Initial Commit

.gitattributes

@@ -53,3 +53,8 @@ saved_model/**/* filter=lfs diff=lfs merge=lfs -text
 *.jpg filter=lfs diff=lfs merge=lfs -text
 *.jpeg filter=lfs diff=lfs merge=lfs -text
 *.webp filter=lfs diff=lfs merge=lfs -text
+mimic_iii_db/CHARTEVENTS.csv filter=lfs diff=lfs merge=lfs -text
+mimic_iii_db/COST.csv filter=lfs diff=lfs merge=lfs -text
+mimic_iii_db/LABEVENTS.csv filter=lfs diff=lfs merge=lfs -text
+mimic_iii_db/mimic_iii.db filter=lfs diff=lfs merge=lfs -text
+train_raw.json filter=lfs diff=lfs merge=lfs -text

mimic_iii_db/CHARTEVENTS.csv

@@ -0,0 +1,3 @@
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+size 13819904

mimic_iii_db/COST.csv

@@ -0,0 +1,3 @@
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mimic_iii_db/D_LABITEMS.csv

@@ -0,0 +1,754 @@
+ROW_ID,ITEMID,LABEL
+0,51346,blasts
+1,51347,eosinophils
+2,51348,"hematocrit, csf"
+3,51349,hypersegmented neutrophils
+4,51350,immunophenotyping
+5,51351,lymphs
+6,51352,macrophage
+7,51353,mesothelial cells
+8,51354,metamyelocytes
+9,51355,monocytes
+10,51356,myelocytes
+11,51357,nrbc
+12,51358,other
+13,51359,plasma
+14,51360,polys
+15,51361,promyelocytes
+16,51362,"rbc, csf"
+17,51363,"wbc, csf"
+18,51364,young
+19,51365,atypical lymphocytes
+20,51366,bands
+21,51367,basophils
+22,51368,eosinophils
+23,51369,"hematocrit, joint fluid"
+24,51370,"joint crystals, birefringence"
+25,51371,"joint crystals, comment"
+26,51372,"joint crystals, location"
+27,51373,"joint crystals, number"
+28,51374,"joint crystals, shape"
+29,51375,lymphocytes
+30,51376,macrophage
+31,51377,mesothelial cells
+32,51378,metamyelocytes
+33,51379,monocytes
+34,51380,nrbc
+35,51381,other
+36,51382,polys
+37,51383,"rbc, joint fluid"
+38,51384,"wbc, joint fluid"
+39,51385,atypical lymphocytes
+40,51386,bands
+41,51387,basophils
+42,51388,cd10
+43,51389,cd103
+44,51390,cd117
+45,51391,cd11c
+46,51392,cd13
+47,51393,cd138
+48,51394,cd14
+49,51395,cd15
+50,51396,cd16
+51,51397,cd16/56
+52,51398,cd19
+53,51399,cd2
+54,51400,cd20
+55,51401,cd22
+56,51402,cd23
+57,51403,cd25
+58,51404,cd3
+59,51405,cd33
+60,51406,cd34
+61,51407,cd38
+62,51408,cd4
+63,51409,cd4/cd8 ratio
+64,51410,cd41
+65,51411,cd45
+66,51412,cd5
+67,51413,cd56
+68,51414,cd57
+69,51415,cd64
+70,51416,cd7
+71,51417,cd71
+72,51418,cd8
+73,51419,eosinophils
+74,51420,fmc-7
+75,51421,glyco a
+76,51422,"hematocrit, other fluid"
+77,51423,hla-dr
+78,51424,immunophenotyping
+79,51425,kappa
+80,51426,lambda
+81,51427,lymphocytes
+82,51428,macrophage
+83,51429,mesothelial cells
+84,51430,metamyelocytes
+85,51431,monos
+86,51432,myelocytes
+87,51433,nrbc
+88,51434,other cell
+89,51435,plasma
+90,51436,polys
+91,51437,promyelocytes
+92,51438,"rbc, other fluid"
+93,51439,"wbc, other fluid"
+94,51440,atypical lymphocytes
+95,51441,bands
+96,51442,basophils
+97,51443,blasts
+98,51444,eosinophils
+99,51445,"hematocrit, pleural"
+100,51446,lymphocytes
+101,51447,macrophages
+102,51448,mesothelial cells
+103,51449,metamyelocytes
+104,51450,monos
+105,51451,myelocytes
+106,51452,nrbc
+107,51453,other
+108,51454,plasma cells
+109,51455,polys
+110,51456,promyelocytes
+111,51457,"rbc, pleural"
+112,51458,"wbc, pleural"
+113,51459,young cells
+114,51460,"blood, occult"
+115,51461,ammonium biurate
+116,51462,amorphous crystals
+117,51463,bacteria
+118,51464,bilirubin
+119,51465,bilirubin crystals
+120,51466,blood
+121,51467,broad casts
+122,51468,calcium carbonate crystals
+123,51469,calcium oxalate crystals
+124,51470,calcium phosphate crystals
+125,51471,cellular cast
+126,51472,cholesterol crystals
+127,50800,specimen type
+128,50801,alveolar-arterial gradient
+129,50802,base excess
+130,50803,"calculated bicarbonate, whole blood"
+131,50804,calculated total co2
+132,50805,carboxyhemoglobin
+133,50806,"chloride, whole blood"
+134,50807,comments
+135,50808,free calcium
+136,50809,glucose
+137,50810,"hematocrit, calculated"
+138,50811,hemoglobin
+139,50812,intubated
+140,50813,lactate
+141,50814,methemoglobin
+142,50815,o2 flow
+143,50816,oxygen
+144,50817,oxygen saturation
+145,50818,pco2
+146,50819,peep
+147,50820,ph
+148,50821,po2
+149,50822,"potassium, whole blood"
+150,50823,required o2
+151,50824,"sodium, whole blood"
+152,50825,temperature
+153,50826,tidal volume
+154,50827,ventilation rate
+155,50828,ventilator
+156,50829,fluid type
+157,50830,"pco2, body fluid"
+158,50831,ph
+159,50832,"po2, body fluid"
+160,50833,potassium
+161,50834,"sodium, body fluid"
+162,50835,"albumin, ascites"
+163,50836,"amylase, ascites"
+164,50837,"bicarbonate, ascites"
+165,50838,"bilirubin, total, ascites"
+166,50839,"chloride, ascites"
+167,50840,"cholesterol, ascites"
+168,50841,"creatinine, ascites"
+169,50842,"glucose, ascites"
+170,50843,"lactate dehydrogenase, ascites"
+171,50844,"lipase, ascites"
+172,50845,"miscellaneous, ascites"
+173,50846,"osmolality, ascites"
+174,50847,"potassium, ascites"
+175,50848,"sodium, ascites"
+176,50849,"total protein, ascites"
+177,50850,"triglycerides, ascites"
+178,50851,"urea nitrogen, ascites"
+179,50852,% hemoglobin a1c
+180,50853,25-oh vitamin d
+181,50854,absolute a1c
+182,50855,absolute hemoglobin
+183,50856,acetaminophen
+184,50857,acetone
+185,50858,acid phosphatase
+186,50859,"acid phosphatase, non-prostatic"
+187,50860,"afp, maternal screen"
+188,50861,alanine aminotransferase (alt)
+189,50862,albumin
+190,50863,alkaline phosphatase
+191,50864,alpha-fetoprotein
+192,50865,amikacin
+193,50866,ammonia
+194,50867,amylase
+195,50868,anion gap
+196,50869,anti-dgp (iga/igg)
+197,50870,"anti-gliadin antibody, iga"
+198,50871,anti-mitochondrial antibody
+199,50872,anti-neutrophil cytoplasmic antibody
+200,50873,anti-nuclear antibody
+201,50874,"anti-nuclear antibody, titer"
+202,50875,anti-parietal cell antibody
+203,50876,anti-smooth muscle antibody
+204,50877,anti-thyroglobulin antibodies
+205,50878,asparate aminotransferase (ast)
+206,50879,barbiturate screen
+207,50880,benzodiazepine screen
+208,50881,beta-2 microglobulin
+209,50882,bicarbonate
+210,50883,"bilirubin, direct"
+211,50884,"bilirubin, indirect"
+212,50885,"bilirubin, total"
+213,50886,blood culture hold
+214,50887,blue top hold
+215,50888,blue top hold frozen
+216,50889,c-reactive protein
+217,50890,c3
+218,50891,c4
+219,50892,ca-125
+220,50893,"calcium, total"
+221,50894,calculated free testosterone
+222,50895,calculated tbg
+223,50896,calculated thyroxine (t4) index
+224,50897,call
+225,50898,cancer antigen 27.29
+226,50899,carbamazepine
+227,50900,carcinoembyronic antigen (cea)
+228,50901,centromere
+229,50902,chloride
+230,50903,cholesterol ratio (total/hdl)
+231,50904,"cholesterol, hdl"
+232,50905,"cholesterol, ldl, calculated"
+233,50906,"cholesterol, ldl, measured"
+234,50907,"cholesterol, total"
+235,50908,ck-mb index
+236,50909,cortisol
+237,50910,creatine kinase (ck)
+238,50911,"creatine kinase, mb isoenzyme"
+239,50912,creatinine
+240,50913,cryoglobulin
+241,50914,cyclosporin
+242,50915,d-dimer
+243,50916,dhea-sulfate
+244,50917,digoxin
+245,50918,double stranded dna
+246,50919,edta hold
+247,50920,estimated gfr (mdrd equation)
+248,50921,estradiol
+249,50922,ethanol
+250,50923,fax
+251,50924,ferritin
+252,50925,folate
+253,50926,follicle stimulating hormone
+254,50927,gamma glutamyltransferase
+255,50928,gastrin
+256,50929,gentamicin
+257,50930,globulin
+258,50931,glucose
+259,50932,gray top hold (plasma)
+260,50933,green top hold (plasma)
+261,50934,h
+262,50935,haptoglobin
+263,50936,"hcg, maternal screen"
+264,50937,hepatitis a virus antibody
+265,50938,hepatitis a virus igm antibody
+266,50939,"hepatitis b core antibody, igm"
+267,50940,hepatitis b surface antibody
+268,50941,hepatitis b surface antigen
+269,50942,hepatitis b virus core antibody
+270,50943,hepatitis c virus antibody
+271,50944,hiv antibody
+272,50945,homocysteine
+273,50946,human chorionic gonadotropin
+274,50947,i
+275,50948,immunofixation
+276,50949,immunoglobulin a
+277,50950,immunoglobulin g
+278,50951,immunoglobulin m
+279,50952,iron
+280,50953,"iron binding capacity, total"
+281,50954,lactate dehydrogenase (ld)
+282,50955,light green top hold
+283,50956,lipase
+284,50957,lithium
+285,50958,luteinizing hormone
+286,50959,macro prolactin
+287,50960,magnesium
+288,50961,methotrexate
+289,50962,n-acetylprocainamide (napa)
+290,50963,ntprobnp
+291,50964,"osmolality, measured"
+292,50965,parathyroid hormone
+293,50966,phenobarbital
+294,50967,phenytoin
+295,50968,"phenytoin, free"
+296,50969,"phenytoin, percent free"
+297,50970,phosphate
+298,50971,potassium
+299,50972,procainamide
+300,50973,prolactin
+301,50974,prostate specific antigen
+302,50975,protein electrophoresis
+303,50976,"protein, total"
+304,50977,quinidine
+305,50978,rapamycin
+306,50979,red top hold
+307,50980,rheumatoid factor
+308,50981,salicylate
+309,50982,sex hormone binding globulin
+310,50983,sodium
+311,50984,stat
+312,50985,study tubes
+313,50986,tacrofk
+314,50988,testosterone
+315,50989,"testosterone, free"
+316,50990,theophylline
+317,50991,thyroglobulin
+318,50992,thyroid peroxidase antibodies
+319,50993,thyroid stimulating hormone
+320,50994,thyroxine (t4)
+321,50995,"thyroxine (t4), free"
+322,50996,"tissue transglutaminase ab, iga"
+323,50997,tobramycin
+324,50998,transferrin
+325,50999,tricyclic antidepressant screen
+326,51000,triglycerides
+327,51001,triiodothyronine (t3)
+328,51002,troponin i
+329,51003,troponin t
+330,51004,"ue3, maternal screen"
+331,51005,uptake ratio
+332,51006,urea nitrogen
+333,51007,uric acid
+334,51008,valproic acid
+335,51009,vancomycin
+336,51010,vitamin b12
+337,51011,<albumin>
+338,51012,"bilirubin, total, csf"
+339,51013,"chloride, csf"
+340,51014,"glucose, csf"
+341,51015,"lactate dehydrogenase, csf"
+342,51016,"miscellaneous, csf"
+343,51017,"pep, csf"
+344,51018,"total protein, csf"
+345,51019,"albumin, joint fluid"
+346,51020,"amylase, joint fluid"
+347,51021,"creatinine, joint fluid"
+348,51022,"glucose, joint fluid"
+349,51023,"ld, joint fluid"
+350,51024,"total protein, joint fluid"
+351,51025,"albumin, body fluid"
+352,51026,"amylase, body fluid"
+353,51027,"bicarbonate, other fluid"
+354,51028,"bilirubin, total, body fluid"
+355,51029,"calcium, body fluid"
+356,51030,"chloride, body fluid"
+357,51031,"cholesterol, body fluid"
+358,51032,"creatinine, body fluid"
+359,51033,fetalfn
+360,51034,"glucose, body fluid"
+361,51035,"ld, body fluid"
+362,51036,"lipase, body fluid"
+363,51037,"magnesium, body fluid"
+364,51038,"miscellaneous, body fluid"
+365,51039,"osmolality, body fluid"
+366,51040,"phosphate, body fluid"
+367,51041,"potassium, body fluid"
+368,51042,"sodium, body fluid"
+369,51043,"total protein, body fluid"
+370,51044,triglycer
+371,51045,"urea nitrogen, body fluid"
+372,51046,"albumin, pleural"
+373,51047,"amylase, pleural"
+374,51048,"bicarbonate, pleural"
+375,51049,"bilirubin, total, pleural"
+376,51050,"chloride, pleural"
+377,51051,"cholesterol, pleural"
+378,51052,"creatinine, pleural"
+379,51053,"glucose, pleural"
+380,51054,"lactate dehydrogenase, pleural"
+381,51055,"lipase, pleural"
+382,51056,"miscellaneous, pleural"
+383,51057,"potassium, pleural"
+384,51058,"sodium, pleural"
+385,51059,"total protein, pleural"
+386,51060,"triglycerides, pleural"
+387,51061,"bicarbonate, stool"
+388,51062,"chloride, stool"
+389,51063,"osmolality, stool"
+390,51064,"potassium, stool"
+391,51065,"sodium, stool"
+392,51066,24 hr calcium
+393,51067,24 hr creatinine
+394,51068,24 hr protein
+395,51069,"albumin, urine"
+396,51070,"albumin/creatinine, urine"
+397,51071,"amphetamine screen, urine"
+398,51072,"amylase, urine"
+399,51073,"amylase/creatinine ratio, urine"
+400,51074,"barbiturate screen, urine"
+401,51075,"benzodiazepine screen, urine"
+402,51076,"bicarbonate, urine"
+403,51077,"calcium, urine"
+404,51078,"chloride, urine"
+405,51079,"cocaine, urine"
+406,51080,creatinine clearance
+407,51081,"creatinine, serum"
+408,51082,"creatinine, urine"
+409,51083,"ethanol, urine"
+410,51084,"glucose, urine"
+411,51085,"hcg, urine, qualitative"
+412,51086,"immunofixation, urine"
+413,51087,length of urine collection
+414,51088,"magnesium, urine"
+415,51089,marijuana
+416,51090,"methadone, urine"
+417,51091,"myoglobin, urine"
+418,51092,"opiate screen, urine"
+419,51093,"osmolality, urine"
+420,51094,ph
+421,51095,"phosphate, urine"
+422,51096,porphobilinogen screen
+423,51097,"potassium, urine"
+424,51098,"prot. electrophoresis, urine"
+425,51099,protein/creatinine ratio
+426,51100,"sodium, urine"
+427,51101,total collection time
+428,51102,"total protein, urine"
+429,51103,uhold
+430,51104,"urea nitrogen, urine"
+431,51105,"uric acid, urine"
+432,51106,urine creatinine
+433,51107,"urine tube, held"
+434,51108,urine volume
+435,51109,"urine volume, total"
+436,51110,atypical lymphocytes
+437,51111,bands
+438,51112,basophils
+439,51113,blasts
+440,51114,eosinophils
+441,51115,"hematocrit, ascites"
+442,51116,lymphocytes
+443,51117,macrophage
+444,51118,mesothelial cell
+445,51119,metamyelocytes
+446,51120,monocytes
+447,51121,myelocytes
+448,51122,nucleated rbc
+449,51123,other
+450,51124,plasma
+451,51125,polys
+452,51126,promyelocytes
+453,51127,"rbc, ascites"
+454,51128,"wbc, ascites"
+455,51129,young
+456,51130,absolute cd3 count
+457,51131,absolute cd4 count
+458,51132,absolute cd8 count
+459,51133,absolute lymphocyte count
+460,51134,acanthocytes
+461,51135,adp
+462,51136,alpha antiplasmin
+463,51137,anisocytosis
+464,51138,anticardiolipin antibody igg
+465,51139,anticardiolipin antibody igm
+466,51140,antithrombin
+467,51141,apt test
+468,51142,arachadonic acid
+469,51143,atypical lymphocytes
+470,51144,bands
+471,51145,basophilic stippling
+472,51146,basophils
+473,51147,bite cells
+474,51148,blasts
+475,51149,bleeding time
+476,51150,blood parasite smear
+477,51151,burr cells
+478,51152,cd10
+479,51153,cd103
+480,51154,cd117
+481,51155,cd11c
+482,51156,cd13
+483,51157,cd138
+484,51158,cd14
+485,51159,cd15
+486,51160,cd16/56
+487,51161,cd16
+488,51162,cd16/56 absolute count
+489,51163,cd16/56%
+490,51164,cd19
+491,51165,cd19 %
+492,51166,cd19 absolute count
+493,51167,cd2
+494,51168,cd20
+495,51169,cd20 %
+496,51170,cd20 absolute count
+497,51171,cd22
+498,51172,cd23
+499,51173,cd25
+500,51174,cd3 %
+501,51175,cd3 absolute count
+502,51176,"cd3 cells, percent"
+503,51177,cd33
+504,51178,cd34
+505,51179,cd38
+506,51180,"cd4 cells, percent"
+507,51181,cd4/cd8 ratio
+508,51182,cd41
+509,51183,cd45
+510,51184,cd5
+511,51185,cd5 %
+512,51186,cd5 absolute count
+513,51187,cd55
+514,51188,cd56
+515,51189,cd57
+516,51190,cd59
+517,51191,cd64
+518,51192,cd7
+519,51193,cd71
+520,51194,"cd8 cells, percent"
+521,51195,collagen
+522,51196,d-dimer
+523,51197,elliptocytes
+524,51198,envelope cells
+525,51199,eosinophil count
+526,51200,eosinophils
+527,51201,epinepherine
+528,51202,factor ii
+529,51203,factor ix
+530,51204,factor v
+531,51205,factor vii
+532,51206,factor viii
+533,51207,factor viii inhibitor
+534,51208,factor x
+535,51209,factor xi
+536,51210,factor xii
+537,51211,factor xiii
+538,51212,fetal hemoglobin
+539,51213,fibrin degradation products
+540,51214,"fibrinogen, functional"
+541,51215,fmc-7
+542,51216,fragmented cells
+543,51217,glyco a
+544,51218,granulocyte count
+545,51219,h/o smear
+546,51220,heinz body prep
+547,51221,hematocrit
+548,51222,hemoglobin
+549,51223,hemoglobin a2
+550,51224,hemoglobin c
+551,51225,hemoglobin f
+552,51226,hemogloblin a
+553,51227,hemogloblin s
+554,51228,heparin
+555,51229,"heparin, lmw"
+556,51230,hla-dr
+557,51231,howell-jolly bodies
+558,51232,hypersegmented neutrophils
+559,51233,hypochromia
+560,51234,immunophenotyping
+561,51235,inhibitor screen
+562,51236,inpatient hematology/oncology smear
+563,51237,inr(pt)
+564,51238,kappa
+565,51239,lambda
+566,51240,large platelets
+567,51241,leukocyte alkaline phosphatase
+568,51242,luc
+569,51243,lupus anticoagulant
+570,51244,lymphocytes
+571,51245,"lymphocytes, percent"
+572,51246,macrocytes
+573,51247,macroovalocytes
+574,51248,mch
+575,51249,mchc
+576,51250,mcv
+577,51251,metamyelocytes
+578,51252,microcytes
+579,51253,monocyte count
+580,51254,monocytes
+581,51255,myelocytes
+582,51256,neutrophils
+583,51257,nucleated red cells
+584,51258,osmotic fragility
+585,51259,other cells
+586,51260,ovalocytes
+587,51261,pappenheimer bodies
+588,51262,pencil cells
+589,51263,plasma cells
+590,51264,platelet clumps
+591,51265,platelet count
+592,51266,platelet smear
+593,51267,poikilocytosis
+594,51268,polychromasia
+595,51269,promyelocytes
+596,51270,"protein c, antigen"
+597,51271,"protein c, functional"
+598,51272,"protein s, antigen"
+599,51273,"protein s, functional"
+600,51274,pt
+601,51275,ptt
+602,51276,quantitative g6pd
+603,51277,rdw
+604,51278,red blood cell fragments
+605,51279,red blood cells
+606,51280,reptilase time
+607,51281,reptilase time control
+608,51282,"reticulocyte count, absolute"
+609,51283,"reticulocyte count, automated"
+610,51284,"reticulocyte count, manual"
+611,51285,"reticulocyte, cellular hemoglobin"
+612,51286,ristocetin
+613,51287,schistocytes
+614,51288,sedimentation rate
+615,51289,serum viscosity
+616,51290,sickle cell preparation
+617,51291,sickle cells
+618,51292,spherocytes
+619,51293,sugar water test
+620,51294,target cells
+621,51295,tdt
+622,51296,teardrop cells
+623,51297,thrombin
+624,51298,von willebrand factor activity
+625,51299,von willebrand factor antigen
+626,51300,wbc count
+627,51301,white blood cells
+628,51302,young cells
+629,51303,cd10
+630,51304,cd103
+631,51305,cd117
+632,51306,cd11c
+633,51307,cd13
+634,51308,cd138
+635,51309,cd14
+636,51310,cd15
+637,51311,cd16
+638,51312,cd16/56
+639,51313,cd19
+640,51314,cd2
+641,51315,cd20
+642,51316,cd22
+643,51317,cd23
+644,51318,cd25
+645,51319,cd3
+646,51320,cd33
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+661,51335,fmc-7
+662,51336,glyco a
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+664,51338,immunophenotyping
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+668,51342,wright giemsa
+669,51343,atypical lymphocytes
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+695,51496,"reducing substances, urine"
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+706,51507,"urine casts, other"
+707,51508,urine color
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+709,51510,"urine crystals, other"
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+713,51514,urobilinogen
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+720,51521,"acid phosphatase, prostatic"
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+730,51531,stdyurine
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+736,51537,tdt
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+748,51551,voided specimen
+749,51552,voided specimen
+750,51553,voided specimen
+751,51554,voided specimen
+752,51555,surfactant albumin ratio

mimic_iii_db/LABEVENTS.csv

@@ -0,0 +1,3 @@
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+oid sha256:8e6e251975567fb2345c508cb10f754ae6692158c6bb66bcda1b149434628c17
+size 21102021

mimic_iii_db/PATIENTS.csv

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mimic_iii_db/mimic_iii.db

@@ -0,0 +1,3 @@
+version https://git-lfs.github.com/spec/v1
+oid sha256:3052b5a549f2f6056d4790c71b9e208631b83be839614af24e38afb964ac3d26
+size 103796736

mimic_iii_db/mimic_iii.sqlite

@@ -0,0 +1,227 @@
+DROP TABLE IF EXISTS PATIENTS;
+CREATE TABLE PATIENTS 
+(
+    ROW_ID INT NOT NULL,
+    SUBJECT_ID INT NOT NULL,
+    GENDER VARCHAR(5) NOT NULL,
+    DOB TIMESTAMP(0) NOT NULL,
+    DOD TIMESTAMP(0),
+    CONSTRAINT pat_subid_unique UNIQUE (SUBJECT_ID),
+    CONSTRAINT pat_rowid_pk PRIMARY KEY (ROW_ID)
+);
+
+DROP TABLE IF EXISTS ADMISSIONS;
+CREATE TABLE ADMISSIONS
+(
+    ROW_ID INT NOT NULL,
+    SUBJECT_ID INT NOT NULL,
+    HADM_ID INT NOT NULL,
+    ADMITTIME TIMESTAMP(0) NOT NULL,
+    DISCHTIME TIMESTAMP(0),
+    ADMISSION_TYPE VARCHAR(50) NOT NULL,
+    ADMISSION_LOCATION VARCHAR(50) NOT NULL,
+    DISCHARGE_LOCATION VARCHAR(50),
+    INSURANCE VARCHAR(255) NOT NULL,
+    LANGUAGE VARCHAR(10),
+    MARITAL_STATUS VARCHAR(50),
+    ETHNICITY VARCHAR(200) NOT NULL,
+    AGE INT NOT NULL,
+    CONSTRAINT adm_hadmid_unique UNIQUE (HADM_ID),
+    CONSTRAINT adm_rowid_pk PRIMARY KEY (ROW_ID)    
+);
+
+DROP TABLE IF EXISTS D_ICD_DIAGNOSES;
+CREATE TABLE D_ICD_DIAGNOSES
+(
+    ROW_ID INT NOT NULL,
+    ICD9_CODE VARCHAR(10) NOT NULL,
+    SHORT_TITLE VARCHAR(50) NOT NULL,
+    LONG_TITLE VARCHAR(255) NOT NULL,
+    CONSTRAINT d_icd_diag_code_unique UNIQUE (ICD9_CODE),
+    CONSTRAINT d_icd_diag_rowid_pk PRIMARY KEY (ROW_ID)
+);
+
+DROP TABLE IF EXISTS D_ICD_PROCEDURES;
+CREATE TABLE D_ICD_PROCEDURES 
+(
+    ROW_ID INT NOT NULL,
+    ICD9_CODE VARCHAR(10) NOT NULL,
+    SHORT_TITLE VARCHAR(50) NOT NULL,
+    LONG_TITLE VARCHAR(255) NOT NULL,
+    CONSTRAINT d_icd_proc_code_unique UNIQUE (ICD9_CODE),
+    CONSTRAINT d_icd_proc_rowid_pk PRIMARY KEY (ROW_ID)
+);
+
+DROP TABLE IF EXISTS D_LABITEMS;
+CREATE TABLE D_LABITEMS 
+(
+    ROW_ID INT NOT NULL,
+    ITEMID INT NOT NULL,
+    LABEL VARCHAR(200) NOT NULL,
+    CONSTRAINT dlabitems_itemid_unique UNIQUE (ITEMID),
+    CONSTRAINT dlabitems_rowid_pk PRIMARY KEY (ROW_ID)
+);
+
+DROP TABLE IF EXISTS D_ITEMS;
+CREATE TABLE D_ITEMS 
+(
+    ROW_ID INT NOT NULL,
+    ITEMID INT NOT NULL,
+    LABEL VARCHAR(200) NOT NULL,
+    LINKSTO VARCHAR(50) NOT NULL,
+    CONSTRAINT ditems_itemid_unique UNIQUE (ITEMID),
+    CONSTRAINT ditems_rowid_pk PRIMARY KEY (ROW_ID)
+);
+
+DROP TABLE IF EXISTS DIAGNOSES_ICD;
+CREATE TABLE DIAGNOSES_ICD
+(
+    ROW_ID INT NOT NULL,
+    SUBJECT_ID INT NOT NULL,
+    HADM_ID INT NOT NULL,
+    ICD9_CODE VARCHAR(10) NOT NULL,
+    CHARTTIME TIMESTAMP(0) NOT NULL,
+    CONSTRAINT diagnosesicd_rowid_unique UNIQUE (ROW_ID)
+    CONSTRAINT diagnosesicd_rowid_pk PRIMARY KEY (ROW_ID)
+);
+
+DROP TABLE IF EXISTS PROCEDURES_ICD;
+CREATE TABLE PROCEDURES_ICD
+(
+    ROW_ID INT NOT NULL,
+    SUBJECT_ID INT NOT NULL,
+    HADM_ID INT NOT NULL,
+    ICD9_CODE VARCHAR(10) NOT NULL,
+    CHARTTIME TIMESTAMP(0) NOT NULL,
+    CONSTRAINT proceduresicd_rowid_unique UNIQUE (ROW_ID),
+    CONSTRAINT proceduresicd_rowid_pk PRIMARY KEY (ROW_ID)
+);
+
+DROP TABLE IF EXISTS LABEVENTS;
+CREATE TABLE LABEVENTS
+(
+    ROW_ID INT NOT NULL,
+    SUBJECT_ID INT NOT NULL,
+    HADM_ID INT NOT NULL,
+    ITEMID INT NOT NULL,
+    CHARTTIME TIMESTAMP(0),
+    VALUENUM DOUBLE PRECISION,
+    VALUEUOM VARCHAR(20),
+    CONSTRAINT labevents_rowid_unuque UNIQUE (ROW_ID),    
+    CONSTRAINT labevents_rowid_pk PRIMARY KEY (ROW_ID)
+);
+
+DROP TABLE IF EXISTS PRESCRIPTIONS;
+CREATE TABLE PRESCRIPTIONS
+(
+    ROW_ID INT NOT NULL,
+    SUBJECT_ID INT NOT NULL,
+    HADM_ID INT NOT NULL,
+    STARTDATE TIMESTAMP(0) NOT NULL,
+    ENDDATE TIMESTAMP(0),
+    DRUG VARCHAR(100) NOT NULL,
+    DOSE_VAL_RX VARCHAR(120) NOT NULL,
+    DOSE_UNIT_RX VARCHAR(120) NOT NULL,
+    ROUTE VARCHAR(120) NOT NULL,
+    CONSTRAINT prescription_rowid_unuque UNIQUE (ROW_ID),    
+    CONSTRAINT prescription_rowid_pk PRIMARY KEY (ROW_ID)
+);
+
+DROP TABLE IF EXISTS COST;
+CREATE TABLE COST
+(
+    ROW_ID INT NOT NULL,
+    SUBJECT_ID INT NOT NULL,
+    HADM_ID INT NOT NULL,
+    EVENT_TYPE VARCHAR(20) NOT NULL,
+    EVENT_ID INT NOT NULL,
+    CHARGETIME TIMESTAMP(0) NOT NULL,
+    COST DOUBLE PRECISION NOT NULL,
+    CONSTRAINT cost_rowid_pk PRIMARY KEY (ROW_ID)
+);
+
+DROP TABLE IF EXISTS CHARTEVENTS;
+CREATE TABLE CHARTEVENTS
+(
+    ROW_ID INT NOT NULL,
+    SUBJECT_ID INT NOT NULL,
+    HADM_ID INT NOT NULL,
+    ICUSTAY_ID INT NOT NULL,
+    ITEMID INT NOT NULL,
+    CHARTTIME TIMESTAMP(0) NOT NULL,
+    VALUENUM DOUBLE PRECISION,
+    VALUEUOM VARCHAR(50),
+    CONSTRAINT chartevents_rowid_pk PRIMARY KEY (ROW_ID)
+);
+
+DROP TABLE IF EXISTS INPUTEVENTS_CV;
+CREATE TABLE INPUTEVENTS_CV
+(
+    ROW_ID INT NOT NULL,
+    SUBJECT_ID INT NOT NULL,
+    HADM_ID INT NOT NULL,
+    ICUSTAY_ID INT NOT NULL,
+    CHARTTIME TIMESTAMP(0) NOT NULL,
+    ITEMID INT NOT NULL,
+    AMOUNT DOUBLE PRECISION,
+    CONSTRAINT inputevents_cv_rowid_pk PRIMARY KEY (ROW_ID)
+);
+
+DROP TABLE IF EXISTS OUTPUTEVENTS;
+CREATE TABLE OUTPUTEVENTS
+(
+    ROW_ID INT NOT NULL,
+    SUBJECT_ID INT NOT NULL,
+    HADM_ID INT NOT NULL,
+    ICUSTAY_ID INT NOT NULL,
+    CHARTTIME TIMESTAMP(0) NOT NULL,
+    ITEMID INT NOT NULL,
+    VALUE DOUBLE PRECISION,
+    CONSTRAINT outputevents_rowid_pk PRIMARY KEY (ROW_ID)
+);
+
+DROP TABLE IF EXISTS MICROBIOLOGYEVENTS;
+CREATE TABLE MICROBIOLOGYEVENTS
+(
+    ROW_ID INT NOT NULL,
+    SUBJECT_ID INT NOT NULL,
+    HADM_ID INT NOT NULL,
+    CHARTTIME TIMESTAMP(0) NOT NULL,
+    SPEC_TYPE_DESC VARCHAR(100),
+    ORG_NAME VARCHAR(100),
+    CONSTRAINT micro_rowid_pk PRIMARY KEY (ROW_ID)
+);
+
+DROP TABLE IF EXISTS ICUSTAYS;
+CREATE TABLE ICUSTAYS
+(
+    ROW_ID INT NOT NULL,
+    SUBJECT_ID INT NOT NULL,
+    HADM_ID INT NOT NULL,
+    ICUSTAY_ID INT NOT NULL,    
+    FIRST_CAREUNIT VARCHAR(20) NOT NULL,
+    LAST_CAREUNIT VARCHAR(20) NOT NULL,
+    FIRST_WARDID SMALLINT NOT NULL,
+    LAST_WARDID SMALLINT NOT NULL,    
+    INTIME TIMESTAMP(0) NOT NULL,
+    OUTTIME TIMESTAMP(0),
+    CONSTRAINT icustay_icustayid_unique UNIQUE (ICUSTAY_ID),
+    CONSTRAINT icustay_rowid_pk PRIMARY KEY (ROW_ID)
+);
+
+DROP TABLE IF EXISTS TRANSFERS;
+CREATE TABLE TRANSFERS
+(
+    ROW_ID INT NOT NULL,
+    SUBJECT_ID INT NOT NULL,
+    HADM_ID INT NOT NULL,
+    ICUSTAY_ID INT,
+    EVENTTYPE VARCHAR(20) NOT NULL,
+    CAREUNIT VARCHAR(20),
+    WARDID SMALLINT,
+    INTIME TIMESTAMP(0) NOT NULL,
+    OUTTIME TIMESTAMP(0),
+    CONSTRAINT transfers_rowid_pk PRIMARY KEY (ROW_ID)
+);
+
+

train_raw.json

@@ -0,0 +1,3 @@
+version https://git-lfs.github.com/spec/v1
+oid sha256:23655f7273c812662567e58033c24294c898d9fb255987a72a8877abef86275a
+size 12247976