#define NULL ((void *)0)
typedef unsigned long size_t; // Customize by platform.
typedef long intptr_t;
typedef unsigned long uintptr_t;
typedef long scalar_t__; // Either arithmetic or pointer type.
/* By default, we understand bool (as a convenience). */
typedef int bool;
#define false 0
#define true 1

/* Forward declarations */

/* Type definitions */

/* Variables and functions */
int /*<<< orphan*/ fprintf(int /*<<< orphan*/, char *);
int /*<<< orphan*/ stderr;
void print_help(void) {
  fprintf(stderr, "Usage: lava <option> [option parameters ...]\n");
  fprintf(stderr, "Option  Description                   Parameters\n");
  fprintf(stderr, "------  -----------                   ----------\n");
  fprintf(stderr,
          "dict    Generate dictionary files     "
          "<input FASTA> <input SNPs> <output ref dict> <output SNP dict>\n");
  fprintf(stderr, "filt    Filter reference dictionary   "
                  "<ref dict> <snp_pos file> <output ref dict>\n");
  fprintf(stderr, "lava    Perform genotyping            "
                  "<input ref dict> <input SNP dict> <input FASTQ> <chrlens "
                  "file> <output file>\n");
}


x86 assembly (clang, -O0):
<print_help>:
push   %rbp
mov    %rsp,%rbp
mov    0x2ec5(%rip),%rax
mov    (%rax),%edi
lea    0xedc(%rip),%rsi
call   1030 <fprintf@plt>
mov    0x2eb0(%rip),%rax
mov    (%rax),%edi
lea    0xef5(%rip),%rsi
call   1030 <fprintf@plt>
mov    0x2e9b(%rip),%rax
mov    (%rax),%edi
lea    0xf12(%rip),%rsi
call   1030 <fprintf@plt>
mov    0x2e86(%rip),%rax
mov    (%rax),%edi
lea    0xf2f(%rip),%rsi
call   1030 <fprintf@plt>
mov    0x2e71(%rip),%rax
mov    (%rax),%edi
lea    0xf80(%rip),%rsi
call   1030 <fprintf@plt>
mov    0x2e5c(%rip),%rax
mov    (%rax),%edi
lea    0xfbe(%rip),%rsi
call   1030 <fprintf@plt>
pop    %rbp
ret

x86 assembly (clang, -O2):
<print_help>:
push   %rbx
mov    0x2ec8(%rip),%rbx
mov    (%rbx),%edi
lea    0xedf(%rip),%rsi
call   1030 <fprintf@plt>
mov    (%rbx),%edi
lea    0xeff(%rip),%rsi
call   1030 <fprintf@plt>
mov    (%rbx),%edi
lea    0xf23(%rip),%rsi
call   1030 <fprintf@plt>
mov    (%rbx),%edi
lea    0xf47(%rip),%rsi
call   1030 <fprintf@plt>
mov    (%rbx),%edi
lea    0xf9f(%rip),%rsi
call   1030 <fprintf@plt>
mov    (%rbx),%edi
lea    0xfe4(%rip),%rsi
pop    %rbx
jmp    1030 <fprintf@plt>

LLVM IR (-O0):
@stderr = global i32 0
@.str = [46 x i8] c"Usage: lava <option> [option parameters ...]\0A\00"
@.str.1 = [50 x i8] c"Option Description Parameters\0A\00"
@.str.2 = [50 x i8] c"------ ----------- ----------\0A\00"
@.str.3 = [102 x i8] c"dict Generate dictionary files <input FASTA> <input SNPs> <output ref dict> <output SNP dict>\0A\00"
@.str.4 = [83 x i8] c"filt Filter reference dictionary <ref dict> <snp_pos file> <output ref dict>\0A\00"
@.str.5 = [116 x i8] c"lava Perform genotyping <input ref dict> <input SNP dict> <input FASTQ> <chrlens file> <output file>\0A\00"
define void @print_help() {
%1 = load i32, i32* @stderr
%2 = call i32 @fprintf(i32 %1, i8* getelementptr inbounds ([46 x i8], [46 x i8]* @.str, i64 0, i64 0))
%3 = load i32, i32* @stderr
%4 = call i32 @fprintf(i32 %3, i8* getelementptr inbounds ([50 x i8], [50 x i8]* @.str.1, i64 0, i64 0))
%5 = load i32, i32* @stderr
%6 = call i32 @fprintf(i32 %5, i8* getelementptr inbounds ([50 x i8], [50 x i8]* @.str.2, i64 0, i64 0))
%7 = load i32, i32* @stderr
%8 = call i32 @fprintf(i32 %7, i8* getelementptr inbounds ([102 x i8], [102 x i8]* @.str.3, i64 0, i64 0))
%9 = load i32, i32* @stderr
%10 = call i32 @fprintf(i32 %9, i8* getelementptr inbounds ([83 x i8], [83 x i8]* @.str.4, i64 0, i64 0))
%11 = load i32, i32* @stderr
%12 = call i32 @fprintf(i32 %11, i8* getelementptr inbounds ([116 x i8], [116 x i8]* @.str.5, i64 0, i64 0))
ret void
}

LLVM IR (-O2):
@stderr = global i32 0
@.str = [46 x i8] c"Usage: lava <option> [option parameters ...]\0A\00"
@.str.1 = [50 x i8] c"Option Description Parameters\0A\00"
@.str.2 = [50 x i8] c"------ ----------- ----------\0A\00"
@.str.3 = [102 x i8] c"dict Generate dictionary files <input FASTA> <input SNPs> <output ref dict> <output SNP dict>\0A\00"
@.str.4 = [83 x i8] c"filt Filter reference dictionary <ref dict> <snp_pos file> <output ref dict>\0A\00"
@.str.5 = [116 x i8] c"lava Perform genotyping <input ref dict> <input SNP dict> <input FASTQ> <chrlens file> <output file>\0A\00"
define void @print_help() {
%1 = load i32, i32* @stderr
%2 = tail call i32 @fprintf(i32 %1, i8* getelementptr inbounds ([46 x i8], [46 x i8]* @.str, i64 0, i64 0))
%3 = load i32, i32* @stderr
%4 = tail call i32 @fprintf(i32 %3, i8* getelementptr inbounds ([50 x i8], [50 x i8]* @.str.1, i64 0, i64 0))
%5 = load i32, i32* @stderr
%6 = tail call i32 @fprintf(i32 %5, i8* getelementptr inbounds ([50 x i8], [50 x i8]* @.str.2, i64 0, i64 0))
%7 = load i32, i32* @stderr
%8 = tail call i32 @fprintf(i32 %7, i8* getelementptr inbounds ([102 x i8], [102 x i8]* @.str.3, i64 0, i64 0))
%9 = load i32, i32* @stderr
%10 = tail call i32 @fprintf(i32 %9, i8* getelementptr inbounds ([83 x i8], [83 x i8]* @.str.4, i64 0, i64 0))
%11 = load i32, i32* @stderr
%12 = tail call i32 @fprintf(i32 %11, i8* getelementptr inbounds ([116 x i8], [116 x i8]* @.str.5, i64 0, i64 0))
ret void
}