[Xperia Z5 Android Development] birger.r:
I had the same issue and tried with kernel beta 5 and SuperSU 2.74 beta on E5823_32.2.A.0.224_1298-7258_R7C. Worked for me.

It appears I am having the same issue as .corrupt. - Threema is not starting. :(

06-25 11:32:26.460 2574 4549 I ActivityManager: START u0 {act=android.intent.action.MAIN cat=[android.intent.category.LAUNCHER] flg=0x10200000 cmp=ch.threema.app/.activities.MainActivity bnds=[535,777][707,1013]} from uid 10239 on display 0
06-25 11:32:26.502 2574 3908 V BoostFramework: BoostFramework() : mPerf = com.qualcomm.qti.Performance@d11160f
06-25 11:32:26.503 2574 3908 I ActivityManager: Start proc 11686:ch.threema.app/u0a285 for activity ch.threema.app/.activities.MainActivity
06-25 11:32:26.552 11686 11686 I GMPM : App measurement is starting up, version: 8487
06-25 11:32:26.553 11686 11686 I GMPM : To enable debug logging run: adb shell setprop log.tag.GMPM VERBOSE
06-25 11:32:26.561 11686 11686 E GMPM : GoogleService failed to initialize, status: 10, Missing an expected resource: 'R.string.google_app_id' forinitializing Google services. Possible causes are missing google-services.json or com.google.gms.google-services gradle plugin.
06-25 11:32:26.561 11686 11686 E GMPM : Scheduler not set. Not logging error/warn.
06-25 11:32:26.570 11686 11699 E GMPM : Uploading is not possible. App measurement disabled
06-25 11:32:26.629 11686 11686 I Database: JNI_OnLoad called
06-25 11:32:26.629 11686 11686 I Database: JNI_OnLoad register methods
06-25 11:32:26.642 11686 11686 F libc : Fatal signal 11 (SIGSEGV), code 1, fault addr 0x11fffffc in tid 11686 (ch.threema.app)
06-25 11:32:26.744 1663 1663 D clmlib : Got activities:0x0000000E
06-25 11:32:26.745 1663 1663 F DEBUG : *** *** *** *** *** *** *** *** *** *** *** *** *** *** *** ***
06-25 11:32:26.745 1663 1663 F DEBUG : UUID: 2f5ac725-99d6-4b5e-9a7b-2a0cf5a3f8df
06-25 11:32:26.745 1663 1663 F DEBUG : Build fingerprint: 'Sony/E5823/E5823:6.0.1/32.2.A.0.224/456768306:user/release-keys'
06-25 11:32:26.745 1663 1663 F DEBUG : Revision: '0'
06-25 11:32:26.745 1663 1663 F DEBUG : ABI: 'arm'
06-25 11:32:26.745 1663 1663 F DEBUG : pid: 11686, tid: 11686, name: ch.threema.app >>> ch.threema.app <<<
06-25 11:32:26.745 1663 1663 F DEBUG : signal 11 (SIGSEGV), code 1 (SEGV_MAPERR), fault addr 0x11fffffc
06-25 11:32:26.758 1663 1663 F DEBUG : r0 12000004 r1 00000400 r2 00000000 r3 ef280d29
06-25 11:32:26.758 1663 1663 F DEBUG : r4 001961a8 r5 12000004 r6 00000400 r7 ab612268
06-25 11:32:26.758 1663 1663 F DEBUG : r8 00000000 r9 ffc43a30 sl ffc439f4 fp 00000043
06-25 11:32:26.758 1663 1663 F DEBUG : ip 00000066 sp ffc43968 lr ef280e8f pc ef280d2a cpsr 20070030
06-25 11:32:26.760 1663 1663 F DEBUG :
06-25 11:32:26.760 1663 1663 F DEBUG : backtrace:
06-25 11:32:26.761 1663 1663 F DEBUG : #00 pc 00055d2a /data/app/ch.threema.app-1/lib/arm/libsqlcipher_android.so
06-25 11:32:26.761 1663 1663 F DEBUG : #01 pc 00055e8d /data/app/ch.threema.app-1/lib/arm/libsqlcipher_android.so
06-25 11:32:26.761 1663 1663 F DEBUG : #02 pc 0005cbb1 /data/app/ch.threema.app-1/lib/arm/libsqlcipher_android.so
06-25 11:32:26.761 1663 1663 F DEBUG : #03 pc 0005dc4b /data/app/ch.threema.app-1/lib/arm/libsqlcipher_android.so
06-25 11:32:26.761 1663 1663 F DEBUG : #04 pc 00063101 /data/app/ch.threema.app-1/lib/arm/libsqlcipher_android.so
06-25 11:32:26.761 1663 1663 F DEBUG : #05 pc 0006517b /data/app/ch.threema.app-1/lib/arm/libsqlcipher_android.so
06-25 11:32:26.761 1663 1663 F DEBUG : #06 pc 00065ddb /data/app/ch.threema.app-1/lib/arm/libsqlcipher_android.so
06-25 11:32:26.761 1663 1663 F DEBUG : #07 pc 0000707b /data/app/ch.threema.app-1/lib/arm/libdatabase_sqlcipher.so (sqlcipher::native_key_char(_JNIEnv*, _jobject*, _jcharArray*)+174)
06-25 11:32:26.761 1663 1663 F DEBUG : #08 pc 00b3ab85 /data/app/ch.threema.app-1/oat/arm/base.odex (offset 0x5fc000)
06-25 11:32:26.873 1663 1663 F DEBUG :
06-25 11:32:26.873 1663 1663 F DEBUG : Tombstone written to: /data/tombstones/tombstone_06
06-25 11:32:26.873 1663 1663 E DEBUG : AM write failed: Broken pipe
06-25 11:32:26.873 2574 2635 I BootReceiver: Copying /data/tombstones/tombstone_06 to DropBox (SYSTEM_TOMBSTONE)
06-25 11:32:26.873 1663 1663 D : private_mode
06-25 11:32:26.873 2574 11703 D ActivityManager: New dropbox entry: ch.threema.app, data_app_native_crash, 50198061-27ed-4229-a03e-6823f59eefe0
06-25 11:32:26.874 1663 1663 D : Parent: Waiting for end of a child
06-25 11:32:26.874 2574 11703 W ActivityManager: Force finishing activity ch.threema.app/.activities.MainActivity
06-25 11:32:26.874 11705 11705 D : Child: Start
06-25 11:32:26.875 11705 11705 D : /system/bin/nativedumper,-c,11686,ch.threema.app,11,0
06-25 11:32:26.887 11705 11705 D nativedumper:main: Native dumper invoked.
06-25 11:32:26.887 11705 11705 D nativedumper:main: Reading the activities for this pid from clm.
06-25 11:32:26.887 11705 11705 D clmlib : Got activities:0x0000000E
06-25 11:32:26.887 11705 11705 I nativedumper:main: Process pid 11686(ch.threema.app ch.threema.app) died by signal - 11.
06-25 11:32:26.887 11705 11705 I nativedumper:main: start collecting core dump.
06-25 11:32:26.889 11705 11705 W nativedumper:main: Could not read dump destination path - -95
06-25 11:32:26.889 11705 11705 I nativedumper:main: Adding ramdump targets from xml to queue.
06-25 11:32:26.890 11705 11705 E nativedumper:FW: parser.c(74): Failed to find expected node from: //mem_desc[@path]
06-25 11:32:26.890 11705 11705 D nativedumper:main: get_info:path:/proc/rdtags/rdinfo_ts6, output: 11686 2f5ac725-99d6-4b5e-9a7b-2a0cf5a3f8df /data/tombstones/tombstone_06 bytes:73 in-buf-size:4146
06-25 11:32:26.890 11705 11705 D nativedumper:main: Found tag for pid 11686
06-25 11:32:26.890 11705 11705 D nativedumper:main: Tombstone path:/data/tombstones/tombstone_06 UUID:2f5ac725-99d6-4b5e-9a7b-2a0cf5a3f8df PID:11686
06-25 11:32:26.890 11705 11705 I nativedumper:main: Adding package information into queue.
06-25 11:32:26.911 11705 11705 E nativedumper:FW: utils.c(248): mkdir (/data/crashdata) failed. File exists
06-25 11:32:26.912 11705 11705 E nativedumper:FW: ramdump_framework.c(315): fp is NULL
06-25 11:32:26.912 11705 11705 E nativedumper:FW: ramdump_framework.c(495): Read-only file system
06-25 11:32:26.912 11705 11705 E nativedumper:FW: ramdump_framework.c(524): Not Supported Arch type
06-25 11:32:26.912 11705 11705 E nativedumper:FW: ramdump_framework.c(605): Invalid argument
06-25 11:32:27.047 11705 11705 E libtlcore: tlcore_header.c(998): Tlcore header is incomplete
06-25 11:32:27.047 11705 11705 E nativedumper:FW: ramdump_framework.c(1525): Invalid argument
06-25 11:32:27.048 11705 11705 D nativedumper:main: core dump collected
06-25 11:32:27.048 11705 11705 I nativedumper:main: Native crash dump collection done.
06-25 11:32:27.049 1663 1663 D : Parent: End of waiting a child
06-25 11:32:27.065 1706 1706 I Zygote : Process 11686 exited due to signal (11)
06-25 11:32:27.140 1787 1787 I MSM-irqbalance: Decided to move IRQ115 from CPU2 to CPU1
06-25 11:32:27.179 2574 11703 I WindowManager: Screenshot max retries 4 of Token{315a158 ActivityRecord{7b4163b u0 ch.threema.app/.activities.MainAct
ivity t180 f}} appWin=Window{64c1f6e u0 Starting ch.threema.app} drawState=4
06-25 11:32:27.181 2574 11703 W ActivityManager: Exception thrown during pause
06-25 11:32:27.181 2574 11703 W ActivityManager: android.os.DeadObjectException
06-25 11:32:27.181 2574 11703 W ActivityManager: at android.os.BinderProxy.transactNative(Native Method)
06-25 11:32:27.181 2574 11703 W ActivityManager: at android.os.BinderProxy.transact(Binder.java:503)
06-25 11:32:27.181 2574 11703 W ActivityManager: at android.app.ApplicationThreadProxy.schedulePauseActivity(ApplicationThreadNative.java:732)
06-25 11:32:27.181 2574 11703 W ActivityManager: at com.android.server.am.ActivityStack.startPausingLocked(ActivityStack.java:887)
06-25 11:32:27.181 2574 11703 W ActivityManager: at com.android.server.am.ActivityStack.finishActivityLocked(ActivityStack.java:2939)
06-25 11:32:27.181 2574 11703 W ActivityManager: at com.android.server.am.ActivityStack.finishTopRunningActivityLocked(ActivityStack.java:2795)
06-25 11:32:27.181 2574 11703 W ActivityManager: at com.android.server.am.ActivityStackSupervisor.finishTopRunningActivityLocked(ActivityStackSupervisor.java:2810)
06-25 11:32:27.181 2574 11703 W ActivityManager: at com.android.server.am.ActivityManagerService.handleAppCrashLocked(ActivityManagerService.java:12594)
06-25 11:32:27.181 2574 11703 W ActivityManager: at com.android.server.am.ActivityManagerService.makeAppCrashingLocked(ActivityManagerService.java:12490)
06-25 11:32:27.181 2574 11703 W ActivityManager: at com.android.server.am.ActivityManagerService.crashApplication(ActivityManagerService.java:13296)
06-25 11:32:27.181 2574 11703 W ActivityManager: at com.android.server.am.ActivityManagerService.handleApplicationCrashInner(ActivityManagerService.java:12692)
06-25 11:32:27.181 2574 11703 W ActivityManager: at com.android.server.am.NativeCrashListener$NativeCrashReporter.run(NativeCrashListener.java:86)
06-25 11:32:27.185 1636 1636 E lowmemorykiller: Error opening /proc/11686/oom_score_adj; errno=2
06-25 11:32:27.208 2574 4540 I ActivityManager: Process ch.threema.app (pid 11686) has died

I am coming from a stock rom on a new device - this is the first root kernel I tried. I wiped the phone to have a clean start - which did not solve the problem.

As a side note: A friend of mine is running an Android 6.x on a rooted Nexus phone and has a similar issue. I'll try to figure out a few more details, but it appears this issue is at least not unique on this kernel.