#define NULL ((void *)0)
typedef unsigned long size_t; // Customize by platform.
typedef long intptr_t;
typedef unsigned long uintptr_t;
typedef long scalar_t__; // Either arithmetic or pointer type.
/* By default, we understand bool (as a convenience). */
typedef int bool;
#define false 0
#define true 1

/* Forward declarations */

/* Type definitions */

/* Variables and functions */
int /*<<< orphan*/ errorExit(char *);
int /*<<< orphan*/ fprintf(int /*<<< orphan*/, char *, ...);
int /*<<< orphan*/ stderr;
void printUsage() {
  fprintf(stderr, "\nBioProspector 4/15/04.\n");
  fprintf(stderr, "Usage: ./BioProspector -i seqfile (options) \n");
  fprintf(stderr, " Seqfile must be in restricted FASTA format.\n\n");
  fprintf(stderr, "Options:\n");
  fprintf(stderr, "  -W \t<motif width (default %d)>\n", 10);
  fprintf(stderr, "  -o \t<output file (default stdout)>\n");
  fprintf(stderr, "  -f \t<background distribution file (default seqfile)>\n");
  fprintf(stderr,
          "  -b \t<background sequence file (default input sequences)>\n");
  fprintf(stderr,
          "  -n \t<number of times trying to find motif (default %d)>\n", 40);
  fprintf(stderr, "  -r \t<number of top motifs to report (default %d)>\n", 5);
  fprintf(
      stderr,
      "  -w \t<second motif block width for two-block motif (default 0)>\n");
  fprintf(stderr, "  -p 1 \t[if two-block motif is palindrome (default 0)]\n");
  fprintf(stderr, "  -G \t<max gap between two motif blocks (default 0)>\n");
  fprintf(stderr, "  -g \t<min gap between two motif blocks (default 0)>\n");
  fprintf(stderr, "  -d 1 \t[if only need to examine forward (default 2)]\n");
  fprintf(stderr,
          "  -a 1 \t[if every sequence contains the motif (default 0)]\n");
  fprintf(stderr,
          "  -h 1 \t[if want more degenerate sites (default fewer sites)]\n");
  fprintf(stderr,
          "  -e \t<expected bases per motif site in the sequences \n\t    "
          "(will use Bayes motif scoring, don't specify if unknown)>\n");
  errorExit("");
}


x86 assembly (clang, -O0):
<printUsage>:
push   %rbp
mov    %rsp,%rbp
mov    0x2eb5(%rip),%rax
mov    (%rax),%edi
lea    0xecc(%rip),%rsi
mov    $0x0,%al
call   1030 <fprintf@plt>
mov    0x2e9e(%rip),%rax
mov    (%rax),%edi
lea    0xece(%rip),%rsi
mov    $0x0,%al
call   1030 <fprintf@plt>
mov    0x2e87(%rip),%rax
mov    (%rax),%edi
lea    0xee5(%rip),%rsi
mov    $0x0,%al
call   1030 <fprintf@plt>
mov    0x2e70(%rip),%rax
mov    (%rax),%edi
lea    0xefd(%rip),%rsi
mov    $0x0,%al
call   1030 <fprintf@plt>
mov    0x2e59(%rip),%rax
mov    (%rax),%edi
lea    0xef0(%rip),%rsi
mov    $0xa,%edx
mov    $0x0,%al
call   1030 <fprintf@plt>
mov    0x2e3d(%rip),%rax
mov    (%rax),%edi
lea    0xef6(%rip),%rsi
mov    $0x0,%al
call   1030 <fprintf@plt>
mov    0x2e26(%rip),%rax
mov    (%rax),%edi
lea    0xf05(%rip),%rsi
mov    $0x0,%al
call   1030 <fprintf@plt>
mov    0x2e0f(%rip),%rax
mov    (%rax),%edi
lea    0xf26(%rip),%rsi
mov    $0x0,%al
call   1030 <fprintf@plt>
mov    0x2df8(%rip),%rax
mov    (%rax),%edi
lea    0xf4b(%rip),%rsi
mov    $0x28,%edx
mov    $0x0,%al
call   1030 <fprintf@plt>
mov    0x2ddc(%rip),%rax
mov    (%rax),%edi
lea    0xf6a(%rip),%rsi
mov    $0x5,%edx
mov    $0x0,%al
call   1030 <fprintf@plt>
mov    0x2dc0(%rip),%rax
mov    (%rax),%edi
lea    0xf83(%rip),%rsi
mov    $0x0,%al
call   1030 <fprintf@plt>
mov    0x2da9(%rip),%rax
mov    (%rax),%edi
lea    0xfae(%rip),%rsi
mov    $0x0,%al
call   1030 <fprintf@plt>
mov    0x2d92(%rip),%rax
mov    (%rax),%edi
lea    0xfcf(%rip),%rsi
mov    $0x0,%al
call   1030 <fprintf@plt>
mov    0x2d7b(%rip),%rax
mov    (%rax),%edi
lea    0xfee(%rip),%rsi
mov    $0x0,%al
call   1030 <fprintf@plt>
mov    0x2d64(%rip),%rax
mov    (%rax),%edi
lea    0x100d(%rip),%rsi
mov    $0x0,%al
call   1030 <fprintf@plt>
mov    0x2d4d(%rip),%rax
mov    (%rax),%edi
lea    0x102d(%rip),%rsi
mov    $0x0,%al
call   1030 <fprintf@plt>
mov    0x2d36(%rip),%rax
mov    (%rax),%edi
lea    0x1052(%rip),%rsi
mov    $0x0,%al
call   1030 <fprintf@plt>
mov    0x2d1f(%rip),%rax
mov    (%rax),%edi
lea    0x107a(%rip),%rsi
mov    $0x0,%al
call   1030 <fprintf@plt>
lea    0xd9d(%rip),%rdi
call   1040 <errorExit@plt>
pop    %rbp
ret

x86 assembly (clang, -O2):
<printUsage>:
push   %rbx
mov    0x2eb8(%rip),%rbx
mov    (%rbx),%edi
lea    0xecf(%rip),%rsi
xor    %eax,%eax
call   1030 <fprintf@plt>
mov    (%rbx),%edi
lea    0xed8(%rip),%rsi
xor    %eax,%eax
call   1030 <fprintf@plt>
mov    (%rbx),%edi
lea    0xef6(%rip),%rsi
xor    %eax,%eax
call   1030 <fprintf@plt>
mov    (%rbx),%edi
lea    0xf15(%rip),%rsi
xor    %eax,%eax
call   1030 <fprintf@plt>
mov    (%rbx),%edi
lea    0xf0f(%rip),%rsi
mov    $0xa,%edx
xor    %eax,%eax
call   1030 <fprintf@plt>
mov    (%rbx),%edi
lea    0xf1c(%rip),%rsi
xor    %eax,%eax
call   1030 <fprintf@plt>
mov    (%rbx),%edi
lea    0xf32(%rip),%rsi
xor    %eax,%eax
call   1030 <fprintf@plt>
mov    (%rbx),%edi
lea    0xf5a(%rip),%rsi
xor    %eax,%eax
call   1030 <fprintf@plt>
mov    (%rbx),%edi
lea    0xf86(%rip),%rsi
mov    $0x28,%edx
xor    %eax,%eax
call   1030 <fprintf@plt>
mov    (%rbx),%edi
lea    0xfac(%rip),%rsi
mov    $0x5,%edx
xor    %eax,%eax
call   1030 <fprintf@plt>
mov    (%rbx),%edi
lea    0xfcc(%rip),%rsi
xor    %eax,%eax
call   1030 <fprintf@plt>
mov    (%rbx),%edi
lea    0xffe(%rip),%rsi
xor    %eax,%eax
call   1030 <fprintf@plt>
mov    (%rbx),%edi
lea    0x1026(%rip),%rsi
xor    %eax,%eax
call   1030 <fprintf@plt>
mov    (%rbx),%edi
lea    0x104c(%rip),%rsi
xor    %eax,%eax
call   1030 <fprintf@plt>
mov    (%rbx),%edi
lea    0x1072(%rip),%rsi
xor    %eax,%eax
call   1030 <fprintf@plt>
mov    (%rbx),%edi
lea    0x1099(%rip),%rsi
xor    %eax,%eax
call   1030 <fprintf@plt>
mov    (%rbx),%edi
lea    0x10c5(%rip),%rsi
xor    %eax,%eax
call   1030 <fprintf@plt>
mov    (%rbx),%edi
lea    0x10f4(%rip),%rsi
xor    %eax,%eax
call   1030 <fprintf@plt>
lea    0xe17(%rip),%rdi
pop    %rbx
jmp    1040 <errorExit@plt>

LLVM IR (-O0):
@stderr = global i32 0
@.str = [25 x i8] c"\0ABioProspector 4/15/04.\0A\00"
@.str.1 = [46 x i8] c"Usage: ./BioProspector -i seqfile (options) \0A\00"
@.str.2 = [47 x i8] c" Seqfile must be in restricted FASTA format.\0A\0A\00"
@.str.3 = [10 x i8] c"Options:\0A\00"
@.str.4 = [34 x i8] c" -W \09<motif width (default %d)>\0A\00"
@.str.5 = [38 x i8] c" -o \09<output file (default stdout)>\0A\00"
@.str.6 = [56 x i8] c" -f \09<background distribution file (default seqfile)>\0A\00"
@.str.7 = [60 x i8] c" -b \09<background sequence file (default input sequences)>\0A\00"
@.str.8 = [59 x i8] c" -n \09<number of times trying to find motif (default %d)>\0A\00"
@.str.9 = [53 x i8] c" -r \09<number of top motifs to report (default %d)>\0A\00"
@.str.10 = [66 x i8] c" -w \09<second motif block width for two-block motif (default 0)>\0A\00"
@.str.11 = [56 x i8] c" -p 1 \09[if two-block motif is palindrome (default 0)]\0A\00"
@.str.12 = [54 x i8] c" -G \09<max gap between two motif blocks (default 0)>\0A\00"
@.str.13 = [54 x i8] c" -g \09<min gap between two motif blocks (default 0)>\0A\00"
@.str.14 = [55 x i8] c" -d 1 \09[if only need to examine forward (default 2)]\0A\00"
@.str.15 = [60 x i8] c" -a 1 \09[if every sequence contains the motif (default 0)]\0A\00"
@.str.16 = [63 x i8] c" -h 1 \09[if want more degenerate sites (default fewer sites)]\0A\00"
@.str.17 = [119 x i8] c" -e \09<expected bases per motif site in the sequences \0A\09 (will use Bayes motif scoring, don't specify if unknown)>\0A\00"
@.str.18 = [1 x i8] zeroinitializer
define void @printUsage() {
%1 = load i32, i32* @stderr
%2 = call i32 (i32, i8*, ...) @fprintf(i32 %1, i8* getelementptr inbounds ([25 x i8], [25 x i8]* @.str, i64 0, i64 0))
%3 = load i32, i32* @stderr
%4 = call i32 (i32, i8*, ...) @fprintf(i32 %3, i8* getelementptr inbounds ([46 x i8], [46 x i8]* @.str.1, i64 0, i64 0))
%5 = load i32, i32* @stderr
%6 = call i32 (i32, i8*, ...) @fprintf(i32 %5, i8* getelementptr inbounds ([47 x i8], [47 x i8]* @.str.2, i64 0, i64 0))
%7 = load i32, i32* @stderr
%8 = call i32 (i32, i8*, ...) @fprintf(i32 %7, i8* getelementptr inbounds ([10 x i8], [10 x i8]* @.str.3, i64 0, i64 0))
%9 = load i32, i32* @stderr
%10 = call i32 (i32, i8*, ...) @fprintf(i32 %9, i8* getelementptr inbounds ([34 x i8], [34 x i8]* @.str.4, i64 0, i64 0), i32 10)
%11 = load i32, i32* @stderr
%12 = call i32 (i32, i8*, ...) @fprintf(i32 %11, i8* getelementptr inbounds ([38 x i8], [38 x i8]* @.str.5, i64 0, i64 0))
%13 = load i32, i32* @stderr
%14 = call i32 (i32, i8*, ...) @fprintf(i32 %13, i8* getelementptr inbounds ([56 x i8], [56 x i8]* @.str.6, i64 0, i64 0))
%15 = load i32, i32* @stderr
%16 = call i32 (i32, i8*, ...) @fprintf(i32 %15, i8* getelementptr inbounds ([60 x i8], [60 x i8]* @.str.7, i64 0, i64 0))
%17 = load i32, i32* @stderr
%18 = call i32 (i32, i8*, ...) @fprintf(i32 %17, i8* getelementptr inbounds ([59 x i8], [59 x i8]* @.str.8, i64 0, i64 0), i32 40)
%19 = load i32, i32* @stderr
%20 = call i32 (i32, i8*, ...) @fprintf(i32 %19, i8* getelementptr inbounds ([53 x i8], [53 x i8]* @.str.9, i64 0, i64 0), i32 5)
%21 = load i32, i32* @stderr
%22 = call i32 (i32, i8*, ...) @fprintf(i32 %21, i8* getelementptr inbounds ([66 x i8], [66 x i8]* @.str.10, i64 0, i64 0))
%23 = load i32, i32* @stderr
%24 = call i32 (i32, i8*, ...) @fprintf(i32 %23, i8* getelementptr inbounds ([56 x i8], [56 x i8]* @.str.11, i64 0, i64 0))
%25 = load i32, i32* @stderr
%26 = call i32 (i32, i8*, ...) @fprintf(i32 %25, i8* getelementptr inbounds ([54 x i8], [54 x i8]* @.str.12, i64 0, i64 0))
%27 = load i32, i32* @stderr
%28 = call i32 (i32, i8*, ...) @fprintf(i32 %27, i8* getelementptr inbounds ([54 x i8], [54 x i8]* @.str.13, i64 0, i64 0))
%29 = load i32, i32* @stderr
%30 = call i32 (i32, i8*, ...) @fprintf(i32 %29, i8* getelementptr inbounds ([55 x i8], [55 x i8]* @.str.14, i64 0, i64 0))
%31 = load i32, i32* @stderr
%32 = call i32 (i32, i8*, ...) @fprintf(i32 %31, i8* getelementptr inbounds ([60 x i8], [60 x i8]* @.str.15, i64 0, i64 0))
%33 = load i32, i32* @stderr
%34 = call i32 (i32, i8*, ...) @fprintf(i32 %33, i8* getelementptr inbounds ([63 x i8], [63 x i8]* @.str.16, i64 0, i64 0))
%35 = load i32, i32* @stderr
%36 = call i32 (i32, i8*, ...) @fprintf(i32 %35, i8* getelementptr inbounds ([119 x i8], [119 x i8]* @.str.17, i64 0, i64 0))
%37 = call i32 @errorExit(i8* getelementptr inbounds ([1 x i8], [1 x i8]* @.str.18, i64 0, i64 0))
ret void
}

LLVM IR (-O2):
@stderr = global i32 0
@.str = [25 x i8] c"\0ABioProspector 4/15/04.\0A\00"
@.str.1 = [46 x i8] c"Usage: ./BioProspector -i seqfile (options) \0A\00"
@.str.2 = [47 x i8] c" Seqfile must be in restricted FASTA format.\0A\0A\00"
@.str.3 = [10 x i8] c"Options:\0A\00"
@.str.4 = [34 x i8] c" -W \09<motif width (default %d)>\0A\00"
@.str.5 = [38 x i8] c" -o \09<output file (default stdout)>\0A\00"
@.str.6 = [56 x i8] c" -f \09<background distribution file (default seqfile)>\0A\00"
@.str.7 = [60 x i8] c" -b \09<background sequence file (default input sequences)>\0A\00"
@.str.8 = [59 x i8] c" -n \09<number of times trying to find motif (default %d)>\0A\00"
@.str.9 = [53 x i8] c" -r \09<number of top motifs to report (default %d)>\0A\00"
@.str.10 = [66 x i8] c" -w \09<second motif block width for two-block motif (default 0)>\0A\00"
@.str.11 = [56 x i8] c" -p 1 \09[if two-block motif is palindrome (default 0)]\0A\00"
@.str.12 = [54 x i8] c" -G \09<max gap between two motif blocks (default 0)>\0A\00"
@.str.13 = [54 x i8] c" -g \09<min gap between two motif blocks (default 0)>\0A\00"
@.str.14 = [55 x i8] c" -d 1 \09[if only need to examine forward (default 2)]\0A\00"
@.str.15 = [60 x i8] c" -a 1 \09[if every sequence contains the motif (default 0)]\0A\00"
@.str.16 = [63 x i8] c" -h 1 \09[if want more degenerate sites (default fewer sites)]\0A\00"
@.str.17 = [119 x i8] c" -e \09<expected bases per motif site in the sequences \0A\09 (will use Bayes motif scoring, don't specify if unknown)>\0A\00"
@.str.18 = [1 x i8] zeroinitializer
define void @printUsage() {
%1 = load i32, i32* @stderr
%2 = tail call i32 (i32, i8*, ...) @fprintf(i32 %1, i8* getelementptr inbounds ([25 x i8], [25 x i8]* @.str, i64 0, i64 0))
%3 = load i32, i32* @stderr
%4 = tail call i32 (i32, i8*, ...) @fprintf(i32 %3, i8* getelementptr inbounds ([46 x i8], [46 x i8]* @.str.1, i64 0, i64 0))
%5 = load i32, i32* @stderr
%6 = tail call i32 (i32, i8*, ...) @fprintf(i32 %5, i8* getelementptr inbounds ([47 x i8], [47 x i8]* @.str.2, i64 0, i64 0))
%7 = load i32, i32* @stderr
%8 = tail call i32 (i32, i8*, ...) @fprintf(i32 %7, i8* getelementptr inbounds ([10 x i8], [10 x i8]* @.str.3, i64 0, i64 0))
%9 = load i32, i32* @stderr
%10 = tail call i32 (i32, i8*, ...) @fprintf(i32 %9, i8* getelementptr inbounds ([34 x i8], [34 x i8]* @.str.4, i64 0, i64 0), i32 10)
%11 = load i32, i32* @stderr
%12 = tail call i32 (i32, i8*, ...) @fprintf(i32 %11, i8* getelementptr inbounds ([38 x i8], [38 x i8]* @.str.5, i64 0, i64 0))
%13 = load i32, i32* @stderr
%14 = tail call i32 (i32, i8*, ...) @fprintf(i32 %13, i8* getelementptr inbounds ([56 x i8], [56 x i8]* @.str.6, i64 0, i64 0))
%15 = load i32, i32* @stderr
%16 = tail call i32 (i32, i8*, ...) @fprintf(i32 %15, i8* getelementptr inbounds ([60 x i8], [60 x i8]* @.str.7, i64 0, i64 0))
%17 = load i32, i32* @stderr
%18 = tail call i32 (i32, i8*, ...) @fprintf(i32 %17, i8* getelementptr inbounds ([59 x i8], [59 x i8]* @.str.8, i64 0, i64 0), i32 40)
%19 = load i32, i32* @stderr
%20 = tail call i32 (i32, i8*, ...) @fprintf(i32 %19, i8* getelementptr inbounds ([53 x i8], [53 x i8]* @.str.9, i64 0, i64 0), i32 5)
%21 = load i32, i32* @stderr
%22 = tail call i32 (i32, i8*, ...) @fprintf(i32 %21, i8* getelementptr inbounds ([66 x i8], [66 x i8]* @.str.10, i64 0, i64 0))
%23 = load i32, i32* @stderr
%24 = tail call i32 (i32, i8*, ...) @fprintf(i32 %23, i8* getelementptr inbounds ([56 x i8], [56 x i8]* @.str.11, i64 0, i64 0))
%25 = load i32, i32* @stderr
%26 = tail call i32 (i32, i8*, ...) @fprintf(i32 %25, i8* getelementptr inbounds ([54 x i8], [54 x i8]* @.str.12, i64 0, i64 0))
%27 = load i32, i32* @stderr
%28 = tail call i32 (i32, i8*, ...) @fprintf(i32 %27, i8* getelementptr inbounds ([54 x i8], [54 x i8]* @.str.13, i64 0, i64 0))
%29 = load i32, i32* @stderr
%30 = tail call i32 (i32, i8*, ...) @fprintf(i32 %29, i8* getelementptr inbounds ([55 x i8], [55 x i8]* @.str.14, i64 0, i64 0))
%31 = load i32, i32* @stderr
%32 = tail call i32 (i32, i8*, ...) @fprintf(i32 %31, i8* getelementptr inbounds ([60 x i8], [60 x i8]* @.str.15, i64 0, i64 0))
%33 = load i32, i32* @stderr
%34 = tail call i32 (i32, i8*, ...) @fprintf(i32 %33, i8* getelementptr inbounds ([63 x i8], [63 x i8]* @.str.16, i64 0, i64 0))
%35 = load i32, i32* @stderr
%36 = tail call i32 (i32, i8*, ...) @fprintf(i32 %35, i8* getelementptr inbounds ([119 x i8], [119 x i8]* @.str.17, i64 0, i64 0))
%37 = tail call i32 @errorExit(i8* getelementptr inbounds ([1 x i8], [1 x i8]* @.str.18, i64 0, i64 0))
ret void
}