wanglab/gogpt-training-data huggingface dataset:
Protein: Alpha-actinin-1 (Alpha-actinin cytoskeletal isoform) (F-actin cross-linking protein) (Non-muscle alpha-actinin-1) (P12814)
Organism: Homo sapiens (Human)
Function: F-actin cross-linking protein which is thought to anchor actin to a variety of intracellular structures. This is a bundling protein.
Subcellular location: Cytoplasm, cytoskeleton {ECO:0000269|PubMed:24069336, ECO:0000269|PubMed:7750553}. Cytoplasm, myofibril, sarcomere, Z line {ECO:0000269|PubMed:7750553}. Cell membrane {ECO:0000269|PubMed:22689882}. Cell junction {ECO:0000250|UniProtKB:Q9Z1P2}. Cell projection, ruffle {ECO:0000250|UniProtKB:Q7TPR4}. Note=Colocalizes with MYOZ2 and PPP3CA at the Z-line of heart and skeletal muscle. Colocalizes with PSD in membrane ruffles and central reticular structures. {ECO:0000250|UniProtKB:Q7TPR4}.
Interaction partners:
- Vinculin
- Alpha-actinin-4
- Zyxin
- Actin, cytoplasmic 1
- Integrin beta-1
- Catenin alpha-1
- Actin, cytoplasmic 2
- PDZ and LIM domain protein 1
- Integrin alpha-5
- Beta-parvin
Sequence:
MDHYDSQQTNDYMQPEEDWDRDLLLDPAWEKQQRKTFTAWCNSHLRKAGTQIENIEEDFRDGLKLMLLLEVISGERLAKPERGKMRVHKISNVNKALDFIASKGVKLVSIGAEEIVDGNVKMTLGMIWTIILRFAIQDISVEETSAKEGLLLWCQRKTAPYKNVNIQNFHISWKDGLGFCALIHRHRPELIDYGKLRKDDPLTNLNTAFDVAEKYLDIPKMLDAEDIVGTARPDEKAIMTYVSSFYHAFSGAQKAETAANRICKVLAVNQENEQLMEDYEKLASDLLEWIRRTIPWLENRVPENTMHAMQQKLEDFRDYRRLHKPPKVQEKCQLEINFNTLQTKLRLSNRPAFMPSEGRMVSDINNAWGCLEQVEKGYEEWLLNEIRRLERLDHLAEKFRQKASIHEAWTDGKEAMLRQKDYETATLSEIKALLKKHEAFESDLAAHQDRVEQIAAIAQELNELDYYDSPSVNARCQKICDQWDNLGALTQKRREALERTEKLLETIDQLYLEYAKRAAPFNNWMEGAMEDLQDTFIVHTIEEIQGLTTAHEQFKATLPDADKERLAILGIHNEVSKIVQTYHVNMAGTNPYTTITPQEINGKWDHVRQLVPRRDQALTEEHARQQHNERLRKQFGAQANVIGPWIQTKMEEIGRISIEMHGTLEDQLSHLRQYEKSIVNYKPKIDQLEGDHQLIQEALIFDNKHTNYTMEHIRVGWEQLLTTIARTINEVENQILTRDAKGISQEQMNEFRASFNHFDRDHSGTLGPEEFKACLISLGYDIGNDPQGEAEFARIMSIVDPNRLGVVTFQAFIDFMSRETADTDTADQVMASFKILAGDKNYITMDELRRELPPDQAEYCIARMAPYTGPDSVPGALDYMSFSTALYGESDL
Protein: High-affinity choline transporter 1 (Q8UWF0)
Organism: Torpedo marmorata (Marbled electric ray)
Function: Imports choline from the extracellular space to the neuron with high affinity. Rate-limiting step in acetylcholine synthesis. Sodium ion and chloride ion dependent.
Subcellular location: Membrane {ECO:0000250}; Multi-pass membrane protein {ECO:0000250}.
Interaction partners:
Sequence:
MTVHIDGIVAIVLFYLLILFVGLWAAWKSKNTSMEGAMDRSEAIMIGGRDIGLLVGGFTMTATWVGGGYINGTAEAVYVPGYGLAWAQAPFGYALSLVIGGLFFAKPMRSRGYVTMLDPFQQMYGKRMGGLLFIPALLGEIFWSAAILSALGATLSVIVDININVSVVVSAVIAVLYTLVGGLYSVAYTDVVQLFCIFLGLWISIPFALLNPAVTDIIVTANQEVYQEPWVGNIQSKDSLIWIDNFLLLMLGGIPWQVYFQRVLSASSATYAQVLSFLAAFGCVLMAIPSVLIGAIGTSTDWNQTSYGLPGPIGKNETDMILPIVLQHLCPPYISFFGLGAVSAAVMSSADSSILSASSMFARNIYHLAFRQEASDKEIVWVMRITIFLFGGAATSMALLAQSIYGLWYLSSDLVYVIIFPQLISVLFVKGTNTYGSIAGYIIGFLLRISGGEPYLHMQPFIYYPGCYLDHSFGDDPVYVQRFPFKTMAMLFSFLGNTGVSYLVKYLFVSGILPPKLDFLDSVVSKHSKEIMDKTFLMNQDNITLSELVHVNPIHSASVSAALTNKEAFEDIEPNPELSKSGND
Protein: At4g38290 (Integral membrane hemolysin-III-like protein) (Q8L6Z3)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Interaction partners:
- Protein tesmin/TSO1-like CXC 5
- Pyridoxamine 5'-phosphate oxidase family protein
- Pyridoxamine 5'-phosphate oxidase family protein
- At2g40630/T2P4.2
- THO complex subunit 4B
- THO complex subunit 4A
Sequence:
MEIPEGTSKDSEKANEQDSVSSIGAKKPPLESPATTNAASGRLVYVRRRVEVDTSKAAASTTNPNPPPTKAPLQIPSSPAQEPTPTSHKLDWEERYLHLQMLLNKLNQSDRTDHVQMLWSLSSAELSKHAVDLEKRSIQFSLEEAREMQRVAALNMLGRSVNSLKSTSNE
Protein: 2-methyl-6-phytyl-1,4-hydroquinone methyltransferase, chloroplastic (EC 2.1.1.295) (37 kDa inner envelope membrane protein) (E37) (MPBQ/MSBQ methyltransferase) (Protein ALBINO OR PALE GREEN MUTANT 1) (Protein INNER ENVELOPE PROTEIN 37) (Protein VITAMIN E DEFECTIVE 3) (Q9LY74)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Involved in a key methylation step in both tocopherols (vitamin E) and plastoquinone synthesis. Catalyzes the conversion of 2-methyl-6-phytyl-1,4-hydroquinone (MPBQ) to 2,3-dimethyl-6-phytyl-1,4-hydroquinone (DMPQ, a substrate for tocopherol cyclase), and 2-methyl-6-solanyl-1,4-benzoquinone (MSBQ) to plastoquinone.
Subcellular location: Plastid, chloroplast inner membrane {ECO:0000269|PubMed:20194502}; Single-pass membrane protein {ECO:0000269|PubMed:20194502}. Note=The transmembrane domain is sufficient to direct stop-transfer insertion and topology in the inner envelope membrane. {ECO:0000269|PubMed:20194502}.
Interaction partners:
- Tocopherol cyclase, chloroplastic
- Homogentisate solanesyltransferase, chloroplastic
- Homogentisate phytyltransferase 1, chloroplastic
- Tocopherol O-methyltransferase, chloroplastic
- Phytol kinase 1, chloroplastic
- Protein VTE6, chloroplastic
- Solanesyl diphosphate synthase 2, chloroplastic
- 4-hydroxyphenylpyruvate dioxygenase
- Ubiquinone biosynthesis O-methyltransferase, mitochondrial
- Ubiquinone biosynthesis monooxygenase COQ6, mitochondrial
Sequence:
MASLMLNGAITFPKGLGSPGSNLHARSIPRPTLLSVTRTSTPRLSVATRCSSSSVSSSRPSAQPRFIQHKKEAYWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLSHPDMRVVDVGGGTGFTTLGIVKTVKAKNVTILDQSPHQLAKAKQKEPLKECKIVEGDAEDLPFPTDYADRYVSAGSIEYWPDPQRGIREAYRVLKIGGKACLIGPVYPTFWLSRFFSDVWMLFPKEEEYIEWFKNAGFKDVQLKRIGPKWYRGVRRHGLIMGCSVTGVKPASGDSPLQLGPKEEDVEKPVNNPFSFLGRFLLGTLAAAWFVLIPIYMWIKDQIVPKDQPI
Protein: Serpin 4 (Serpin 42Da, isoform F) (Q8MM49)
Organism: Drosophila melanogaster (Fruit fly)
Interaction partners:
Sequence:
MDYRLVPCGCWLLPLLGLALFPFPPVHTADVTMADAAHQEFARRLALFSINVYGKLSGQKPGENIVFSPFSIQTCAAMARLGAENETATQLDQGLGLASSDPEQIAHSFHQVLAAYQDSQILRIANKIFVMDGYQLRQEFDQLLSKQFLSAAQSVDFSKNVQAAATINNWVEQRTNHLIKDLVPADVLNSESRLVLVNAIHFKGTWQHQFAKHLTRPDTFHLDGERTVQVPMMSLKERFRYADLPALDAMALELPYKDSDLSMLIVLPNTKTGLPALEEKLRLTTLSQITQSLYETKVALKLPRFKAEFQVELSEVFQKLGMSRMFSDQAEFGKMLQSPEPLKVSAIIHKAFIEVNEEGTEAAAATGMVMCYASMLTFEPQPVQFHVQHPFNYYIINKDSTILFAGRINKF
Protein: Rabankyrin-5 (Rank-5) (Ankyrin repeat and FYVE domain-containing protein 1) (Ankyrin repeats hooked to a zinc finger motif) (Q9P2R3)
Organism: Homo sapiens (Human)
Function: Proposed effector of Rab5. Binds to phosphatidylinositol 3-phosphate (PI(3)P). Involved in homotypic early endosome fusion and to a lesser extent in heterotypic fusion of chlathrin-coated vesicles with early endosomes. Involved in macropinocytosis; the function is dependent on Rab5-GTP. Required for correct endosomal localization. Involved in the internalization and trafficking of activated tyrosine kinase receptors such as PDGFRB. Regulates the subcellular localization of the retromer complex in a EHD1-dependent manner. Involved in endosome-to-Golgi transport and biosynthetic transport to late endosomes and lysosomes indicative for a regulation of retromer complex-mediated retrograde transport.
Subcellular location: Cytoplasm {ECO:0000269|PubMed:10940552}. Endosome membrane {ECO:0000269|PubMed:10940552}; Peripheral membrane protein {ECO:0000269|PubMed:10940552}. Early endosome {ECO:0000269|PubMed:15328530}. Note=Also associated with endosomal membranes. Localizes to macropinosomes. {ECO:0000269|PubMed:15328530}.
Interaction partners:
- Ras-related protein Rab-5A
- EH domain-containing protein 1
- Rabenosyn-5
- Kinesin-like protein KIF1C
- Rho-related GTP-binding protein RhoD
- Phosphatidylinositol-3,5-bisphosphate 3-phosphatase MTMR4
- GTPase-activating protein and VPS9 domain-containing protein 1
- Cullin-3
- Rab GTPase-binding effector protein 1
Sequence:
MAEEEVAKLEKHLMLLRQEYVKLQKKLAETEKRCALLAAQANKESSSESFISRLLAIVADLYEQEQYSDLKIKVGDRHISAHKFVLAARSDSWSLANLSSTKELDLSDANPEVTMTMLRWIYTDELEFREDDVFLTELMKLANRFQLQLLRERCEKGVMSLVNVRNCIRFYQTAEELNASTLMNYCAEIIASHWDDLRKEDFSSMSAQLLYKMIKSKTEYPLHKAIKVEREDVVFLYLIEMDSQLPGKLNEADHNGDLALDLALSRRLESIATTLVSHKADVDMVDKSGWSLLHKGIQRGDLFAATFLIKNGAFVNAATLGAQETPLHLVALYSSKKHSADVMSEMAQIAEALLQAGANPNMQDSKGRTPLHVSIMAGNEYVFSQLLQCKQLDLELKDHEGSTALWLAVQHITVSSDQSVNPFEDVPVVNGTSFDENSFAARLIQRGSHTDAPDTATGNCLLQRAAGAGNEAAALFLATNGAHVNHRNKWGETPLHTACRHGLANLTAELLQQGANPNLQTEEALPLPKEAASLTSLADSVHLQTPLHMAIAYNHPDVVSVILEQKANALHATNNLQIIPDFSLKDSRDQTVLGLALWTGMHTIAAQLLGSGAAINDTMSDGQTLLHMAIQRQDSKSALFLLEHQADINVRTQDGETALQLAIRNQLPLVVDAICTRGADMSVPDEKGNPPLWLALANNLEDIASTLVRHGCDATCWGPGPGGCLQTLLHRAIDENNEPTACFLIRSGCDVNSPRQPGANGEGEEEARDGQTPLHLAASWGLEETVQCLLEFGANVNAQDAEGRTPIHVAISSQHGVIIQLLVSHPDIHLNVRDRQGLTPFACAMTFKNNKSAEAILKRESGAAEQVDNKGRNFLHVAVQNSDIESVLFLISVHANVNSRVQDASKLTPLHLAVQAGSEIIVRNLLLAGAKVNELTKHRQTALHLAAQQDLPTICSVLLENGVDFAAVDENGNNALHLAVMHGRLNNIRVLLTECTVDAEAFNLRGQSPLHILGQYGKENAAAIFDLFLECMPGYPLDKPDADGSTVLLLAYMKGNANLCRAIVRSGARLGVNNNQGVNIFNYQVATKQLLFRLLDMLSKEPPWCDGSYCYECTARFGVTTRKHHCRHCGRLLCHKCSTKEIPIIKFDLNKPVRVCNICFDVLTLGGVS
Protein: Sphingolipid delta(4)-desaturase/C4-monooxygenase DES2 (EC 1.14.18.5) (EC 1.14.19.17) (Degenerative spermatocyte homolog 2) (Sphingolipid 4-desaturase) (Sphingolipid C4-monooxygenase) (Q8R2F2)
Organism: Mus musculus (Mouse)
Function: Bifunctional enzyme which acts as both a sphingolipid delta(4)-desaturase and a sphingolipid C4-monooxygenase.
Subcellular location: Endoplasmic reticulum membrane {ECO:0000269|PubMed:16571104, ECO:0000305}; Multi-pass membrane protein {ECO:0000269|PubMed:16571104, ECO:0000305}.
Interaction partners:
- Ceramide synthase 4
- 3-ketodihydrosphingosine reductase
- Ceramide glucosyltransferase
- Ceramide synthase 5
- Ceramide synthase 2
- Sphingomyelin phosphodiesterase 4
- Alkaline ceramidase 1
- Ceramide synthase 3
- Phosphatidylcholine:ceramide cholinephosphotransferase 2
- Alkaline ceramidase 2
Sequence:
MGNSAARSDFEWVYSDQPHTQRRKEMLAKYPAIKALMRPDPHIKWTVSGMVLVQVLACWLVRGLSWRWLLFWAYAFGGCINHSLTLAIHDISHNTAFGTSCVSRNRWFAIFANLPIGLPYATSFKKYHVDHHRYLGGDGLDVDIPTNFEGWFFCTPARKLLWLVLQPFFYSLRPLCVNPKVVTRMEILNALVQLAFDVTIFALWGIKPIVYLLGSSLLGLGLHPISGHFVAEHYMFLKGHETYSYYGPLNWITFNVGYHMEHHDFPSIPGYYLPLVRKIAPEYYDHLPQHHSWVKVLWDFVFEDSMGPYSRVKRKCKLAKDHL
Protein: 4-galactosyl-N-acetylglucosaminide 3-alpha-L-fucosyltransferase 9 (EC 2.4.1.152) (Fucosyltransferase 9) (Fucosyltransferase IX) (Fuc-TIX) (FucT-IX) (Galactoside 3-L-fucosyltransferase) (Q9Y231)
Organism: Homo sapiens (Human)
Function: Catalyzes the transfer of L-fucose, from a guanosine diphosphate-beta-L-fucose, to the N-acetyl glucosamine (GlcNAc) of a distal lactosamine unit of a glycoprotein or a glycolipid-linked polylactosamine chains through an alpha-1,3 glycosidic linkage and participates in particular to the Lewis x (Lex)/CD15 epitope biosynthesis in neurons which allows cell differentiation, cell adhesion, and initiation of neurite outgrowth. Also fucosylates di-, tri- and tetraantennary N-glycans linked to glycoproteins and the inner lactosamine unit of the alpha2,3-sialylated polylactosamine resulting in sLex (CD15s) epitope synthesis. Furthermore, it is capable of synthesizing Lewis a (Lea), although to a lesser extent than Lex and Lewis y (Ley) and to confer SELE-dependent, but not SELL- and SELP-selectin-dependent, cell rolling and adhesion by enhancing Lex and sLex synthesis. May also fucosylate the internal LacNAc unit of the polylactosamine chain to form VIM-2 antigen that serves as recognition epitope for SELE.
Subcellular location: Golgi apparatus, trans-Golgi network membrane {ECO:0000269|PubMed:18395013}; Single-pass type II membrane protein {ECO:0000250|UniProtKB:Q6P4F1}. Golgi apparatus membrane {ECO:0000250|UniProtKB:O88819}.
Interaction partners:
- Galactoside alpha-
- Galactoside alpha-
- Type 2 lactosamine alpha-2,3-sialyltransferase
- Beta-1,4-galactosyltransferase 1
- Beta-1,4-galactosyltransferase 2
- N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 2
- Beta-1,4-galactosyltransferase 4
- N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 3
- Beta-1,4-galactosyltransferase 3
- N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 4
Sequence:
MTSTSKGILRPFLIVCIILGCFMACLLIYIKPTNSWIFSPMESASSVLKMKNFFSTKTDYFNETTILVWVWPFGQTFDLTSCQAMFNIQGCHLTTDRSLYNKSHAVLIHHRDISWDLTNLPQQARPPFQKWIWMNLESPTHTPQKSGIEHLFNLTLTYRRDSDIQVPYGFLTVSTNPFVFEVPSKEKLVCWVVSNWNPEHARVKYYNELSKSIEIHTYGQAFGEYVNDKNLIPTISTCKFYLSFENSIHKDYITEKLYNAFLAGSVPVVLGPSRENYENYIPADSFIHVEDYNSPSELAKYLKEVDKNNKLYLSYFNWRKDFTVNLPRFWESHACLACDHVKRHQEYKSVGNLEKWFWN
Protein: Testis-expressed protein 44 (Q53QW1)
Organism: Homo sapiens (Human)
Subcellular location: Cytoplasm {ECO:0000269|PubMed:26168773}.
Interaction partners:
Sequence:
MALPGYPLGNVDDSRSKDSPAGEPQGQVPLTADVLAVSSSVASTDWQDIDQASFKTATPRAISTSGDKDKSAVVPEHGQKTPRKITPLLPSQNPSPLQVSMSLQNPAWDRQVQDARTSQSLVVFPSHLLGKDKMSQMASVPEREPESAPSAPSAELQSTQHMEAQPVESDADHVTAGANGQHGPQAASTTKSAEEKAEHPKAPHPEAEALPSDESPVAMGANVVDSLGDLQTWFFPPPPAGSVSPSPGPHEVALGRRPLDSSLYTASEENSYMRSMTSLLDRGEGSISSLADILVWSETTMGMAIATGFLDSGHSTVADLLHSSGPSLRSVPSLVGSVSSAFSSGLVSGTSSALRTITRVLETVEQRTVEGIRSAMRYLTSHLTPRQAQADPNYD
Protein: mitogen-activated protein kinase kinase (EC 2.7.12.2) (B1NA67)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Interaction partners:
Sequence:
MLLLVLSNLSNMESEGIVIRIKTPVGDMDSPVDSPSHLNFNDLLAAIRDAMPEATVTAFEYEDEVGDRITVRSDDELKAMLSYYCNTVMEQRFNGLLPEPLQIFPRAGKTPGIRNIHGLKVNTRPESSSGRSSSAADSRSSDSLKKSSAELKKILTNGQINEHDLQYQEQLGHGNGGTVYKAYHLLGKRIVAVKVIPLDITVELQKQIMSELEILYKCDSPYIIKFYSAFFVENRISICTEFMDGGSLDVYWRIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSIAKTYVGTNAYMAPERISGEQYGIHSDVWSVGISFMELALGSFPYPQIQKNQGSLMPLQLLQCIVDEDPPVLPVGQFSEKFVHFITQCMRKLPKERPAPNNLMDHPFIVQYNDGNTEVVSMWVCRSLEDRKAQQPQRLM
Protein: Class 3 lipase, putative (Q387R7)
Organism: Trypanosoma brucei brucei (strain 927/4 GUTat10.1)
Interaction partners:
Sequence:
MCTCTCCNKAIQYCCCRTCSRCSKPLNRLPRGRHCKRCWRSVCSACTTRCRYVNMLGPPEVVCDGCAVPHSIAFLNERKRGTPLWGLYVLWGATDAPAVCVTPSCGTYAYTTLCRACGLPTVSSRAHVTRSVHDTRKPSPQVTDELRFLDVREYHDREAVVNGYSSADVEETFRSCFPRGEDVAAFPHIGSACEVRNLLMSLVAAGLAYEYNRAPSLTLSLSDFPFACLLKLVRYNRRYTVLEAPGKVKFISFPGTHNPETVAVSLRLSHVKRQRWFFHKEGEAGASACASSTDVIGDCNSRPGLHQQVGGLPLHYRVHAGFIREAENLVPQMEEFVGEAIHHGYRLVFSGHSLGGAVATLVALQLLQTHPDLARDRVRCFTFGAPLVGDRQLTELVQRFGLTPNFHHIVHQLDIVPRLLCTYEWLRGCVDELAGRATLLFSSVKSWVGRFSSGEVDEGGHSEEADTIESRIRNGEGAVNAESPVEVEDGDEPHSSASGPRYACFGNYHFLSDDGTKFFSTDNPEAAYQTLRGSGNEKAAVRSHRVFAYNRAIFLRVYTNGRST
Protein: DNA replication-related element factor, isoform A (DNA replication-related element factor, isoform B) (DREF) (FI03642p) (Q94883)
Organism: Drosophila melanogaster (Fruit fly)
Interaction partners:
- Boundary element associated factor
- TATA box-binding protein-like 1
- Myeloid leukemia factor
- Centrosome-associated zinc finger protein Cp190
- Chromodomain-helicase-DNA-binding protein Mi-2 homolog
- LD15904p
- Chromatin-remodeling complex ATPase chain Iswi
- Inorganic pyrophosphatase
- Transcriptional regulator ATRX homolog
- Transcription factor E2f1
Sequence:
MSEGVPASPVAIGELKYEDVSQLNFSKLYSPKMKSVYWRYFGFPSNDNNEVITKQNVVCIKCHKVLTNHGNTTNLRAHLQHRHKDLFKELCQEHDIHVPPRKTPRNVSHPPLSKRNVSSRRVKLEFINNRNHDNASDDELDEAAVATAAMQAEEDASSQTMLYETMVPFTYDEAENLVEEEERLVMEPKYGRKRKVATPSSALMHGRVIKHEEGGYAAVANIANLAEALTDIVIKDLRNVDSLYDAGFGEFLRQVLGNSAAMPEPHKIDSLINEMHASKFLEIGEITRDFTSEKPFSLAFEMWVNVEQRRFLSIFHHFLDEETHSVRGMLYATVEYNDYIVFDDLLTDFYLANCTLAIINYDEEEDLLHTYLREKNIPISLCYVSVIDKCLRRVFEIEEVATLLEQVKDLMQRHSTEIASKVSEVPMPTYNEHFPWTLYETLKFFAESISWSEDMDHLVISAKTVTEALSALVIALDTLRGEDIPLCSMLSPITSKILIKKLGIAEQDDPLMMNLKRTISSVLQAHVISNDNLTAAALLDPRFHRLTTIDNLERTVRMLTHKYNINFGGVGEGESNEVAATSSVVAIKSEPRVVDGSAPKKLGLKLLFDSNEIPNPPKRDADSSVESDLKRYRNEVVVQLDESPIEWWLKMGHIYGTLRDLASLYHSVPGVVTLSFKKALRDQIYDFNKRFMLTGSHIDAILFLHHHNN
Protein: Pentatricopeptide repeat-containing protein At1g26460, mitochondrial (Q9FZD1)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Subcellular location: Mitochondrion {ECO:0000269|PubMed:14671022}.
Interaction partners:
- Small ribosomal subunit protein uS11m
- Small ribosomal subunit protein mS29
- Pentatricopeptide repeat-containing protein At5g08510
- ARM repeat superfamily protein
- Pentatricopeptide repeat-containing protein At4g35850
- Small ribosomal subunit protein mS78
- Pentatricopeptide repeat-containing protein At5g16640
- Pentatricopeptide repeat-containing protein At1g19720
- Prohibitin-7, mitochondrial
- Small ribosomal subunit protein mS86
Sequence:
MASHLFTRSRISLLKTLKPNPFTSASPIRAISGTPFLSQDPLLATESTDHDPSNHQSTSTPLPPNPATGSPLYQENWRSPIPNTPSFNQSLVPLGFLNQAPAPRIRALSETLDMNSLLNMFADWTASQRWSDMKQLFEVWVRSLDKNGKPNKPDVNLYNHYLRANLMMGASAGDMLDLVAPMEEFSVEPNTASYNLVLKAMYQARETEAAMKLLERMLLLGKDSLPDDESYDLVIGMHFGVGKNDEAMKVMDTALKSGYMLSTSVFTECVRSCVAKGRTDTLVSIIERCKAVDRNKSLCPSWILCNYIAEVAIQEDNSKLAFYAFEFMFKWITRGEMARPSVIFSVDEGLVVAGLASAARTCSSSLVEGSWTILKQSLRGRKAANPASYIAKINAYASLGNLQKAFTSLHELESAYADSEKEVVEEMLSPFTSLYPLVVACSKKGFETLDEVYFQLESLSQGDTPYKSVAALNCIILGCANTWDLDRAYQTFEAISASFGLTPNIDSYNALLYAFGKVKKTFEATNVFEHLVSIGVKPDSRTYSLLVDAHLINRDPKSALTVVDDMIKAGFEPSRETLKKLRRRCVREMDDENDDQVEALAKKFQIRMGSENRRNMLFNIDYSRGRALNN
Protein: SKP1-like protein ASK10 (Q9C5T5)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Subcellular location: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
Interaction partners:
Sequence:
TRPGQRKVRLTSSDGETFEVERDVIALSTTLNTMMMDLGLDNADAEMDAVPLQNVAGPILRKVLLWCTSHKDDPPSADDDNREKRTDDIPSWDVEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRRTFNIKNDFTPEEEEQIRRENAWCED
Protein: Uncharacterized protein Rv2297 (P9WLD9)
Organism: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Interaction partners:
- Haloalkane dehalogenase 1
Sequence:
MAMEMAMMGLLGTVVGASAMGIGGIAKSIAEAYVPGVAAAKDRRQQMNVDLQARRYEAVRVWRSGLCSASNAYRQWEAGSRDTHAPNVVGDEWFEGLRPHLPTTGEAAKFRTAYEVRCDNPTLMVLSLEIGRIEKEWMVEASGRTPKHRG
Protein: Repulsive guidance molecule A (Q8JG54)
Organism: Gallus gallus (Chicken)
Function: Acts as an axon-specific repulsive guidance molecule in the retinotectal system. Repulsive for a subset of axons of the temporal half of the retina. Provides thus positional information for the temporal axons invading the optic tectum in the stratum opticum.
Subcellular location: Cell membrane {ECO:0000269|PubMed:12353034}; Lipid-anchor, GPI-anchor {ECO:0000269|PubMed:12353034}.
Interaction partners:
- Neogenin
- Bone morphogenetic protein receptor type-1B
- receptor protein serine/threonine kinase
- Activin receptor type-1
- Repulsive guidance molecule BMP co-receptor b.
- Netrin receptor UNC5
- Netrin-1
- Netrin-3
- Leucine rich repeats and immunoglobulin like domains 2.
Sequence:
MGRGAGSTALGLFQILPVFLCIFPPVTSPCKILKCNSEFWAATSGSHHLGAEETPEFCTALRAYAHCTRRTARTCRGDLAYHSAVHGIDDLMVQHNCSKDGPTSQPRLRTLPPGDSQERSDSPEICHYEKSFHKHSAAPNYTHCGLFGDPHLRTFTDTFQTCKVQGAWPLIDNNYLNVQVTNTPVLPGSSATATSKLTIIFKSFQECVEQKVYQAEMDELPAAFADGSKNGGDKHGANSLKITEKVSGQHIEIQAKYIGTTIVVRQVGRYLTFAVRMPEEVVNAVEDRDSQGLYLCLRGCPLNQQIDFQTFRLAQAAEGRARRKGPSLPAPPEAFTYESATAKCREKLPVEDLYFQSCVFDLLTTGDVNFMLAAYYAFEDVKMLHSNKDKLHLYERTRALAPGNAAPSEHPWALPALWVALLSLSQCWLGLL
Protein: FHA domain-containing protein PS1 (Protein PARALLEL SPINDLE 1) (AtPS1) (B7SY83)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Required for normal spindle orientation at male meiosis II and normal formation of tetrad of microspores. Not involved in female meiosis.
Interaction partners:
- Nucleolar-like protein
- Kinesin-like protein KIN-14Q
- Protein POLLENLESS 3-LIKE 2
- Sister chromatid cohesion protein PDS5 homolog E
- Dymeclin
- Protein ALTERED SEED GERMINATION 2
- Probable pectate lyase 8
- Protein JASON
- DNA topoisomerase 1 beta
- Protein SCAR2
Sequence:
MEVKEEKLMEEKQRLPEKTIPVFTVLKNGAILKNIFVVNSRDFSSPERNGSTVSDDDGEVEEILVVGRHPDCDILLTHPSISRFHLEIRSISSRQKLFVTDLSSVHGTWVRDLRIEPHGCVEVEEGDTIRIGGSTRIYRLHWIPLSRAYDLDNPFVSPLDASTVLEQEEENRMLEAENLEVAQHQSLENTTSGDEGVLHLDVTSEGTGSSVPSEDEDTYVTTREMSMPVASPSVLTLVRDSVETQKLQFNEDLQTSPKWDLDVIESVAEKLSGSFVRSTQQSGGDVEGLGCSELFDAAEADECDVRGDGGLHLNVISEKMESSVPNMIEAENLEVAQHQSLANTALGDDEDLHLDVTSEGTGSSVPSEDEDTYITTMEISVPLASPNVLTLARDSIKTQKLQSTQDFQTPTMWDLDVVEAAAEKPSSSCVLGKKLSGGYVEELGCFELFVAAEADKCDVRGDGSLHLNEISERMESSMSNKEDDPFLAAKETSSLPLSTDFINPETLWLVEDVQASPEFCTSSVKANAENPSSGCSPSTEQIDGCFETSGCSAFDLAAEVESLSLHQEVSEETEFVTKEVMGVSSEPLGKADIRSHEENGESEDSRQVIEVSAEPVAKADIQSHEENGETEGSRQVIEVSPKSFSEAEPTIEILTGEAQGIIGSEFPSELAVETESENLLHQKSIGETKNEIRSHEDYGETEDYGETECSWPDIAVSPSSVSPPEPTLEILTDEARGLLGSEFLSEVTVETEIENLLHQKSNVETKADILIHEDYGETEVSRQIITVSPNSFSKAEPTLETEDSRQQARGLVGSDSEFQSEVAMKTECENLLNQKRNGETKVSSRQASPVSDCLSTPKDRLSSINTDDIQSLCSSSQPPSESEVNPATDQDQESGIISETEKPKTELLIGSGRSEKYYSLSEIEGEENTDIGRLSRCPIPSALAAKTSEDTKLIEELSSSDSGSQENQTPETHAVRDDVLCDMDSSSTCNIWSRRGKAASVLKIRTNKSQGKQKQTGRQPKDKLHRKQALSDKSISLTIHHGAEILEPEIFTPDKENLTPSSHMLKRLQDIGDVKDSKSSLKLSGKSCSSLVHSSIAVLASEAFTEPEIFTPDKENLTPSSHMLKRLREFGDIKDTKGSSSKATRKPFFDIRMEENVMVEQEPEDLHSLGSKSKLKHEPLAPKKKAERAPFQPLLEKSSFQSQSYTEASSTASARNNISRGIRSSSNLSDAKSKMKWTIVLDTSSLLDKESRKPLQLLQGLKGTHLVVPRTVLRELNEVKRSRSFLFRRRTEIASSALDWIEECKVNSKWWIQVQSPTEETKAIAPTPPVTPQSNGSSAFPFSLHWNNYAPEIDSPTSEDQVLECALLYRNRNRDEKLVLLSNDVTLKIKAMAEGVICETPHEFYESLVNPFSERFMWTESTARGRTWSHLDNDVLRERYNDRACRRKSTYNRGESGAAAKGLKLILLHNSHYGHTH
Protein: Lipoprotein YfjS (O52982)
Organism: Escherichia coli (strain K12)
Function: Does not induce degP when overexpressed unless it is mutated to resemble YafY.
Subcellular location: Cell inner membrane {ECO:0000305|PubMed:15252048}; Lipid-anchor {ECO:0000305|PubMed:15252048}.
Interaction partners:
- Uncharacterized protein YpjK
- Uncharacterized protein YfjT
- Uncharacterized HTH-type transcriptional regulator YfjR
Sequence:
MKRKTLPLLALVATSLFLSACDDRSDDLKAISKFKDLTPPRFSDVVSRQDDVSEEWSQVGFSSGLTLQVLRTRESPDGCEGGSYYYLVDMEEKTVQPLMNALCIADNIKLEYHEVTDPYTKEKYFEYSHDGKLMGRLLIPSNPDNRE
Protein: Erythrocyte membrane protein band 4.1-like 3 (A0A8I5ZSB9)
Organism: Rattus norvegicus (Rat)
Subcellular location: Cytoplasm, cytoskeleton {ECO:0000256|ARBA:ARBA00004245}.
Interaction partners:
Sequence:
MTTESGSDSESKPDQEAEPQEAAGPQEQAGAQAAPEPAGGNVEEQPGLEQFPEAAAHSTPVKREVSDKDRDFAAAAAKQLEYQQFEDDKLSQKSSSSKLSRSPLKIVKRPKSMQCKVTLLDGSEYGCDVDKRSRGQVLFDKVCEHLNLLEKDYFGLTYRDAENQKNWLDPAKEIKKQIRSGAWHFSFNVKFYPPDPAQLSEDITRYYLCLQLRDDIVSGRLPCSFVTLALLGSYTVQSELGDYDPDECGNDYISEFRFAPNHTKELEDKVIELHKSHRGMTPAEAEMHFLENAKKLSMYGVDLHHAKDSEGVEIMLGVCASGLLIYRDRLRINRFAWPKVLKISYKRNNFYIKIRPGEFEQFESTIGFKLPNHRAAKRLWKVCVEHHTFFRLLLPEAPPKKFLTLGSKFRYSGRTQAQTRRASALIDRPAPYFERSSSKRYTMSRSLDGASVNENHEIYMKDSMSAAEVGTGQYATTKVISQTNLITTVTPEKKAEEEHVEEEDRRKKAEEATPVAALRHEGKSPGHGSDSCPLSPPSAHLDPPSPTELRRRCKEKERASPGSAVPRAELSSESDAQGKAYLGDQDVAFSYRQPAGKGTTLFSFSLQLPESFPSLLDEDGYLSFPNLSETNLLPQSWQHFLPIRSPSLLPCFLFIFFFLLSASFSVPYALTLSFPLALCLCFLEPKAASLSASLDNDPSDSSEEEVSRKSLWKSDHKTQDELVKHQTNISELKRTFLETSTETALTNEWEKRLSTSPVRLAARQEDAPMIEPLVPEETKQSSGEKLMDGSEILSLLESARKPTEFIGGVSSTTQSWVQKLETKTETIETEVEPTPHPQPLSTEKVLQETVLVEERHVMNVHASGDASHTARDDVDATESAPADRHSGNGKEGSSVTEAAKEQRGEEADKSAPEQEQPATVSQEEDQVSAIHSSEGLEQKSHFESSTVKVESISVGSVSPGGVKLETSTKEVPVVHTETKTITYESSQVDPGADLEPGVLMSAQTITSETTSTTTTTHITKTVKGGISETRIEKRIVITGDADIDHDQALAQAIKEAKEQHPDMSVTKVVVHKETEITPEDGED
Protein: Cilia- and flagella-associated protein 107 (Q2TA11)
Organism: Bos taurus (Bovine)
Function: Microtubule inner protein (MIP) part of the dynein-decorated doublet microtubules (DMTs) in cilia axoneme, which is required for motile cilia beating.
Subcellular location: Cytoplasm, cytoskeleton, cilium axoneme {ECO:0000269|PubMed:34715025}. Cytoplasm, cytoskeleton, flagellum axoneme {ECO:0000269|PubMed:37327785}.
Interaction partners:
- EF-hand domain-containing family member B
- Tektin-3
- Tektin-4
- Tektin-1
- RIB43A-like with coiled-coils protein 2
- EF-hand domain-containing family member C2
- Cilia- and flagella-associated protein 276
- EF-hand domain-containing protein 1
- Parkin coregulated gene protein
- Protein Flattop
Sequence:
MQFLTAVSPQSSSTPSWKIETKYSTRVLTGNWTEERRKFIKATEKTPQTIYRKEYVPFPGHRPDQISRWYSKRTVEGLPYKYLITHHQEPSQRYLISTYDDHYNRHNYHPGLPELRTWNRHKLLWLPEKADFPLLGPPTNYGLYEQLKQKWLPPPEATLRESIYTSSYPRPPAGAMSRREHAIPVPPPRLQPVPHF