using Chemometric Model Transfer: A Case Study Using FT-NIR Miniaturized Sensors
Threshold Image Segmentation for Non-uniform Illumination Using Otsu Optimization Approach
A Genetic-CBR Approach for Cross-Document Relationship Identification
Protective Frameworks and Schemes to Detect and Prevent High Rate DoS/DDoS and Flash Crowd Attacks: A Comprehensive Review
A Novel Genetic Algorithm Based k-means Algorithm for Cluster Analysis
Deep Learning for Predictive Analytics in Healthcare
Text Mining Approach to Extract Associations Between Obesity and Arabic Herbal Plants