[Android Software Development] DaOldMan:
Well sure, here goes

I: Decoding AndroidManifest.xml with resources...
I: Loading resource table from file: C:\Users\Thomas\apktool\framework\1.apk
I: Loaded.
I: Regular manifest package...
I: Decoding file-resources...
I: Loading resource table from file: C:\Users\Thomas\apktool\framework\2.apk
I: Loaded.
I: Decoding values */* XMLs...
I: Done.
I: Copying assets and libs...
I: Checking whether sources has changed...
I: Smaling...
I: Checking whether resources has changed...
I: Building resources...
C:\Apk_Manager_ICS\other\..\projects\ClockPackage.apk\res\layout-sw320dp\alarm_alert.xml:23: error: Error: No resource found that matches the given name (at 'style' with value '@style/TextStyle_AlertComment').
C:\Apk_Manager_ICS\other\..\projects\ClockPackage.apk\res\layout-sw320dp-hdpi\alarm_alert.xml:25: error: Error: No resource found that matches the given name (at 'style' with value '@style/TextStyle_AlertComment').
C:\Apk_Manager_ICS\other\..\projects\ClockPackage.apk\res\layout-sw320dp-land\alarm_alert.xml:23: error: Error: No resource found that matches the given name (at 'style' with value '@style/TextStyle_AlertComment').
C:\Apk_Manager_ICS\other\..\projects\ClockPackage.apk\res\layout-sw320dp-land-hdpi\alarm_alert.xml:25: error: Error: No resource found that matches the given name (at 'style' with value '@style/TextStyle_AlertComment').
C:\Apk_Manager_ICS\other\..\projects\ClockPackage.apk\res\layout-sw320dp\alarm_alert_snooze.xml:23: error: Error: No resource found that matches the given name (at 'style' with value '@style/TextStyle_AlertComment').
C:\Apk_Manager_ICS\other\..\projects\ClockPackage.apk\res\layout-sw320dp-hdpi\alarm_alert_snooze.xml:25: error: Error: No resource found that matches the given name (at 'style' with value '@style/TextStyle_AlertComment').
C:\Apk_Manager_ICS\other\..\projects\ClockPackage.apk\res\layout-sw320dp-land\alarm_alert_snooze.xml:23: error: Error: No resource found that matches the given name (at 'style' with value '@style/TextStyle_AlertComment').
C:\Apk_Manager_ICS\other\..\projects\ClockPackage.apk\res\layout-sw320dp-land-hdpi\alarm_alert_snooze.xml:25: error: Error: No resource found that matches the given name (at 'style' with value '@style/TextStyle_AlertComment').
C:\Apk_Manager_ICS\other\..\projects\ClockPackage.apk\res\layout-sw320dp\alarm_briefing_alert.xml:17: error: Error: No resource found that matches the given name (at 'style' with value '@style/TextStyle_AlertComment').
C:\Apk_Manager_ICS\other\..\projects\ClockPackage.apk\res\layout-sw320dp\alarm_briefing_alert.xml:18: error: Error: No resource found that matches the given name (at 'style' with value '@style/TextStyle_AlertComment').
C:\Apk_Manager_ICS\other\..\projects\ClockPackage.apk\res\layout-sw320dp-hdpi\alarm_briefing_alert.xml:17: error: Error: No resource found that matches the given name (at 'style' with value '@style/TextStyle_AlertComment').
C:\Apk_Manager_ICS\other\..\projects\ClockPackage.apk\res\layout-sw320dp-hdpi\alarm_briefing_alert.xml:18: error: Error: No resource found that matches the given name (at 'style' with value '@style/TextStyle_AlertComment').
C:\Apk_Manager_ICS\other\..\projects\ClockPackage.apk\res\layout-sw320dp-land\alarm_briefing_alert.xml:17: error: Error: No resource found that matches the given name (at 'style' with value '@style/TextStyle_AlertComment').
C:\Apk_Manager_ICS\other\..\projects\ClockPackage.apk\res\layout-sw320dp-land\alarm_briefing_alert.xml:18: error: Error: No resource found that matches the given name (at 'style' with value '@style/TextStyle_AlertComment').
C:\Apk_Manager_ICS\other\..\projects\ClockPackage.apk\res\layout-sw320dp-land-hdpi\alarm_briefing_alert.xml:17: error: Error: No resource found that matches the given name (at 'style' with value '@style/TextStyle_AlertComment').
C:\Apk_Manager_ICS\other\..\projects\ClockPackage.apk\res\layout-sw320dp-land-hdpi\alarm_briefing_alert.xml:18: error: Error: No resource found that matches the given name (at 'style' with value '@style/TextStyle_AlertComment').
C:\Apk_Manager_ICS\other\..\projects\ClockPackage.apk\res\layout\alarm_detail_actionbar.xml:4: error: Error: No resource found that matches the given name (at 'style' with value '@style/TextAppearance.ActionMenuText').
C:\Apk_Manager_ICS\other\..\projects\ClockPackage.apk\res\layout\alarm_detail_actionbar.xml:6: error: Error: No resource found that matches the given name (at 'style' with value '@style/TextAppearance.ActionMenuText').
C:\Apk_Manager_ICS\other\..\projects\ClockPackage.apk\res\layout\alarm_detail_actionbar.xml:11: error: Error: No resource found that matches the given name (at 'style' with value '@style/TextAppearance.ActionMenuText').
C:\Apk_Manager_ICS\other\..\projects\ClockPackage.apk\res\layout\alarm_detail_actionbar.xml:13: error: Error: No resource found that matches the given name (at 'style' with value '@style/TextAppearance.ActionMenuText').
C:\Apk_Manager_ICS\other\..\projects\ClockPackage.apk\res\layout\alarm_detail_actionbar.xml:18: error: Error: No resource found that matches the given name (at 'style' with value '@style/TextAppearance.ActionMenuText').
C:\Apk_Manager_ICS\other\..\projects\ClockPackage.apk\res\layout\alarm_detail_actionbar.xml:20: error: Error: No resource found that matches the given name (at 'style' with value '@style/TextAppearance.ActionMenuText').
C:\Apk_Manager_ICS\other\..\projects\ClockPackage.apk\res\layout\alarm_detail_actionbar.xml:26: error: Error: No resource found that matches the given name (at 'style' with value '@style/TextAppearance.ActionMenuTitle').
C:\Apk_Manager_ICS\other\..\projects\ClockPackage.apk\res\layout-sw320dp\alarm_smart_alert.xml:25: error: Error: No resource found that matches the given name (at 'style' with value '@style/TextStyle_AlertComment').
C:\Apk_Manager_ICS\other\..\projects\ClockPackage.apk\res\layout-sw320dp-hdpi\alarm_smart_alert.xml:25: error: Error: No resource found that matches the given name (at 'style' with value '@style/TextStyle_AlertComment').
C:\Apk_Manager_ICS\other\..\projects\ClockPackage.apk\res\layout-sw320dp-land\alarm_smart_alert.xml:23: error: Error: No resource found that matches the given name (at 'style' with value '@style/TextStyle_AlertComment').
C:\Apk_Manager_ICS\other\..\projects\ClockPackage.apk\res\layout-sw320dp-land-hdpi\alarm_smart_alert.xml:25: error: Error: No resource found that matches the given name (at 'style' with value '@style/TextStyle_AlertComment').
C:\Apk_Manager_ICS\other\..\projects\ClockPackage.apk\res\layout\alarm_smart_alert_snooze.xml:23: error: Error: No resource found that matches the given name (at 'style' with value '@style/TextStyle_AlertComment').
C:\Apk_Manager_ICS\other\..\projects\ClockPackage.apk\res\layout-sw320dp\alarm_smart_alert_snooze.xml:23: error: Error: No resource found that matches the given name (at 'style' with value '@style/TextStyle_AlertComment').
C:\Apk_Manager_ICS\other\..\projects\ClockPackage.apk\res\layout-sw320dp-hdpi\alarm_smart_alert_snooze.xml:25: error: Error: No resource found that matches the given name (at 'style' with value '@style/TextStyle_AlertComment').
C:\Apk_Manager_ICS\other\..\projects\ClockPackage.apk\res\layout-sw320dp-land\alarm_smart_alert_snooze.xml:23: error: Error: No resource found that matches the given name (at 'style' with value '@style/TextStyle_AlertComment').
C:\Apk_Manager_ICS\other\..\projects\ClockPackage.apk\res\layout-sw320dp-land-hdpi\alarm_smart_alert_snooze.xml:25: error: Error: No resource found that matches the given name (at 'style' with value '@style/TextStyle_AlertComment').
C:\Apk_Manager_ICS\other\..\projects\ClockPackage.apk\res\layout\mw_alarm_detail.xml:61: error: Error: No resource found that matches the given name (at 'style' with value '@style/AlarmSpinner').
C:\Apk_Manager_ICS\other\..\projects\ClockPackage.apk\res\layout\mw_alarm_detail.xml:119: error: Error: No resource found that matches the given name (at 'style' with value '@style/AlarmSpinner').
Exception in thread "main" brut.androlib.AndrolibException: brut.androlib.AndrolibException: brut.common.BrutException: could not exec command: [aapt, p, --min-sdk-version, 14, --target-sdk-version, 16, -F, C:\Users\Thomas\AppData\Local\Temp\APKTOOL4837116455808390351.tmp, -I, C:\Users\Thomas\apktool\framework\1.apk, -I, C:\Users\Thomas\apktool\framework\2.apk, -S, C:\Apk_Manager_ICS\other\..\projects\ClockPackage.apk\res, -M, C:\Apk_Manager_ICS\other\..\projects\ClockPackage.apk\AndroidManifest.xml]
at brut.androlib.Androlib.buildResourcesFull(Androlib.java:355)
at brut.androlib.Androlib.buildResources(Androlib.java:280)
at brut.androlib.Androlib.build(Androlib.java:203)
at brut.androlib.Androlib.build(Androlib.java:176)
at brut.apktool.Main.cmdBuild(Main.java:214)
at brut.apktool.Main.main(Main.java:74)
Caused by: brut.androlib.AndrolibException: brut.common.BrutException: could not exec command: [aapt, p, --min-sdk-version, 14, --target-sdk-version, 16, -F, C:\Users\Thomas\AppData\Local\Temp\APKTOOL4837116455808390351.tmp, -I, C:\Users\Thomas\apktool\framework\1.apk, -I, C:\Users\Thomas\apktool\framework\2.apk, -S, C:\Apk_Manager_ICS\other\..\projects\ClockPackage.apk\res, -M, C:\Apk_Manager_ICS\other\..\projects\ClockPackage.apk\AndroidManifest.xml]
at brut.androlib.res.AndrolibResources.aaptPackage(AndrolibResources.java:335)
at brut.androlib.Androlib.buildResourcesFull(Androlib.java:333)
... 5 more
Caused by: brut.common.BrutException: could not exec command: [aapt, p, --min-sdk-version, 14, --target-sdk-version, 16, -F, C:\Users\Thomas\AppData\Local\Temp\APKTOOL4837116455808390351.tmp, -I, C:\Users\Thomas\apktool\framework\1.apk, -I, C:\Users\Thomas\apktool\framework\2.apk, -S, C:\Apk_Manager_ICS\other\..\projects\ClockPackage.apk\res, -M, C:\Apk_Manager_ICS\other\..\projects\ClockPackage.apk\AndroidManifest.xml]
at brut.util.OS.exec(OS.java:89)
at brut.androlib.res.AndrolibResources.aaptPackage(AndrolibResources.java:333)
... 6 more

The file can be downloaded from here:

https://dl.dropbox.com/u/15209525/ClockPackage.apk

We think that decompiling skips some files maybe, and when you try to compile the definitions are missing. There are many more files like this one.

Many thanks,

Thomas