yusuke1997/dblp-id-title huggingface dataset:
Improving the Fusion of Outbreak Detection Methods with Supervised Learning
A Quantitative and Qualitative Characterization of k-mer Based Alignment-Free Phylogeny Construction
Weighting Scheme Methods for Enhanced Genomic Annotation Prediction
Supervised Term Weights for Biomedical Text Classification: Improvements in Nearest Centroid Computation
Multiple Sclerosis Disease: A Computational Approach for Investigating Its Drug Interactions
Functional Data Analysis and Clustering of Haematological Parameters in SARS-CoV-2 Patients
Computational Intelligence Methods for Bioinformatics and Biostatistics - 15th International Meeting, CIBB 2018, Caparica, Portugal, September 6-8, 2018, Revised Selected Papers
Synergy Between Mechanistic Modelling and Ensemble Feature Selection Approaches to Explore Multiscale Biological Heterogeneity
Three-Stage Data Science Methodology to Explore Genetic Heterogeneity of Diseases
Random Matrix Theory and Covariance Matrix Filtering for Cancer Gene Expression
Molecular Docking for Drug Discovery: Machine-Learning Approaches for Native Pose Prediction of Protein-Ligand Complexes
Unravelling Breast and Prostate Common Gene Signatures by Bayesian Network Learning
NuchaRt: Embedding High-Level Parallel Computing in R for Augmented Hi-C Data Analysis
FP-Elegans M1: Feature Pyramid Reservoir Connectome Transformers and Multi-backbone Feature Extractors for MEDMNIST2D-V2
A Novel Approach Based on Joint Optimization of Alignment and Statistical Surface Representation with Wavelet Transform for CBCT Segmentation
A Multi-relational Learning Framework to Support Biomedical Applications
Computational Intelligence Methods for Bioinformatics and Biostatistics, 8th International Meeting, CIBB 2011, Gargnano del Garda, Italy, June 30 - July 2, 2011, Revised Selected Papers
De Novo Protein Subcellular Localization Prediction by N-to-1 Neural Networks
Managing NGS Differential Expression Uncertainty with Fuzzy Sets
cyTRON and cyTRON/JS: Two Cytoscape-Based Applications for the Inference of Cancer Evolution Models
On the Simulation and Automatic Parametrization of Metabolic Networks Through Electronic Design Automation
Alignment Free Dissimilarities for Nucleosome Classification
Qualitative Reasoning on Systematic Gene Perturbation Experiments
Sem Best Shortest Paths for the Characterization of Differentially Expressed Genes
Computational Intelligence Methods for Bioinformatics and Biostatistics - 16th International Meeting, CIBB 2019, Bergamo, Italy, September 4-6, 2019, Revised Selected Papers
Computational Intelligence Methods for Bioinformatics and Biostatistics - 11th International Meeting, CIBB 2014, Cambridge, UK, June 26-28, 2014, Revised Selected Papers
Pre-trained Models Based on Primary Sequence to Classify Antibody Binding to Protein and Non-protein Targets with 80% Accuracy
A Faster Algorithm for Motif Finding in Sequences from ChIP-Seq Data
Exploring the Relatedness of Gene Sets
Living Along COVID-19: Assessing Contention Policies Through Agent-Based Models
Topology Preserving Neural Networks for Peptide Design in Drug Discovery
An Information Theoretic Approach to Reverse Engineering of Regulatory Gene Networks from Time-Course Data
Intelligent Text Processing Techniques for Textual-Profile Gene Characterization
A Machine Learning Pipeline for Discriminant Pathways Identification
Hierarchical Block Matrix Approach for Multi-view Clustering
Genomic Annotation Prediction Based on Integrated Information
Dynamic Gaussian Graphical Models for Modelling Genomic Networks
Non-parametric MANOVA Methods for Detecting Differentially Expressed Genes in Real-Time RT-PCR Experiments
Designing and Evaluating Deep Learning Models for Cancer Detection on Gene Expression Data
Tumor Subclonal Progression Model for Cancer Hallmark Acquisition
The General Regression Neural Network to Classify Barcode and mini-barcode DNA
Integration of Single-Cell RNA-Sequencing Data into Flux Balance Cellular Automata
Can Smoothing Methods Recognize the Patterns of the Hazard Function in Complex Clinical Scenarios? - A Simulation Study Using Discrete-Time Survival Models
Penalized Principal Component Analysis of Microarray Data
Cutting Slices of Complexity in Cancer Therapy Design: An Agent-Based Model of Dabrafenib in Melanoma
Summarizing Global SARS-CoV-2 Geographical Spread by Phylogenetic Multitype Branching Models
Solving Biclustering with a GRASP-Like Metaheuristic: Two Case-Studies on Gene Expression Analysis
Supervised Classification Methods for Mining Cell Differences as Depicted by Raman Spectroscopy
A Framework for Mining Life Sciences Data on the Semantic Web in an Interactive, Graph-Based Environment
A Proposed Knowledge Based Approach for Solving Proteomics Issues
RF-Isolation: A Novel Representation of Structural Connectivity Networks for Multiple Sclerosis Classification
Screening the Bioactivity of the P450 Enzyme by Spiking Neural Networks
Superresolution MUSIC Based on Marčenko-Pastur Limit Distribution Reduces Uncertainty and Improves DNA Gene Expression-Based Microarray Classification
Projection Based Clustering of Gene Expression Data
Analysis of Extremely Obese Individuals Using Deep Learning Stacked Autoencoders and Genome-Wide Genetic Data
Ensemble Approaches for Stable Assessment of Clusters in Microbiome Samples
BioCloud Search EnGene: Surfing Biological Data on the Cloud
Discovering Hidden Pathways in Bioinformatics
GAN-Based Multiple Adjacent Brain MRI Slice Reconstruction for Unsupervised Alzheimer's Disease Diagnosis
Case/Control Prediction from Illumina Methylation Microarray's β and Two-Color Channels in the Presence of Batch Effects
Cross Sequencing Integration of Compositional Microbiome Data in Cancer
Sentence Classification to Detect Tables for Helping Extraction of Regulatory Interactions in Bacteria
Transformers for Interpretable Classification of Histopathological Images
Intelligent Clinical Decision Support Systems for Non-invasive Bladder Cancer Diagnosis
Homophily of Large Weighted Networks in a Data Streaming Setting
A New Feature Selection Methodology for K-mers Representation of DNA Sequences
A Smartphone-Based Clinical Decision Support System for Tremor Assessment
Multiple Sequence Alignment with Genetic Algorithms
Gene Set-Focused Analysis of RNA-Seq Data with MIEP (Make-It-Easy-Pipeline)
Fast and Parallel Algorithm for Population-Based Segmentation of Copy-Number Profiles
An Extension of the TIGR M4 Suite to Preprocess and Visualize Affymetrix Binary Files
Validation Pipeline for Computational Prediction of Genomics Annotations
Transfer Learning and Magnetic Resonance Imaging Techniques for the Deep Neural Network-Based Diagnosis of Early Cognitive Decline and Dementia
NuChart-II: A Graph-Based Approach for Analysis and Interpretation of Hi-C Data
Effect of Epigallocatechin-3-gallate on DMPC Oxidation Revealed by Infrared Spectroscopy
On the Use of Temporal Formal Logic to Model Gene Regulatory Networks
Clusters Identification in Binary Genomic Data: The Alternative Offered by Scan Statistics Approach
Coarse-Grained Modeling of the HIV-1 Protease Binding Mechanisms: I. Targeting Structural Flexibility of the Protease Flaps and Implications for Drug Design
TARNAS, a TrAnslator for RNA Secondary Structure Formats
Chemical Neural Networks and Synthetic Cell Biotechnology: Preludes to Chemical AI
The ImmunoGrid Simulator: How to Use It
Computational Intelligence Methods for Bioinformatics and Biostatistics, 6th International Meeting, CIBB 2009, Genoa, Italy, October 15-17, 2009, Revised Selected Papers
Multiple Clustering Solutions Analysis through Least-Squares Consensus Algorithms
Centrality Speeds the Subgraph Isomorphism Search Up in Target Aware Contexts
Network Propagation-Based Semi-supervised Identification of Genes Associated with Autism Spectrum Disorder
Comparison of Gene Expression Signature Using Rank Based Statistical Inference
A Novel Technique for Reduction of False Positives in Predicted Gene Regulatory Networks
Hierarchical Clustering with an Ensemble of Principle Component Trees for Interpretable Patient Stratification
Cancer Mutational Signatures Identification with Sparse Dictionary Learning
Searching Structural Blocks by SS Exhaustive Matching
Investigating Distance Metrics in Semi-supervised Fuzzy c-Means for Breast Cancer Classification
A New Linear Initialization in SOM for Biomolecular Data
Searching for the Source of Difference: A Graphical Model Approach
Statistical Analysis of Protein Structural Features: Relationships and PCA Grouping
Advantages and Limits in the Adoption of Reproducible Research and R-Tools for the Analysis of Omic Data
Novel Approaches for Spatially Resolving Gene Responses and Injection Site Localization in Transcriptomic Data
In Silico Evaluation of Daclizumab and Vitamin D Effects in Multiple Sclerosis Using Agent Based Models
Stability and Performances in Biclustering Algorithms
Classification of Epileptic Activity Through Temporal and Spatial Characterization of Intracranial Recordings
The Challenges of Interpreting Phosphoproteomics Data: A Critical View Through the Bioinformatics Lens
The Impact of Mis-Labeled Artefacts on Deep Learning Models for EEG Analysis: a Case Study
Detection of Triclosan Dioxins After UV Irradiation - A Preliminar Study
Automated Detection of Fluorescent Probes in Molecular Imaging
Approximate Abelian Periods to Find Motifs in Biological Sequences
Stochastic Modeling and Dosage Optimization of a Cancer Vaccine Exploiting the EpiMod Framework
Committee-Based Active Learning to Select Negative Examples for Predicting Protein Functions
Private, Efficient and Scalable Kernel Learning for Medical Image Analysis
Computational Intelligence Methods for Bioinformatics and Biostatistics, 5th International Meeting, CIBB 2008, Vietri sul Mare, Italy, October 3-4, 2008, Revised Selected Papers
Host Phenotype Prediction from Differentially Abundant Microbes Using RoDEO
Predicting the Oncogenic Potential of Gene Fusions Using Convolutional Neural Networks
A Fine-Grained CUDA Implementation of the Multi-objective Evolutionary Approach NSGA-II: Potential Impact for Computational and Systems Biology Applications
Machine Learning Classifiers Based on Dimensionality Reduction Techniques for the Early Diagnosis of Alzheimer's Disease Using Magnetic Resonance Imaging and Positron Emission Tomography Brain Data
Random Sample Consensus for the Robust Identification of Outliers in Cancer Data
GP-Based Grammatical Inference for Classification of Amyloidogenic Sequences
Parameter Inference in Differential Equation Models of Biopathways Using Time Warped Gradient Matching
Computational Intelligence Methods for Bioinformatics and Biostatistics - 14th International Meeting, CIBB 2017, Cagliari, Italy, September 7-9, 2017, Revised Selected Papers
Detecting Overlapping Protein Communities in Disease Networks
A Commentary on a Censored Regression Estimator
Gene Set Optimization for Single Cell Transcriptomics
A Non-Negative Matrix Tri-Factorization Based Method for Predicting Antitumor Drug Sensitivity
Process Algebra with Layers: Multi-scale Integration Modelling Applied to Cancer Therapy
Extension of the GreatMod Modeling Framework to Simulate Non-Markovian Processes with General-Distributed Events
Computing Discrete Fine-Grained Representations of Protein Surfaces
Identification of Pathway Signatures in Parkinson's Disease with Gene Ontology and Sparse Regularization
Feature Selection for the Prediction and Visualization of Brain Tumor Types Using Proton Magnetic Resonance Spectroscopy Data
Group Discovery in a Clinical Database of Patients with Psychosis Who Have Undergone Metacognitive Training
Management and Analysis of Protein-to-Protein Interaction Data
Methods and Tools to Facilitate RE:IN Modeling and Analysis of GRNs
COSYS: A Computational Infrastructure for Systems Biology
SILACAnalyzer - A Tool for Differential Quantitation of Stable Isotope Derived Data
Prediction of the Bonding State of Cysteine Residues in Proteins with Machine-Learning Methods
A Multivariate Algorithm for Gene Selection Based on the Nearest Neighbor Probability
Consensus Clustering in Gene Expression
Extended Spearman and Kendall Coefficients for Gene Annotation List Correlation
Inferring Breast Cancer Subtype Associations Using an Original Omics Integration Based on Non-negative Matrix Tri-Factorization
PHeP: TrustAlert Open-Source Platform for Enhancing Predictive Healthcare with Deep Learning
Effect of UV Radiation on DPPG and DMPC Liposomes in Presence of Catechin Molecules
Forward and Backward Feature Selection Guided by Prior Biological Knowledge for Enhanced Interpretability
Application of a New Ridge Estimator of the Inverse Covariance Matrix to the Reconstruction of Gene-Gene Interaction Networks
Deep Clustering for Metagenomics
Computational Intelligence Methods for Bioinformatics and Biostatistics - 12th International Meeting, CIBB 2015, Naples, Italy, September 10-12, 2015, Revised Selected Papers
Spatial Clustering of Molecular Dynamics Trajectories in Protein Unfolding Simulations
Two Covariances Harnessing Fuzzy Clustering Based PCA for Discrimination of Microarray Data
Reverse Engineering Methodology for Bioinformatics Based on Genetic Programming, Differential Expression Analysis and Other Statistical Methods
Effective Use of Evolutionary Computation to Parameterise an Epidemiological Model
A Nano Communication System for CTC Detection in Blood Vessels
Coarse-Grained Modeling of the HIV-1 Protease Binding Mechanisms: II. Folding Inhibition
Transfer Learning and AutoML as a Support for the Pneumonia Diagnosis Using Chest X-ray Scan
Searching a Multivariate Partition Space Using MAX-SAT
MicroRNAs as Biomarkers for Ulcerative Colitis
Explainable AI Models for COVID-19 Diagnosis Using CT-Scan Images and Clinical Data
Boosted C5 Trees i-Biomarkers Panel for Invasive Bladder Cancer Progression Prediction
Inference in a Partial Differential Equations Model of Pulmonary Arterial and Venous Blood Circulation Using Statistical Emulation
Effect of EGCG on the DNA in Presence of UV Radiation
Control of Cellular Glycolysis by Perturbations in the Glucose Influx
Assessing Agreement between microRNA Microarray Platforms via Linear Measurement Error Models
Adenine: A HPC-Oriented Tool for Biological Data Exploration
Deep Learning Approaches for Forensics DNA Profiling: a Replication Study
Splice Site Prediction Using Artificial Neural Networks
Basics of Game Theory for Bioinformatics
Observability of Bacterial Growth Models in Bubble Column Bioreactors
Extracting Key Pathways from Gene Signature and Genetic Aberrations in Subtypes of Cancer
Drug Repurposing by Optimizing Mining of Genes Target Association
A Deep Learning Approach to DNA Sequence Classification
Module Detection in Dynamic Networks by Temporal Edge Weight Clustering
Structural Features of a DPPG Liposome Layer Adsorbed on a Rough Surface
Non-thermal Atmospheric Pressure Plasmas: Generation, Sources and Applications
A Problem-Driven Approach for Building a Bioinformatics GraphDB
A Network Approach to Aquatic Food Web Dynamics
Proteins Transcription Factor Prediction Using Graph Neural Networks
French Flag Tracking by Morphogenetic Simulation Under Developmental Constraints
Network Modeling and Analysis of Normal and Cancer Gene Expression Data
Computational Intelligence Methods for Bioinformatics and Biostatistics - 9th International Meeting, CIBB 2012, Houston, TX, USA, July 12-14, 2012 Revised Selected Papers
A Novel Algorithm for CpG Island Detection in Human Genome Based on Clustering and Chaotic Particle Swarm Optimization
Combining Replicates and Nearby Species Data: A Bayesian Approach
A Theoretical Analysis of Visual Distributions of Ionizing-Radiation-Induced Foci in Human Cells by Heavy Ions
Improving Literature-Based Discovery with Advanced Text Mining
High-Dimensional Multi-trait GWAS By Reverse Prediction of Genotypes Using Machine Learning Methods
Exposing and Characterizing Subpopulations of Distinctly Regulated Genes by K-Plane Regression
Identification of Key miRNAs in Regulation of PPI Networks
Standardizing Agent Communication
Cooperating Physical Robots: A Lesson in Playing Robotic Soccer
Agents' Advanced Features for Negotiation and Coordination
Agent-Based Modelling of Ecosystems for Sustainable Resource Management
Specialised Agent Applications
Virtual Enterprise Modeling and Support Infrastructures: Applying Multi-agent System Approaches
Emotions and Agents
Distributed Problem Solving and Planning
Perspectives on Organizations in Multi-agent Systems
Machine Learning and Inductive Logic Programming for Multi-agent Systems
A Multi-agent Study of Interethnic Cooperation
Automated Negotiation and Decision Making in Multiagent Environments
Multi-Agent Systems and Applications, 9th ECCAI Advanced Course ACAI 2001 and Agent Link's 3rd European Agent Systems Summer School, EASSS 2001, Prague, Czech Republic, July 2-13, 2001, Selected Tutorial Papers
Multi-agent Infrastructure, Agent Discovery, Middle Agents for Web Services and Interoperation
Towards Heterogeneous Agent Teams
Logical Foundations of Agent-Based Computing
Multi-agent Coordination and Control Using Stigmergy Applied to Manufacturing Control
Standardizing Agent Interoperability: The FIPA Approach
From Statistics to Emergence: Exercises in Systems Modularity
Social Knowledge in Multi-agent Systems
Emerging Results on Automated Support for Searching and Selecting Evidence for Systematic Literature Review Updates
Analyzing and Interpreting Software Development Cost Estimation Error
Towards Evaluation Guidelines for Empirical Studies Involving LLMs
Proceedings of the 1st IEEE/ACM International Workshop on Methodological Issues with Empirical Studies in Software Engineering, WSESE 2024, Lisbon, Portugal, 16 April 2024
Apples, Oranges, and Software Engineering: Study Selection Challenges for Secondary Research on Latent Variables
IEEE/ACM International Workshop on Methodological Issues with Empirical Studies in Software Engineering, WSESE@ICSE 2025, Ottawa, ON, Canada, May 3, 2025
A Second Look at the Impact of Passive Voice Requirements on Domain Modeling: Bayesian Reanalysis of an Experiment
Methodological and Practical Challenges in Longitudinal, Large-Scale, Collaborative Questionnaire Survey Research
Evidence Tetris in the Pixelated World of Validity Threats
Can Machine Learning Support the Selection of Studies for Systematic Literature Review Updates?
Lessons Learned from Mining the Hugging Face Repository
Exploring How SE Academic Papers Use Figures
Grounded Theory in Software Engineering: Challenges and Lessons Learned from the Trenches
Are You a Real Software Engineer? Best Practices in Online Recruitment for Software Engineering Studies
On the Difficulties of Conducting and Replicating Systematic Literature Reviews Studies Using LLMs in Software Engineering
Integrating Positionality Statements in Empirical Software Engineering Research
Large Language Model for Qualitative Research: A Systematic Mapping Study
FAIR enough: a Vision for Research Objects in Empirical Software Engineering Studies
A Conceptual Framework and Recommendations for Open Data and Artifacts in Empirical Software Engineering
Who's actually being Studied? A Call for Population Analysis in Software Engineering Research
Insights Towards Better Case Study Reporting in Software Engineering
Hidden Populations in Software Engineering: Challenges, Lessons Learned, and Opportunities
Applications and Implications of Large Language Models in Qualitative Analysis: A New Frontier for Empirical Software Engineering
A Framework for Using LLMs for Repository Mining Studies in Empirical Software Engineering
The Role of Data Filtering in Open Source Software Ranking and Selection
On the Relevance of Paper-Type Information in Systematic Mapping Studies in Software Engineering
Revisiting the construct and assessment of industrial relevance in software engineering research
DeepHTTP: Anomalous HTTP Traffic Detection and Malicious Pattern Mining Based on Deep Learning
A Review of Machine Learning Algorithms for Text Classification
FPFlow: Detect and Prevent Browser Fingerprinting with Dynamic Taint Analysis
A Robust and Adaptive Watermarking Technique for Relational Database
Research on the Development Route of International Communication Accesses
Cyber Security - 19th China Annual Conference, CNCERT 2022, Beijing, China, August 16-17, 2022, Revised Selected Papers
Cyber Security - 18th China Annual Conference, CNCERT 2021, Beijing, China, July 20-21, 2021, Revised Selected Papers
Research on the Remote Deployment Design of OTN Electrical Racks
Perosonalized Differentially Private Location Collection Method with Adaptive GPS Discretization
A Model of APT Attack Defense Based on Cyber Threat Detection
Association Visualization Analysis for the Application Service Layer and Network Control Layer
Detecting Bitcoin Nodes by the Cyberspace Search Engines
Research Status and Prospect of Blockchain Technology in Agriculture Field
A Self-supervised Adversarial Learning Approach for Network Intrusion Detection System
Research on Identity Authentication Method Based on Negative Logic System
Efficient Classification of Darknet Access Activity with Partial Traffic
Embedded Security-Critical Device Resource Isolation
An Effective Intrusion Detection Model Based on Pls-Logistic Regression with Feature Augmentation
Improving Deepfake Video Detection with Comprehensive Self-consistency Learning
A Secure Ranked Search Model Over Encrypted Data in Hybrid Cloud Computing
Research on the Recognition of Internet Buzzword Features Based on Transformer
A Survey on Cyberspace Search Engines
Practical DDoS Attack Group Discovery and Tracking with Complex Graph-Based Network
Brief Analysis for Network Security Issues in Mega-Projects Approved for Data Clusters
An Intelligent Data Flow Security Strategy Model of Cloud-Network Integration
Research on Named Entity Recognition Method of Network Threat Intelligence
CMPD: Context-Based Malicious Parameter Detection for APIs
Smart Contract Vulnerability Detection Based on Symbolic Execution Technology
A Label Propagation Based User Locations Prediction Algorithm in Social Network
MinerGate: A Novel Generic and Accurate Defense Solution Against Web Based Cryptocurrency Mining Attacks
Automatic and Accurate Detection of Webshell Based on Convolutional Neural Network
Security Against Network Attacks on Web Application System
Extension of ISO/IEC27001 to Mobile Devices Security Management
Design of Multi-dimensional Electronic Channel Unified Identity Authentication Method for Power Information System
End-Link Collaboration Control Mechanism in Intelligent Networks Based on Traffic Classification
Research on Industrial Internet Security Emergency Management Framework Based on Blockchain: Take China as an Example
Cyber Security - 17th China Annual Conference, CNCERT 2020, Beijing, China, August 12, 2020, Revised Selected Papers
Analysis of Address Linkability in Tornado Cash on Ethereum
ExitSniffer: Towards Comprehensive Security Analysis of Anomalous Binding Relationship of Exit Routers
Cyber Security - 15th International Annual Conference, CNCERT 2018, Beijing, China, August 14-16, 2018, Revised Selected Papers
Research and Practice of TCP Protocol Optimization in Mobile Internet
Based on GAN Generating Chaotic Sequence
Brief Introduction of Network Security Asset Management for Banks
Malicious Websites Identification Based on Active-Passive Method
Anomaly Detection of E-commerce Econnoisseur Based on User Behavior
Research on Information Security Asset Value Assessment Methodology
Considerations on Evaluation of Practical Cloud Data Protection
Research Towards Key Issues of API Security
Knowledge Graph Construction Research From Multi-source Vulnerability Intelligence
Research on Adversarial Patch Attack Defense Method for Traffic Sign Detection
Webpage Tampering Detection Method Based on BiGRU-CRF-RCNN
An Overview of Blockchain Security Analysis
Malware Detection with Neural Network Using Combined Features
Research on the Relationship Between Chinese Nicknames and Accounts in Social Networks
Trusted Secure Accessing Protection Framework Based on Cloud-Channel-Device Cooperation
A Multi-task Text Classification Model Based on Label Embedding Learning
Android Malware Detection Method Based on Frequent Pattern and Weighted Naive Bayes