#define NULL ((void *)0)
typedef unsigned long size_t; // Customize by platform.
typedef long intptr_t;
typedef unsigned long uintptr_t;
typedef long scalar_t__; // Either arithmetic or pointer type.
/* By default, we understand bool (as a convenience). */
typedef int bool;
#define false 0
#define true 1

/* Forward declarations */

/* Type definitions */

/* Variables and functions */
int /*<<< orphan*/ exit(int /*<<< orphan*/);
int /*<<< orphan*/ printf(char *);
void help() {
  printf("Usage:\n");
  printf("       mreps [ <options> ] { <sequencefile> | -s <sequence> }\n");
  printf("finds tandemly repeated fragments in a DNA sequence \n\n");
  printf("The options are :\n");
  printf(" -s <string>  : specifies the sequence in command line\n");
  printf(" -fasta       : allows DNA sequences in FASTA format \n\n");
  printf(" -res n       : \"resolution\" (error level)\n");
  printf(" -from n      : starting position n\n");
  printf(" -to n        : end position n\n");
  printf(" -minsize n   : repeats whose size is at least n\n");
  printf(" -maxsize n   : repeats whose size is at most n\n");
  printf(" -minperiod n : repeats whose period is at least n\n");
  printf(" -maxperiod n : repeats whose period is at most n\n");
  printf(" -exp x       : repeats whose exponent is at least x\n");
  printf(" -allowsmall  : output small repeats that can occur randomly\n\n");
  printf(" -win n       : process by sliding windows of size 2*n overlaping by "
         "n\n");
  printf(" -version     : show version\n");
  printf(" -xmloutput <file> : outputs to <file> in xml format\n");
  printf(" -noprint     : if specified, the repetition sequences will not be "
         "output \n");
  printf("\nExample:\n");
  printf("mreps -res 3 -exp 3.0 -from 10000 -to 12000 ecolim52.fas\n\n");
  exit(0);
}


x86 assembly (clang, -O0):
<help>:
push   %rbp
mov    %rsp,%rbp
lea    0xed5(%rip),%rdi
call   1030 <printf@plt>
lea    0xed1(%rip),%rdi
call   1030 <printf@plt>
lea    0xf04(%rip),%rdi
call   1030 <printf@plt>
lea    0xf2f(%rip),%rdi
call   1030 <printf@plt>
lea    0xf36(%rip),%rdi
call   1030 <printf@plt>
lea    0xf62(%rip),%rdi
call   1030 <printf@plt>
lea    0xf8e(%rip),%rdi
call   1030 <printf@plt>
lea    0xfae(%rip),%rdi
call   1030 <printf@plt>
lea    0xfc7(%rip),%rdi
call   1030 <printf@plt>
lea    0xfdb(%rip),%rdi
call   1030 <printf@plt>
lea    0x1001(%rip),%rdi
call   1030 <printf@plt>
lea    0x1026(%rip),%rdi
call   1030 <printf@plt>
lea    0x104e(%rip),%rdi
call   1030 <printf@plt>
lea    0x1075(%rip),%rdi
call   1030 <printf@plt>
lea    0x109f(%rip),%rdi
call   1030 <printf@plt>
lea    0x10d2(%rip),%rdi
call   1030 <printf@plt>
lea    0x110e(%rip),%rdi
call   1030 <printf@plt>
lea    0x1120(%rip),%rdi
call   1030 <printf@plt>
lea    0x114a(%rip),%rdi
call   1030 <printf@plt>
lea    0x118a(%rip),%rdi
call   1030 <printf@plt>
lea    0x1189(%rip),%rdi
call   1030 <printf@plt>
xor    %edi,%edi
call   1040 <exit@plt>

x86 assembly (clang, -O2):
<help>:
push   %rax
lea    0xed8(%rip),%rdi
call   1030 <puts@plt>
lea    0xed3(%rip),%rdi
call   1030 <puts@plt>
lea    0xf05(%rip),%rdi
call   1030 <puts@plt>
lea    0xf2f(%rip),%rdi
call   1030 <puts@plt>
lea    0xf35(%rip),%rdi
call   1030 <puts@plt>
lea    0xf60(%rip),%rdi
call   1030 <puts@plt>
lea    0xf8b(%rip),%rdi
call   1030 <puts@plt>
lea    0xfaa(%rip),%rdi
call   1030 <puts@plt>
lea    0xfc2(%rip),%rdi
call   1030 <puts@plt>
lea    0xfd5(%rip),%rdi
call   1030 <puts@plt>
lea    0xffa(%rip),%rdi
call   1030 <puts@plt>
lea    0x101e(%rip),%rdi
call   1030 <puts@plt>
lea    0x1045(%rip),%rdi
call   1030 <puts@plt>
lea    0x106b(%rip),%rdi
call   1030 <puts@plt>
lea    0x1094(%rip),%rdi
call   1030 <puts@plt>
lea    0x10c6(%rip),%rdi
call   1030 <puts@plt>
lea    0x1101(%rip),%rdi
call   1030 <puts@plt>
lea    0x1112(%rip),%rdi
call   1030 <puts@plt>
lea    0x113b(%rip),%rdi
call   1030 <puts@plt>
lea    0x117a(%rip),%rdi
call   1030 <puts@plt>
lea    0x1178(%rip),%rdi
call   1030 <puts@plt>
xor    %edi,%edi
call   1040 <exit@plt>

LLVM IR (-O0):
@.str = [8 x i8] c"Usage:\0A\00"
@.str.1 = [63 x i8] c" mreps [ <options> ] { <sequencefile> | -s <sequence> }\0A\00"
@.str.2 = [55 x i8] c"finds tandemly repeated fragments in a DNA sequence \0A\0A\00"
@.str.3 = [19 x i8] c"The options are :\0A\00"
@.str.4 = [56 x i8] c" -s <string> : specifies the sequence in command line\0A\00"
@.str.5 = [56 x i8] c" -fasta : allows DNA sequences in FASTA format \0A\0A\00"
@.str.6 = [44 x i8] c" -res n : \22resolution\22 (error level)\0A\00"
@.str.7 = [37 x i8] c" -from n : starting position n\0A\00"
@.str.8 = [32 x i8] c" -to n : end position n\0A\00"
@.str.9 = [50 x i8] c" -minsize n : repeats whose size is at least n\0A\00"
@.str.10 = [49 x i8] c" -maxsize n : repeats whose size is at most n\0A\00"
@.str.11 = [52 x i8] c" -minperiod n : repeats whose period is at least n\0A\00"
@.str.12 = [51 x i8] c" -maxperiod n : repeats whose period is at most n\0A\00"
@.str.13 = [54 x i8] c" -exp x : repeats whose exponent is at least x\0A\00"
@.str.14 = [63 x i8] c" -allowsmall : output small repeats that can occur randomly\0A\0A\00"
@.str.15 = [72 x i8] c" -win n : process by sliding windows of size 2*n overlaping by n\0A\00"
@.str.16 = [30 x i8] c" -version : show version\0A\00"
@.str.17 = [54 x i8] c" -xmloutput <file> : outputs to <file> in xml format\0A\00"
@.str.18 = [76 x i8] c" -noprint : if specified, the repetition sequences will not be output \0A\00"
@.str.19 = [11 x i8] c"\0AExample:\0A\00"
@.str.20 = [59 x i8] c"mreps -res 3 -exp 3.0 -from 10000 -to 12000 ecolim52.fas\0A\0A\00"
define void @help() {
%1 = call i32 @printf(i8* getelementptr inbounds ([8 x i8], [8 x i8]* @.str, i64 0, i64 0))
%2 = call i32 @printf(i8* getelementptr inbounds ([63 x i8], [63 x i8]* @.str.1, i64 0, i64 0))
%3 = call i32 @printf(i8* getelementptr inbounds ([55 x i8], [55 x i8]* @.str.2, i64 0, i64 0))
%4 = call i32 @printf(i8* getelementptr inbounds ([19 x i8], [19 x i8]* @.str.3, i64 0, i64 0))
%5 = call i32 @printf(i8* getelementptr inbounds ([56 x i8], [56 x i8]* @.str.4, i64 0, i64 0))
%6 = call i32 @printf(i8* getelementptr inbounds ([56 x i8], [56 x i8]* @.str.5, i64 0, i64 0))
%7 = call i32 @printf(i8* getelementptr inbounds ([44 x i8], [44 x i8]* @.str.6, i64 0, i64 0))
%8 = call i32 @printf(i8* getelementptr inbounds ([37 x i8], [37 x i8]* @.str.7, i64 0, i64 0))
%9 = call i32 @printf(i8* getelementptr inbounds ([32 x i8], [32 x i8]* @.str.8, i64 0, i64 0))
%10 = call i32 @printf(i8* getelementptr inbounds ([50 x i8], [50 x i8]* @.str.9, i64 0, i64 0))
%11 = call i32 @printf(i8* getelementptr inbounds ([49 x i8], [49 x i8]* @.str.10, i64 0, i64 0))
%12 = call i32 @printf(i8* getelementptr inbounds ([52 x i8], [52 x i8]* @.str.11, i64 0, i64 0))
%13 = call i32 @printf(i8* getelementptr inbounds ([51 x i8], [51 x i8]* @.str.12, i64 0, i64 0))
%14 = call i32 @printf(i8* getelementptr inbounds ([54 x i8], [54 x i8]* @.str.13, i64 0, i64 0))
%15 = call i32 @printf(i8* getelementptr inbounds ([63 x i8], [63 x i8]* @.str.14, i64 0, i64 0))
%16 = call i32 @printf(i8* getelementptr inbounds ([72 x i8], [72 x i8]* @.str.15, i64 0, i64 0))
%17 = call i32 @printf(i8* getelementptr inbounds ([30 x i8], [30 x i8]* @.str.16, i64 0, i64 0))
%18 = call i32 @printf(i8* getelementptr inbounds ([54 x i8], [54 x i8]* @.str.17, i64 0, i64 0))
%19 = call i32 @printf(i8* getelementptr inbounds ([76 x i8], [76 x i8]* @.str.18, i64 0, i64 0))
%20 = call i32 @printf(i8* getelementptr inbounds ([11 x i8], [11 x i8]* @.str.19, i64 0, i64 0))
%21 = call i32 @printf(i8* getelementptr inbounds ([59 x i8], [59 x i8]* @.str.20, i64 0, i64 0))
%22 = call i32 @exit(i32 0)
unreachable
}

LLVM IR (-O2):
@str = [7 x i8] c"Usage:\00"
@str.21 = [62 x i8] c" mreps [ <options> ] { <sequencefile> | -s <sequence> }\00"
@str.22 = [54 x i8] c"finds tandemly repeated fragments in a DNA sequence \0A\00"
@str.23 = [18 x i8] c"The options are :\00"
@str.24 = [55 x i8] c" -s <string> : specifies the sequence in command line\00"
@str.25 = [55 x i8] c" -fasta : allows DNA sequences in FASTA format \0A\00"
@str.26 = [43 x i8] c" -res n : \22resolution\22 (error level)\00"
@str.27 = [36 x i8] c" -from n : starting position n\00"
@str.28 = [31 x i8] c" -to n : end position n\00"
@str.29 = [49 x i8] c" -minsize n : repeats whose size is at least n\00"
@str.30 = [48 x i8] c" -maxsize n : repeats whose size is at most n\00"
@str.31 = [51 x i8] c" -minperiod n : repeats whose period is at least n\00"
@str.32 = [50 x i8] c" -maxperiod n : repeats whose period is at most n\00"
@str.33 = [53 x i8] c" -exp x : repeats whose exponent is at least x\00"
@str.34 = [62 x i8] c" -allowsmall : output small repeats that can occur randomly\0A\00"
@str.35 = [71 x i8] c" -win n : process by sliding windows of size 2*n overlaping by n\00"
@str.36 = [29 x i8] c" -version : show version\00"
@str.37 = [53 x i8] c" -xmloutput <file> : outputs to <file> in xml format\00"
@str.38 = [75 x i8] c" -noprint : if specified, the repetition sequences will not be output \00"
@str.39 = [10 x i8] c"\0AExample:\00"
@str.40 = [58 x i8] c"mreps -res 3 -exp 3.0 -from 10000 -to 12000 ecolim52.fas\0A\00"
define void @help() {
%1 = tail call i32 @puts(i8* dereferenceable(1) getelementptr inbounds ([7 x i8], [7 x i8]* @str, i64 0, i64 0))
%2 = tail call i32 @puts(i8* dereferenceable(1) getelementptr inbounds ([62 x i8], [62 x i8]* @str.21, i64 0, i64 0))
%3 = tail call i32 @puts(i8* dereferenceable(1) getelementptr inbounds ([54 x i8], [54 x i8]* @str.22, i64 0, i64 0))
%4 = tail call i32 @puts(i8* dereferenceable(1) getelementptr inbounds ([18 x i8], [18 x i8]* @str.23, i64 0, i64 0))
%5 = tail call i32 @puts(i8* dereferenceable(1) getelementptr inbounds ([55 x i8], [55 x i8]* @str.24, i64 0, i64 0))
%6 = tail call i32 @puts(i8* dereferenceable(1) getelementptr inbounds ([55 x i8], [55 x i8]* @str.25, i64 0, i64 0))
%7 = tail call i32 @puts(i8* dereferenceable(1) getelementptr inbounds ([43 x i8], [43 x i8]* @str.26, i64 0, i64 0))
%8 = tail call i32 @puts(i8* dereferenceable(1) getelementptr inbounds ([36 x i8], [36 x i8]* @str.27, i64 0, i64 0))
%9 = tail call i32 @puts(i8* dereferenceable(1) getelementptr inbounds ([31 x i8], [31 x i8]* @str.28, i64 0, i64 0))
%10 = tail call i32 @puts(i8* dereferenceable(1) getelementptr inbounds ([49 x i8], [49 x i8]* @str.29, i64 0, i64 0))
%11 = tail call i32 @puts(i8* dereferenceable(1) getelementptr inbounds ([48 x i8], [48 x i8]* @str.30, i64 0, i64 0))
%12 = tail call i32 @puts(i8* dereferenceable(1) getelementptr inbounds ([51 x i8], [51 x i8]* @str.31, i64 0, i64 0))
%13 = tail call i32 @puts(i8* dereferenceable(1) getelementptr inbounds ([50 x i8], [50 x i8]* @str.32, i64 0, i64 0))
%14 = tail call i32 @puts(i8* dereferenceable(1) getelementptr inbounds ([53 x i8], [53 x i8]* @str.33, i64 0, i64 0))
%15 = tail call i32 @puts(i8* dereferenceable(1) getelementptr inbounds ([62 x i8], [62 x i8]* @str.34, i64 0, i64 0))
%16 = tail call i32 @puts(i8* dereferenceable(1) getelementptr inbounds ([71 x i8], [71 x i8]* @str.35, i64 0, i64 0))
%17 = tail call i32 @puts(i8* dereferenceable(1) getelementptr inbounds ([29 x i8], [29 x i8]* @str.36, i64 0, i64 0))
%18 = tail call i32 @puts(i8* dereferenceable(1) getelementptr inbounds ([53 x i8], [53 x i8]* @str.37, i64 0, i64 0))
%19 = tail call i32 @puts(i8* dereferenceable(1) getelementptr inbounds ([75 x i8], [75 x i8]* @str.38, i64 0, i64 0))
%20 = tail call i32 @puts(i8* dereferenceable(1) getelementptr inbounds ([10 x i8], [10 x i8]* @str.39, i64 0, i64 0))
%21 = tail call i32 @puts(i8* dereferenceable(1) getelementptr inbounds ([58 x i8], [58 x i8]* @str.40, i64 0, i64 0))
%22 = tail call i32 @exit(i32 0)
unreachable
}