[Android Software/Hacking General [Developers Only]] Teemoo:
hi, thanks for auto-patcher! , I have been using it for quite a time.

using this ROM got this error:

ROOT= /home/vb/2
TOOL= /home/vb/2/patch_tools.tgz
ROM= /home/vb/2/rom.zip
ROMX= /home/vb/2/rom.zip

### verify tools ###
/usr/bin/patch
/bin/tar
/usr/bin/jar
/usr/bin/java
/bin/cpio

### verify ROM ###
### running ./auto_patcher rom.zip pd2.0
PATH= /home/vb/2/tmp20121103204423:/usr/lib/lightdm/lightdm:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games

### unzip patch tools ###

### unzip patch patches ###

### probe rom type ###
#### Standard Build Query ####
# VER= Auto-Patcher v2.3.5
# OS= linux-gnu 32bit
# VID= 4.1.2
# PID= pd2.0
# MID=
# RID= cm
# ANDR= jellybean
# BDID= 20121030
# DID=
# BID= 20121016
### DELETE FILES=
### COPY FILES= system/app/Mms.apk system/media/PDroid.jpeg
### JAR FILES= system/framework/framework.jar system/framework/core.jar system/framework/services.jar
### APK FILES=
### IMG FILES=
### TXT FILES=

### unzip rom ###

### create updater script ###

... using Aroma installer ...
# generated updater-script
run_program("/sbin/busybox", "mount", "/system");
package_extract_dir("system", "/system");
set_perm_recursive(0, 0, 0755, 0644, "/system");
set_perm_recursive(0, 2000, 0755, 0755, "/system/bin");
set_perm(0, 3003, 02750, "/system/bin/netcfg");
set_perm(0, 3004, 02755, "/system/bin/ping");
set_perm(0, 2000, 06750, "/system/bin/run-as");
set_perm_recursive(1002, 1002, 0755, 0440, "/system/etc/bluetooth");
set_perm(0, 0, 0755, "/system/etc/bluetooth");
set_perm(1000, 1000, 0640, "/system/etc/bluetooth/auto_pairing.conf");
set_perm(3002, 3002, 0444, "/system/etc/bluetooth/blacklist.conf");
set_perm(1002, 1002, 0440, "/system/etc/dbus.conf");
set_perm(1014, 2000, 0550, "/system/etc/dhcpcd/dhcpcd-run-hooks");
set_perm_recursive(0, 2000, 0755, 0644, "/system/vendor");
set_perm(0, 2000, 0755, "/system/vendor/firmware");
set_perm(0, 2000, 0755, "/system/vendor/lib");
set_perm_recursive(0, 2000, 0755, 0755, "/system/xbin");
set_perm(0, 0, 06755, "/system/xbin/hcitool");
set_perm(0, 0, 06755, "/system/xbin/librank");
set_perm(0, 0, 06755, "/system/xbin/procmem");
set_perm(0, 0, 06755, "/system/xbin/procrank");
set_perm(0, 0, 06755, "/system/xbin/tcpdump");
set_perm(0, 0, 06755, "/system/xbin/busybox");
set_perm(0, 0, 06755, "/system/xbin/su");
set_perm_recursive(0, 2000, 0755, 0750, "/system/etc/init.d");
set_perm(0, 0, 0755, "/system/etc/init.d");
set_perm_recursive(0, 1001, 0755, 0775, "/system/etc/ppp");
set_perm(0, 0, 04755, "/system/bin/pppd");
set_perm(0, 0, 0777, "/system/etc/init.d/97ppp");
unmount("/system");

### create restore.zip ###

### decompile system files ###

... decompile framework.jar ...

... extract preloaded-classes ...
inflated: preloaded-classes

... decompile core.jar ...

... decompile services.jar ...

### copy patch pd2.0/jellybean/cm/20121016 ###

... copying system/app/Mms.apk ...

... overwriting system/app/Mms.apk from pd2.0 ...
`patches/pd2.0/jellybean/cm/20121016/system/app/Mms.apk' -> `./system/app/Mms.apk'

... copying system/media/PDroid.jpeg ...
`patches/pd2.0/jellybean/cm/20121016/system/media/PDroid.jpeg' -> `./system/media/PDroid.jpeg'

### jar patch pd2.0/jellybean/cm/20121016 ###

... apply framework.patch ...
2 out of 5 hunks FAILED -- saving rejects to file smali/com/android/internal/telephony/gsm/GsmServiceStateTracker.smali.rej

!!! PATCHING FAILED FOR com/android/internal/telephony/gsm/GsmServiceStateTracker.smali !!!
!!! patch error for com/android/internal/telephony/gsm/GsmServiceStateTracker.smali !!!
askconsent final = no: for com/android/internal/telephony/gsm/GsmServiceStateTracker.smali

and when I aggreed to replace the premade copy, my phone couldn't get signal but booted fine. and I think pdroid 2 worked fine too. It would be great IF anybody knows how to solve this. Thanks.