ymoslem/acl-abstracts huggingface dataset:
Biomedical Concept Normalization by Leveraging Hypernyms (2021)

Biomedical Concept Normalization (BCN) is widely used in biomedical text processing as a fundamental module. Owing to numerous surface variants of biomedical concepts, BCN still remains challenging and unsolved. In this paper, we exploit biomedical concept hypernyms to facilitate BCN. We propose Biomedical Concept Normalizer with Hypernyms (BCNH), a novel framework that adopts list-wise training to make use of both hypernyms and synonyms, and also employs norm constraint on the representation of hypernym-hyponym entity pairs. The experimental results show that BCNH outperforms the previous state-of-the-art model on the NCBI dataset.
Leveraging Capsule Routing to Associate Knowledge with Medical Literature Hierarchically (2021)

Integrating knowledge into text is a promising way to enrich text representation, especially in the medical field. However, undifferentiated knowledge not only confuses the text representation but also imports unexpected noises. In this paper, to alleviate this problem, we propose leveraging capsule routing to associate knowledge with medical literature hierarchically (called HiCapsRKL). Firstly, HiCapsRKL extracts two empirically designed text fragments from medical literature and encodes them into fragment representations respectively. Secondly, the capsule routing algorithm is applied to two fragment representations. Through the capsule computing and dynamic routing, each representation is processed into a new representation (denoted as caps-representation), and we integrate the caps-representations as information gain to associate knowledge with medical literature hierarchically. Finally, HiCapsRKL are validated on relevance prediction and medical literature retrieval test sets. The experimental results and analyses show that HiCapsRKLcan more accurately associate knowledge with medical literature than mainstream methods. In summary, HiCapsRKL can efficiently help selecting the most relevant knowledge to the medical literature, which may be an alternative attempt to improve knowledge-based text representation. Source code is released on GitHub.
Label-Enhanced Hierarchical Contextualized Representation for Sequential Metaphor Identification (2021)

Recent metaphor identification approaches mainly consider the contextual text features within a sentence or introduce external linguistic features to the model. But they usually ignore the extra information that the data can provide, such as the contextual metaphor information and broader discourse information. In this paper, we propose a model augmented with hierarchical contextualized representation to extract more information from both sentence-level and discourse-level. At the sentence level, we leverage the metaphor information of words that except the target word in the sentence to strengthen the reasoning ability of our model via a novel label-enhanced contextualized representation. At the discourse level, the position-aware global memory network is adopted to learn long-range dependency among the same words within a discourse. Finally, our model combines the representations obtained from these two parts. The experiment results on two tasks of the VUA dataset show that our model outperforms every other state-of-the-art method that also does not use any external knowledge except what the pre-trained language model contains.
SpellBERT: A Lightweight Pretrained Model for Chinese Spelling Check (2021)

Chinese Spelling Check (CSC) is to detect and correct Chinese spelling errors. Many models utilize a predefined confusion set to learn a mapping between correct characters and its visually similar or phonetically similar misuses but the mapping may be out-of-domain. To that end, we propose SpellBERT, a pretrained model with graph-based extra features and independent on confusion set. To explicitly capture the two erroneous patterns, we employ a graph neural network to introduce radical and pinyin information as visual and phonetic features. For better fusing these features with character representations, we devise masked language model alike pre-training tasks. With this feature-rich pre-training, SpellBERT with only half size of BERT can show competitive performance and make a state-of-the-art result on the OCR dataset where most of the errors are not covered by the existing confusion set.
Automated Generation of Accurate \& Fluent Medical X-ray Reports (2021)

Our paper aims to automate the generation of medical reports from chest X-ray image inputs, a critical yet time-consuming task for radiologists. Existing medical report generation efforts emphasize producing human-readable reports, yet the generated text may not be well aligned to the clinical facts. Our generated medical reports, on the other hand, are fluent and, more importantly, clinically accurate. This is achieved by our fully differentiable and end-to-end paradigm that contains three complementary modules: taking the chest X-ray images and clinical history document of patients as inputs, our classification module produces an internal checklist of disease-related topics, referred to as enriched disease embedding; the embedding representation is then passed to our transformer-based generator, to produce the medical report; meanwhile, our generator also creates a weighted embedding representation, which is fed to our interpreter to ensure consistency with respect to disease-related topics. Empirical evaluations demonstrate very promising results achieved by our approach on commonly-used metrics concerning language fluency and clinical accuracy. Moreover, noticeable performance gains are consistently observed when additional input information is available, such as the clinical document and extra scans from different views.
Enhancing Document Ranking with Task-adaptive Training and Segmented Token Recovery Mechanism (2021)

In this paper, we propose a new ranking model DR-BERT, which improves the Document Retrieval (DR) task by a task-adaptive training process and a Segmented Token Recovery Mechanism (STRM). In the task-adaptive training, we first pre-train DR-BERT to be domain-adaptive and then make the two-phase fine-tuning. In the first-phase fine-tuning, the model learns query-document matching patterns regarding different query types in a pointwise way. Next, in the second-phase fine-tuning, the model learns document-level ranking features and ranks documents with regard to a given query in a listwise manner. Such pointwise plus listwise fine-tuning enables the model to minimize errors in the document ranking by incorporating ranking-specific supervisions. Meanwhile, the model derived from pointwise fine-tuning is also used to reduce noise in the training data of the listwise fine-tuning. On the other hand, we present STRM which can compute OOV word representation and contextualization more precisely in BERT-based models. As an effective strategy in DR-BERT, STRM improves the matching perfromance of OOV words between a query and a document. Notably, our DR-BERT model keeps in the top three on the MS MARCO leaderboard since May 20, 2020.
Abstract, Rationale, Stance: A Joint Model for Scientific Claim Verification (2021)

Scientific claim verification can help the researchers to easily find the target scientific papers with the sentence evidence from a large corpus for the given claim. Some existing works propose pipeline models on the three tasks of abstract retrieval, rationale selection and stance prediction. Such works have the problems of error propagation among the modules in the pipeline and lack of sharing valuable information among modules. We thus propose an approach, named as ARSJoint, that jointly learns the modules for the three tasks with a machine reading comprehension framework by including claim information. In addition, we enhance the information exchanges and constraints among tasks by proposing a regularization term between the sentence attention scores of abstract retrieval and the estimated outputs of rational selection. The experimental results on the benchmark dataset SciFact show that our approach outperforms the existing works.
A Fine-Grained Domain Adaption Model for Joint Word Segmentation and POS Tagging (2021)

Domain adaption for word segmentation and POS tagging is a challenging problem for Chinese lexical processing. Self-training is one promising solution for it, which struggles to construct a set of high-quality pseudo training instances for the target domain. Previous work usually assumes a universal source-to-target adaption to collect such pseudo corpus, ignoring the different gaps from the target sentences to the source domain. In this work, we start from joint word segmentation and POS tagging, presenting a fine-grained domain adaption method to model the gaps accurately. We measure the gaps by one simple and intuitive metric, and adopt it to develop a pseudo target domain corpus based on fine-grained subdomains incrementally. A novel domain-mixed representation learning model is proposed accordingly to encode the multiple subdomains effectively. The whole process is performed progressively for both corpus construction and model training. Experimental results on a benchmark dataset show that our method can gain significant improvements over a vary of baselines. Extensive analyses are performed to show the advantages of our final domain adaption model as well.
Answering Open-Domain Questions of Varying Reasoning Steps from Text (2021)

We develop a unified system to answer directly from text open-domain questions that may require a varying number of retrieval steps. We employ a single multi-task transformer model to perform all the necessary subtasks{---}retrieving supporting facts, reranking them, and predicting the answer from all retrieved documents{---}in an iterative fashion. We avoid crucial assumptions of previous work that do not transfer well to real-world settings, including exploiting knowledge of the fixed number of retrieval steps required to answer each question or using structured metadata like knowledge bases or web links that have limited availability. Instead, we design a system that can answer open-domain questions on any text collection without prior knowledge of reasoning complexity. To emulate this setting, we construct a new benchmark, called BeerQA, by combining existing one- and two-step datasets with a new collection of 530 questions that require three Wikipedia pages to answer, unifying Wikipedia corpora versions in the process. We show that our model demonstrates competitive performance on both existing benchmarks and this new benchmark. We make the new benchmark available at \url{https://beerqa.github.io/}.
Adaptive Information Seeking for Open-Domain Question Answering (2021)

Information seeking is an essential step for open-domain question answering to efficiently gather evidence from a large corpus. Recently, iterative approaches have been proven to be effective for complex questions, by recursively retrieving new evidence at each step. However, almost all existing iterative approaches use predefined strategies, either applying the same retrieval function multiple times or fixing the order of different retrieval functions, which cannot fulfill the diverse requirements of various questions. In this paper, we propose a novel adaptive information-seeking strategy for open-domain question answering, namely AISO. Specifically, the whole retrieval and answer process is modeled as a partially observed Markov decision process, where three types of retrieval operations (e.g., BM25, DPR, and hyperlink) and one answer operation are defined as actions. According to the learned policy, AISO could adaptively select a proper retrieval action to seek the missing evidence at each step, based on the collected evidence and the reformulated query, or directly output the answer when the evidence set is sufficient for the question. Experiments on SQuAD Open and HotpotQA fullwiki, which serve as single-hop and multi-hop open-domain QA benchmarks, show that AISO outperforms all baseline methods with predefined strategies in terms of both retrieval and answer evaluations.
Mapping probability word problems to executable representations (2021)

While solving math word problems automatically has received considerable attention in the NLP community, few works have addressed probability word problems specifically. In this paper, we employ and analyse various neural models for answering such word problems. In a two-step approach, the problem text is first mapped to a formal representation in a declarative language using a sequence-to-sequence model, and then the resulting representation is executed using a probabilistic programming system to provide the answer. Our best performing model incorporates general-domain contextualised word representations that were finetuned using transfer learning on another in-domain dataset. We also apply end-to-end models to this task, which bring out the importance of the two-step approach in obtaining correct solutions to probability problems.
Enhancing Multiple-choice Machine Reading Comprehension by Punishing Illogical Interpretations (2021)

Machine Reading Comprehension (MRC), which requires a machine to answer questions given the relevant documents, is an important way to test machines' ability to understand human language. Multiple-choice MRC is one of the most studied tasks in MRC due to the convenience of evaluation and the flexibility of answer format. Post-hoc interpretation aims to explain a trained model and reveal how the model arrives at the prediction. One of the most important interpretation forms is to attribute model decisions to input features. Based on post-hoc interpretation methods, we assess attributions of paragraphs in multiple-choice MRC and improve the model by punishing the illogical attributions. Our method can improve model performance without any external information and model structure change. Furthermore, we also analyze how and why such a self-training method works.
Large-Scale Relation Learning for Question Answering over Knowledge Bases with Pre-trained Language Models (2021)

The key challenge of question answering over knowledge bases (KBQA) is the inconsistency between the natural language questions and the reasoning paths in the knowledge base (KB). Recent graph-based KBQA methods are good at grasping the topological structure of the graph but often ignore the textual information carried by the nodes and edges. Meanwhile, pre-trained language models learn massive open-world knowledge from the large corpus, but it is in the natural language form and not structured. To bridge the gap between the natural language and the structured KB, we propose three relation learning tasks for BERT-based KBQA, including relation extraction, relation matching, and relation reasoning. By relation-augmented training, the model learns to align the natural language expressions to the relations in the KB as well as reason over the missing connections in the KB. Experiments on WebQSP show that our method consistently outperforms other baselines, especially when the KB is incomplete.
Phrase Retrieval Learns Passage Retrieval, Too (2021)

Dense retrieval methods have shown great promise over sparse retrieval methods in a range of NLP problems. Among them, dense phrase retrieval{---}the most fine-grained retrieval unit{---}is appealing because phrases can be directly used as the output for question answering and slot filling tasks. In this work, we follow the intuition that retrieving phrases naturally entails retrieving larger text blocks and study whether phrase retrieval can serve as the basis for coarse-level retrieval including passages and documents. We first observe that a dense phrase-retrieval system, without any retraining, already achieves better passage retrieval accuracy (+3-5{\%} in top-5 accuracy) compared to passage retrievers, which also helps achieve superior end-to-end QA performance with fewer passages. Then, we provide an interpretation for why phrase-level supervision helps learn better fine-grained entailment compared to passage-level supervision, and also show that phrase retrieval can be improved to achieve competitive performance in document-retrieval tasks such as entity linking and knowledge-grounded dialogue. Finally, we demonstrate how phrase filtering and vector quantization can reduce the size of our index by 4-10x, making dense phrase retrieval a practical and versatile solution in multi-granularity retrieval.
Neural Natural Logic Inference for Interpretable Question Answering (2021)

Many open-domain question answering problems can be cast as a textual entailment task, where a question and candidate answers are concatenated to form hypotheses. A QA system then determines if the supporting knowledge bases, regarded as potential premises, entail the hypotheses. In this paper, we investigate a neural-symbolic QA approach that integrates natural logic reasoning within deep learning architectures, towards developing effective and yet explainable question answering models. The proposed model gradually bridges a hypothesis and candidate premises following natural logic inference steps to build proof paths. Entailment scores between the acquired intermediate hypotheses and candidate premises are measured to determine if a premise entails the hypothesis. As the natural logic reasoning process forms a tree-like, hierarchical structure, we embed hypotheses and premises in a Hyperbolic space rather than Euclidean space to acquire more precise representations. Empirically, our method outperforms prior work on answering multiple-choice science questions, achieving the best results on two publicly available datasets. The natural logic inference process inherently provides evidence to help explain the prediction process.
Smoothing Dialogue States for Open Conversational Machine Reading (2021)

Conversational machine reading (CMR) requires machines to communicate with humans through multi-turn interactions between two salient dialogue states of decision making and question generation processes. In open CMR settings, as the more realistic scenario, the retrieved background knowledge would be noisy, which results in severe challenges in the information transmission. Existing studies commonly train independent or pipeline systems for the two subtasks. However, those methods are trivial by using hard-label decisions to activate question generation, which eventually hinders the model performance. In this work, we propose an effective gating strategy by smoothing the two dialogue states in only one decoder and bridge decision making and question generation to provide a richer dialogue state reference. Experiments on the OR-ShARC dataset show the effectiveness of our method, which achieves new state-of-the-art results.
FinQA: A Dataset of Numerical Reasoning over Financial Data (2021)

The sheer volume of financial statements makes it difficult for humans to access and analyze a business`s financials. Robust numerical reasoning likewise faces unique challenges in this domain. In this work, we focus on answering deep questions over financial data, aiming to automate the analysis of a large corpus of financial documents. In contrast to existing tasks on general domain, the finance domain includes complex numerical reasoning and understanding of heterogeneous representations. To facilitate analytical progress, we propose a new large-scale dataset, FinQA, with Question-Answering pairs over Financial reports, written by financial experts. We also annotate the gold reasoning programs to ensure full explainability. We further introduce baselines and conduct comprehensive experiments in our dataset. The results demonstrate that popular, large, pre-trained models fall far short of expert humans in acquiring finance knowledge and in complex multi-step numerical reasoning on that knowledge. Our dataset {--} the first of its kind {--} should therefore enable significant, new community research into complex application domains. The dataset and code are publicly available at \url{https://github.com/czyssrs/FinQA}.
FiD-Ex: Improving Sequence-to-Sequence Models for Extractive Rationale Generation (2021)

Natural language (NL) explanations of model predictions are gaining popularity as a means to understand and verify decisions made by large black-box pre-trained models, for tasks such as Question Answering (QA) and Fact Verification. Recently, pre-trained sequence to sequence (seq2seq) models have proven to be very effective in jointly making predictions, as well as generating NL explanations. However, these models have many shortcomings; they can fabricate explanations even for incorrect predictions, they are difficult to adapt to long input documents, and their training requires a large amount of labeled data. In this paper, we develop FiD-Ex, which addresses these shortcomings for seq2seq models by: 1) introducing sentence markers to eliminate explanation fabrication by encouraging extractive generation, 2) using the fusion-in-decoder architecture to handle long input contexts, and 3) intermediate fine-tuning on re-structured open domain QA datasets to improve few-shot performance. FiD-Ex significantly improves over prior work in terms of explanation metrics and task accuracy on five tasks from the ERASER explainability benchmark in both fully supervised and few-shot settings.
RockNER: A Simple Method to Create Adversarial Examples for Evaluating the Robustness of Named Entity Recognition Models (2021)

To audit the robustness of named entity recognition (NER) models, we propose RockNER, a simple yet effective method to create natural adversarial examples. Specifically, at the entity level, we replace target entities with other entities of the same semantic class in Wikidata; at the context level, we use pre-trained language models (e.g., BERT) to generate word substitutions. Together, the two levels of at- tack produce natural adversarial examples that result in a shifted distribution from the training data on which our target models have been trained. We apply the proposed method to the OntoNotes dataset and create a new benchmark named OntoRock for evaluating the robustness of existing NER models via a systematic evaluation protocol. Our experiments and analysis reveal that even the best model has a significant performance drop, and these models seem to memorize in-domain entity patterns instead of reasoning from the context. Our work also studies the effects of a few simple data augmentation methods to improve the robustness of NER models.
Diagnosing the First-Order Logical Reasoning Ability Through LogicNLI (2021)

Recently, language models (LMs) have achieved significant performance on many NLU tasks, which has spurred widespread interest for their possible applications in the scientific and social area. However, LMs have faced much criticism of whether they are truly capable of reasoning in NLU. In this work, we propose a diagnostic method for first-order logic (FOL) reasoning with a new proposed benchmark, LogicNLI. LogicNLI is an NLI-style dataset that effectively disentangles the target FOL reasoning from commonsense inference and can be used to diagnose LMs from four perspectives: accuracy, robustness, generalization, and interpretability. Experiments on BERT, RoBERTa, and XLNet, have uncovered the weaknesses of these LMs on FOL reasoning, which motivates future exploration to enhance the reasoning ability.