[Eee Pad Transformer Q&A, Help & Troubleshooting] gee one:
Here is a list of the patches. All of these files have to be stock or else the update will fail. There are other ways to install the updates. One of the devs will probably put together a zip file that will install it.

I tried modifying the OTA and flashing through the stock recovery, but it does crypto key checks and I'm not familiar with the key format. It will flash through some version of CWM (don't forget to mount /system first), but the blob won't flash because the staging partition isn't mounted, but this can be done manually in several ways.

system/app/AWS.odex
system/app/ApplicationsProvider.apk
system/app/ApplicationsProvider.odex
system/app/AsusReader.apk
system/app/AsusReader.odex
system/app/AsusSetupWizard.odex
system/app/Bluetooth.apk
system/app/Bluetooth.odex
system/app/BooksTablet.odex
system/app/Browser.apk
system/app/Browser.odex
system/app/CMClient.apk
system/app/CMClient.odex
system/app/Calculator.apk
system/app/Calculator.odex
system/app/Calendar.apk
system/app/Calendar.odex
system/app/CalendarProvider.apk
system/app/CalendarProvider.odex
system/app/Camera.odex
system/app/CertInstaller.apk
system/app/CertInstaller.odex
system/app/ChromeBookmarksSyncAdapter.odex
system/app/Contacts.apk
system/app/Contacts.odex
system/app/ContactsProvider.apk
system/app/ContactsProvider.odex
system/app/DLNA.apk
system/app/DLNA.odex
system/app/DMClient.apk
system/app/DMClient.odex
system/app/DefaultContainerService.apk
system/app/DefaultContainerService.odex
system/app/DeskClock.odex
system/app/Dictionary.odex
system/app/DownloadProvider.apk
system/app/DownloadProvider.odex
system/app/DownloadProviderUi.apk
system/app/DownloadProviderUi.odex
system/app/DrmProvider.apk
system/app/DrmProvider.odex
system/app/Email.odex
system/app/EmailWidget.apk
system/app/EmailWidget.odex
system/app/Exchange.odex
system/app/FacebookPoster.odex
system/app/FileManager.apk
system/app/FileManager.odex
system/app/Finsky.odex
system/app/GalleryNew3DGoogle.odex
system/app/Gmail.odex
system/app/GoogleBackupTransport.odex
system/app/GoogleCalendarSyncAdapter.odex
system/app/GoogleContactsSyncAdapter.odex
system/app/GoogleFeedback.odex
system/app/GoogleLoginService.odex
system/app/GooglePartnerSetup.odex
system/app/GoogleQuickSearchBox.odex
system/app/GoogleServicesFramework.odex
system/app/HTMLViewer.apk
system/app/HTMLViewer.odex
system/app/HoloSpiralWallpaper.apk
system/app/HoloSpiralWallpaper.odex
system/app/Keyboard.odex
system/app/Kindle-OEM.odex
system/app/LatinImeGoogle.odex
system/app/Launcher2.apk
system/app/Launcher2.odex
system/app/Layar.odex
system/app/LiveWallpapersPicker.apk
system/app/LiveWallpapersPicker.odex
system/app/MEar.odex
system/app/Maps.odex
system/app/MarketUpdater.odex
system/app/MediaProvider.apk
system/app/MediaProvider.odex
system/app/MediaUploader.odex
system/app/ModemUpdateService.odex
system/app/Music2.odex
system/app/MyCloud.odex
system/app/MyGazine.odex
system/app/MyWater.odex
system/app/NVIDIATegraZone.odex
system/app/NetworkLocation.odex
system/app/OneTimeInitializer.odex
system/app/PCSyncLauncher.odex
system/app/PRAndroid.odex
system/app/PackageInstaller.apk
system/app/PackageInstaller.odex
system/app/Phone.apk
system/app/Phone.odex
system/app/PicoTts.odex
system/app/PixWe.odex
system/app/PolarisOffice.apk
system/app/PolarisOffice.odex
system/app/Screenshot.apk
system/app/Screenshot.odex
system/app/Settings.apk
system/app/Settings.odex
system/app/SettingsProvider.apk
system/app/SettingsProvider.odex
system/app/SetupWizard.odex
system/app/SoundRecorder.apk
system/app/SoundRecorder.odex
system/app/StrAsus.odex
system/app/Street.odex
system/app/SystemUI.apk
system/app/SystemUI.odex
system/app/Talk.odex
system/app/TelephonyProvider.apk
system/app/TelephonyProvider.odex
system/app/TtsService.apk
system/app/TtsService.odex
system/app/UpdateLauncher.apk
system/app/UpdateLauncher.odex
system/app/UserDictionaryProvider.apk
system/app/UserDictionaryProvider.odex
system/app/Vending.odex
system/app/Vibe2.odex
system/app/VideoEditorGoogle.odex
system/app/Videos.odex
system/app/VoiceSearch.odex
system/app/Weather.odex
system/app/XT9IME.apk
system/app/XT9IME.odex
system/app/YouTubeTablet.odex
system/app/ZinioReader.odex
system/app/ZinioSettingsProvider.odex
system/bin/brcm_ram_plus
system/bin/debuggerd
system/bin/fu
system/bin/vold
system/bin/wpa_supplicant
system/buildrop
system/framework/am.jar
system/framework/am.odex
system/framework/androidolicy.jar
system/framework/androidolicy.odex
system/framework/android.test.runner.jar
system/framework/android.test.runner.odex
system/framework/apache-xml.jar
system/framework/apache-xml.odex
system/framework/bmgr.jar
system/framework/bmgr.odex
system/framework/bouncycastle.jar
system/framework/bouncycastle.odex
system/framework/com.android.future.usb.accessory.jar
system/framework/com.android.future.usb.accessory.odex
system/framework/com.android.locationrovider.jar
system/framework/com.android.locationrovider.odex
system/framework/core-junit.jar
system/framework/core-junit.odex
system/framework/core.jar
system/framework/core.odex
system/framework/ext.jar
system/framework/ext.odex
system/framework/framework-res.apk
system/framework/framework.jar
system/framework/framework.odex
system/framework/ime.jar
system/framework/ime.odex
system/framework/input.jar
system/framework/input.odex
system/framework/javax.obex.jar
system/framework/javax.obex.odex
system/framework/monkey.jar
system/framework/monkey.odex
system/framework/pm.jar
system/framework/pm.odex
system/framework/services.jar
system/framework/services.odex
system/framework/sqlite-jdbc.jar
system/framework/sqlite-jdbc.odex
system/framework/svc.jar
system/framework/svc.odex
system/lib/drm/libdrmwvmplugin.so
system/lib/hw/gralloc.tegra.so
system/lib/libandroid_servers.so
system/lib/libbcc.so
system/lib/libereader.so
system/lib/libinput.so
system/lib/libjSebring.so
system/lib/libnvomx.so
system/lib/libsensors.mpl.so
system/lib/libsrsprocessing.so
system/lib/libstagefright.so
system/lib/libwebcore.so
system/lib/libwvdrm.so
system/lib/libwvm.so
system/lib/modules/bcm4329.ko
system/lib/modules/scsi_wait_scan.ko