[Android Apps and Games] kobik77:
Here you go, thanks for the help :)

ROOT= /cygdrive/e/Share/ApG/ApGPackages/ap/
TOOL= /cygdrive/e/Share/ApG/ApGPackages/ap//patch_tools.tgz
ROM= /cygdrive/e/Share/ApG/rascarlo_maguro_ota_2012-11-01.zip
ROMX= E:\Share\ApG\RASCAR~2.ZIP

### verify tools ###
/cygdrive/e/Share/ApG/ApGPackages/cygwin/bin/patch
/cygdrive/e/Share/ApG/ApGPackages/cygwin/bin/tar
/cygdrive/e/Share/ApG/ApGPackages/Java/bin/jar
/cygdrive/e/Share/ApG/ApGPackages/Java/bin/java
/cygdrive/e/Share/ApG/ApGPackages/cygwin/bin/cpio

### verify ROM ###
### running ./auto_patcher /cygdrive/e/Share/ApG/rascarlo_maguro_ota_2012-11-01.zip pd2.0
PATH= /cygdrive/e/Share/ApG/ApGPackages/ap/tmp20121103213555:/cygdrive/e/Share/ApG/ApGPackages/Java/bin:/cygdrive/e/Share/ApG/ApGPackages/cygwin/bin:/cygdrive/e/Share/ApG/ApGPackages/cygwin/usr/sbin

### unzip patch tools ###

### unzip patch patches ###

### probe rom type ###
#### Standard Build Query ####
# VER= Auto-Patcher v2.3.5
# OS= cygwin 32bit
# VID= 4.1.2
# PID= pd2.0
# MID= JZO54K
# RID= aosp-jb
# ANDR= jellybean
# BDID= 20121101
# DID= maguro
# BID= 20121016
### DELETE FILES=
### COPY FILES= system/app/Mms.apk system/media/PDroid.jpeg
### JAR FILES= system/framework/framework.jar system/framework/core.jar system/framework/services.jar
### APK FILES=
### IMG FILES= boot.img
### TXT FILES=

### unzip rom ###

### create updater script ###

... using Clockworkmod installer ...
# generated updater-script
mount("ext4", "EMMC", "/dev/block/platform/omap/omap_hsmmc.0/by-name/system", "/system");
package_extract_dir("system", "/system");
set_perm_recursive(0, 0, 0755, 0644, "/system");
set_perm_recursive(0, 2000, 0755, 0755, "/system/bin");
set_perm(0, 3003, 02750, "/system/bin/netcfg");
set_perm(0, 3004, 02755, "/system/bin/ping");
set_perm(0, 2000, 06750, "/system/bin/run-as");
set_perm_recursive(1002, 1002, 0755, 0440, "/system/etc/bluetooth");
set_perm(0, 0, 0755, "/system/etc/bluetooth");
set_perm(1000, 1000, 0640, "/system/etc/bluetooth/auto_pairing.conf");
set_perm(3002, 3002, 0444, "/system/etc/bluetooth/blacklist.conf");
set_perm(1002, 1002, 0440, "/system/etc/dbus.conf");
set_perm(1014, 2000, 0550, "/system/etc/dhcpcd/dhcpcd-run-hooks");
set_perm(0, 2000, 0550, "/system/etc/init.goldfish.sh");
set_perm_recursive(0, 0, 0755, 0555, "/system/etc/ppp");
set_perm(0, 2000, 0755, "/system/vendor");
set_perm_recursive(0, 2000, 0755, 0755, "/system/vendor/bin");
set_perm_recursive(0, 2000, 0755, 0644, "/system/vendor/etc");
set_perm(0, 0, 0644, "/system/vendor/etc/sirfgps.conf");
set_perm(0, 2000, 0755, "/system/vendor/firmware");
set_perm(0, 2000, 0755, "/system/vendor/lib");
set_perm(0, 2000, 0755, "/system/vendor/lib/egl");
set_perm(0, 2000, 0755, "/system/vendor/lib/hw");
set_perm_recursive(0, 2000, 0755, 0644, "/system/vendor/pittpatt");
set_perm(0, 0, 0644, "/system/vendor/pittpatt/models/detection/multi_pose_face_landmark_detectors.7/left_eye-y0-yi45-p0-pi45-r0-ri20.lg_32/full_model.bin");
set_perm(0, 0, 0644, "/system/vendor/pittpatt/models/detection/multi_pose_face_landmark_detectors.7/nose_base-y0-yi45-p0-pi45-r0-ri20.lg_32/full_model.bin");
set_perm(0, 0, 0644, "/system/vendor/pittpatt/models/detection/multi_pose_face_landmark_detectors.7/right_eye-y0-yi45-p0-pi45-r0-ri20.lg_32-2/full_model.bin");
set_perm(0, 0, 0644, "/system/vendor/pittpatt/models/detection/yaw_roll_face_detectors.6/head-y0-yi45-p0-pi45-r0-ri30.4a-v24/full_model.bin");
set_perm(0, 0, 0644, "/system/vendor/pittpatt/models/detection/yaw_roll_face_detectors.6/head-y0-yi45-p0-pi45-rn30-ri30.5-v24/full_model.bin");
set_perm(0, 0, 0644, "/system/vendor/pittpatt/models/detection/yaw_roll_face_detectors.6/head-y0-yi45-p0-pi45-rp30-ri30.5-v24/full_model.bin");
set_perm(0, 0, 0644, "/system/vendor/pittpatt/models/recognition/face.face.y0-y0-22-b-N/full_model.bin");
set_perm_recursive(0, 2000, 0755, 0644, "/system/vendor/res");
set_perm(0, 0, 0644, "/system/vendor/res/images/dock/dock.png");
set_perm_recursive(0, 2000, 0755, 0755, "/system/xbin");
set_perm(0, 0, 06755, "/system/xbin/su");
unmount("/system");
package_extract_file("boot.img", "/dev/block/platform/omap/omap_hsmmc.0/by-name/boot");

### create restore.zip ###

### decompile system files ###

... decompile framework.jar ...

... extract preloaded-classes ...
inflated: preloaded-classes

... decompile core.jar ...

... decompile services.jar ...

### unpacking boot.img ###
BOARD_KERNEL_CMDLINE
BOARD_KERNEL_BASE 80000000
BOARD_PAGE_SIZE 00000800
1056 blocks

### copy patch pd2.0/jellybean/aosp-jb/20121016 ###

... copying system/app/Mms.apk ...

... overwriting system/app/Mms.apk from pd2.0 ...
`patches/pd2.0/jellybean/aosp-jb/20121016/system/app/Mms.apk' -> `./system/app/Mms.apk'

... copying system/media/PDroid.jpeg ...
`patches/pd2.0/jellybean/aosp-jb/20121016/system/media/PDroid.jpeg' -> `./system/media/PDroid.jpeg'

### jar patch pd2.0/jellybean/aosp-jb/20121016 ###

... apply framework.patch ...
1 out of 5 hunks FAILED -- saving rejects to file smali/com/android/internal/telephony/gsm/GsmServiceStateTracker.smali.rej

!!! PATCHING FAILED FOR com/android/internal/telephony/gsm/GsmServiceStateTracker.smali !!!
!!! patch error for com/android/internal/telephony/gsm/GsmServiceStateTracker.smali !!!
askconsent final = yes: for com/android/internal/telephony/gsm/GsmServiceStateTracker.smali

... replace com/android/internal/telephony/gsm/GsmServiceStateTracker.smali ...
`patches/pd2.0/jellybean/provisionals/system/framework/framework.jar.out/smali/com/android/internal/telephony/gsm/GsmServiceStateTracker.smali' -> `tmp/system/framework/framework.jar.out/smali/com/android/internal/telephony/gsm/GsmServiceStateTracker.smali'
GARBAGE= tmp/system/framework/framework.jar.out/smali/android/provider/Settings$Secure.smali.orig tmp/system/framework/framework.jar.out/smali/com/android/internal/telephony/PhoneFactory.smali.orig
GARBAGE=

... apply core.patch ...
GARBAGE=
GARBAGE=

... apply services.patch ...
GARBAGE=
GARBAGE=

### img patch pd2.0/jellybean/aosp-jb/20121016 ###

### rebuild jar ###

... rebuild framework.jar ...
adding: classes.dex(in = 8602784) (out= 3487964)(deflated 59%)
adding: preloaded-classes(in = 84385) (out= 14490)(deflated 82%)

... rebuild core.jar ...
adding: classes.dex(in = 2510640) (out= 1045232)(deflated 58%)

... rebuild services.jar ...
adding: classes.dex(in = 1735844) (out= 781459)(deflated 54%)

### rebuild img ###

### rebuild boot.img ###

... rebuilding ramdisk ...

... composing boot.img ...
cmdline = no_console_suspend=1 console=null
pagesize = 2048
base = 80000000

... rebuilding boot.img ...

### create update.zip ###
added manifest
adding: boot.img(in = 4470784) (out= 4448267)(deflated 0%)
adding: system/framework/framework.jar(in = 3503039) (out= 3480290)(deflated 0%)
adding: system/framework/core.jar(in = 1049470) (out= 1042632)(deflated 0%)
adding: system/framework/services.jar(in = 781918) (out= 780776)(deflated 0%)
adding: system/app/Mms.apk(in = 3134809) (out= 2400567)(deflated 23%)
adding: system/media/PDroid.jpeg(in = 26898) (out= 25744)(deflated 4%)
ignoring entry META-INF/
adding: META-INF/com/(in = 0) (out= 0)(stored 0%)
adding: META-INF/com/google/(in = 0) (out= 0)(stored 0%)
adding: META-INF/com/google/android/(in = 0) (out= 0)(stored 0%)
adding: META-INF/com/google/android/update-binary(in = 221760) (out= 142465)(deflated 35%)
adding: META-INF/com/google/android/updater-script(in = 2709) (out= 589)(deflated 78%)