wanglab/gogpt-training-data huggingface dataset:
Protein: Histidine--tRNA ligase, mitochondrial (EC 6.1.1.21) (Histidine--tRNA ligase-like) (Histidyl-tRNA synthetase) (HisRS) (Q99KK9)
Organism: Mus musculus (Mouse)
Function: Mitochondrial aminoacyl-tRNA synthetase that catalyzes the ATP-dependent ligation of histidine to the 3'-end of its cognate tRNA, via the formation of an aminoacyl-adenylate intermediate (His-AMP).
Subcellular location: Mitochondrion {ECO:0000250|UniProtKB:P49590}.
Interaction partners:
- Histidine--tRNA ligase, cytoplasmic
- Tyrosine--tRNA ligase, cytoplasmic
- Asparaginyl-tRNA synthetase
- Heme oxygenase 2
- Lysine--tRNA ligase
- Bifunctional glutamate/proline--tRNA ligase
- Aspartate--tRNA ligase, mitochondrial
- Methionine--tRNA ligase, cytoplasmic
- Alanine--tRNA ligase, cytoplasmic
- Tryptophan--tRNA ligase, mitochondrial
Sequence:
MPHLGPLRRRAWAALLGQLLRPPSTVCTRGCHSQVAKAVLTSEQLKSHQEKPNFVIKVPKGTRDLSPQQMVVREKILDKIISCFKRHGAKGLDTPAFELKEMLTEKYEDNFGLMYDLKDQGGELLSLRYDLTVPFARYLAMNKLKKMKRYQVGKVWRRESPAIAQGRYREFCQCDFDIAGEFDPMIPDAECLRIMCEILSGLQLGDFLIKVNDRRVVDGIFAVCGVPESKLRTICSSMDKLDKMSWEGVRHEMVAKKGLAPEVADRIGDFVQYHGGISLVEDLFKDPRLSQSQLALQGLGDLKLLFEYLRLFGIADKISLDLSLARGLDYYTGVIYEAVLLESPAQAGKETLSVGSVAAGGRYDNLVAQFDPKGHHVPCVGLSIGVERIFYLVEQKMKMSGEKVRTTETQVFVATPQKNFLQERLKIIAELWDAGIKAEMLYKNNPKLLTQLHYCEKADIPLMVIIGEQERNEGVIKLRSVASREEVTINRESLVAEIQKRLSES
Protein: Serine/threonine-protein phosphatase T (PPT) (EC 3.1.3.16) (AoPPT) (Q2U919)
Organism: Aspergillus oryzae (strain ATCC 42149 / RIB 40) (Yellow koji mold)
Subcellular location: Nucleus {ECO:0000250|UniProtKB:P53041}.
Interaction partners:
- CS domain-containing protein
- Flavin reductase like domain-containing protein
- Uncharacterized protein
- Hsp90 chaperone protein kinase-targeting subunit
Sequence:
MASSDLEAATALKVQGNKAFGQHEWPTAVDFYTQAIAKYDREPSFFSNRAQAHIKLEAYGFAIADATKALELDPAYTKAYWRRALANTAILNYKDALRDFKVVAKREPNNRDAKVKLADCEKLVRRMEFEKAIEVGDPPSAFEDLDIDAIAVDDSYDGVRLEKEMTQEFIDDMIERFKNGKKIHRKYAFQIVKAVKDIVYAEPTMVEIGVDQGTKLTVCGDTHGQFFDLLEIFRLNGYPSEKHAYLFNGDFVDRGSWSTEIALLLYAYKWLRPNGIFLNRGNHETDDMNKVYGFEGECKAKYNERMFKVFSESFSALPLATLIGNKYLVLHGGLFSDDNTSLDDIRKLDRHNQRQPGQQGLMMEMLWTDPQTEPGRGPSKRGVGLQFGPDVTKRFCEKNGLEAIIRSHEVRMEGYEVEHDGRCITVFSAPKYCDTTENKGAFINVGPELKLDFQVFEAVPHPDIKPMAYAQNSIMSMM
Protein: endopeptidase La (EC 3.4.21.53) (O53340)
Organism: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Interaction partners:
- Hydrolase
- UPF0182 protein Rv3193c
Sequence:
MNRRILTLMVALVPIVVFGVLLAVVTVPFVALGPGPTFDTLGEIDGKQVVQIVGTQTYPTSGHLNMTTVSQRDGLTLGEALALWLSGQEQLMPRDLVYPPGKSREEIENDNAADFKRSEAAAEYAALGYLKYPKAVTVASVMDPGPSVDKLQAGDAIDAVDGTPVGNLDQFTALLKNTKPGQEVTIDFRRKNEPPGIAQITLGKNKDRDQGVLGIEVVDAPWAPFAVDFHLANVGGPSAGLMFSLAVVDKLTSGHLVGSTFVAGTGTIAVDGKVGQIGGITHKMAAARAAGATVFLVPAKNCYEASSDSPPGLKLVKVETLSQAVDALHAMTSGSPTPSC
Protein: GEO04367p1 (LP02728p) (Q9W3H5)
Organism: Drosophila melanogaster (Fruit fly)
Interaction partners:
Sequence:
MDPTPPLRATNSINPQQVASVPPPPPTGQIIAPSGAFPGSLTPGWNDPPPISADSQSCKLNNSRPRLDLRKRVAHPLDGKSSSVQLVQPQLSIPTAQDSISPRPVALVTPQRQIPYPDPNNPPAGGADVGGFGAGPNANAVRLPPLAHSISIDPSRVAKVPPRTK
Protein: R3H domain-containing protein 1 (Q15032)
Organism: Homo sapiens (Human)
Interaction partners:
Sequence:
MRMSDTVTVKDETATMKDLEAEVKDTTRVENLIKSENYGKILVEKNEHCIENNIDLQRPLQSFGQTGKRSKSSSKLKLVRSLAVCEESPPPPAPEISQENQEKIQIQLTQSFEKEEKPSKDEAEKEKASDKLPRKMLSRDSSQEYTDSTGIDLHEFLVNTLKNNPRDRMMLLKLEQEILDFIGNNESPRKKFPPMTSYHRMLLHRVAAYFGLDHNVDQSGKSVIVNKTSNTRIPDQKFNEHIKDDKGEDFQKRYILKRDNSSFDKDDNQMRIRLKDDRRSKSIEEREEEYQRARDRIFSQDSLCSQENYIIDKRLQDEDASSTQQRRQIFRVNKDASGRSTNSHQSSTENELKYSEPRPWSSTDSDSSLRNLKPAVTKASSFSGISVLTRGDSSGSSKSIGRLSKTGSESSGSVGSSTGSLSHIQQPLPGTALSQSSHGAPVVYPTVSTHSSLSFDGGLNGQVASPSTSFFLLPLEAAGIPPGSILINPQTGQPFINPDGSPVVYNPPMTQQPVRSQVPGPPQPPLPAPPQQPAANHIFSQDNLGSQFSHMSLARQPSADGSDPHAAMFQSTVVLQSPQQSGYIMTAAPPPHPPPPPPPPPPPPPLPPGQPVPTAGYPASGHPVSQPVLQQQGYIQQPSPQMPACYCAPGHYHSSQPQYRPVPSVHYNSHLNQPLPQPAQQTGYQVIPNQQQNYQGIVGVQQPQSQSLVSGQPNSIGNQIQGVVIPYTSVPTYQVSLPQGSQGIPHQTYQQPVMFPNQSNQGSMPTTGMPVYYSVIPPGQQNNLSSSVGYLQHPGSEQVQFPRTTSPCSSQQLQGHQCTAGPPPPPGGGMVMMQLSVPNNPQSCAHSPPQWKQNKYYCDHQRGQKCVEFSSVDNIVQHSPQLSSPIISPAQSPAPAQLSTLKTVRPSGPPLSIMPQFSRPFVPGQGDSRYPLLGQPLQYNPPAVLHGHIPNQQGQPGSRHGNRGRRQAKKAASTDLGAGETVVGKVLEITELPDGITRMEAEKLFGELFKIGAKIRWLRDPQSQPRRHPLCCGSGDNTANPERSKPSDLASTYTVLATFPSISAAQNALKKQINSVNKFKLRTSKKHYDFHILERASSQ
Protein: Superoxide-generating NADPH oxidase light chain subunit (Cytochrome b-245 light chain) (p22-phox) (p22phox) (Q867X6)
Organism: Dictyostelium discoideum (Social amoeba)
Function: Critical component of the membrane-bound oxidase of phagocytes that generates superoxide.
Subcellular location: Cell membrane {ECO:0000250|UniProtKB:P13498}. Note=As unassembled monomer may localize to the endoplasmic reticulum. {ECO:0000250|UniProtKB:Q61462}.
Interaction partners:
- NADPH oxidase activator
- Superoxide-generating NADPH oxidase heavy chain subunit A
Sequence:
MGKFKLGNWAAMIGMAACWCLIAGGIMGIWYERRYIAIYSICVGGVLYPLLYPLSFLGPLKAIFHQYYVAAALMAGLSVLCYFLVPTMLAAMVMDISAVVFLISAIKGERGDFFDKQD
Protein: SIM bHLH transcription factor 2 (H7BZX8)
Organism: Homo sapiens (Human)
Subcellular location: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
Interaction partners:
Sequence:
XWGQPSRAGPLDGVAKELGSHLLQTLDGFVFVVASDGKIMYISETASVHLGLSQVELTGNSIYEYIHPSDHDEMTAVLTAHQPLHHHLLQEYEIERSFFLRMKCVLAKRNAGLTCSGYKVIHCSGYLKIRQYMLDMSLYDSCYQIVGLVAVGQSLPPSAITEIKLYSNMFMFRASLDLKLIFLDSRVTEVTGYEPQDLIEKTLYHHVHGCDVFHLRYAHHLLLVKGQVTTKYYRLLSKRGGWVWVQSYATVVHNSRSSRPHCIVSVNYVLTEIEYKELQLSLEQVSTAKSQDSWRTALSTSQETRKLVKPKNTKMKTKLRTNPYPPQQYSSFQMDKLECGQLGNWRASPPASAAAPPELQPHSESSDLLYTPSYSLPFSYHYGHFPLDSHVFSSKKPMLPAKFGQPQGSPCEVARFFLSTLPASGECQWHYANPLVPSSSSPAKNPPEPPANTARHSLVPSYEGKQMSSAEIPPAPQDAD
Protein: RILP-like protein 1 (GAPDH's competitor of SIAH1 protein enhances life) (GOSPEL) (Rab-interacting lysosomal-like protein 1) (D3ZUQ0)
Organism: Rattus norvegicus (Rat)
Function: Plays a role in the regulation of cell shape and polarity (By similarity). Plays a role in cellular protein transport, including protein transport away from primary cilia (By similarity). Neuroprotective protein, which acts by sequestring GAPDH in the cytosol and prevent the apoptotic function of GAPDH in the nucleus. Competes with SIAH1 for binding GAPDH. Does not regulate lysosomal morphology and distribution (By similarity). Binds to RAB10 following LRRK2-mediated RAB10 phosphorylation which leads to inhibition of ciliogenesis (By similarity).
Subcellular location: Cytoplasm, cytosol {ECO:0000269|PubMed:19607794}. Cytoplasm, cytoskeleton, microtubule organizing center, centrosome, centriole {ECO:0000269|PubMed:30398148}. Cytoplasm, cytoskeleton, cilium basal body {ECO:0000269|PubMed:30398148}.
Interaction partners:
- Ras-related protein Rab-10
- Ras-related protein Rab-8A
- Ras-related protein Rab-7L1
- EH domain binding protein 1-like 1
- Protein phosphatase 1H
- E3 ubiquitin-protein ligase SIAH1
Sequence:
MEEPLGSPPAALSALEKNVAELTVMDVYDIASLVGHEFERVIDQHGCEAIARLMPKVVRVLEILEVLVSRHHVAPELDELRLELDRLRVERMDRIEKERKHQKELELVEDVWRGEAQDLLSQIAQLQEENKQLMTNLNHKDVGFSEEELQKHEGMSERERQVMKRLKEVVDKQRDEIRAKDRELVLKNEDVEALQQQQTRLMKINHDLRHRVTVVEAQGKALIEQKVELEADLQTKEQEMGSLRAELGKLRERLQGEHSQNGEEEEAEIPPQPDGEESISDAEKAALDLKDPNRPRFTLQELRDVLHERNELKSKVFLLQEELAYYKSEEIEEENRIPQPPPITHPRTSPQPESGIKRLFSFFSRDKRRLANTQRPTHIHESFGQWAITHRDDGYTEQGQEALQHL
Protein: Ribosome biogenesis protein, putative (Q388D6)
Organism: Trypanosoma brucei brucei (strain 927/4 GUTat10.1)
Subcellular location: Nucleus, nucleolus {ECO:0000256|ARBA:ARBA00004604}.
Interaction partners:
- RNA-binding protein, putative
- rRNA processing protein, putative
- 60S ribosome subunit biogenesis protein NIP7 homolog
- Uncharacterized protein
- Ribosome biogenesis protein BOP1 homolog
- NLE domain-containing protein
- Nucleolar GTP-binding protein 1
- RNA processing factor 1, putative
- Nucleolar complex protein 2
- Pescadillo homolog
Sequence:
MVKREKRQRLADSSEEHGGTQETKQEVHGERGVVEESMIGEMQLKRATTDKRMTNRQKCLVLGSRNISSRDRHLLLDIRNLMPHAREHPKLGRTGGLGDSVIELCELHQCNSSLFIEAHRQDISYLWIAQAPRGPSVKMQLTNVHTADELRMAGNCLKYSRPLLHFDRDFETQPHLRVVKSLLQMTFNTPRYHPRSKPFVDHILCFFYLDGHIWFRHYQIIDTEPKSLMEIGPRFTLEPTSIFNGCFKGNVIWKNALARTPTEQRRDRKTRRLEKVHMNEAVKAKSKIHKALNPAPEPNPLDSVFRD
Protein: Protein LF2 (Q3KSP5)
Organism: Epstein-Barr virus (strain GD1) (HHV-4) (Human gammaherpesvirus 4)
Function: Prevents the establishment of cellular antiviral state by blocking the cellular IRF7-mediated innate immunity. May also inhibit viral replication by modulating BRLF1 activity (By similarity).
Interaction partners:
Sequence:
MAEAYPGGAHAALASRRSSFRNSLRRLRPTEKPDTSFMRGVWKYEIFPSYVRVTNKQVLQLDAQCQELPPCPSVGQILSFKLPSFSFNTTTYGSRYFTVAFLFFGAEDNEVFLKPFFVMHSAPGHRAKRPESAQPVHREREVYLVHCAHQIGQEPLPLPADSARAERHSADTLLHPERGQAKHQRAPDLPQWLSRHQPGRVPALPAGAAHAPISKVIRPYSHIPGEGMSGQRHTPR
Protein: A-kinase anchor protein 7 isoform alpha (AKAP-7 isoform alpha) (A-kinase anchor protein 18) (AKAP-18) (A-kinase anchor protein 9 kDa) (AKAP 9) (Protein kinase A-anchoring protein 7 isoform alpha) (PRKA7 isoform alpha) (O55074)
Organism: Mus musculus (Mouse)
Function: Targets the cAMP-dependent protein kinase (PKA) to the plasma membrane, and permits functional coupling to the L-type calcium channel. The membrane-associated form reduces epithelial sodium channel (ENaC) activity, whereas the free cytoplasmic form may negatively regulate ENaC channel feedback inhibition by intracellular sodium (By similarity).
Subcellular location: Lateral cell membrane {ECO:0000250}; Lipid-anchor {ECO:0000269|PubMed:9545239}.
Interaction partners:
Sequence:
MGQLCCFPFARDEGKICEKDRREPEDAELVRLSKRLVENAVLKAVQQYLEETQNKKQPGEGNSTKAEEGDRNGDGSDNNRK
Protein: Pituitary homeobox 2 (ALL1-responsive protein ARP1) (BRX1 homeoprotein) (Bicoid-related homeobox protein 1) (Homeobox protein PITX2) (Orthodenticle-like homeobox 2) (Paired-like homeodomain transcription factor 2) (Solurshin) (P97474)
Organism: Mus musculus (Mouse)
Function: Controls cell proliferation in a tissue-specific manner and is involved in morphogenesis. During embryonic development, exerts a role in the expansion of muscle progenitors. May play a role in the proper localization of asymmetric organs such as the heart and stomach. Isoform Ptx2c is involved in left-right asymmetry the developing embryo.
Subcellular location: Nucleus {ECO:0000305}. Cytoplasm {ECO:0000269|PubMed:20019746}.
Interaction partners:
- Catenin beta-1
- Forkhead box protein C1
- Left-right determination factor 1
- Lymphoid enhancer-binding factor 1
- Left-right determination factor 2
Sequence:
METNCRKLVSACVQLGVQPAAVECLFSKDSEIKKVEFTDSPKSRKESASSKLFPRQHPGANEKDKGQQGKNEDVGAEDPSKKKRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQAELCKNGFGPQFNGLMQPYDDMYPGYSYNNWAAKGLTSASLSTKSFPFFNSMNVNPLSSQSMFSPPNSISSMSMSSSMVPSAVTGVPGSSLNSLNNLNNLSSPSLNSAVPTPACPYAPPTPPYVYRDTCNSSLASLRLKAKQHSSFGYASVQNPASNLSACQYAVDRPV
Protein: Uncharacterized protein YJR112W-A (Q3E743)
Organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Subcellular location: Membrane {ECO:0000305}; Single-pass membrane protein {ECO:0000305}.
Interaction partners:
Sequence:
MVQLRRTITTNKVFQAITSTNDKVAHFVVFMWESWLFVKMFAEDIVTFRKLQANKYVLGVLICSLCASVTSEFAQSVVSRGQRVFDVKDIICNFWGSLLGVGIAFYQDR
Protein: 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) (A0A0A0MSE2)
Organism: Homo sapiens (Human)
Subcellular location: Mitochondrion matrix {ECO:0000256|ARBA:ARBA00004305}.
Interaction partners:
Sequence:
MAFVTRQFMRSVSSSSTASASAKKIIVKHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENLKAGDEFVEKTLSTIATSTDAASVVHSTDLVVEAIVENLKVKNELFKRLDKFAAEHTIFASNTSSLQITSIANATTRQDRFAGLHFFNPVPVMKLVEVIKTPMTSQKTFESLVDFSKALGKHPVSCKDTPGFIVNRLLVPYLMEAIRLYERVSDGDASKEDIDTAMKLGAGYPMGPFELLDYVGLDTTKFIVDGWHEMDAENPLHQPSPSLNKLVAENKFGKKTGEGFYKYK
Protein: Calvin cycle protein CP12-3, chloroplastic (CP12 domain-containing protein 3) (Chloroplast protein 12-3) (Q9C9K2)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Acts as a linker essential in the assembly of a core complex of PRK/GAPDH. Coordinates the reversible inactivation of chloroplast enzymes GAPDH and PRK during darkness in photosynthetic tissues.
Subcellular location: Plastid, chloroplast {ECO:0000269|PubMed:20399532}.
Interaction partners:
- CHP-rich zinc finger protein-like
- Myb/SANT-like DNA-binding domain protein
- Phosphoribulokinase, chloroplastic
- DNA-directed RNA polymerases II and V subunit 6B
- DNA-directed RNA polymerases II, IV and V subunit 6A
- FK506-binding-like protein
Sequence:
MISGSATASHGRVLLPSQRERRPVSTGSNILRFRETVPRQFSLMMVTKATAKYMGTKMREEKLSEMIEEKVKEATEVCEAEEMSEECRVAWDEVEEVSQARADLRIKLKLLNQDPLESFCQENPETDECRIYED
Protein: cAMP-dependent protein kinase type II-alpha regulatory subunit (A9C3T0)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Subcellular location: Cell membrane {ECO:0000256|ARBA:ARBA00004236}. Cytoplasm {ECO:0000256|ARBA:ARBA00004496}.
Interaction partners:
- cAMP-dependent protein kinase
- cAMP-dependent protein kinase catalytic subunit alpha
- cAMP-dependent protein kinase
- cAMP-dependent protein kinase
- Protein kinase, cAMP-dependent, regulatory, type I, alpha b.
- cAMP-dependent protein kinase type I-alpha regulatory subunit
- Protein kinase, cAMP-dependent, regulatory, type I, beta
- cAMP-dependent protein kinase type II regulatory subunit
- Si:ch211-272n13.7.
- Protein kinase X-linked
Sequence:
MSIEIPVGLTELLQGYTVEVLRQRPPDLVEFAVQYFTRLRDTRSQDGSGAAAKTGGKGVMFDGEPMQTESNGDEDDEDDDSDFEPPPPSRFNRRVSVCAEAFNPDDDEEDSEPRVVHPKTDEQRCRLQEACKDILLFKALDQEQFSEVLDAMFEVLVQPQDHVIDQGDDGDNFYVIERGVYDIVVQKDGVGCCVGQYNNKGSFGELALMYNTPRAATIIAKDEGALWGLDRATFRRLIVKNNAKKRRMYECFIESIPLLKSLELSERMKIVDVLGVKTFQDGERIIMQGDKADCFYIVESGEVKIMMKSKTKADRQDNAEVEIARCSRGQYFGELALVTNKPRAASAYAIGDVKCLVIDIQAFERLLGPCKEIMKRNIAHYEEQLVALFGSSVDLRD
Protein: N-acetylglucosamine-6-sulfatase (EC 3.1.6.14) (Glucosamine-6-sulfatase) (Q32KJ5)
Organism: Rattus norvegicus (Rat)
Subcellular location: Lysosome {ECO:0000256|PIRNR:PIRNR036666}.
Interaction partners:
- Beta-glucuronidase
- Beta-galactosidase
- Beta-hexosaminidase subunit alpha
- Alpha-N-acetylglucosaminidase
- AP complex subunit sigma
Sequence:
MRLPSAAGPGPGCPSRLPALLLLPLLSGCLGLVGAARRPNVLLLLTDDQDAELGGMTPLKKTKALIGEKGMTFSSAYVPSALCCPSRASILTGKYPHNHHVVNNTLEGNCSSKSWQKIQEPYTFPAILKLVCGYQTFFAGKYLNEYGAPDAGGLEHVPLGWSYWYALEKNSKYYNYTLSINGKARRHGENYSVDYLTDVLANLSLDFLDYKSNSEPFFMMISTPAPHSPWTAAPQYQKAFPNVIAPRNKNFNIHGTNKHWLIRQAKTPMTNSSIKFLDDAFRRRWQTLLSVDDLVEKLVKRLDSTGELDNTYIFYTSDNGYHTGQFSLPIDKRQLYEFDIKVPLLVRGPGIKPNQTSKMLVSNIDLGPTILDLAGYDLNKTQMDGTSLLPILKGDGNLTWRSDVLVEYQGEGRNVTDPTCPSLSPGVSQCFPDCVCEDAYNNTYACVRTLSSMWNLQYCEFDDQEVFVEVYNITADPDQITNIAKSIDPELLGKMNYRLMMLQSCSGPTCRTPGVFDPGYRFDLRLMFSNHGSIRMRRFSKHPL
Protein: H-2 class I histocompatibility antigen, alpha chain (Clone PAG64) (P01895)
Organism: Mus musculus (Mouse)
Function: Involved in the presentation of foreign antigens to the immune system.
Subcellular location: Membrane; Single-pass type I membrane protein.
Interaction partners:
Sequence:
RYEPRARWIEQEGPEYWERETRRAKGNEQSFRVDLRTALRYYNQSAGGSHTLQWMAGCDVESDGRLLRGYWQFAYDGCDYIALNEDLKTWTAADMAAQITRRKWEQAGAAERDRAYLEGECVEWLRRYLKNGNATLLRTDPPKAHVTHHRRPEGDVTLRCWALGFYPADITLTWQLNGEELTQEMELVETRPAGDGTFQKWASVVVPLGKEQKYTCHVEHEGLPEPLTLRWGKEEPPSSTKTNTVIIAVPVVLGAVVILGAVMAFVMKRRRNTGGKGGDYALAPVSQSSDMSLPDCKV
Protein: SCP1-like small phosphatase 4b (F4JQR6)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Interaction partners:
- Transcription initiation factor IIF subunit alpha
- RNA polymerase II C-terminal domain phosphatase-like 5
- Mitotic checkpoint protein BUB3.1
- RNA polymerase II C-terminal domain phosphatase-like 2
- Phosphatidate phosphatase PAH1
- Phosphatidate phosphatase PAH2
Sequence:
MPMPFLKMKSKISKDSLREKRVLGVCKKPHKDVKNSCFDPKISERMELLVTATQNCNNNEEQNIGLDSSTRDVVTNEPQDLLVEDSSKNASNMDTIFSPVLDDELYSETDRVFVEGNNVQWEMPRWGADDCSNNQFCNDSDYFLSDVLIASLPFYESGNVDFFTEISPLPHCIFPEPSVLLDAAEQYMLLPYLEDRSASSDDVKSDEDNRINRSRSKNLEAAENHTEAEQTEDFDPQIFLRNQPELADVVFNYFPDMQQPRDSPKRKAVTLVLDLDETLVHSTLEVCRDTDFSFRVTFNMQENTVYVKQRPYLYRFLERVVELFHVVIFTASHSIYASQLLDILDPDGKFVSQRFYRDSCILSDGIYTKDLTVLGLDLAKVAIVDNCPQVYRLQINNGIPIKSWYDDPTDDGLITLLPFLETLADANDVRPVIAKRFDHSTRSSFD
Protein: Chaperone DnaJ-domain superfamily protein (Q8RXJ5)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Interaction partners:
- E3 ubiquitin-protein ligase RMA
- Expressed protein
- Nudix hydrolase 23, chloroplastic
- At2g42060
- Tetratricopeptide repeat
- Shaggy-related protein kinase iota
- Protein ABIL2
Sequence:
MMAAIRAAILKPQDYYSHLKTALFHSTPILQRKHQSNSKARSKRFGRKKAKQDLRRNVNAFAQHLFGIWSDGFDYSGKHTSWFEKQYSRVSKRNRNGKTHIPQHLDKRCFDFSEVDEGYQIEYFLKTALGGSRGFSWSNTREGGTRSGRYSNNFRKSWGSRYRLDEEEEEEEEEYEYSSTGVSDTEPNQESHRQTLGLSSSGPLNLEDVKIAYRACALKWHPDRHHTSTKNEAEEKFKLCTVAYQSLCEKLAMN
Protein: 5'-nucleotidase, cytosolic IA (A0A8I5ZYY7)
Organism: Rattus norvegicus (Rat)
Interaction partners:
Sequence:
MTISRPRRNPNRPWLILVTEIVSCGLPVSGVWSVPTEAPEMVDSQPKPQNAVTIAVSSRALFRMDEEQRIYTEQGVEEYVRYQLEHENEPFSPGPAFPFVKALEAVNKQLRELYPDSEDIFDIVLMTNNHAQVGVRLINSINHYDLFIERFCMTGGNSPICYLKAYHTNLYLSADAEKVREAIDEGIAAATIFSPSKDVVVSQSQLRVAFDGDAVLFSDESERIVKAHGLDRFFEHEKAHENKPLAQGPLKGFLEALGRLQKKFYSKGLRLECPIRTYLVTARSAASSGARALKTLRSWGLETDEALFLAGAPKGPLLEKIRPHIFFDDQMFHVAGAQEMGTVAAHVPYGVAQNPRREKQSLGAQ
Protein: Glutathione S-transferase domain-containing protein (B0G141)
Organism: Dictyostelium discoideum (Social amoeba)
Interaction partners:
- Elongation factor 1b-related protein
- Elongation factor 1-alpha
- Elongation factor 1-beta
- Elongation factor 1-alpha
- Elongation factor 1b-related protein
- Elongation factor 2
- Large ribosomal subunit protein uL4
- Small ribosomal subunit protein eS7
- Elongation factor 2
- Large ribosomal subunit protein eL6
Sequence:
MVMKLYTYPQNSRAFKSLIAAKYVNVDIEVPAFNFETDRLTEEFKTNFPLGKVPALLTEQGPLFESNTMARYVARLNNSTIYGSDAYTAALNDQWIDYAANEIDPNAIPWLYAILGYYDYNAKDSNKAKENMKKVLAFLDAQLLNKPFLTGFRVALADIIVVCSLFNFYKMVFEPTFRSPYVNVNRWFTTCINQPNFKAVIGEFALCEKMMVYVAPKKEVKEEKPKAAPKKEVKEDAGDDEVDEKPKKKNPLDELAPSTFVLDEFKRTYSNNEVSMSIPWFFEHFDKEGFSVYQCTYQYNHELGPVFKTCNLVGGFFQRLETLHKYAFASMIIFGEEQGGAVKDQTVSGLWVFRGQDLPADMKDCDDSLVYDWKKLDVAADKAIIESFLAWEDKNGGFAGKKFLQGKLYK
Protein: Glucuronoxylan 4-O-methyltransferase 1 (EC 2.1.1.112) (Q6NMK1)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Methyltransferase catalyzing 4-O-methylation of glucuronic acid side chains on xylan.
Subcellular location: Golgi apparatus membrane {ECO:0000269|PubMed:23045523}; Single-pass membrane protein {ECO:0000269|PubMed:23045523}.
Interaction partners:
- UDP-glucuronate:xylan alpha-glucuronosyltransferase 1
- Probable galacturonosyltransferase 12
- Beta-1,4-xylosyltransferase IRX9
- UDP-glucuronate:xylan alpha-glucuronosyltransferase 2
- Protein trichome birefringence-like 33
- Protein trichome birefringence-like 3
- At5g19870)
- Probable glucuronoxylan glucuronosyltransferase IRX7
- RING-type E3 ubiquitin transferase
- Transmembrane E3 ubiquitin-protein ligase FLY2
Sequence:
MRPKANQNHKLKVLLVFLLATLILIFIVRSTLTSSQEHQTPQETRSTRCSGACNKLPRSLAQALIHYSTSVITPQQTLKEIAVSSRVLGKKSPCNFLVFGLGHDSLMWSSLNYGGRTVFLEEDEAWIKQIKRRFPMLESYHVTYDSKVNQADNLIEVGKGPECTAIGDPRYSMCQLALKGLPAEIYETGWDLIMVDAPTGYYDEAPGRMTAIYTAGMMARNRKQGGETDVFVHDVNREIEDKFSKAFLCEGYMKKQEGRLRHFIIPSYRDGSESESNRPFCP
Protein: Interferon alpha-10 (IFN-alpha-10) (Interferon alpha-6L) (Interferon alpha-C) (LeIF C) (P01566)
Organism: Homo sapiens (Human)
Function: Produced by macrophages, IFN-alpha have antiviral activities. Interferon stimulates the production of two enzymes: a protein kinase and an oligoadenylate synthetase.
Subcellular location: Secreted.
Interaction partners:
- Interferon alpha-16
- Interferon alpha-17
- Interferon alpha/beta receptor 1
- Interferon alpha-14
- Interferon alpha-7
- Interleukin-2
- Interferon alpha-21
- Interferon alpha/beta receptor 2
- Interferon gamma receptor 1
- Tyrosine-protein kinase JAK2
Sequence:
MALSFSLLMAVLVLSYKSICSLGCDLPQTHSLGNRRALILLGQMGRISPFSCLKDRHDFRIPQEEFDGNQFQKAQAISVLHEMIQQTFNLFSTEDSSAAWEQSLLEKFSTELYQQLNDLEACVIQEVGVEETPLMNEDSILAVRKYFQRITLYLIERKYSPCAWEVVRAEIMRSLSFSTNLQKRLRRKD
Protein: Nuclear speckle splicing regulatory protein 1 homolog (Coiled-coil domain-containing protein 55 homolog) (O14009)
Organism: Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Interaction partners:
- Pre-mRNA-splicing factor cdc5
Sequence:
MSGTGFRYGLNVMKKKKPNESSNRITFTEDDSSSSEQEHAPIPNSFSSQITAASDASKDDNYDASIYGFDEFYDSMKSAEREQMELKRLESKDRRPKYMENLIESAKKRKRDLLLARERALLKKNELEGDDATEKFVTSSYKKHREEVQKAIEDRKEEDEKSITDTTTGMKDFYASMLDRQEKIHQAAVEGVQNSKKTGAEIGDAMKGQDTLGSDNLILEAKKKGLKLELNDNNEIVDQRQILTAGLNIRKSSANNSMRDDKKRNHKSSYKRSLSPSTRYHQDRPDKRHGTYSLEEIDKQRKEFENRQRLQKEKEFQKSREAALKIHASRNTTETQVQSARERYLQRKKKAATNP
Protein: Small ribosomal subunit protein uS7 (30S ribosomal protein S7) (P02359)
Organism: Escherichia coli (strain K12)
Function: One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, where it has been shown to contact mRNA. Has been shown to contact tRNA in both the P and E sites; it probably blocks exit of the E site tRNA.
Interaction partners:
- Small ribosomal subunit protein uS15
- Large ribosomal subunit protein uL1
- Protein translocase subunit SecY
- Small ribosomal subunit protein uS9
- Large ribosomal subunit protein uL29
- Large ribosomal subunit protein bL12
- Large ribosomal subunit protein bL27
- Small ribosomal subunit protein uS8
- Large ribosomal subunit protein uL10
- Large ribosomal subunit protein uL11
Sequence:
MPRRRVIGQRKILPDPKFGSELLAKFVNILMVDGKKSTAESIVYSALETLAQRSGKSELEAFEVALENVRPTVEVKSRRVGGSTYQVPVEVRPVRRNALAMRWIVEAARKRGDKSMALRLANELSDAAENKGTAVKKREDVHRMAEANKAFAHYRWLSLRSFSHQAGASSKQPALGYLN
Protein: T. brucei spp.-specific protein (Q38BH9)
Organism: Trypanosoma brucei brucei (strain 927/4 GUTat10.1)
Interaction partners:
Sequence:
MESRCLSSATYTQKCVELDRLIRNHLIQCHIVIKALKTRLHDAEEDVKRLKHDRCLLMTKLTEEKSKCETLKSVHADLEKVSANEFHRQQKAIQERERELQVRTKHLDVRAKECERWAHHLKGMEDKLFAQQIRLESIKASLEGDMELVHRWVEGGYGRTENLGRESRHFLERSNSQALCTRHCRCDAEAAFCNERECFYLEKEETLQRLSIMQQELFFVNKIISSRVSHVLLVEENLMGVQTWINRKDFRDSVPIRTKGEGPVYSKLTEGQLTNSKGWMTGGQYVEYPNASESVNSLEVGLSLKAEESHLDRLKQFEKLLTMSLEE