[Redmi Note 2 Android Development] jajk:
[MENTION=5997739]dsjiffry[/MENTION] O.K, this is what has been done to your image:

Removed offending code responsible for overwriting LMK settings:

init.mt6795.rc
on property:sys.boot_completed=1
write /sys/module/lowmemorykiller/parameters/enable_adaptive_lmk "1"
write /sys/module/lowmemorykiller/parameters/vmpressure_file_min "93312"
write /proc/sys/vm/extra_free_kbytes "81920"
write /sys/module/lowmemorykiller/parameters/adj "0,2,3,7,9,15"
write /sys/module/lowmemorykiller/parameters/minfree "18432,23040,27648,32256,55296,80640"

Added 0644 perms and more complete range of HPS settings:

# HMP CPU hotplug strategy
chown system system /proc/hps/rush_boost_enabled
chmod 0664 /proc/hps/rush_boost_enabled
chown system system /proc/hps/rush_boost_threshold
chmod 0664 /proc/hps/rush_boost_threshold
chown system system /proc/hps/input_boost_enabled
chmod 0664 /proc/hps/input_boost_enabled
chown system system /proc/hps/input_boost_cpu_num
chmod 0664 /proc/hps/input_boost_cpu_num
chown system system /proc/hps/num_base_perf_serv
chmod 0664 /proc/hps/num_base_perf_serv
chown system system /proc/hps/num_limit_power_serv
chmod 0664 /proc/hps/num_limit_power_serv
chown system system /proc/hps/num_limit_ultra_power_saving
chmod 0664 /proc/hps/num_limit_ultra_power_saving
chown system system /proc/hps/num_limit_low_battery
chmod 0664 /proc/hps/num_limit_low_battery
chown system system /proc/hps/num_limit_thermal
chmod 0664 /proc/hps/num_limit_thermal
chown system system /proc/hps/down_threshold
chmod 0664 /proc/hps/down_threshold
chown system system /proc/hps/up_threshold
chmod 0664 /proc/hps/up_threshold

Removed offending code responsible for overwriting Interactive Gov settings:

init.project.rc
write /sys/devices/system/cpu/cpufreq/interactive/above_hispeed_delay "25000 1300000:50000"
write /sys/devices/system/cpu/cpufreq/interactive/go_hispeed_load "90"
write /sys/devices/system/cpu/cpufreq/interactive/target_loads "85 1170000:90 1300000:80"
write /sys/devices/system/cpu/cpufreq/interactive/min_sample_time "50000"
write /sys/devices/system/cpu/cpufreq/interactive/timer_rate "25000"
write /sys/devices/system/cpu/cpufreq/interactive/hispeed_freq "1300000"
write /sys/devices/system/cpu/cpufreq/interactive/io_is_busy "1"

This may be an HTC replacement for Perfserv? Changed perms to 0644 so these can be altered in init.d script.

# init PnPMgr node
chmod 664 /sys/power/pnpmgr/apps/media_mode
chown media system /sys/power/pnpmgr/apps/media_mode
chown media /sys/power/pnpmgr/audio/audio_playing
chown system /sys/power/pnpmgr/apps/activity_trigger
chown system /sys/power/pnpmgr/apps/non_activity_trigger
chmod 664 /sys/power/perflock
chown system /sys/power/perflock
chmod 664 /sys/power/launch_event
chown system /sys/power/launch_event
chmod 664 /sys/power/powersave
chown system /sys/power/powersave
chmod 664 /sys/power/cpufreq_ceiling
chown system /sys/power/cpufreq_ceiling
chmod 664 /sys/power/cpunum_floor
chown system /sys/power/cpunum_floor
chmod 664 /sys/power/cpunum_ceiling
chown system /sys/power/cpunum_ceiling
chmod 664 /sys/power/pnpmgr/hotplug/touch_boost
chown system /sys/power/pnpmgr/hotplug/touch_boost
chmod 664 /sys/power/pnpmgr/hotplug/touch_boost_duration
chown system /sys/power/pnpmgr/hotplug/touch_boost_duration
chmod 664 /sys/power/pnpmgr/long_duration_touch_boost
chown system /sys/power/pnpmgr/long_duration_touch_boost
chmod 664 /sys/power/pnpmgr/long_duration_touch_boost_duration
chown system /sys/power/pnpmgr/long_duration_touch_boost_duration

HTC may have a different boost system in the form of PnPMgr. I have enabled the setting of this but have no idea what effect each line will have - take a look at the default value in each file and see if it makes sense to you. I can't see your phone or the effect these settings have so you are on your own with that.

You can add lines to the end of /system/etc/partition_permission.sh to act as substitute for init.d if you want something that will stick between reboots rather than have Kernel Adiutor running.

https://drive.google.com/open?id=0BwdRTuyj12_ydjJFSmE4S2hqcG8