#define NULL ((void *)0)
typedef unsigned long size_t; // Customize by platform.
typedef long intptr_t;
typedef unsigned long uintptr_t;
typedef long scalar_t__; // Either arithmetic or pointer type.
/* By default, we understand bool (as a convenience). */
typedef int bool;
#define false 0
#define true 1

/* Forward declarations */

/* Type definitions */

/* Variables and functions */
int /*<<< orphan*/ printf(char *);
void mainUsage(void) {
  printf("  cmd <db.fa> <read.fq>\n");
  printf("\n  get help by 'cmd -h'\n");
  printf("Mapping Options Options:\n");
  printf("  -b, --the number of mapping thread(Default: 10)\n");
  printf("  -p, --specify the kmer prefixes, e.g.,'CG', 'AT', and 'TAG' "
         "(Default: '-p CG'). 'AA' is not recommended as a prefix.\n");
  printf("  -k, --length of a kmer used in locate local alignment. (Default: "
         "'-k 8')\n");
  printf("  -e, --the tolerance rate of mismatches.(Default: '-e 0.05')\n");
  printf("  -L, --the mini length of a legal alignment.(Default: '-l 12')\n");
  printf("  -o, --open the complementart palindrome mode.(Default: '-o 1' "
         "means start,otherwise'-o 0')\n");
}


x86 assembly (clang, -O0):
<mainUsage>:
push   %rbp
mov    %rsp,%rbp
lea    0xee5(%rip),%rdi
call   1030 <printf@plt>
lea    0xef2(%rip),%rdi
call   1030 <printf@plt>
lea    0xeff(%rip),%rdi
call   1030 <printf@plt>
lea    0xf0d(%rip),%rdi
call   1030 <printf@plt>
lea    0xf34(%rip),%rdi
call   1030 <printf@plt>
lea    0xfa0(%rip),%rdi
call   1030 <printf@plt>
lea    0xfe0(%rip),%rdi
call   1030 <printf@plt>
lea    0x1013(%rip),%rdi
call   1030 <printf@plt>
lea    0x1048(%rip),%rdi
call   1030 <printf@plt>
pop    %rbp
ret

x86 assembly (clang, -O2):
<mainUsage>:
push   %rax
lea    0xee8(%rip),%rdi
call   1030 <puts@plt>
lea    0xef4(%rip),%rdi
call   1030 <puts@plt>
lea    0xf00(%rip),%rdi
call   1030 <puts@plt>
lea    0xf0d(%rip),%rdi
call   1030 <puts@plt>
lea    0xf33(%rip),%rdi
call   1030 <puts@plt>
lea    0xf9e(%rip),%rdi
call   1030 <puts@plt>
lea    0xfdd(%rip),%rdi
call   1030 <puts@plt>
lea    0x100f(%rip),%rdi
call   1030 <puts@plt>
lea    0x1043(%rip),%rdi
pop    %rax
jmp    1030 <puts@plt>

LLVM IR (-O0):
@.str = [25 x i8] c" cmd <db.fa> <read.fq>\0A\00"
@.str.1 = [25 x i8] c"\0A get help by 'cmd -h'\0A\00"
@.str.2 = [26 x i8] c"Mapping Options Options:\0A\00"
@.str.3 = [51 x i8] c" -b, --the number of mapping thread(Default: 10)\0A\00"
@.str.4 = [120 x i8] c" -p, --specify the kmer prefixes, e.g.,'CG', 'AT', and 'TAG' (Default: '-p CG'). 'AA' is not recommended as a prefix.\0A\00"
@.str.5 = [76 x i8] c" -k, --length of a kmer used in locate local alignment. (Default: '-k 8')\0A\00"
@.str.6 = [63 x i8] c" -e, --the tolerance rate of mismatches.(Default: '-e 0.05')\0A\00"
@.str.7 = [65 x i8] c" -L, --the mini length of a legal alignment.(Default: '-l 12')\0A\00"
@.str.8 = [94 x i8] c" -o, --open the complementart palindrome mode.(Default: '-o 1' means start,otherwise'-o 0')\0A\00"
define void @mainUsage() {
%1 = call i32 @printf(i8* getelementptr inbounds ([25 x i8], [25 x i8]* @.str, i64 0, i64 0))
%2 = call i32 @printf(i8* getelementptr inbounds ([25 x i8], [25 x i8]* @.str.1, i64 0, i64 0))
%3 = call i32 @printf(i8* getelementptr inbounds ([26 x i8], [26 x i8]* @.str.2, i64 0, i64 0))
%4 = call i32 @printf(i8* getelementptr inbounds ([51 x i8], [51 x i8]* @.str.3, i64 0, i64 0))
%5 = call i32 @printf(i8* getelementptr inbounds ([120 x i8], [120 x i8]* @.str.4, i64 0, i64 0))
%6 = call i32 @printf(i8* getelementptr inbounds ([76 x i8], [76 x i8]* @.str.5, i64 0, i64 0))
%7 = call i32 @printf(i8* getelementptr inbounds ([63 x i8], [63 x i8]* @.str.6, i64 0, i64 0))
%8 = call i32 @printf(i8* getelementptr inbounds ([65 x i8], [65 x i8]* @.str.7, i64 0, i64 0))
%9 = call i32 @printf(i8* getelementptr inbounds ([94 x i8], [94 x i8]* @.str.8, i64 0, i64 0))
ret void
}

LLVM IR (-O2):
@str = [24 x i8] c" cmd <db.fa> <read.fq>\00"
@str.9 = [24 x i8] c"\0A get help by 'cmd -h'\00"
@str.10 = [25 x i8] c"Mapping Options Options:\00"
@str.11 = [50 x i8] c" -b, --the number of mapping thread(Default: 10)\00"
@str.12 = [119 x i8] c" -p, --specify the kmer prefixes, e.g.,'CG', 'AT', and 'TAG' (Default: '-p CG'). 'AA' is not recommended as a prefix.\00"
@str.13 = [75 x i8] c" -k, --length of a kmer used in locate local alignment. (Default: '-k 8')\00"
@str.14 = [62 x i8] c" -e, --the tolerance rate of mismatches.(Default: '-e 0.05')\00"
@str.15 = [64 x i8] c" -L, --the mini length of a legal alignment.(Default: '-l 12')\00"
@str.16 = [93 x i8] c" -o, --open the complementart palindrome mode.(Default: '-o 1' means start,otherwise'-o 0')\00"
define void @mainUsage() {
%1 = tail call i32 @puts(i8* dereferenceable(1) getelementptr inbounds ([24 x i8], [24 x i8]* @str, i64 0, i64 0))
%2 = tail call i32 @puts(i8* dereferenceable(1) getelementptr inbounds ([24 x i8], [24 x i8]* @str.9, i64 0, i64 0))
%3 = tail call i32 @puts(i8* dereferenceable(1) getelementptr inbounds ([25 x i8], [25 x i8]* @str.10, i64 0, i64 0))
%4 = tail call i32 @puts(i8* dereferenceable(1) getelementptr inbounds ([50 x i8], [50 x i8]* @str.11, i64 0, i64 0))
%5 = tail call i32 @puts(i8* dereferenceable(1) getelementptr inbounds ([119 x i8], [119 x i8]* @str.12, i64 0, i64 0))
%6 = tail call i32 @puts(i8* dereferenceable(1) getelementptr inbounds ([75 x i8], [75 x i8]* @str.13, i64 0, i64 0))
%7 = tail call i32 @puts(i8* dereferenceable(1) getelementptr inbounds ([62 x i8], [62 x i8]* @str.14, i64 0, i64 0))
%8 = tail call i32 @puts(i8* dereferenceable(1) getelementptr inbounds ([64 x i8], [64 x i8]* @str.15, i64 0, i64 0))
%9 = tail call i32 @puts(i8* dereferenceable(1) getelementptr inbounds ([93 x i8], [93 x i8]* @str.16, i64 0, i64 0))
ret void
}