yusuke1997/dblp-id-title huggingface dataset:
Mixed 0-1 Linear Programming Approach for DNA Transcription Element Identification
Stochastic Network Problems: Massively Parallel Solution
Dynamic Programming and Newton's Method in Unconstrained Optimal Control
Semi-infinite Programming: Second Order Optimality Conditions
Replicator Dynamics in Combinatorial Optimization
Global Optimization in Location Problems
Semi-infinite Programming: Numerical Methods
Bilevel Programming: Applications in Engineering
Optimal Planning of Offshore Oilfield Infrastructure
Implicit Lagrangian
Probabilistic Constrained Linear Programming: Duality Theory
Von Neumann, John
De Novo Protein Design Using Flexible Templates
Least Squares Orthogonal Polynomials
Bilevel Programming Framework for Enterprise-Wide Process Networks Under Uncertainty
Rosenbrock Method
Integer Programming: Branch and Bound Methods
Sensitivity and Stability in NLP: Continuity and Differential Stability
Nondifferentiable Optimization: Newton Method
Interval Analysis: Application to Chemical Engineering Design Problems
Stochastic Programming: Nonanticipativity and Lagrange Multipliers
Set Covering, Packing and Partitioning Problems
Contact Map Overlap Maximization Problem, CMO
Short-Term Scheduling, Resource Constrained: Unified Modeling Frameworks
Topology Optimization
Quasidifferentiable Optimization: Algorithms for Hypodifferentiable Functions
Multi-Scale Global Optimization Using Terrain/Funneling Methods
Saddle Point Theory and Optimality Conditions
Convexifiable Functions, Characterization of
Competitive Facility Location
Smooth Nonlinear Nonconvex Optimization
Quasidifferentiable Optimization: Variational Formulations
State of the Art in Modeling Agricultural Systems
Nondifferentiable Optimization: Relaxation Methods
Generalized Concavity in Multi-objective Optimization
Young Programming
Standard Quadratic Optimization Problems: Theory
Static Stochastic Programming Models
Robust Design of Dynamic Systems by Constructive Nonlinear Dynamics
Stochastic Programs with Recourse: Upper Bounds
Protein-Carbohydrate Interactions
Stochastic Methods for Global Optimization and Problem Solving
Models and Languages for High-Performance Computing
Protein Structure Databases
Constructing Computational Pipelines
Genetics and Population Analysis
Pathway Informatics
Gene Regulatory Network Review
Disease Biomarker Discovery
Infrastructures for High-Performance Computing: Cloud Infrastructures
Phylogenetic Analysis: Early Evolution of Life
Prediction of Protein Localization
RNA Structure Prediction
Data Mining: Outlier Detection
Expression Clustering
Dedicated Bioinformatics Analysis Hardware
Genome Analysis - Identification of Genes Involved in Host-Pathogen Protein-Protein Interaction Networks
Mapping the Environmental Microbiome
Genome Databases and Browsers for Cancer
Single Nucleotide Polymorphism Typing
Functional Enrichment Analysis Methods
Homologous Protein Detection
Standards and Models for Biological Data: BioPAX
Genome-Wide Scanning of Gene Expression
Next Generation Sequence Analysis
Biological Database Searching
Biological and Medical Ontologies: Introduction
Multiple Learners Combination: Boosting
Biological Databases
Algorithms for Strings and Sequences: Pairwise Alignment
Identification of Sequence Patterns, Motifs and Domains
Visualization of Biomedical Networks
Introduction to Biostatistics
Integrative Analysis of Multi-Omics Data
Predicting Non-Synonymous Single Nucleotide Variants Pathogenic Effects in Human Diseases
Network Inference and Reconstruction in Bioinformatics
Network-Based Analysis for Biological Discovery
Epigenetics: Analysis of Cytosine Modifications at Single Base Resolution
Intelligent Agents: Multi-Agent Systems
Visualization of Biological Pathways
Protein Design
Graphlets and Motifs in Biological Networks
Performance Measures for Binary Classification
Gene-Gene Interactions: An Essential Component to Modeling Complexity for Precision Medicine
Ontology-Based Annotation Methods
Epidemiology: A Review
Biological Pathway Data Formats and Standards
Ecosystem Monitoring Through Predictive Modeling
Pre-Processing: A Data Preparation Step
Experimental Platforms for Extracting Biological Data: Mass Spectrometry, Microarray, Next Generation Sequencing
Whole Genome Sequencing Analysis
Immunoglobulin Clonotype and Ontogeny Inference
Computational Systems Biology
Ontology: Definition Languages
Alignment of Protein-Protein Interaction Networks
Bioinformatics Approaches for Studying Alternative Splicing
Data Integration and Transformation
Differential Expression From Microarray and RNA-seq Experiments
Protein Structure Visualization
Host-Pathogen Interactions
Population-Based Sampling and Fragment-Based De Novo Protein Structure Prediction
Standards and Models for Biological Data: Common Formats
Identification of Homologs
Cell Modeling and Simulation
Inference of Horizontal Gene Transfer: Gaining Insights Into Evolution via Lateral Acquisition of Genetic Material
Repeat in Genomes: How and Why You Should Consider Them in Genome Analyses?
Detecting and Annotating Rare Variants
Protein-DNA Interactions
Proteomics Mass Spectrometry Data Analysis Tools
Molecular Phylogenetics
Protein Properties
Transcriptome Analysis
Protein-Peptide Interactions in Regulatory Events
Survey of Antisense Transcription
Epitope Predictions
Integrative Bioinformatics
Algorithms for Graph and Network Analysis: Clustering and Search of Motifs in Graphs
Transmembrane Domain Prediction
Text Mining Resources for Bioinformatics
Protein Three-Dimensional Structure Prediction
Comparative Genomics Analysis
Large Scale Ecological Modeling With Viruses: A Review
Proteomics Data Representation and Databases
Metabolic Profiling
Transcription Factor Databases
Computational Prediction of Nucleic Acid Binding Residues From Sequence
Bioinformatics Data Models, Representation and Storage
Computing Languages for Bioinformatics: R
Data-Information-Concept Continuum From a Text Mining Perspective
Characterizing and Functional Assignment of Noncoding RNAs
Nonlinear Regression Models
Fingerprints and Pharmacophores
Algorithms Foundations
Multi-Scale Modelling in Biology
Correlation Analysis
Computational Tools for Structural Analysis of Proteins
Network Topology
Computational Protein Engineering Approaches for Effective Design of New Molecules
Small Molecule Drug Design
Computational Systems Biology Applications
Measurements of Accuracy in Biostatistics
Computational Immunogenetics
Integrative Bioinformatics of Transcriptome: Databases, Tools and Pipelines
Segmentation Techniques for Bioimages
Encyclopedia of Bioinformatics and Computational Biology - Volume 1
Extraction of Immune Epitope Information
Introduction to the Non-Parametric Bootstrap
Next Generation Sequencing Data Analysis
Evolutionary Models
Chemoinformatics: From Chemical Art to Chemistry in Silico
Prediction of Protein-Binding Sites in DNA Sequences
Drug Repurposing and Multi-Target Therapies
Protocol for Protein Structure Modelling
Identification and Extraction of Biomarker Information
Multilayer Perceptrons
Biological Pathway Analysis
Community Detection in Biological Networks
Multiple Learners Combination: Introduction
Association Rules and Frequent Patterns
Ontology in Bioinformatics
Pipeline of High Throughput Sequencing
The Gene Ontology
Protein-Protein Interaction Databases
Network Properties
Knowledge Discovery in Databases
Algorithms for Strings and Sequences: Multiple Alignment
Transcriptomic Databases
Functional Genomics
Binding Site Comparison - Software and Applications
Computing Languages for Bioinformatics: BioPerl
Gene Duplication and Speciation
Chromatin: A Semi-Structured Polymer
Metagenomic Analysis and its Applications
Protein Structural Bioinformatics: An Overview
Networks in Biology
Encyclopedia of Bioinformatics and Computational Biology - Volume 2
Data Storage and Representation
Prediction of Coding and Non-Coding RNA
Algorithms for Structure Comparison and Analysis: Docking
In Silico Identification of Novel Inhibitors
Learning Chromatin Interaction Using Hi-C Datasets
Biological and Medical Ontologies: Protein Ontology (PRO)
Multiple Learners Combination: Cascading
Kernel Machines: Introduction
Bayes' Theorem and Naive Bayes Classifier
Data Mining: Prediction Methods
Infrastructure for High-Performance Computing: Grids and Grid Computing
Artificial Intelligence and Machine Learning in Bioinformatics
Data Mining: Classification and Prediction
Two Decades of Biological Pathway Databases: Results and Challenges
Metabolome Analysis
Protein Post-Translational Modification Prediction
Data Mining in Bioinformatics
Ontology: Introduction
Data Mining: Mining Frequent Patterns, Associations Rules, and Correlations
Structural Genomics
Standards and Models for Biological Data: SBML
Structure-Based Drug Design Workflow
Data Mining: Accuracy and Error Measures for Classification and Prediction
Text Mining for Bioinformatics Using Biomedical Literature
Encyclopedia of Bioinformatics and Computational Biology - Volume 3
Genome Annotation: Perspective From Bacterial Genomes
Techniques for Designing Bioinformatics Algorithms
Pharmacophore Development
Text Mining Basics in Bioinformatics
Engineering of Supramolecular RNA Structures
Introduction of Docking-Based Virtual Screening Workflow Using Desktop Personal Computer
Analyzing Transcriptome-Phenotype Correlations
Genome Databases and Browsers
Genome Informatics
Structure-Based Design of Peptide Inhibitors for Protein Arginine Deiminase Type IV (PAD4)
Infrastructures for High-Performance Computing: Cloud Computing Development Environments
Knowledge and Reasoning
Biological and Medical Ontologies: GO and GOA
Chemical Similarity and Substructure Searches
Data Formats for Systems Biology and Quantitative Modeling
Study of the Variability of the Native Protein Structure
Comparative Transcriptomics Analysis
Molecular Mechanisms Responsible for Drug Resistance
Electronic Health Record Integration
Statistical and Probabilistic Approaches to Predict Protein Abundance
Network-Based Analysis of Host-Pathogen Interactions
Quantification of Proteins From Proteomic Analysis
Text Mining Applications
Genome-Wide Probing of RNA Structure
Cloud-Based Bioinformatics Platforms
Unsupervised Learning: Clustering
Mutation Effects on 3D-Structural Reorganization Using HIV-1 Protease as a Case Study
Exome Sequencing Data Analysis
DNA Barcoding: Bioinformatics Workflows for Beginners
Investigating Metabolic Pathways and Networks
Genome-Wide Haplotype Association Study
The Challenge of Privacy in the Cloud
Molecular Dynamics Simulations in Drug Discovery
Computing Languages for Bioinformatics: Python
Applications of Ribosomal RNA Sequence and Structure Analysis for Extracting Evolutionary and Functional Insights
Preclinical: Drug Target Identification and Validation in Human
Public Chemical Databases
Protein Structure Analysis and Validation
Network Models
Infrastructures for High-Performance Computing: Cloud Computing
Computational Lipidomics
Genome Alignment
Quantitative Immunology by Data Analysis Using Mathematical Models
Tree Evaluation and Robustness Testing
Algorithms for Structure Comparison and Analysis: Homology Modelling of Proteins
Biological and Medical Ontologies: Human Phenotype Ontology (HPO)
Multiple Learners Combination: Bagging
Proteome Informatics
Protein-Protein Interactions: An Overview
Gene Prioritization Tools
Applications of the Coalescent for the Evolutionary Analysis of Genetic Data
Translational Bioinformatics Databases
Standards and Models for Biological Data: FGED and HUPO
Transcriptomic Data Normalization
Regulation of Gene Expression
Identifying Functional Relationships Via the Annotation and Comparison of Three-Dimensional Amino Acid Arrangements in Protein Structures
Algorithms for Graph and Network Analysis: Traversing/Searching/Sampling Graphs
Functional Enrichment Analysis
Computational Pipelines and Workflows in Bioinformatics
Rational Structure-Based Drug Design
Sequence Composition
Cloud-Based Bioinformatics Tools
Algorithms for Strings and Sequences: Searching Motifs
Parallel Architectures for Bioinformatics
Computing Languages for Bioinformatics: Perl
Ab initio Protein Structure Prediction
Biomolecular Structures: Prediction, Identification and Analyses
Biological and Medical Ontologies: Disease Ontology (DO)
Phylogenetic Footprinting
Codon Usage
Translational and Disease Bioinformatics
Algorithms for Graph and Network Analysis: Graph Alignment
Population Analysis of Pharmacogenetic Polymorphisms
Bioimage Databases
Computational Design and Experimental Implementation of Synthetic Riboswitches and Riboregulators
Decision Trees and Random Forests
Molecular Dynamics and Simulation
Parametric and Multivariate Methods
Kernel Machines: Applications
Nucleic-Acid Structure Database
Predicting RNA-RNA Interactions in Three-Dimensional Structures
MapReduce in Computational Biology Via Hadoop and Spark
Computing for Bioinformatics
Assessment of Structure Quality (RNA and Protein)
Quantitative Modelling Approaches
Models for Computable Phenotyping
Hypothesis Testing
Statistical Inference Techniques
Transcriptome During Cell Differentiation
Immunoinformatics Databases
Multiple Learners Combination: Stacking
Ecological Networks
Cloud-Based Molecular Modeling Systems
Graph Theory and Definitions
Computing Languages for Bioinformatics: Java
Mass Spectrometry-Based Metabolomic Analysis
Biological Pathways
Algorithms for Graph and Network Analysis: Graph Indexes/Descriptors
Computational Approaches for Modeling Signal Transduction Networks
Prediction of Protein-Protein Interactions: Looking Through the Kaleidoscope
Bioimage Informatics
Algorithms for Structure Comparison and Analysis: Prediction of Tertiary Structures of Proteins
Information Retrieval in Life Sciences
Clinical Proteomics
Semantic Similarity Definition
Vaccine Target Discovery
Genome-Wide Association Studies
Comparative Epigenomics
Intelligent Agents and Environment
Computation Cluster Validation in the Big Data Era
MicroRNA and lncRNA Databases and Analysis
Delta Rule and Backpropagation
Ontology: Querying Languages and Development
Network Centralities and Node Ranking
Study of Human Antibody Responses From Analysis of Immunoglobulin Gene Sequences
Kernel Methods: Support Vector Machines
Comparative and Evolutionary Genomics
Supervised Learning: Classification
Quantitative Structure-Activity Relationship (QSAR): Modeling Approaches to Biological Applications
Biodiversity Databases and Tools
Profiling the Gut Microbiome: Practice and Potential
Data Mining: Clustering
Studies of Body Systems
Natural Language Processing Approaches in Bioinformatics
Metabolic Models
Protein Structure Classification
Utilising IPG-IEF to Identify Differentially-Expressed Proteins
Tools for Semantic Analysis Based on Semantic Similarity
Protein Functional Annotation
The Evolution of Protein Family Databases
Gene Mapping
Semantic Similarity Functions and Measures
Biological and Medical Ontologies: Systems Biology Ontology (SBO)
Identification of Proteins From Proteomic Analysis
Transcriptome Informatics
Phylogenetic Tree Rooting
Challenges in Creating Online Biodiversity Repositories With Taxonomic Classification
Gene Prioritization Using Semantic Similarity
Cluster Analysis of Biological Networks
Coupling Cell Division to Metabolic Pathways Through Transcription
Characterization of Transcriptional Activities
Secondary Structure Prediction
Generative Model
Small Communities in Social Networks
Random Processes
Cryptography and Communications Privacy: An Introduction
Political Prediction Markets
Crowdsourced Social Data for Recommending Tourist Itineraries
Social Structural Analysis
Managing Online Information Flows
Algebraic Path Problem
Invisible Web
Query Spelling Correction
Social Internet of Mobile Things and Decision Support Tools
Scale-Free Nature of Social Networks
Trust in Social Networks
Keyword Clouds
Temporal Analytics
Scalable Distributed Systems
Similarity Metrics on Social Networks
Multiplication of Matrices
Sentiment Analysis in Social Media
Relational Analysis
Paths in Complex Networks
Automatic Document Topic Identification
Statistical Simulation
Query Sessions
Social Graph Dataset
Social Network Datasets
Multilayer Social Networks
Data Mash-Ups
Social Grids
Singular Value Decomposition = Principal Component Analysis
Social Engineering/Phishing
Multiple Social Networks, Data Models and Measures for
Relational Feature
Networks in Geography
Social Indexing
Markov Chain Monte Carlo Algorithms
Longitudinal Network Analysis
Web Mash-Ups
Consequences of Publishing Real Personal Information in Online Social Networks
Anonymization of Data
Homogeneity Analysis
Network Similarity
Addition and Subtraction of Matrices
Tulip III
Relevance Ranking
Graph Classification
Uncertain Data
Network Data Collected via Web
Twitter Opinion Mining
Eigenvalue and Eigenvector - Characteristic Value and Characteristic Vector
Participation Dynamicity
Motif Analysis
Social Collaborative Media in Software Development
Latent Relationship
Pornography Online
Spatio-temporal Querying of Big Data and Results Summarization
Network Dynamics
Matrix Algebra, Basics of
Web Services Definition Language (WSDL)
Social Group Evolution
Quantitative Measurement
Tracking Political Sentiment
Social Communication Network: Case Study
Board Interlocks
Spatiotemporal Topic Detection from Social Media
Trust Evaluation
Simple Event
Cause of Behaviors
Role Identification of Social Networkers
Social Selection
Aesthetics in Social Media
Scholarly Communication
Mobile Sensing Technologies
Service Search and Selection
Directed Network
Meaning of Social Structures
Top Management Team Networks
Optimal Scaling
SNA Software
Ethical Aspects of Online Social Network Analysis and Mining Research
Visual Exploration
Stream Querying and Reasoning on Social Data
Disciplinary
Digital Democracy
Spatiotemporal Reasoning and Decision Support Tools
User Behavior in Online Social Networks, Influencing Factors
Sentiment Classification
Summary Statistics
Friend Recommender System
Social Networking Services
Collective Intelligence: Overview
Networks Dynamics Analysis
Complex Network Analysis
Opinion Diffusion and Analysis on Social Networks
Geo-Social Networking Services
W3C Standard RDF Query Language
Spatiotemporal Personalized Recommendation of Social Media Content
Social Search and Querying
Twitris: A System for Collective Social Intelligence
Dynamic Social Networks
Boundary Problem
Social Groups in Crowd
Markov Graphs
Group Representation and Profiling
New Intermediaries of Personal Information: The FB Ecosystem
Tag-Based Recommender Systems
Game Theory and Social Networks
Research Challenges
Subgraph Identification
Intraclass Analysis
Online Privacy Paradox and Social Networks
Regression Line
Social Recommendation in Dynamic Networks
Recommender Systems: Models and Techniques
Network Actors
Measurement and Analysis of Online Social Networks Systems
Trust Network
Search Missions
Dynamical Graphs
Policy Networks
Collective Classification: Structural Features
Modeling Social Preferences Based on Social Interactions
Semantic Social Networks Analysis
Online Social Networks' Concepts
Trend Detection
Network Games
Complex Social Networks
Siena: Statistical Modeling of Longitudinal Network Data
Stress Model
Graphics Processors
User-Generated Content
Metropolis Hastings
Content Communities
Heterogeneous Information Networks
Proper Values
Virtual Crime
Gaming and Virtual Worlds
Core Graph Decomposition
Combining Link and Content for Community Detection
p-Star Models
Web Service Composition
Analysis of Social Relations
Time-Stamped Graphs
Canonical Variate Analysis
Boundary Spanning
Computer Literacy
Online Forums
Evolution of Communities
Collecting Qualitative Data to Enhance Social Network Analysis and Data Mining
Social Weight
Scan Statistics
Prevention
Recommender Platform
Transportable Networks
Privacy Issues for SNS and Mobile SNS
Questionnaires for Measuring Social Network Contacts
Social Ties Inferring
Lattices and Ties
ORA-Lite
Multidimensional Social Networks
Place Recommendation
History and Evolution of Social Network Visualization
Citizen Sensing
Community Computing
Privacy, Dataveillance, and Crime Prevention
Entrepreneurial Networks
Out-of-Town Recommendation
Social Media, Definition and History
Web Preservation
User Interfaces for Data Disclosure
Time-Sensitive Recommendation
Consistent and Inconsistent System
Community Evolution
Consumer Health Informatics
Over-Justification
Nature of Social Structures
Networks of Practice
Online Health
Query Answering in the Semantic Social Web: An Argumentation-Based Approach
Network Sampling
Friends Recommendations in Dynamic Social Networks
Role Discovery
Cognitive Strategic Groups
Personally Identifiable Information
Self-Efficacy vs. Expertise
Virtual Team
NETDRAW
Kinship Analysis
Social Network History
Sentiment-Emotion-Intent Analysis
Collaborative Tagging
Advisory Systems
Social Factor
Social Classification
Cramer Rule
Repository for Multirelational Dynamic Networks
Massively Multiplayer Online Game
Symmetric and Skew-Symmetric Matrices
French Social Science History
Social Network Mining
Eigenvalue with the Largest Magnitude - Dominant Eigenvalue
Prescribed Versus Emergent Organizational Structure
Microblog Sentiment Analysis
Collaboration Analysis
Querying and Summarizing Social Networks Posts with Respect to Spatial and Temporal Dimensions
Virtual Items
Information Filtering
Peer Influence
Multidimensional
Futures of Social Networks: Where Are Trends Heading?
Sociology of the Web
Transportation Systems
Location-Based Online Social Networks: Location-Based Online Social Media, Location-Based Online Social Services
Web Services Description Language (WSDL)
Spatiotemporal Context-Aware Recommendation
Policy Networks: History
Supply Chain Relations
Web Ontology Language (OWL)
Social-Based Collaborative Filtering
Social Media and Social Networking in Political Campaigns/Movements
Online Communities, Constellation of Communities
Attributed Graph
Strategic Allocation of Resources
Mathematical Model for Propagation of Influence in a Social Network
High-Dimensional Data
Network Actors Within Entrepreneurial Networks: The Current State of Research
Signed Network
Tracking Dynamic Community Evolution and Events Mobility in Social Networks
Data Mining and Knowledge Discovery in Economic Networks
Crowdsourcing and Human Computation, Introduction
Network: Graph
Multilayered Social Networks
Uses and Gratifications
Community Mining
Polarity Distribution
Document Indexing
Network Management and Governance
Social Capital in Business
Trust Prediction
Volunteered Geographic Information
Social Network-Based Recommender Systems
Analysis and Mining of Tags, (Micro)Blogs, and Virtual Communities
Social Media, Definition, and History
Actionable Information in Social Networks, Diffusion of
Stability and Evolution of Scientific Networks
Modeling Temporal User Interests
Eigenvalues: Singular Value Decomposition
Dynamic Networks
Analysis and Visualization of Dynamic Networks
Clandestine Networks
Recommender Systems Based on Linked Open Data
Social-Based Recommendations
Social Networks in Healthcare, Case Study
Markov Matrix
Evolving Social Graph Clustering
Web-Like Networks
Social Network Security
Opinion Spam
Clustering Objective Function
Geodesic: Shortest Path
Personal Communities
Group Recommendations
East Asia
Social Networking in the Telecom Industry
Network or Graph Visualization
Probability Distributions
Trial Heat Polls
Demographic Structure
Node Centrality
Structural Autonomy
Web-Based Social Networks
Research Designs for Social Network Analysis
Social Networks in Emergency Response
Temporal Analysis on Static and Dynamic Social Networks Topologies
Network Entrepreneurs
Social Communication Network, Case Study
Temporal Analysis
Identifying Spam in Reviews
Network of Networks
Arts and Humanities, Complex Network Analysis of
Space-Embedded Networks
Social Collaborative Media
Web Services Definition Language
Models for Community Dynamics
Sociograms
Spectral Network Analysis
Computer-Mediated Group
New City Recommendation
Content-Based Recommendation
Networks at Harvard University Sociology
Content and Opinion Social Network Applications
Influence Propagation
East Asian Social Networks
Information Provenance
Estimation Theory
Mobility/Activity Diary
User Behavior
Scale-Free Distributions
Choice of Setting