# Module:Autovirusbox

require('strict')
local ItalicTitle = require('Module:Italic title')
local p = {} -- functions made public
local l = {} -- internal functions, kept separate  
-- =============================================================================
-- main implements Template:Virusbox; see the documentation of that template
-- for details.
-- =============================================================================  
function p.main
local args
if .args['direct'] == 'yes' then args = .args
else args = :getParent.args end
-- ---------------------------------------------------------------------
-- pick up taxobox parameters from the caller that need to be processed;
-- most are passed on unchanged
-- ---------------------------------------------------------------------
local name = args['name'] or ''
local taxon = args['taxon'] or ''
local parent = args['parent'] or ''
local species = args['species'] or ''
local strain = args['strain'] or ''
local serotype = args['serotype'] or ''
local virus = args['virus'] or ''
local displayParents = args['display_parents'] or '1'
--[[
local authority = args['authority'] or ''
local parentAuthority = args['parent_authority'] or ''
local gParentAuthority = args['grandparent_authority'] or ''
local ggParentAuthority = args['greatgrandparent_authority'] or ''
local gggParentAuthority = args['greatgreatgrandparent_authority'] or ''
local typeGenusAuthority = args['type_genus_authority'] or ''
local subdivision = args['subdivision'] or ''
local subdivisionRanks = args['subdivision_ranks'] or ''
local subdivisionRef = args['subdivision_ref'] or args['subdivision ref'] or ''  
-- ------------------------------------------------------
-- set the taxobox parameters determined by this function
-- ------------------------------------------------------
local autoTaxon, autoTaxonType, infraTaxon, infraTaxonRank, targetTaxon, targetTaxonRank = l.paramChk(, taxon, parent, species, strain, serotype, virus)
-- set default taxobox name/title
local italicsRequired = :expandTemplate{ title = 'Is italic taxon', args = {targetTaxonRank, virus='yes'} } == 'yes' and args["italic_title"] ~= "no"
if name == '' then
if autoTaxonType == 'ERROR' then
name = '<span>ERROR: parameter(s) specifying taxon are incorrect; see documentation</span>'
else
name = targetTaxon
if italicsRequired then
name = "*" .. targetTaxon .. "*"
end
end
end
-- the page name (title) should be italicized if it's the same as the target taxon and that is italicized
local currentPage = mw.title.getCurrentTitle
local pagename = currentPage.text
if pagename == targetTaxon then
if italicsRequired then ItalicTitle._main({}) end
end
-- is the auto-taxon name bold or linked (i.e. will it be the last row in the taxobox or not)?
local boldFirst = 'bold'
if autoTaxonType == 'PARENT' then boldFirst = 'link' end
-- italicize and link species name, or embolden if nothing below
if species ~= '' then
if infraTaxon ~= '' then
species = "*"..species.."*"
else
species = "***"..species.."***"
end
end
-- embolden lowest rank
if infraTaxon ~= '' then
infraTaxon = "**"..infraTaxon.."**"
end
-- set offset and fix display_parents if there are ranks below autoTaxon
local offset = 0
if infraTaxon ~= '' then offset = offset + 1 end
if species ~= '' then offset = offset + 1 end
if offset ~= 0 then
displayParents = tostring(tonumber(displayParents) - offset)
end
-- fill in a missing subdivision_ranks parameter
if subdivision ~= * and subdivisionRanks == * then
subdivisionRanks = :expandTemplate{ title = 'Children rank', args = {targetTaxonRank} }
end
-- ------------------------------------------------
-- now call Taxobox/core with all of its parameters
-- ------------------------------------------------
local res = :expandTemplate{ title = 'Taxobox/core', args =
{ ['edit link'] = 'e',
virus = 'yes',
colour = :expandTemplate{ title = 'Taxobox colour', args = { 'virus' } },
name = name,
parent = autoTaxon,
bold_first = boldFirst,
---
authority = authority,
parent_authority = parentAuthority,
grandparent_authority = gparentAuthority,
grandparent_authority = gparentAuthority,
greatgrandparent_authority = ggparentAuthority,
greatgreatgrandparent_authority = gggparentAuthority,
offset = tostring(offset),  
image = args['image'] or '',
image_upright = args['image_upright'] or '',
image_alt = args['image_alt'] or '',
image_caption = args['image_caption'] or '',
image2 = args['image2'] or '',
image2_upright = args['image2_upright'] or '',
image2_alt = args['image2_alt'] or '',
image2_caption = args['image2_caption'] or '',
species = species,
virus_infrasp = infraTaxon,
virus_infrasp_rank = infraTaxonRank,
display_taxa = displayParents,
type_genus = args['type_genus'] or '',
--type_genus_authority = args['type_genus_authority'] or '',
--type_species = args['type_species'] or '',
--type_species_authority = args['type_species_authority'] or ''
subdivision_ranks = subdivisionRanks,
subdivision_ref = subdivisionRef,
subdivision = subdivision,
type_strain = args['type_strain'] or '',
synonyms = args['synonyms'] or '',
synonyms_ref = args['synonyms_ref'] or '',
range_map = args['range_map'] or '',
range_map_upright = args['range_map_upright'] or '',
range_map_alt = args['range_map_alt'] or '',
range_map_caption = args['range_map_caption'] or '',
} }
-- put page in error-tracking category if required
if autoTaxonType == 'ERROR' then
res = res .. :expandTemplate{ title = 'Main other', args = {''} }
end
return res
end  
-- =============================================================================
-- paramChk checks the taxon-specifying parameters for consistency, selecting
-- the target taxon (the taxon that is the target of the taxobox), the
-- infra-taxon (the taxon below species level), if any, and the 'auto-taxon',
-- the taxon that is the entry point into the automated taxobox system.
-- =============================================================================  
function l.paramChk(, taxon, parent, species, strain, serotype, virus)
-- set target taxon and infra-taxon
local infraTaxon = ''
local infraTaxonRank = ''
local targetTaxon
local targetTaxonRank
if strain ~= '' then
infraTaxon = strain
infraTaxonRank = 'strain'
targetTaxon = infraTaxon
targetTaxonRank = infraTaxonRank
elseif serotype ~= '' then
infraTaxon = serotype
infraTaxonRank = 'serotype'
targetTaxon = infraTaxon
targetTaxonRank = infraTaxonRank
elseif virus ~= '' then
infraTaxon = virus
infraTaxonRank = 'virus'
targetTaxon = infraTaxon
targetTaxonRank = infraTaxonRank
elseif species ~= '' then
targetTaxon = species
targetTaxonRank = 'species'
else
targetTaxon = taxon
targetTaxonRank = :expandTemplate{ title = 'Taxon info', args = {targetTaxon, 'rank' } }
end
-- set the autotaxon (entry into the automated taxobox system) if the
-- parameters are valid; the default is invalid
local autoTaxon = ''
local autoTaxonType = 'ERROR'
if taxon ~= '' then
if parent..species..infraTaxon == '' then
autoTaxon = taxon
autoTaxonType = 'TAXON'
end
elseif parent ~= * and (species ~=* or infraTaxon ~= '') then
autoTaxon = parent
autoTaxonType = 'PARENT'
end
-- check for multiple infra-taxa
-- This is not this module's limitation: go blame Template:Taxobox/core!
local count = 0
if strain ~= '' then count = count + 1 end
if serotype ~= '' then count = count + 1 end
if virus ~= '' then count = count + 1 end
if count > 1 then autoTaxonType = 'ERROR' end
return autoTaxon, autoTaxonType, infraTaxon, infraTaxonRank, targetTaxon, targetTaxonRank
end  
return p