#define NULL ((void *)0)
typedef unsigned long size_t; // Customize by platform.
typedef long intptr_t;
typedef unsigned long uintptr_t;
typedef long scalar_t__; // Either arithmetic or pointer type.
/* By default, we understand bool (as a convenience). */
typedef int bool;
#define false 0
#define true 1

/* Forward declarations */

/* Type definitions */

/* Variables and functions */
int /*<<< orphan*/ printf(char *);
void printUsage(void) {
  printf("\nusage: blockbuster.x [OPTIONS] <file>\n");
  printf("Detect blocks of overlapping reads using a gaussian distribution "
         "approach\n\n");
  printf("[OPTIONS]\n");
  printf("-format <int>              file format of input file (default: 1)\n");
  printf("                            (1) bed\n");
  printf("                            (2) segemehl-output\n");
  printf("-distance <int>            minimum distance between two clusters "
         "(default: 30)\n");
  printf(
      "-minClusterHeight <double> minimum height of a cluster (default: 50)\n");
  printf("-minBlockHeight <double>   minimum height of a block (default: 2)\n");
  printf("-scale <int>               scale stddev for a single read (default: "
         "0.2)\n");
  printf("-merge <int>               merge reads with almost similar means "
         "(default: 0)\n");
  printf("-tagFilter <int>           skip tags with expression smaller than "
         "this value (default: 0)\n");
  printf("-print <int>               print out: (1) blocks (2) reads (default: "
         "1)\n");
  printf("-chr <string>              chromosome (default: all)\n");
  printf(
      "-blockHeight <string>      minBlockHeight threshold (default: abs)\n");
  printf("                            abs: absolute read count\n");
  printf("                            rel: relative read count with respect to "
         "expression of cluster\n");
  printf("[COMPLAINT DEPARTMENT]\n");
  printf("Please be nice when complaining to david@bioinf.uni-leipzig.de\n");
  printf("or steve@bioinf.uni-leipzig.de\n\n");
}


x86 assembly (clang, -O0):
<printUsage>:
push   %rbp
mov    %rsp,%rbp
lea    0xee5(%rip),%rdi
call   1030 <printf@plt>
lea    0xf01(%rip),%rdi
call   1030 <printf@plt>
lea    0xf41(%rip),%rdi
call   1030 <printf@plt>
lea    0xf40(%rip),%rdi
call   1030 <printf@plt>
lea    0xf77(%rip),%rdi
call   1030 <printf@plt>
lea    0xf90(%rip),%rdi
call   1030 <printf@plt>
lea    0xfb5(%rip),%rdi
call   1030 <printf@plt>
lea    0xff9(%rip),%rdi
call   1030 <printf@plt>
lea    0x1033(%rip),%rdi
call   1030 <printf@plt>
lea    0x106a(%rip),%rdi
call   1030 <printf@plt>
lea    0x10a8(%rip),%rdi
call   1030 <printf@plt>
lea    0x10eb(%rip),%rdi
call   1030 <printf@plt>
lea    0x113a(%rip),%rdi
call   1030 <printf@plt>
lea    0x1177(%rip),%rdi
call   1030 <printf@plt>
lea    0x11a1(%rip),%rdi
call   1030 <printf@plt>
lea    0x11d9(%rip),%rdi
call   1030 <printf@plt>
lea    0x1203(%rip),%rdi
call   1030 <printf@plt>
lea    0x1253(%rip),%rdi
call   1030 <printf@plt>
lea    0x125f(%rip),%rdi
call   1030 <printf@plt>
lea    0x1293(%rip),%rdi
call   1030 <printf@plt>
pop    %rbp
ret

x86 assembly (clang, -O2):
<printUsage>:
push   %rax
lea    0xee8(%rip),%rdi
call   1030 <puts@plt>
lea    0xf03(%rip),%rdi
call   1030 <puts@plt>
lea    0xf42(%rip),%rdi
call   1030 <puts@plt>
lea    0xf40(%rip),%rdi
call   1030 <puts@plt>
lea    0xf76(%rip),%rdi
call   1030 <puts@plt>
lea    0xf8e(%rip),%rdi
call   1030 <puts@plt>
lea    0xfb2(%rip),%rdi
call   1030 <puts@plt>
lea    0xff5(%rip),%rdi
call   1030 <puts@plt>
lea    0x102e(%rip),%rdi
call   1030 <puts@plt>
lea    0x1064(%rip),%rdi
call   1030 <puts@plt>
lea    0x10a1(%rip),%rdi
call   1030 <puts@plt>
lea    0x10e3(%rip),%rdi
call   1030 <puts@plt>
lea    0x1131(%rip),%rdi
call   1030 <puts@plt>
lea    0x116d(%rip),%rdi
call   1030 <puts@plt>
lea    0x1196(%rip),%rdi
call   1030 <puts@plt>
lea    0x11cd(%rip),%rdi
call   1030 <puts@plt>
lea    0x11f6(%rip),%rdi
call   1030 <puts@plt>
lea    0x1245(%rip),%rdi
call   1030 <puts@plt>
lea    0x1250(%rip),%rdi
call   1030 <puts@plt>
lea    0x1283(%rip),%rdi
pop    %rax
jmp    1030 <puts@plt>

LLVM IR (-O0):
@.str = [40 x i8] c"\0Ausage: blockbuster.x [OPTIONS] <file>\0A\00"
@.str.1 = [76 x i8] c"Detect blocks of overlapping reads using a gaussian distribution approach\0A\0A\00"
@.str.2 = [11 x i8] c"[OPTIONS]\0A\00"
@.str.3 = [67 x i8] c"-format <int> file format of input file (default: 1)\0A\00"
@.str.4 = [37 x i8] c" (1) bed\0A\00"
@.str.5 = [49 x i8] c" (2) segemehl-output\0A\00"
@.str.6 = [80 x i8] c"-distance <int> minimum distance between two clusters (default: 30)\0A\00"
@.str.7 = [70 x i8] c"-minClusterHeight <double> minimum height of a cluster (default: 50)\0A\00"
@.str.8 = [67 x i8] c"-minBlockHeight <double> minimum height of a block (default: 2)\0A\00"
@.str.9 = [74 x i8] c"-scale <int> scale stddev for a single read (default: 0.2)\0A\00"
@.str.10 = [79 x i8] c"-merge <int> merge reads with almost similar means (default: 0)\0A\00"
@.str.11 = [91 x i8] c"-tagFilter <int> skip tags with expression smaller than this value (default: 0)\0A\00"
@.str.12 = [73 x i8] c"-print <int> print out: (1) blocks (2) reads (default: 1)\0A\00"
@.str.13 = [54 x i8] c"-chr <string> chromosome (default: all)\0A\00"
@.str.14 = [68 x i8] c"-blockHeight <string> minBlockHeight threshold (default: abs)\0A\00"
@.str.15 = [54 x i8] c" abs: absolute read count\0A\00"
@.str.16 = [92 x i8] c" rel: relative read count with respect to expression of cluster\0A\00"
@.str.17 = [24 x i8] c"[COMPLAINT DEPARTMENT]\0A\00"
@.str.18 = [64 x i8] c"Please be nice when complaining to david@bioinf.uni-leipzig.de\0A\00"
@.str.19 = [33 x i8] c"or steve@bioinf.uni-leipzig.de\0A\0A\00"
define void @printUsage() {
%1 = call i32 @printf(i8* getelementptr inbounds ([40 x i8], [40 x i8]* @.str, i64 0, i64 0))
%2 = call i32 @printf(i8* getelementptr inbounds ([76 x i8], [76 x i8]* @.str.1, i64 0, i64 0))
%3 = call i32 @printf(i8* getelementptr inbounds ([11 x i8], [11 x i8]* @.str.2, i64 0, i64 0))
%4 = call i32 @printf(i8* getelementptr inbounds ([67 x i8], [67 x i8]* @.str.3, i64 0, i64 0))
%5 = call i32 @printf(i8* getelementptr inbounds ([37 x i8], [37 x i8]* @.str.4, i64 0, i64 0))
%6 = call i32 @printf(i8* getelementptr inbounds ([49 x i8], [49 x i8]* @.str.5, i64 0, i64 0))
%7 = call i32 @printf(i8* getelementptr inbounds ([80 x i8], [80 x i8]* @.str.6, i64 0, i64 0))
%8 = call i32 @printf(i8* getelementptr inbounds ([70 x i8], [70 x i8]* @.str.7, i64 0, i64 0))
%9 = call i32 @printf(i8* getelementptr inbounds ([67 x i8], [67 x i8]* @.str.8, i64 0, i64 0))
%10 = call i32 @printf(i8* getelementptr inbounds ([74 x i8], [74 x i8]* @.str.9, i64 0, i64 0))
%11 = call i32 @printf(i8* getelementptr inbounds ([79 x i8], [79 x i8]* @.str.10, i64 0, i64 0))
%12 = call i32 @printf(i8* getelementptr inbounds ([91 x i8], [91 x i8]* @.str.11, i64 0, i64 0))
%13 = call i32 @printf(i8* getelementptr inbounds ([73 x i8], [73 x i8]* @.str.12, i64 0, i64 0))
%14 = call i32 @printf(i8* getelementptr inbounds ([54 x i8], [54 x i8]* @.str.13, i64 0, i64 0))
%15 = call i32 @printf(i8* getelementptr inbounds ([68 x i8], [68 x i8]* @.str.14, i64 0, i64 0))
%16 = call i32 @printf(i8* getelementptr inbounds ([54 x i8], [54 x i8]* @.str.15, i64 0, i64 0))
%17 = call i32 @printf(i8* getelementptr inbounds ([92 x i8], [92 x i8]* @.str.16, i64 0, i64 0))
%18 = call i32 @printf(i8* getelementptr inbounds ([24 x i8], [24 x i8]* @.str.17, i64 0, i64 0))
%19 = call i32 @printf(i8* getelementptr inbounds ([64 x i8], [64 x i8]* @.str.18, i64 0, i64 0))
%20 = call i32 @printf(i8* getelementptr inbounds ([33 x i8], [33 x i8]* @.str.19, i64 0, i64 0))
ret void
}

LLVM IR (-O2):
@str = [39 x i8] c"\0Ausage: blockbuster.x [OPTIONS] <file>\00"
@str.20 = [75 x i8] c"Detect blocks of overlapping reads using a gaussian distribution approach\0A\00"
@str.21 = [10 x i8] c"[OPTIONS]\00"
@str.22 = [66 x i8] c"-format <int> file format of input file (default: 1)\00"
@str.23 = [36 x i8] c" (1) bed\00"
@str.24 = [48 x i8] c" (2) segemehl-output\00"
@str.25 = [79 x i8] c"-distance <int> minimum distance between two clusters (default: 30)\00"
@str.26 = [69 x i8] c"-minClusterHeight <double> minimum height of a cluster (default: 50)\00"
@str.27 = [66 x i8] c"-minBlockHeight <double> minimum height of a block (default: 2)\00"
@str.28 = [73 x i8] c"-scale <int> scale stddev for a single read (default: 0.2)\00"
@str.29 = [78 x i8] c"-merge <int> merge reads with almost similar means (default: 0)\00"
@str.30 = [90 x i8] c"-tagFilter <int> skip tags with expression smaller than this value (default: 0)\00"
@str.31 = [72 x i8] c"-print <int> print out: (1) blocks (2) reads (default: 1)\00"
@str.32 = [53 x i8] c"-chr <string> chromosome (default: all)\00"
@str.33 = [67 x i8] c"-blockHeight <string> minBlockHeight threshold (default: abs)\00"
@str.34 = [53 x i8] c" abs: absolute read count\00"
@str.35 = [91 x i8] c" rel: relative read count with respect to expression of cluster\00"
@str.36 = [23 x i8] c"[COMPLAINT DEPARTMENT]\00"
@str.37 = [63 x i8] c"Please be nice when complaining to david@bioinf.uni-leipzig.de\00"
@str.38 = [32 x i8] c"or steve@bioinf.uni-leipzig.de\0A\00"
define void @printUsage() {
%1 = tail call i32 @puts(i8* dereferenceable(1) getelementptr inbounds ([39 x i8], [39 x i8]* @str, i64 0, i64 0))
%2 = tail call i32 @puts(i8* dereferenceable(1) getelementptr inbounds ([75 x i8], [75 x i8]* @str.20, i64 0, i64 0))
%3 = tail call i32 @puts(i8* dereferenceable(1) getelementptr inbounds ([10 x i8], [10 x i8]* @str.21, i64 0, i64 0))
%4 = tail call i32 @puts(i8* dereferenceable(1) getelementptr inbounds ([66 x i8], [66 x i8]* @str.22, i64 0, i64 0))
%5 = tail call i32 @puts(i8* dereferenceable(1) getelementptr inbounds ([36 x i8], [36 x i8]* @str.23, i64 0, i64 0))
%6 = tail call i32 @puts(i8* dereferenceable(1) getelementptr inbounds ([48 x i8], [48 x i8]* @str.24, i64 0, i64 0))
%7 = tail call i32 @puts(i8* dereferenceable(1) getelementptr inbounds ([79 x i8], [79 x i8]* @str.25, i64 0, i64 0))
%8 = tail call i32 @puts(i8* dereferenceable(1) getelementptr inbounds ([69 x i8], [69 x i8]* @str.26, i64 0, i64 0))
%9 = tail call i32 @puts(i8* dereferenceable(1) getelementptr inbounds ([66 x i8], [66 x i8]* @str.27, i64 0, i64 0))
%10 = tail call i32 @puts(i8* dereferenceable(1) getelementptr inbounds ([73 x i8], [73 x i8]* @str.28, i64 0, i64 0))
%11 = tail call i32 @puts(i8* dereferenceable(1) getelementptr inbounds ([78 x i8], [78 x i8]* @str.29, i64 0, i64 0))
%12 = tail call i32 @puts(i8* dereferenceable(1) getelementptr inbounds ([90 x i8], [90 x i8]* @str.30, i64 0, i64 0))
%13 = tail call i32 @puts(i8* dereferenceable(1) getelementptr inbounds ([72 x i8], [72 x i8]* @str.31, i64 0, i64 0))
%14 = tail call i32 @puts(i8* dereferenceable(1) getelementptr inbounds ([53 x i8], [53 x i8]* @str.32, i64 0, i64 0))
%15 = tail call i32 @puts(i8* dereferenceable(1) getelementptr inbounds ([67 x i8], [67 x i8]* @str.33, i64 0, i64 0))
%16 = tail call i32 @puts(i8* dereferenceable(1) getelementptr inbounds ([53 x i8], [53 x i8]* @str.34, i64 0, i64 0))
%17 = tail call i32 @puts(i8* dereferenceable(1) getelementptr inbounds ([91 x i8], [91 x i8]* @str.35, i64 0, i64 0))
%18 = tail call i32 @puts(i8* dereferenceable(1) getelementptr inbounds ([23 x i8], [23 x i8]* @str.36, i64 0, i64 0))
%19 = tail call i32 @puts(i8* dereferenceable(1) getelementptr inbounds ([63 x i8], [63 x i8]* @str.37, i64 0, i64 0))
%20 = tail call i32 @puts(i8* dereferenceable(1) getelementptr inbounds ([32 x i8], [32 x i8]* @str.38, i64 0, i64 0))
ret void
}