user: What would the C source look like for the assembly code provided here:

```asm
<get_annotation>:
  endbr64
  push   %rbp
  mov    %rsp,%rbp
  lea    -0x3d000(%rsp),%r11
L41:
  sub    $0x1000,%rsp
  orq    $0x0,(%rsp)
  cmp    %r11,%rsp
  jne    L41
  sub    $0x630,%rsp
  mov    %rdi,-0x3d628(%rbp)
  mov    %rsi,-0x3d630(%rbp)
  mov    %fs:0x28,%rax
  mov    %rax,-0x8(%rbp)
  xor    %eax,%eax
  mov    -0x3d630(%rbp),%rdx
  lea    -0x3d490(%rbp),%rax
  lea    D266(%rip),%rcx
  mov    %rcx,%rsi
  mov    %rax,%rdi
  mov    $0x0,%eax
  call   <sprintf@plt>
  lea    -0x3d490(%rbp),%rax
  mov    %rax,%rdi
  call   <system@plt>
  lea    -0x3d490(%rbp),%rax
  lea    D295(%rip),%rdx
  mov    %rdx,%rsi
  mov    %rax,%rdi
  mov    $0x0,%eax
  call   <sprintf@plt>
  lea    -0x3d490(%rbp),%rax
  mov    %rax,%rdi
  call   <system@plt>
  mov    -0x3d630(%rbp),%rax
  mov    %rax,%rsi
  lea    D319(%rip),%rax
  mov    %rax,%rdi
  mov    $0x0,%eax
  call   <printf@plt>
  movl   $0x1,-0x3d614(%rbp)
  movl   $0x0,-0x3d61c(%rbp)
  movl   $0x0,-0x3d618(%rbp)
  mov    -0x3d628(%rbp),%rdx
  lea    -0x3d490(%rbp),%rax
  lea    D423(%rip),%rcx
  mov    %rcx,%rsi
  mov    %rax,%rdi
  mov    $0x0,%eax
  call   <sprintf@plt>
  lea    -0x3d490(%rbp),%rax
  mov    %rax,%rdi
  call   <system@plt>
  mov    -0x3d628(%rbp),%rdx
  lea    -0x3d490(%rbp),%rax
  lea    D314(%rip),%rcx
  mov    %rcx,%rsi
  mov    %rax,%rdi
  mov    $0x0,%eax
  call   <sprintf@plt>
  lea    -0x3d490(%rbp),%rax
  mov    %rax,%rdi
  call   <system@plt>
  mov    -0x3d628(%rbp),%rdx
  lea    -0x3d490(%rbp),%rax
  lea    D116(%rip),%rcx
  mov    %rcx,%rsi
  mov    %rax,%rdi
  mov    $0x0,%eax
  call   <sprintf@plt>
  lea    -0x3d490(%rbp),%rax
  mov    %rax,%rdi
  call   <system@plt>
  mov    -0x3d628(%rbp),%rdx
  lea    -0x3d490(%rbp),%rax
  lea    D366(%rip),%rcx
  mov    %rcx,%rsi
  mov    %rax,%rdi
  mov    $0x0,%eax
  call   <sprintf@plt>
  lea    -0x3d490(%rbp),%rax
  mov    %rax,%rdi
  call   <system@plt>
  mov    -0x3d628(%rbp),%rdx
  lea    -0x3d490(%rbp),%rax
  lea    D294(%rip),%rcx
  mov    %rcx,%rsi
  mov    %rax,%rdi
  mov    $0x0,%eax
  call   <sprintf@plt>
  lea    -0x3d490(%rbp),%rax
  mov    %rax,%rdi
  call   <system@plt>
  mov    -0x3d628(%rbp),%rdx
  lea    -0x3d490(%rbp),%rax
  lea    D336(%rip),%rcx
  mov    %rcx,%rsi
  mov    %rax,%rdi
  mov    $0x0,%eax
  call   <sprintf@plt>
  lea    -0x3d490(%rbp),%rax
  mov    %rax,%rdi
  call   <system@plt>
  mov    -0x3d628(%rbp),%rdx
  lea    -0x3d490(%rbp),%rax
  lea    D430(%rip),%rcx
  mov    %rcx,%rsi
  mov    %rax,%rdi
  mov    $0x0,%eax
  call   <sprintf@plt>
  lea    -0x3d490(%rbp),%rax
  mov    %rax,%rdi
  call   <system@plt>
  mov    -0x3d628(%rbp),%rdx
  lea    -0xc360(%rbp),%rax
  lea    D28(%rip),%rcx
  mov    %rcx,%rsi
  mov    %rax,%rdi
  mov    $0x0,%eax
  call   <sprintf@plt>
  lea    -0xc360(%rbp),%rax
  lea    D305(%rip),%rdx
  mov    %rdx,%rsi
  mov    %rax,%rdi
  call   <fopen@plt>
  mov    %rax,-0x3d548(%rbp)
  cmpq   $0x0,-0x3d548(%rbp)
  jne    L334
  lea    D333(%rip),%rax
  mov    %rax,%rdi
  call   <puts@plt>
  mov    $0x1,%eax
  jmp    L191
L334:
  lea    D305(%rip),%rax
  mov    %rax,%rsi
  lea    D131(%rip),%rax
  mov    %rax,%rdi
  call   <fopen@plt>
  mov    %rax,-0x3d540(%rbp)
  cmpq   $0x0,-0x3d540(%rbp)
  jne    L281
  lea    D350(%rip),%rax
  mov    %rax,%rdi
  call   <puts@plt>
  mov    $0x1,%eax
  jmp    L191
L281:
  mov    -0x3d628(%rbp),%rdx
  lea    -0xc360(%rbp),%rax
  lea    D441(%rip),%rcx
  mov    %rcx,%rsi
  mov    %rax,%rdi
  mov    $0x0,%eax
  call   <sprintf@plt>
  lea    -0xc360(%rbp),%rax
  lea    D283(%rip),%rdx
  mov    %rdx,%rsi
  mov    %rax,%rdi
  call   <fopen@plt>
  mov    %rax,-0x3d538(%rbp)
  cmpq   $0x0,-0x3d538(%rbp)
  jne    L293
  lea    D58(%rip),%rax
  mov    %rax,%rdi
  call   <puts@plt>
L293:
  mov    -0x3d548(%rbp),%rdx
  lea    -0x3d0a0(%rbp),%rax
  mov    $0xc350,%esi
  mov    %rax,%rdi
  call   <fgets@plt>
  lea    -0x3d0a0(%rbp),%rdx
  lea    -0x24a00(%rbp),%rax
  mov    %rdx,%rsi
  mov    %rax,%rdi
  call   <strcpy@plt>
  lea    -0x3d610(%rbp),%rdx
  lea    -0x3d0a0(%rbp),%rax
  lea    D72(%rip),%rcx
  mov    %rcx,%rsi
  mov    %rax,%rdi
  call   <strtok_r@plt>
  mov    %rax,-0x3d600(%rbp)
  mov    -0x3d600(%rbp),%rax
  mov    $0x0,%edx
  mov    $0x0,%esi
  mov    %rax,%rdi
  call   <strtol@plt>
  mov    %rax,-0x3d598(%rbp)
  lea    -0x3d610(%rbp),%rax
  mov    %rax,%rdx
  lea    D72(%rip),%rax
  mov    %rax,%rsi
  mov    $0x0,%edi
  call   <strtok_r@plt>
  mov    %rax,-0x3d5f8(%rbp)
  mov    -0x3d5f8(%rbp),%rax
  mov    $0x0,%edx
  mov    $0x0,%esi
  mov    %rax,%rdi
  call   <strtol@plt>
  mov    %rax,-0x3d5b0(%rbp)
  lea    -0x3d610(%rbp),%rax
  mov    %rax,%rdx
  lea    D72(%rip),%rax
  mov    %rax,%rsi
  mov    $0x0,%edi
  call   <strtok_r@plt>
  mov    %rax,-0x3d5f0(%rbp)
  mov    -0x3d5f0(%rbp),%rax
  mov    $0x0,%edx
  mov    $0x0,%esi
  mov    %rax,%rdi
  call   <strtol@plt>
  mov    %rax,-0x3d580(%rbp)
  lea    -0x3d610(%rbp),%rax
  mov    %rax,%rdx
  lea    D72(%rip),%rax
  mov    %rax,%rsi
  mov    $0x0,%edi
  call   <strtok_r@plt>
  mov    %rax,-0x3d5e8(%rbp)
  lea    -0x3d610(%rbp),%rax
  mov    %rax,%rdx
  lea    D72(%rip),%rax
  mov    %rax,%rsi
  mov    $0x0,%edi
  call   <strtok_r@plt>
  mov    %rax,-0x3d5e0(%rbp)
  lea    -0x3d610(%rbp),%rax
  mov    %rax,%rdx
  lea    D72(%rip),%rax
  mov    %rax,%rsi
  mov    $0x0,%edi
  call   <strtok_r@plt>
  mov    %rax,-0x3d5d8(%rbp)
  mov    -0x3d540(%rbp),%rdx
  lea    -0x30d50(%rbp),%rax
  mov    $0x2710,%esi
  mov    %rax,%rdi
  call   <fgets@plt>
  lea    -0x30d50(%rbp),%rdx
  lea    -0x186b0(%rbp),%rax
  mov    %rdx,%rsi
  mov    %rax,%rdi
  call   <strcpy@plt>
  lea    -0x3d608(%rbp),%rdx
  lea    -0x30d50(%rbp),%rax
  lea    D193(%rip),%rcx
  mov    %rcx,%rsi
  mov    %rax,%rdi
  call   <strtok_r@plt>
  mov    %rax,-0x3d5d0(%rbp)
  mov    -0x3d600(%rbp),%rax
  mov    $0x0,%edx
  mov    $0x0,%esi
  mov    %rax,%rdi
  call   <strtol@plt>
  mov    %rax,-0x3d578(%rbp)
  lea    -0x3d608(%rbp),%rax
  mov    %rax,%rdx
  lea    D193(%rip),%rax
  mov    %rax,%rsi
  mov    $0x0,%edi
  call   <strtok_r@plt>
  mov    %rax,-0x3d5c8(%rbp)
  mov    -0x3d5c8(%rbp),%rax
  mov    $0x0,%edx
  mov    $0x0,%esi
  mov    %rax,%rdi
  call   <strtol@plt>
  mov    %rax,-0x3d5a8(%rbp)
  lea    -0x3d608(%rbp),%rax
  mov    %rax,%rdx
  lea    D193(%rip),%rax
  mov    %rax,%rsi
  mov    $0x0,%edi
  call   <strtok_r@plt>
  mov    %rax,-0x3d5c0(%rbp)
  mov    -0x3d5c0(%rbp),%rax
  mov    $0x0,%edx
  mov    $0x0,%esi
  mov    %rax,%rdi
  call   <strtol@plt>
  mov    %rax,-0x3d590(%rbp)
  lea    -0x3d608(%rbp),%rax
  mov    %rax,%rdx
  lea    D193(%rip),%rax
  mov    %rax,%rsi
  mov    $0x0,%edi
  call   <strtok_r@plt>
  mov    %rax,-0x3d5b8(%rbp)
  lea    -0x3d608(%rbp),%rax
  mov    %rax,%rdx
  lea    D72(%rip),%rax
  mov    %rax,%rsi
  mov    $0x0,%edi
  call   <strtok_r@plt>
  mov    %rax,-0x3d530(%rbp)
  mov    -0x3d5d0(%rbp),%rax
  mov    %rax,-0x3d528(%rbp)
  mov    -0x3d5c8(%rbp),%rax
  mov    %rax,-0x3d520(%rbp)
  mov    -0x3d5c0(%rbp),%rax
  mov    %rax,-0x3d518(%rbp)
  mov    -0x3d5b8(%rbp),%rax
  mov    %rax,-0x3d510(%rbp)
  mov    -0x3d530(%rbp),%rax
  mov    %rax,-0x3d508(%rbp)
  mov    -0x3d5b8(%rbp),%rdx
  lea    -0x3d500(%rbp),%rax
  mov    %rdx,%rsi
  mov    %rax,%rdi
  call   <strcpy@plt>
  mov    -0x3d578(%rbp),%rax
  mov    %rax,-0x3d570(%rbp)
  mov    -0x3d5a8(%rbp),%rax
  mov    %rax,-0x3d5a0(%rbp)
  mov    -0x3d590(%rbp),%rax
  mov    %rax,-0x3d588(%rbp)
  mov    -0x3d5b0(%rbp),%rax
  sub    -0x3d5a8(%rbp),%rax
  mov    %rax,-0x3d568(%rbp)
  mov    -0x3d5b0(%rbp),%rax
  sub    -0x3d590(%rbp),%rax
  mov    %rax,-0x3d560(%rbp)
  mov    -0x3d580(%rbp),%rax
  sub    -0x3d5a8(%rbp),%rax
  mov    %rax,-0x3d558(%rbp)
  mov    -0x3d580(%rbp),%rax
  sub    -0x3d590(%rbp),%rax
  mov    %rax,-0x3d550(%rbp)
  jmp    L258
L268:
  mov    -0x3d598(%rbp),%rax
  cmp    -0x3d578(%rbp),%rax
  jge    L88
  mov    -0x3d5b0(%rbp),%rax
  sub    -0x3d588(%rbp),%rax
  mov    %rax,%rdi
  call   <abs@plt>
  lea    0x1(%rax),%esi
  mov    -0x3d5e8(%rbp),%r8
  mov    -0x3d5f0(%rbp),%rdi
  mov    -0x3d5f8(%rbp),%rcx
  mov    -0x3d600(%rbp),%rdx
  mov    -0x3d538(%rbp),%rax
  sub    $0x8,%rsp
  push   %rsi
  lea    -0x3d500(%rbp),%rsi
  push   %rsi
  push   -0x3d588(%rbp)
  push   -0x3d5a0(%rbp)
  push   -0x3d570(%rbp)
  push   -0x3d5d8(%rbp)
  push   -0x3d5e0(%rbp)
  mov    %r8,%r9
  mov    %rdi,%r8
  lea    D45(%rip),%rsi
  mov    %rax,%rdi
  mov    $0x0,%eax
  call   <fprintf@plt>
  add    $0x40,%rsp
  movl   $0x1,-0x3d618(%rbp)
  jmp    L184
L88:
  mov    -0x3d598(%rbp),%rax
  cmp    -0x3d578(%rbp),%rax
  jle    L170
  movl   $0x2,-0x3d618(%rbp)
  jmp    L184
L170:
  cmpq   $0x0,-0x3d568(%rbp)
  jle    L312
  cmpq   $0x0,-0x3d560(%rbp)
  jle    L312
  cmpq   $0x0,-0x3d558(%rbp)
  jle    L312
  cmpq   $0x0,-0x3d550(%rbp)
  jle    L312
  mov    -0x3d5d0(%rbp),%rax
  mov    %rax,-0x3d528(%rbp)
  mov    -0x3d5c8(%rbp),%rax
  mov    %rax,-0x3d520(%rbp)
  mov    -0x3d5c0(%rbp),%rax
  mov    %rax,-0x3d518(%rbp)
  mov    -0x3d5b8(%rbp),%rax
  mov    %rax,-0x3d510(%rbp)
  mov    -0x3d5b8(%rbp),%rdx
  lea    -0x3d500(%rbp),%rax
  mov    %rdx,%rsi
  mov    %rax,%rdi
  call   <strcpy@plt>
  mov    -0x3d578(%rbp),%rax
  mov    %rax,-0x3d570(%rbp)
  mov    -0x3d5a8(%rbp),%rax
  mov    %rax,-0x3d5a0(%rbp)
  mov    -0x3d590(%rbp),%rax
  mov    %rax,-0x3d588(%rbp)
  movl   $0x2,-0x3d618(%rbp)
  jmp    L184
L312:
  cmpq   $0x0,-0x3d568(%rbp)
  jns    L119
  cmpq   $0x0,-0x3d560(%rbp)
  jns    L119
  cmpq   $0x0,-0x3d558(%rbp)
  jns    L119
  cmpq   $0x0,-0x3d550(%rbp)
  jns    L119
  mov    -0x3d5a8(%rbp),%rax
  sub    -0x3d580(%rbp),%rax
  mov    %rax,%rdx
  mov    -0x3d5b0(%rbp),%rax
  sub    -0x3d588(%rbp),%rax
  cmp    %rax,%rdx
  jge    L299
  mov    -0x3d5a8(%rbp),%rax
  sub    -0x3d580(%rbp),%rax
  mov    %rax,%rdi
  call   <abs@plt>
  lea    0x1(%rax),%esi
  mov    -0x3d5e8(%rbp),%r8
  mov    -0x3d5f0(%rbp),%rdi
  mov    -0x3d5f8(%rbp),%rcx
  mov    -0x3d600(%rbp),%rdx
  mov    -0x3d538(%rbp),%rax
  sub    $0x8,%rsp
  push   %rsi
  push   -0x3d5b8(%rbp)
  push   -0x3d5c0(%rbp)
  push   -0x3d5c8(%rbp)
  push   -0x3d5d0(%rbp)
  push   -0x3d5d8(%rbp)
  push   -0x3d5e0(%rbp)
  mov    %r8,%r9
  mov    %rdi,%r8
  lea    D259(%rip),%rsi
  mov    %rax,%rdi
  mov    $0x0,%eax
  call   <fprintf@plt>
  add    $0x40,%rsp
  jmp    L259
L299:
  mov    -0x3d570(%rbp),%rax
  cmp    -0x3d578(%rbp),%rax
  jne    L322
  mov    -0x3d5b0(%rbp),%rax
  sub    -0x3d588(%rbp),%rax
  mov    %rax,%rdi
  call   <abs@plt>
  lea    0x1(%rax),%esi
  mov    -0x3d5e8(%rbp),%r8
  mov    -0x3d5f0(%rbp),%rdi
  mov    -0x3d5f8(%rbp),%rcx
  mov    -0x3d600(%rbp),%rdx
  mov    -0x3d538(%rbp),%rax
  sub    $0x8,%rsp
  push   %rsi
  lea    -0x3d500(%rbp),%rsi
  push   %rsi
  push   -0x3d588(%rbp)
  push   -0x3d5a0(%rbp)
  push   -0x3d5d0(%rbp)
  push   -0x3d5d8(%rbp)
  push   -0x3d5e0(%rbp)
  mov    %r8,%r9
  mov    %rdi,%r8
  lea    D67(%rip),%rsi
  mov    %rax,%rdi
  mov    $0x0,%eax
  call   <fprintf@plt>
  add    $0x40,%rsp
  jmp    L259
L322:
  mov    -0x3d5a8(%rbp),%rax
  sub    -0x3d580(%rbp),%rax
  mov    %rax,%rdi
  call   <abs@plt>
  lea    0x1(%rax),%esi
  mov    -0x3d5e8(%rbp),%r8
  mov    -0x3d5f0(%rbp),%rdi
  mov    -0x3d5f8(%rbp),%rcx
  mov    -0x3d600(%rbp),%rdx
  mov    -0x3d538(%rbp),%rax
  sub    $0x8,%rsp
  push   %rsi
  push   -0x3d5b8(%rbp)
  push   -0x3d5c0(%rbp)
  push   -0x3d5c8(%rbp)
  push   -0x3d5d0(%rbp)
  push   -0x3d5d8(%rbp)
  push   -0x3d5e0(%rbp)
  mov    %r8,%r9
  mov    %rdi,%r8
  lea    D259(%rip),%rsi
  mov    %rax,%rdi
  mov    $0x0,%eax
  call   <fprintf@plt>
  add    $0x40,%rsp
L259:
  movl   $0x1,-0x3d618(%rbp)
  jmp    L184
L119:
  addl   $0x1,-0x3d61c(%rbp)
  mov    -0x3d5e8(%rbp),%rdi
  mov    -0x3d5f0(%rbp),%rsi
  mov    -0x3d5f8(%rbp),%rcx
  mov    -0x3d600(%rbp),%rdx
  mov    -0x3d538(%rbp),%rax
  push   -0x3d5b8(%rbp)
  push   -0x3d5c0(%rbp)
  push   -0x3d5c8(%rbp)
  push   -0x3d5d0(%rbp)
  push   -0x3d5d8(%rbp)
  push   -0x3d5e0(%rbp)
  mov    %rdi,%r9
  mov    %rsi,%r8
  lea    D445(%rip),%rsi
  mov    %rax,%rdi
  mov    $0x0,%eax
  call   <fprintf@plt>
  add    $0x30,%rsp
  movl   $0x1,-0x3d618(%rbp)
L184:
  cmpl   $0x1,-0x3d618(%rbp)
  je     L52
  cmpl   $0x2,-0x3d618(%rbp)
  je     L175
  jmp    L187
L52:
  mov    -0x3d548(%rbp),%rdx
  lea    -0x3d0a0(%rbp),%rax
  mov    $0xc350,%esi
  mov    %rax,%rdi
  call   <fgets@plt>
  test   %rax,%rax
  je     L169
  lea    -0x3d0a0(%rbp),%rdx
  lea    -0x24a00(%rbp),%rax
  mov    %rdx,%rsi
  mov    %rax,%rdi
  call   <strcpy@plt>
  lea    -0x3d610(%rbp),%rdx
  lea    -0x3d0a0(%rbp),%rax
  lea    D72(%rip),%rcx
  mov    %rcx,%rsi
  mov    %rax,%rdi
  call   <strtok_r@plt>
  mov    %rax,-0x3d600(%rbp)
  mov    -0x3d600(%rbp),%rax
  mov    $0x0,%edx
  mov    $0x0,%esi
  mov    %rax,%rdi
  call   <strtol@plt>
  mov    %rax,-0x3d598(%rbp)
  lea    -0x3d610(%rbp),%rax
  mov    %rax,%rdx
  lea    D72(%rip),%rax
  mov    %rax,%rsi
  mov    $0x0,%edi
  call   <strtok_r@plt>
  mov    %rax,-0x3d5f8(%rbp)
  mov    -0x3d5f8(%rbp),%rax
  mov    $0x0,%edx
  mov    $0x0,%esi
  mov    %rax,%rdi
  call   <strtol@plt>
  mov    %rax,-0x3d5b0(%rbp)
  lea    -0x3d610(%rbp),%rax
  mov    %rax,%rdx
  lea    D72(%rip),%rax
  mov    %rax,%rsi
  mov    $0x0,%edi
  call   <strtok_r@plt>
  mov    %rax,-0x3d5f0(%rbp)
  mov    -0x3d5f0(%rbp),%rax
  mov    $0x0,%edx
  mov    $0x0,%esi
  mov    %rax,%rdi
  call   <strtol@plt>
  mov    %rax,-0x3d580(%rbp)
  lea    -0x3d610(%rbp),%rax
  mov    %rax,%rdx
  lea    D72(%rip),%rax
  mov    %rax,%rsi
  mov    $0x0,%edi
  call   <strtok_r@plt>
  mov    %rax,-0x3d5e8(%rbp)
  lea    -0x3d610(%rbp),%rax
  mov    %rax,%rdx
  lea    D72(%rip),%rax
  mov    %rax,%rsi
  mov    $0x0,%edi
  call   <strtok_r@plt>
  mov    %rax,-0x3d5e0(%rbp)
  lea    -0x3d610(%rbp),%rax
  mov    %rax,%rdx
  lea    D72(%rip),%rax
  mov    %rax,%rsi
  mov    $0x0,%edi
  call   <strtok_r@plt>
  mov    %rax,-0x3d5d8(%rbp)
  jmp    L187
L169:
  movl   $0x0,-0x3d614(%rbp)
  jmp    L187
L175:
  mov    -0x3d540(%rbp),%rdx
  lea    -0x30d50(%rbp),%rax
  mov    $0x2710,%esi
  mov    %rax,%rdi
  call   <fgets@plt>
  test   %rax,%rax
  je     L46
  lea    -0x30d50(%rbp),%rdx
  lea    -0x186b0(%rbp),%rax
  mov    %rdx,%rsi
  mov    %rax,%rdi
  call   <strcpy@plt>
  lea    -0x3d608(%rbp),%rdx
  lea    -0x30d50(%rbp),%rax
  lea    D193(%rip),%rcx
  mov    %rcx,%rsi
  mov    %rax,%rdi
  call   <strtok_r@plt>
  mov    %rax,-0x3d5d0(%rbp)
  mov    -0x3d5d0(%rbp),%rax
  mov    $0x0,%edx
  mov    $0x0,%esi
  mov    %rax,%rdi
  call   <strtol@plt>
  mov    %rax,-0x3d578(%rbp)
  lea    -0x3d608(%rbp),%rax
  mov    %rax,%rdx
  lea    D193(%rip),%rax
  mov    %rax,%rsi
  mov    $0x0,%edi
  call   <strtok_r@plt>
  mov    %rax,-0x3d5c8(%rbp)
  mov    -0x3d5c8(%rbp),%rax
  mov    $0x0,%edx
  mov    $0x0,%esi
  mov    %rax,%rdi
  call   <strtol@plt>
  mov    %rax,-0x3d5a8(%rbp)
  lea    -0x3d608(%rbp),%rax
  mov    %rax,%rdx
  lea    D193(%rip),%rax
  mov    %rax,%rsi
  mov    $0x0,%edi
  call   <strtok_r@plt>
  mov    %rax,-0x3d5c0(%rbp)
  mov    -0x3d5c0(%rbp),%rax
  mov    $0x0,%edx
  mov    $0x0,%esi
  mov    %rax,%rdi
  call   <strtol@plt>
  mov    %rax,-0x3d590(%rbp)
  lea    -0x3d608(%rbp),%rax
  mov    %rax,%rdx
  lea    D72(%rip),%rax
  mov    %rax,%rsi
  mov    $0x0,%edi
  call   <strtok_r@plt>
  mov    %rax,-0x3d5b8(%rbp)
  lea    -0x3d608(%rbp),%rax
  mov    %rax,%rdx
  lea    D72(%rip),%rax
  mov    %rax,%rsi
  mov    $0x0,%edi
  call   <strtok_r@plt>
  mov    %rax,-0x3d530(%rbp)
  jmp    L234
L46:
  movl   $0x0,-0x3d614(%rbp)
L234:
  nop
L187:
  mov    -0x3d5b0(%rbp),%rax
  sub    -0x3d5a8(%rbp),%rax
  mov    %rax,-0x3d568(%rbp)
  mov    -0x3d5b0(%rbp),%rax
  sub    -0x3d590(%rbp),%rax
  mov    %rax,-0x3d560(%rbp)
  mov    -0x3d580(%rbp),%rax
  sub    -0x3d5a8(%rbp),%rax
  mov    %rax,-0x3d558(%rbp)
  mov    -0x3d580(%rbp),%rax
  sub    -0x3d590(%rbp),%rax
  mov    %rax,-0x3d550(%rbp)
L258:
  cmpl   $0x0,-0x3d614(%rbp)
  jg     L268
  mov    -0x3d548(%rbp),%rax
  mov    %rax,%rdi
  call   <fclose@plt>
  mov    -0x3d540(%rbp),%rax
  mov    %rax,%rdi
  call   <fclose@plt>
  mov    $0x0,%eax
L191:
  mov    -0x8(%rbp),%rdx
  sub    %fs:0x28,%rdx
  je     L118
  call   <__stack_chk_fail@plt>
L118:
  leave
  ret
```

tool_calls: name: read_data
arguments: tag: D266
type: string
name: read_data
arguments: tag: D295
type: string
name: read_data
arguments: tag: D319
type: string
name: read_data
arguments: tag: D423
type: string
name: read_data
arguments: tag: D314
type: string
name: read_data
arguments: tag: D116
type: string
name: read_data
arguments: tag: D366
type: string
name: read_data
arguments: tag: D294
type: string
name: read_data
arguments: tag: D336
type: string
name: read_data
arguments: tag: D430
type: string
name: read_data
arguments: tag: D28
type: string
name: read_data
arguments: tag: D305
type: string
name: read_data
arguments: tag: D333
type: string
name: read_data
arguments: tag: D131
type: string
name: read_data
arguments: tag: D350
type: string
name: read_data
arguments: tag: D441
type: string
name: read_data
arguments: tag: D283
type: string
name: read_data
arguments: tag: D58
type: string
name: read_data
arguments: tag: D72
type: string
name: read_data
arguments: tag: D193
type: string
name: read_data
arguments: tag: D45
type: string
name: read_data
arguments: tag: D259
type: string
name: read_data
arguments: tag: D67
type: string
name: read_data
arguments: tag: D445
type: string

tool: D266: awk -F "\t" '$3 == "gene" { print $1 "\t" $4 "\t" $5 "\t" $9 }' %s > tmp.gtf

tool: D295: sed -i 's/^chr//g' tmp.gtf

tool: D319: we have a gtf file with the name of %s


tool: D423: sed -i 's/^chr//g' %s.tmp2

tool: D314: sed -i 's/^X/23/g' %s.tmp2

tool: D116: sed -i 's/^Y/24/g' %s.tmp2

tool: D366: sed -i 's/^M/25/g' %s.tmp2

tool: D294: sed -i 's/^MT/25/g' %s.tmp2

tool: D336: sort -k1,1n -k2,2n %s.tmp2 > tmp.tmp2

tool: D430: mv tmp.tmp2 %s.tmp2

tool: D28: %s.tmp2

tool: D305: r

tool: D333: Problem opening variant file

tool: D131: tmp.gtf

tool: D350: Problem opening vcf file

tool: D441: %s.tmp3

tool: D283: w

tool: D58: Problem opening output file

tool: D72: 	


tool: D193: 	

tool: D45: %s	%s	%s	%s	%s	%s	%d	%d	%d	%s	%d


tool: D259: %s	%s	%s	%s	%s	%s	%s	%s	%s	%s	%d


tool: D67: %s	%s	%s	%s	%s	%s	%s	%d	%d	%s	%d


tool: D445: %s	%s	%s	%s	%s	%s	%s	%s	%s	%s	0


assistant: ```c
int get_annotation(char *input_filename, char *gtf) {
  char system_command[1000];
  sprintf(system_command, "awk -F \"\\t\" '$3 == \"gene\" { print $1 \"\\t\" $4 \"\\t\" $5 \"\\t\" $9 }' %s > tmp.gtf", gtf);
  system(system_command);
  sprintf(system_command, "sed -i 's/^chr//g' tmp.gtf");
  system(system_command);
  printf("we have a gtf file with the name of %s\n", gtf);
  char varstr[50000];
  char vcfstr[50000];
  char varstr1[50000];
  char vcfstr1[50000];
  char tempstring[50000];
  char col1[100];
  char col2[100];
  char col3[100];
  char col4[100];
  char col5[100];
  char *pvarcol1;
  char *pvarcol2;
  char *pvarcol3;
  char *pvarcol4;
  char *pvarcol5;
  char *pvarcol6;
  char *pvcfcol1_1;
  char *pvcfcol2_2;
  char *pvcfcol3_3;
  char *pvcfcol4_4;
  char *pvcfcol5_5;
  char *pvcfcol1;
  char *pvcfcol2;
  char *pvcfcol3;
  char *pvcfcol4;
  char *pvcfcol5;
  char *end_str;
  char *end_str2;
  char *commentptr;
  FILE *vcffp;
  FILE *varfp;
  FILE *outfp;
  long i;
  long j;
  long j_1;
  long k;
  long l;
  long l_1;
  long m;
  long n;
  long n_1;
  long v1;
  long v2;
  long v3;
  long v4;
  int zero_count;
  int pflag;
  int wflag;
  wflag = 1;
  zero_count = 0;
  pflag = 0;
  sprintf(system_command, "sed -i 's/^chr//g' %s.tmp2", input_filename);
  system(system_command);
  sprintf(system_command, "sed -i 's/^X/23/g' %s.tmp2", input_filename);
  system(system_command);
  sprintf(system_command, "sed -i 's/^Y/24/g' %s.tmp2", input_filename);
  system(system_command);
  sprintf(system_command, "sed -i 's/^M/25/g' %s.tmp2", input_filename);
  system(system_command);
  sprintf(system_command, "sed -i 's/^MT/25/g' %s.tmp2", input_filename);
  system(system_command);
  sprintf(system_command, "sort -k1,1n -k2,2n %s.tmp2 > tmp.tmp2", input_filename);
  system(system_command);
  sprintf(system_command, "mv tmp.tmp2 %s.tmp2", input_filename);
  system(system_command);
  sprintf(tempstring, "%s.tmp2", input_filename);
  varfp = fopen(tempstring, "r");
  if (varfp == NULL) {
    printf("Problem opening variant file\n");
    return 1;
  }
  vcffp = fopen("tmp.gtf", "r");
  if (vcffp == NULL) {
    printf("Problem opening vcf file\n");
    return 1;
  }
  sprintf(tempstring, "%s.tmp3", input_filename);
  outfp = fopen(tempstring, "w");
  if (outfp == NULL) {
    printf("Problem opening output file\n");
  }
  fgets(varstr, 50000, varfp);
  strcpy(varstr1, varstr);
  pvarcol1 = strtok_r(varstr, "\t\n", &end_str);
  k = strtol(pvarcol1, NULL, 0);
  pvarcol2 = strtok_r(NULL, "\t\n", &end_str);
  i = strtol(pvarcol2, NULL, 0);
  pvarcol3 = strtok_r(NULL, "\t\n", &end_str);
  m = strtol(pvarcol3, NULL, 0);
  pvarcol4 = strtok_r(NULL, "\t\n", &end_str);
  pvarcol5 = strtok_r(NULL, "\t\n", &end_str);
  pvarcol6 = strtok_r(NULL, "\t\n", &end_str);
  fgets(vcfstr, 10000, vcffp);
  strcpy(vcfstr1, vcfstr);
  pvcfcol1 = strtok_r(vcfstr, "\t", &end_str2);
  n = strtol(pvarcol1, NULL, 0);
  pvcfcol2 = strtok_r(NULL, "\t", &end_str2);
  j = strtol(pvcfcol2, NULL, 0);
  pvcfcol3 = strtok_r(NULL, "\t", &end_str2);
  l = strtol(pvcfcol3, NULL, 0);
  pvcfcol4 = strtok_r(NULL, "\t", &end_str2);
  pvcfcol5 = strtok_r(NULL, "\t\n", &end_str2);
  pvcfcol1_1 = pvcfcol1;
  pvcfcol2_2 = pvcfcol2;
  pvcfcol3_3 = pvcfcol3;
  pvcfcol4_4 = pvcfcol4;
  pvcfcol5_5 = pvcfcol5;
  strcpy(col1, pvcfcol4);
  n_1 = n;
  j_1 = j;
  l_1 = l;
  v1 = i - j;
  v2 = i - l;
  v3 = m - j;
  v4 = m - l;
  while (wflag > 0) {
    if (k < n) {
      fprintf(outfp, "%s\t%s\t%s\t%s\t%s\t%s\t%d\t%d\t%d\t%s\t%d\n", pvarcol1, pvarcol2, pvarcol3, pvarcol4, pvarcol5, pvarcol6, n_1, j_1, l_1, col1, abs((i - l_1)) + 1);
      pflag = 1;
    } else if (k > n) {
      pflag = 2;
    } else {
      if ((v1 > 0) && (v2 > 0) && (v3 > 0) && (v4 > 0)) {
        pvcfcol1_1 = pvcfcol1;
        pvcfcol2_2 = pvcfcol2;
        pvcfcol3_3 = pvcfcol3;
        pvcfcol4_4 = pvcfcol4;
        strcpy(col1, pvcfcol4);
        n_1 = n;
        j_1 = j;
        l_1 = l;
        pflag = 2;
      } else if ((v1 < 0) && (v2 < 0) && (v3 < 0) && (v4 < 0)) {
        if ((j - m) < (i - l_1)) {
          fprintf(outfp, "%s\t%s\t%s\t%s\t%s\t%s\t%s\t%s\t%s\t%s\t%d\n", pvarcol1, pvarcol2, pvarcol3, pvarcol4, pvarcol5, pvarcol6, pvcfcol1, pvcfcol2, pvcfcol3, pvcfcol4, abs((j - m)) + 1);
        } else {
          if (n_1 == n) {
            fprintf(outfp, "%s\t%s\t%s\t%s\t%s\t%s\t%s\t%d\t%d\t%s\t%d\n", pvarcol1, pvarcol2, pvarcol3, pvarcol4, pvarcol5, pvarcol6, pvcfcol1, j_1, l_1, col1, abs((i - l_1)) + 1);
          } else {
            fprintf(outfp, "%s\t%s\t%s\t%s\t%s\t%s\t%s\t%s\t%s\t%s\t%d\n", pvarcol1, pvarcol2, pvarcol3, pvarcol4, pvarcol5, pvarcol6, pvcfcol1, pvcfcol2, pvcfcol3, pvcfcol4, abs((j - m)) + 1);
          }
        }
        pflag = 1;
      } else {
        zero_count = zero_count + 1;
        fprintf(outfp, "%s\t%s\t%s\t%s\t%s\t%s\t%s\t%s\t%s\t%s\t0\n", pvarcol1, pvarcol2, pvarcol3, pvarcol4, pvarcol5, pvarcol6, pvcfcol1, pvcfcol2, pvcfcol3, pvcfcol4);
        pflag = 1;
      }
    }
    switch (pflag) {
    case 1:
      if (fgets(varstr, 50000, varfp) != NULL) {
        strcpy(varstr1, varstr);
        pvarcol1 = strtok_r(varstr, "\t\n", &end_str);
        k = strtol(pvarcol1, NULL, 0);
        pvarcol2 = strtok_r(NULL, "\t\n", &end_str);
        i = strtol(pvarcol2, NULL, 0);
        pvarcol3 = strtok_r(NULL, "\t\n", &end_str);
        m = strtol(pvarcol3, NULL, 0);
        pvarcol4 = strtok_r(NULL, "\t\n", &end_str);
        pvarcol5 = strtok_r(NULL, "\t\n", &end_str);
        pvarcol6 = strtok_r(NULL, "\t\n", &end_str);
      } else {
        wflag = 0;
      };
      break;
    case 2:
      if (fgets(vcfstr, 10000, vcffp) != NULL) {
        strcpy(vcfstr1, vcfstr);
        pvcfcol1 = strtok_r(vcfstr, "\t", &end_str2);
        n = strtol(pvcfcol1, NULL, 0);
        pvcfcol2 = strtok_r(NULL, "\t", &end_str2);
        j = strtol(pvcfcol2, NULL, 0);
        pvcfcol3 = strtok_r(NULL, "\t", &end_str2);
        l = strtol(pvcfcol3, NULL, 0);
        pvcfcol4 = strtok_r(NULL, "\t\n", &end_str2);
        pvcfcol5 = strtok_r(NULL, "\t\n", &end_str2);
      } else {
        wflag = 0;
      }
      break;
    }
    v1 = i - j;
    v2 = i - l;
    v3 = m - j;
    v4 = m - l;
  }
  fclose(varfp);
  fclose(vcffp);
  return 0;
}
```