The novel coronavirus (SARS-CoV-2) has led to a pandemic. Due to its highly contagious nature, it has spread rapidly, resulting in major disruption to public health. In addition, it has also had a severe negative impact on the world economy. As a result, it is widely recognized now that widespread testing is key to containing the spread of the disease and opening up the economy. However, the current testing regime  has been unable to keep up with testing demands  . Hence, there is a need for an alternative approach for repeated large-scale testing of  COVID-19. The emergence of wearable medical sensors (WMSs) and novel machine learning methods, such as deep neural networks (DNNs), points to a promising approach to address this challenge. WMSs enable continuous and user-transparent monitoring of the physiological signals. However, disease detection based on WMSs/DNNs and their deployment on resource-constrained edge devices remain challenging problems. In this work, we propose CovidDeep, a framework that combines efficient DNNs with commercially available WMSs for pervasive testing of the coronavirus . We collected data from 87 individuals, spanning four cohorts including healthy, asymptomatic (but SARS-CoV-2-positive) as well as moderately and severely symptomatic COVID-19 patients. We trained DNNs on various subsets of the features  extracted from six WMS and questionnaire categories to perform ablation studies to determine which subsets are most efficacious in terms of test accuracy for a four-way classification. The highest test accuracy obtained was 99.4\%. Since different WMS subsets may be more accessible (in terms of cost, availability, etc.) to different sets of people, we hope these DNN models will provide users with ample flexibility. The resultant DNNs can be easily deployed on edge devices, e.g., smartwatch or smartphone, which also has the benefit of preserving patient privacy .
The novel coronavirus (SARS-CoV-2) has led to a pandemic. The current testing regime based on Reverse Transcription-Polymerase Chain Reaction for SARS-CoV-2 has been unable to keep up with testing demands , and also suffers from a relatively low positive detection rate in the early stages of the resultant COVID-19 disease . Hence, there is a need for an alternative approach for repeated large-scale testing of SARS-CoV-2/ COVID-19. We propose a framework called CovidDeep that combines efficient DNNs with commercially available WMSs for pervasive testing of the virus . We collected data from 87 individuals, spanning three cohorts including healthy, asymptomatic , and symptomatic patients. We trained DNNs on various subsets of the features automatically extracted from six WMS and questionnaire categories to perform ablation studies to determine which subsets are most efficacious in terms of test accuracy for a three-way classification. The highest test accuracy obtained was 98.1\%. We also augmented the real training dataset with a synthetic training dataset drawn from the same probability distribution to impose a prior on DNN weights and leveraged a grow-and-prune synthesis paradigm to learn both DNN architecture and weights. This boosted the accuracy of the various DNNs further and simultaneously reduced their size and floating-point operations .
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Due to its highly contagious nature, it has spread rapidly, resulting in major disruption to public health. In addition, it has also had a severe negative impact on the world economy. As a result, it is widely recognized now that widespread testing is key to containing the spread of the disease and opening up the economy. However, the
The
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based on Reverse Transcription-Polymerase Chain Reaction for SARS-CoV-2
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, and also suffers from a relatively low positive detection rate in the early stages of the resultant COVID-19 disease
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SARS-CoV-2/
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The emergence of wearable medical sensors (WMSs) and novel machine learning methods, such as deep neural networks (DNNs), points to a promising approach to address this challenge. WMSs enable continuous and user-transparent monitoring of the physiological signals. However, disease detection based on WMSs/DNNs and their deployment on resource-constrained edge devices remain challenging problems. In this work, we propose CovidDeep, a framework
We propose a framework called CovidDeep
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coronavirus
virus
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four
three
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(but SARS-CoV-2-positive) as well as moderately and severely symptomatic COVID-19
, and symptomatic
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automatically
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four-way
three-way
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99.4\%. Since different WMS subsets may be more accessible (in terms of cost, availability, etc.) to different sets of people, we hope these DNN models will provide users with ample flexibility. The resultant DNNs can be easily deployed on edge devices, e.g., smartwatch or smartphone, which also has the benefit of preserving patient privacy
98.1\%. We also augmented the real training dataset with a synthetic training dataset drawn from the same probability distribution to impose a prior on DNN weights and leveraged a grow-and-prune synthesis paradigm to learn both DNN architecture and weights. This boosted the accuracy of the various DNNs further and simultaneously reduced their size and floating-point operations