wanglab/gogpt-training-data huggingface dataset:
Protein: TBC1 domain family member 25 (Q3MII6)
Organism: Homo sapiens (Human)
Function: Acts as a GTPase-activating protein specific for RAB33B. Involved in the regulation of autophagosome maturation, the process in which autophagosomes fuse with endosomes and lysosomes.
Subcellular location: Cytoplasm {ECO:0000269|PubMed:21383079}. Cytoplasmic vesicle, autophagosome {ECO:0000269|PubMed:21383079}. Note=It is dispersed in the cytoplasm under nutrient-rich conditions. Localizes at autophagosomes under cell starving conditions.
Interaction partners:
- Gamma-aminobutyric acid receptor-associated protein-like 2
- GABA type A receptor associated protein like 1
- Ras-related protein Rab-33B
- Gamma-aminobutyric acid receptor-associated protein
- Ras-related protein Rab-33A
- Microtubule-associated protein 1 light chain 3 beta
- Transcription factor E3
- Ubiquitin carboxyl-terminal hydrolase 6
- Cell division cycle protein 16 homolog
- ETS domain-containing protein Elk-1
Sequence:
MATASGASDLSGSGAPPPGVGAQAAAAAEEEEREVVRVRVKKCESFLPPEFRSFAVDPQITSLDVLQHILIRAFDLSGKKNFGISYLGRDRLGQEVYLSLLSDWDLSTAFATASKPYLQLRVDIRPSEDSPLLEDWDIISPKDVIGSDVLLAEKRSSLTTAALPFTQSILTQVGRTLSKVQQVLSWSYGEDVKPFKPPLSDAEFHTYLNHEGQLSRPEELRLRIYHGGVEPSLRKVVWRYLLNVYPDGLTGRERMDYMKRKSREYEQLKSEWAQRANPEDLEFIRSTVLKDVLRTDRAHPYYAGPEDGPHLRALHDLLTTYAVTHPQVSYCQGMSDLASPILAVMDHEGHAFVCFCGIMKRLAANFHPDGRAMATKFAHLKLLLRHADPDFYQYLQEAGADDLFFCYRWLLLELKREFAFDDALRMLEVTWSSLPPDPPEHEVELVGPPSQVADAGFGGHRGWPVRQRHMLRPAGGGGSTFEDAVDHLATASQGPGGGGRLLRQASLDGLQQLRDNMGSRRDPLVQLPHPAALISSKSLSEPLLNSPDPLLSSFSHPDSPSSSSPPSTQEASPTGDMAVGSPLMQEVGSPKDPGKSLPPVPPMGLPPPQEFGRGNPFMLFLCLAILLEHRDHIMRNGLDYNELAMHFDRLVRKHHLGRVLRRARALFADYLQSEVWDSEEGAEATAAS
Protein: Conserved protein (O53979)
Organism: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Interaction partners:
- Ribonucleoside-diphosphate reductase subunit beta nrdF1
- Fluoroquinolones export permease protein Rv2687c
- Fluoroquinolones export permease protein Rv2686c
- Anti-sigma-M factor RsmA
- Mycolipanoate synthase
- Transmembrane protein
- Probable conserved transmembrane protein rich in alanine and arginine and proline
- Uncharacterized protein Rv2633c
- Uncharacterized protein Rv0955
Sequence:
MGEANIREQAIATMPRGGPDASWLDRRFQTDALEYLDRDDVPDEVKQKIIGVLDRVGTLTNLHEKYARIALKLVSDIPNPRILELGAGHGKLSAKILELHPTATVTISDLDPTSVANIAAGELGTHPRARTQVIDATAIDGHDHSYDLAVFALAFHHLPPTVACKAIAEATRVGKRFLIIDLKRQKPLSFTLSSVLLLPLHLLLLPWSSMRSSMHDGFISALRAYSPSALQTLARAADPGMQVEILPAPTRLFPPSLAVVFSRSSSAPTESSECSADRQPGE
Protein: Deoxycytidine kinase (dCK) (EC 2.7.1.74) (Deoxyadenosine kinase) (EC 2.7.1.76) (Deoxyguanosine kinase) (EC 2.7.1.113) (P48769)
Organism: Rattus norvegicus (Rat)
Function: Phosphorylates the deoxyribonucleosides deoxycytidine, deoxyguanosine and deoxyadenosine.
Subcellular location: Nucleus {ECO:0000250|UniProtKB:P27707}.
Interaction partners:
- Cytidine deaminase
- Deoxycytidylate deaminase
- UMP-CMP kinase
- Cytosolic purine 5'-nucleotidase
- Adenosine kinase
- UMP-CMP kinase 2, mitochondrial
- Adenine phosphoribosyltransferase
- Adenylosuccinate lyase
- 3',5'-cyclic-AMP phosphodiesterase 4D
- Purine nucleoside phosphorylase
Sequence:
MATPPKRFCSSPSTSSEGTRIKKISIEGNIAAGKSTFVNILKQVCEDWEVVPEPVARWCNVQSTQDEFEELTTSQKSGGNVLQMMYEKPERWSFIFQSYACLSRIRAQLASLNGSLRDAEKPVLFFERSVYSDRYIFASNLYESDCMNETEWTIYQDWHDWMNSQFGQSLELDGIIYLRATPEKCLNRIYIRGRDEEQGIPLEYLEKLHYKHESWLLHRTLKTNFEYLQEVPILTLDVNLDFKDKEESLVEKVKEFLSTT
Protein: DNA replication licensing factor MCM5 (EC 3.6.4.12) (Q6NV07)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Subcellular location: Nucleus {ECO:0000256|ARBA:ARBA00004123, ECO:0000256|RuleBase:RU368063}.
Interaction partners:
Sequence:
MSGFDDPGVYYSDSFGGGESVGDEGVVKRSQIKKKFREFLRQFRVGTDRTGFTYKYRDELKRHYTLGEYWIEVEMEDLASFDEDLSDCLYKLPSENLPLLEEAAQEVADEVTRPRPVGEETVQDIQVMLKSDAHPASIRSLKSEQVSRLVKIPGIIISSTAVRAKATRVCLQCRGCRAVISNIPLPPGLQGYALPRKCNTEQAGRVKCPVDPYFIIPDRCVCVDFQTQRLQEAPDAVPHGEMPRHMQLYCDRYLCDRVVPGNRVTVMGIYSIKKVAQTKAKGRDKGTGVGIRSAYLRVVGIDVDTEGAGRGATGSVSPQEEEELRSLAASPSVYDSLARSLAPSIYGSDDLKKAIACLLFGGSRKRLPDGLTRRGDINLLMLGDPGTAKSQLLKFVERCSPIGVYTSGKGSSAAGLTASVLRDPTTRGFVMEGGAMVLADGGVVCIDEFDKMREDDRVAIHEAMEQQTISIAKAGITTTLNSRCSVLAAANSVFGRWDDTKGEDNIDFMPTILSRFDMIFIIKDHHDQQRDMTLARHVMNVHLSAQTQTEGVEGEIPLATLKKYIAYSRVKCGPRLSAAAAEKLKNRYVLMRSGAKEHERETDRRVSIPITVRQLEAVVRIAESLAKMKLQPIAGEEEVDEALRLFQVSTLDAALSGSLSGVEGFTTQEDQEMISRIEKQLKRRFAIGSQVSEHSIIQDFAKQKYPEHAIQKVLYLMLRRGELQHRMQRKVLYRVK
Protein: Maestro heat-like repeat-containing protein family member 1 (HEAT repeat-containing protein 7A homolog) (Q54F23)
Organism: Dictyostelium discoideum (Social amoeba)
Interaction partners:
- WASH complex subunit 2
- WASH complex subunit 4
- WASH complex subunit 3
- WAS protein family homolog DDB_G0292878
- WASH complex subunit 5
Sequence:
MSKKNQQISPVLDNIVTSLLQSLSDSDESVRSTVVNSLYEIGFRQPNFVLQVACDYINKNQKIDQTHRVKILNSILQILEQTRNQLTDALSLNLIAMSISEMTRDKEVVPDWQQVASSLLVSLGLRYPSQIMDELLKRFEPGTLPHYFVMKTLGDFISSNPIPTVPKIREILSRILPVLGTIKHDNFKWVFAAALGHFADAIVQYVANIDTAPDKSLTLYSFSSEFYPALELMFSKWLGTNHEKVRLVTIEAVGSICSILSVEQLESQIQKLVVGVLSMLKKEKDLLPVTHSLCCILEVCVKNDLKLQVNELLIPIMTTLHPLVCIVPDYSNPASTKTYNEVLRCFEVIGRGYSDVLISFLNQRLENRDLRSRAGSLSIIRHIVTRLDVELADKKPLILSAIKPLIQTEPSLFIKKYLAQIIIAMAPYGYLEMEGGLTLLEFIVKGSSWYQDSEIGKAQPTQPPKKIENPDLHVTDSELRLICDNILNLITTTMPQLESILWPYLFEFILPEQYTAAIPVVTKSLTYIALSKKSVDSDDYYIDFDKEINLPKPTQIIARYFVLLTAPLRRNQLGIRILENMKAIGPILHPSICDMWDVTLPKLISYLEDHTDIETWNKNQWEELVLRLLSETIKNAADDEWTVALGNSMSEQIDHYKKDPILKRSLYKQMGLIMQKCSHKEFVKSKIEVMFTSVDYTNSLENEGCAIGLGYCGASHFDIVLEKINFYIKNSMVKKSGFFGKKGPKGIKNCILLSLGYSATYAQSALFSSRVEVHVIQPIKPSILQLKKVPKKLSSIKMIDLIGKALHPNKASTFIFKQRDELMKLLISYMSTPPPSTNNQVKIDGTNACSTLVNLEPMISLELEVQIINLSLSFFNQQVSPANATNTDSDEYKEVNSLITSVNNLLSTILYNQTTIACLNRLIGYLDPLSRSKDAHIRERSLFCILYLVKKFIEYSTDSDSMPTDKLFDSIGTTLSVLIPRCTDPEINVRRYAVESIQLILYIGFMLKNATPDNRRVKPSEVLHPLTSIRDSITTTEVNEQFSLVFEISVIISKMISLEEIPKFLEGSIKGLQDLQAFSTNGSCIIINGLIKTRGEELIEYVPILVKGLLTAMEGITSETTMNGTLVSLRSLANHHLIPVLSVLLEYPMPHSVHVIKSFQIIAKDKNLISPTLIHLMDLLNNKPVYEEKPDPKNKNRIIPQPFAIALAATCSLGEIFQLTEVEEVVKYFYHQLISTLVLRAGTCNNSLPCLIEVASTNPKAKASAISLIPSQQMLVTFRQFFKCTKEEETLLAEIESKGSFSQLETPFYHQGIIEILSVVSSHHPDLIQGIFQYLLPYQRSNHLEHRIVTISVTTELINHCKDKELIQRLINTLLNSLVDPLVKLISLKGLSNIVSAGVEQTNRYAPTVIDALSTSIDDQDETMAMECMLGLSKIFEVADEGRVAPILVNICNRIRPAFEKPNDSIRAASFQLFGSLWRFGSGSACDPFYEQIHSSLPSLIMHLNDDVQSVKNSCKKTLFQLSTLMRSQDAMDYFNNKSKGFVGDNDQPNYEEFLLDFSKLLIINYPERVNYFVMTVIEFFKSTWVNLRGNAATFIGFILGNLTEDKRTQTNINSTILTKSLVGLLAEKSPAVRKKAAESLGLLHHY
Protein: Heat shock protein beta-2 (HspB2) (O35878)
Organism: Rattus norvegicus (Rat)
Function: May regulate the kinase DMPK.
Subcellular location: Cytoplasm {ECO:0000250}. Nucleus {ECO:0000250}. Note=Localizes to nuclear foci. {ECO:0000250}.
Interaction partners:
- Mitogen-activated protein kinase 14
- mitogen-activated protein kinase
- Mitogen-activated protein kinase 12
- Heat shock protein beta-3
- Mitogen-activated protein kinase 13
- Heat shock protein beta-7
- Heat shock protein family B
- Alpha-crystallin B chain
- RAC-alpha serine/threonine-protein kinase
- Heat shock protein beta-8
Sequence:
MSGRTVPHAHPATAEYEFANPSRLGEQRFGEGLLPEEILTPTLYHGYYVRPRAARAGEGGRAGASELRLSEGKFQAFLDVSHFTPDEVTVRTVDNLLEVSARHPQRLDRHGFVSREFCRTYVLPADVDPWRVRAALSHDGILNLEAPRGGRHLDTEVNEVYISLLPAPPDPEEEEEVARVEP
Protein: Kappa-casein (E7E1P7)
Organism: Bos taurus (Bovine)
Subcellular location: Secreted {ECO:0000256|ARBA:ARBA00004613}.
Interaction partners:
Sequence:
IQYVLSRYPSYGLNYYQQKPVALINNQFLPYPYYAKPAAVRSPAQILQWQVLSNTVPAKSCQAQPTTMARHPHPHLSFMAIPPKKNQDKTEIPTINTIASGEPTSTPITEAVESTVATLEDSPEVIESPPEINTVQVTSTAV
Protein: Protein 7.3 (Gene product 7.3) (Gp7.3) (P03751)
Organism: Escherichia phage T7 (Bacteriophage T7)
Function: Plays an essential role most probably in virion tail assembly. May form a scaffold around which gp11 and gp12 polymerize. Gets ejected from the infecting particle into the bacterial cell.
Subcellular location: Virion {ECO:0000269|PubMed:16054667}. Note=Component of the tail.
Interaction partners:
Sequence:
MGKKVKKAVKKVTKSVKKVVKEGARPVKQVAGGLAGLAGGTGEAQMVEVPQAAAQIVDVPEKEVSTEDEAQTESGRKKARAGGKKSLSVARSSGGGINI
Protein: Cytospin-A (E7FG55)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Subcellular location: Cytoplasm, cytoskeleton, spindle {ECO:0000256|ARBA:ARBA00004186, ECO:0000256|RuleBase:RU367063}. Cytoplasm, cytoskeleton {ECO:0000256|RuleBase:RU367063}. Cell junction, gap junction {ECO:0000256|RuleBase:RU367063}.
Interaction partners:
Sequence:
MKKATKPTAATSRTSVGTKAPGRSEGSSNMGTGGKMTNKTQSSAPLSKAKSSDDLPAVSAGSGSVSASNSNTTARNKRGSSSQITSNTETRSKTTSGLSGRRATSTVSKEPGLTRDNLRERSRTSVAKKPTDTMPQKRSRCRTLPDSESKMSKSRSDSQISHKAVLECQVNDLLGLAKSKDLEILHLRSELRGMRTQLGLEELEAPNQEQVSQETMQPPEKEVISATDVESTLLLLQDQNQGILDELNMLKSENRMLKDRLNALGFSLEQRLDSPEKSLRCLPMSPEHVVGGDSSSGGHSESVRGGMRASSAEGSAQGSTEDLLSEQRHLGSPDAVDSECSEAYQPITSSDDALDAPSGCGSSSESEGGLPSREHSRRGSSGNTSEVSVACLTERIHQMEENQHSTSEELQATLQELADLQQITQELSTENERLGEERAILVDSLCQQGERLELYGRQLEYFRGLLDEHCVAYVKDDEDAKSGRYVELERRYAELNEGSRFEREQLLGVQQQLSSALKMAEHENAEAQGLMAALKERVIMAERAVEIERRERAVAKAELEALRVLSEGEQVELNRCRIQLEQERQRVAQLLSIHNAGDKTDIRHLLESERLDKERAEAKAAQLKEELGHTRSEAAQLQEAISKLEDEFRAFRDDVQSQLAEQKRLLEQQCSELEEKDTEIADMKETIFELEDEVEQHRAVKLHDNLIISDLENSIKKLHDQKYDMEKEIKVLHRKLREESAEWRQFQADLQTAVIIANDIKTEAQEEIGDLRRRLQEAQEKNEKMNKELEELKSRKQDEERGRVYNYMNAVERDLAALRQGMGLSRRSSTSSEPSPTVKTLIKSFDSASQGPVQGSPTAAAAAVAAATAISRTPLSPSPVKTPPAAAVSPIQRHTISSKPLSSMLDKRPSFNDLNIPAEHLLRTSPVTRPGCPIQRVTNMDTSKAISVSRRSSEELKRDLLAPESSAPSSLMSSPQLSLSSNASSPTASITPTTRGRLREERKDPLSALAREYGGSKRNALLRWCQKKTEGYQNIDITNFSSSWNDGLAFCAILHTYLPAHIPYHELNSLDKRRNFTLAFQAAESVGIKSTLDIGEMVHTERPDWQSVMTYVTSIYKYFET
Protein: (thale cress) hypothetical protein (ATE1) (A0A178WKP3)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Interaction partners:
Sequence:
MAAVQQQQAMQKNTLYVGGLADEVNESILHAAFIPFGDIKDVKTPLDQANQKHRSFGFVTFLEREDASAAMDNMDGAELYGRVLTVNYALPEKIKGGEQGWAAHPLWADADTWFERQQQEKEILKMQAENKAAMETAEELHRKKLAEDRQGEMEEDTDTKNDPMARAEADALSHGDA
Protein: Globin c1 (Hemoglobin alpha, adult chain 3) (Q63910)
Organism: Rattus norvegicus (Rat)
Interaction partners:
- Hemoglobin subunit beta-1
- Globin b1
- Epsilon 3 globin
- Haptoglobin
- Hemoglobin alpha, adult chain 2
- Globin a1
- Hemoglobin subunit beta like 1
- Hemoglobin subunit beta-2
- Epsilon 2 globin
- Alpha-hemoglobin-stabilizing protein
Sequence:
MVLSEEDKNNIKKAWVKIGNHAAEIGAETIGRLFIVFPSSKTYFPHFNTSEGSDQVKAHGKKVADALTNAASHLDDLPGALSTLSDLHAHKLRVDPVNFKFLSHCLLVTLASHHPGDFTPAMHASLDKFFASVSTVLTSKYR
Protein: Pyruvate dehydrogenase phosphatase regulatory subunit, mitochondrial (PDPr) (Q8NCN5)
Organism: Homo sapiens (Human)
Function: Decreases the sensitivity of PDP1 to magnesium ions, and this inhibition is reversed by the polyamine spermine.
Subcellular location: Mitochondrion matrix {ECO:0000250}.
Interaction partners:
- Glycine dehydrogenase
- [Pyruvate dehydrogenase [acetyl-transferring]]-phosphatase 1, mitochondrial
- [Pyruvate dehydrogenase [acetyl-transferring]]-phosphatase 2, mitochondrial
- Glycine cleavage system H protein, mitochondrial
- Pyruvate dehydrogenase protein X component, mitochondrial
- Glycine cleavage system H protein
- Glycine cleavage system H protein
- Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial
- Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial
- Methylenetetrahydrofolate reductase
Sequence:
MMFYRLLSIVGRQRASPGWQNWSSARNSTSAAEARSMALPTQAQVVICGGGITGTSVAYHLSKMGWKDIVLLEQGRLAAGSTRFCAGILSTARHLTIEQKMADYSNKLYYQLEQETGIQTGYTRTGSIFLAQTQDRLISLKRINAGLNVIGIPSEIISPKKVAELHHLLNVHDLVGAMHVPEDAVVSSADVALALASAASQNGVQIYDRTSVLHVMVKKGQVTGVETDKGQIECQYFVNCAGQWAYELGLSNEEPVSIPLHACEHFYLLTRPLETPLQSSTPTIVDADGRIYIRNWQGGILSGGFEKNPKPIFTEGKNQLEIQNLQEDWDHFEPLLSSLLRRMPELETLEIMKLVNCPETFTPDMRCIMGESPAVQGYFVLAGMNSAGLSFGGGAGKYLAEWMVHGYPSENVWELDLKRFGALQSSRTFLRHRVMEVMPLMYDLKVPRWDFQTGRQLRTSPLYDRLDAQGARWMEKHGFERPKYFVPPDKDLLALEQSKTFYKPDWFDIVESEVKCCKEAVCVIDMSSFTKFEITSTGDQALEVLQYLFSNDLDVPVGHIVHTGMLNEGGGYENDCSIARLNKRSFFMISPTDQQVHCWAWLKKHMPKDSNLLLEDVTWKYTALNLIGPRAVDVLSELSYAPMTPDHFPSLFCKEMSVGYANGIRVMSMTHTGEPGFMLYIPIEYALHVYNEVMSVGQKYGIRNAGYYALRSLRIEKFFAFWGQDINNLTTPLECGRESRVKLEKGMDFIGRDALLQQKQNGVYKRLTMFILDDHDSDLDLWPWWGEPIYRNGQYVGKTTSSAYSYSLERHVCLGFVHNFSEDTGEEQVVTADFINRGEYEIDIAGYRFQAKAKLYPVASLFTQKRRKDDMELSDLHGK
Protein: Threonine--tRNA ligase editing subunit (Ser-tRNA(Thr) hydrolase) (Threonyl-tRNA synthetase editing subunit) (ThrS-ed) (Q980D1)
Organism: Saccharolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) (Sulfolobus solfataricus)
Function: Freestanding tRNA editing subunit of threonine--tRNA ligase, the catalytic subunit is AC Q97VW8. Deacylates (edits) mischarged L-seryl-tRNA(Thr) in trans, removing L-serine, has no aminoacylation activity. In vitro when both subunits are present, or if the 2 subunits are fused, L-seryl-tRNA(Thr) is no longer produced. Has no activity on correctly acylated L-seryl-tRNA(Ser) or L-threonyl-tRNA(Thr). Editing is probably catalyzed by the 2'-OH of A76 of tRNA(Thr) (By similarity).
Subcellular location: Cytoplasm {ECO:0000305}.
Interaction partners:
- Threonine--tRNA ligase catalytic subunit
- Valine--tRNA ligase
- Probable translation initiation factor IF-2
- Large ribosomal subunit protein uL11
- Small ribosomal subunit protein uS12
- Large ribosomal subunit protein uL15
- Small ribosomal subunit protein uS15
- Small ribosomal subunit protein uS11
- Large ribosomal subunit protein uL3
- Small ribosomal subunit protein uS14
Sequence:
MIILFIHASDFSFNVKERAIKEPEEAKLKSIELKNTLVCFTTVEKGDDEEILSKAIDDILDVYSKVKADSVVIYPYAHLSSNLANPDTAIKILESLENLLKDKVKVYRAPFGWYKAFSISCYGHPLSELSRRIRKTEELEKSEELKYCEKFGFPSSSESAFMRRATIGYLRNLFQPLFESENNENVRDGEMSILYQNVESGRILPCINENPRIVVVYGGVRELNFPKEINDSKNRIRVWWVNESKIYVDVGRLIYYFILESVKQQPPTLPDWLNPIQVRLLPVKKDFLDFSIQVAERLRKEGIRVNIDDLDDSLGNKIRRAGTDWIPFVIVIGEREVKTNTLTVKIRARNEQKSMTVEELVKEIKDEVKERQNLPLYYTLYRHKNN
Protein: Probable oligoribonuclease (EC 3.1.15.-) (RNA exonuclease 2 homolog) (Q556Y2)
Organism: Dictyostelium discoideum (Social amoeba)
Function: 3'-to-5' exoribonuclease specific for small oligoribonucleotides.
Interaction partners:
- RNA exonuclease 1
- Phosphoglucomutase-1
Sequence:
MSTTPTYNHPVINERSKRMVWVDLEMTGLDISKDVILEMAIVITDAELNVIEKGPNLVIHRSDEVLKNMNDWCIEHHGKSGLTEDVRNSKISLEEAEKIMLEFVRKHTDKGICPLAGNTVHEDRRFLLKEMPTFAEHLHYRIIDVSTIKELSRRWYPYIPSPKKVCGHRALQDIEESIEELKSYRVTVFK
Protein: Transforming acidic coiled-coil containing protein 2 (D6RAA5)
Organism: Homo sapiens (Human)
Subcellular location: Cytoplasm, cytoskeleton {ECO:0000256|ARBA:ARBA00004245}.
Interaction partners:
Sequence:
MGGSQSLQPAPASDLNLEASEAMSSDSEEAFETPESTTPVKAPPAPPPPPPEVIPEPEVSTQPPPEEPGCGSETVPVPDGPRSDSVEGSPFRPPSHSFSAVFDEDKPIASSGTYNLDFDNIELVDTFQTLEPRASDAKNQEGKVNTRRKSTDSVPISKSTLSRSLSLQASDFDGASSSGNPEAVALAPDAYSTGSSSASSTLKRTKKPRPPSLKKKQTTKKPTETPPVKETQQEPDEESLVPSGENLASETKTESAKTEGPSPALLEETPLEPAVGPKAACPLDSESAEGVVPPASGGGRVQNSPPVGRKTLPLTTAPEAGEVTPSDSGGQEDSPAKGLSVRLEFDYSEDKSSWDNQQENPPPTKKIGKKPVAKMPLRRPKMKKTPEKLDNTPASPPRSPAEPNDIPIAKGTYTFDIDKWDDPNFNPFSSTSKMQESPKLPQQSYNFDPDTCDESVDPFKTSSKTPSSPSKSPASFEIPASAMEANGVDGDGLNKPAKKKKTPLKTMVEDVMSVCSLFDTFRVKKSPKRSPLSDPPSQDPTPAATPETPPVISAVVHATDEEKLAVTNQKWTCMTVDLEADKQDYPQPSDLSTFVNETKFSSPTEELDYRNSYEIEYMEKIGSSLPQDDDAPKKQALYLMFDTSQESPVKSSPVRMSESPTPCSGSSFEETEALVNTAAKNQHPVPRGLAPNQESHLQVPEKSSQKELEAMGLGTPSEAIEITAPEGSFASADALLSRLAHPVSLCGALDYLEPDLAEKNPPLFAQKLQREAAHPTDVSISKTALYSRIGTAEVEKPAGLLFQQPDLDSALQIARAEIITKEREVSEWKDKYEESRREVMEMRKIVAEYEKTIAQMIEDEQREKSVSHQTVQQLVLEKEQALADLNSVEKSLADLFRRYEKMKEVLEGFRKNEEVLKRCAQEYLSRVKKEEQRYQALKVHAEEKLDRANAEIAQVRGKAQQEQAAHQASLRKEQLRVDALERTLEQKNKEIEELTKICDELIAKMGKS
Protein: PMS1 homolog 2, mismatch repair system component (A0A8I5ZND0)
Organism: Rattus norvegicus (Rat)
Interaction partners:
Sequence:
MEPTEGASTECAKAIKPIDGKSVHQICSGQVVLSLSTAVKELIENSVDAGATSIDLRLKDYGVDLIEVSDNGCGVEEENFEGLALKHHTSKIREFADLTQVETFGFRGEALSSLCALSDVTISTCHVSASIGTRLVLDHNGKIIQKTPCPRPKGTTVSVQNLFYTLPVRHKEFQRNIKKEYAKMVQVLQAYCIISAGIRVSCTNQLGQGKRQPVVCTSGSSGMKENIGSVFGQKQLQSLVPFVQLPPSDSVCEEYCLSACGTPQSPFRKSMFAEMEILGQFNLGFIVTKLKEDLFLVDQHAADEKYNFEMLQQHTVLQAQRLITPQTLNLTAVNEAVLIENLEIFRKNGFDFIIDEDAPVTERAKLISLPTSKNWTFGPQDIDELIFMLSDSPGVMCRPSRVRQMFASRACRKSVMIGTALSASEMKKLISHMGEMDHPWNCPHGRPTMRHIANLDVISQN
Protein: KH domain-containing protein YLL032C (Q07834)
Organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Subcellular location: Cytoplasm {ECO:0000269|PubMed:14562095}.
Interaction partners:
- Uncharacterized protein YML119W
- Regulator of rDNA transcription protein 7
- Putative uncharacterized protein YLL037W
- mRNA-binding protein PUF2
Sequence:
MDNFKIYSTVITTAFLQVPHLYTTNRLWKPIEAPFLVEFLQKRISSKELKNTKAICHIDPSWVNLNASFIRDDMISIKATTDDMDLDAICRISLPLPMNTNDLTAELEKMKRILLDLSEKFNLELIITKEPAYFTPEQTGESKELCIYVHALGFRSNLMECEPQLLAFVDLIKKNGMTLPPQHYIIEPMELNSYSVLPLYMGVDMENFKHISRAFKTSIYAPSLITLSRDLKANPQIFFSGAVHSLSLLARKTLRESISVNSKSFFYRRLTNITPGKLLFIRKYYQQKVNQLILKYQSLIRVTNEYIEFQSISTNLLEMVIKNFTIQVLHEIVEVQISLNENCAMSPELIIDSFFGHTGNQIVVITPKEDSFNQLIVVGNQSSTDEASDTSILHYLSDFIMGSNQVINPNLRQIKAIFEIHPDFEDFISGKKNGKLTRIMELSACLIQLEMEEEDDNLYLNLVSDSFPDFKESFKNVINEFPAEESFFIPEVCHRPIIGTGGSLIQATMRKHNVFIQFSNSFNLPQNKISMIRYDNVIIRCPRKNKANICLAKNDLKQIVQEYDSLQSKTLIRFSSGQYRHILHVNGQKNIIGQIEKNENVYIMIPLKEPLDGTSQLSIQGNDENASRAANELVNSAFGYEYEFKIDQEIDPNKEYEFYNLIVVPFLQIMNIIVTFEKDLITFTFEKDTNENTLTKAIELLSNYLETQKTKIIFKKIIKKFVLGSASSKSNTSNSNTNGNFRSMNNAKSRTTIDNTSQSGASPQRHKMPVITTVGGAQAIKGYIPNTYYNGYGYGYGYTYEYDYNYANSNKAQTNNRHKYQNGRK
Protein: 116 kDa U5 small nuclear ribonucleoprotein component (U5 snRNP-specific protein, 116 kDa) (F1LM66)
Organism: Rattus norvegicus (Rat)
Subcellular location: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
Interaction partners:
- Pre-mRNA-processing-splicing factor 8
- Pre-mRNA-processing factor 6
- U5 small nuclear ribonucleoprotein 200 kDa helicase
- U4/U6 small nuclear ribonucleoprotein Prp4
- Splicing factor 3B subunit 3
- U4/U6 small nuclear ribonucleoprotein Prp31
- Cell division cycle 5-like protein
- Pre-mRNA-splicing factor SYF2
- U4/U6.U5 tri-snRNP-associated protein 1
- SNW domain-containing protein 1
Sequence:
MDTDLYDEFGNYIGPELDSDEDDDELGRETKDLDEMDEDEDEDDVGEHDDDHPGMEVVLHEDKKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIKPVKTKKFTLMEQTLPVTVYEMDFLADLMDNSELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRYDQDLCYTDILFTEQERGVGIKSTPVTVVLPDTKGKSYLFNIMDTPGHVNFSDEVTAGLRISDGVVLFIDAAEGVMLNTERLIKHAVQERLAVTVCINKIDRLILELKLPPTDAYYKLRHIVDEVNGLISMYSTDENLILSPLLGNVCFSSSQYSICFTLGSFAKIYADTFGDINYQEFAKRLWGDIYFNPKTRKFTKKAPSSSSQRSFVEFILEPLYKILAQVVGDVDTSLPRTLDELGIHLTKEELKLNIRPLLRLVCKKFFGEFTGFVDMCVQHIPSPKVGAKPKIEHTYTGGVDSDLGEAMSDCDPDGPLMCHTTKMYSTDDGVQFHAFGRVLSGTIHAGQPVKVLGENYTLEDEEDSQICTVGRLWISVARYHIEVNRVPAGNWVLIEGVDQPIVKTATITEPRGNEEAQIFRPLKFNTTSVIKIAVEPVNPSELPKMLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVVTFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQTKYDWDLLAARSIWAFGPDATGPNILVDDTLPSEVDKALLGSVKDSIVQGFQWGTREGPLCDELIRNVKFKILDAVVAQEPLHRGGGQIIPTARRVVYSAFLMATPRLMEPYYFVEVQAPADCVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFSLSVFHHWQIVPGDPLDKSIVIRPLEPQPAPHLAREFMIKTRRRKGLSEDVSISKFFDDPMLLELAKQDVVLNYPM
Protein: Stathmin (Leukemia-associated phosphoprotein p18) (Metablastin) (Oncoprotein 18) (Op18) (Phosphoprotein p19) (pp19) (Prosolin) (Protein Pr22) (pp17) (P16949)
Organism: Homo sapiens (Human)
Function: Involved in the regulation of the microtubule (MT) filament system by destabilizing microtubules. Prevents assembly and promotes disassembly of microtubules. Phosphorylation at Ser-16 may be required for axon formation during neurogenesis. Involved in the control of the learned and innate fear (By similarity).
Subcellular location: Cytoplasm, cytoskeleton.
Interaction partners:
- Signal transducer and activator of transcription 3
- Cyclin-dependent kinase inhibitor 1B
- Mitogen-activated protein kinase 1
- Mitogen-activated protein kinase 3
- Serine/threonine-protein kinase Kist
- Receptor tyrosine-protein kinase erbB-4
- Cellular tumor antigen p53
- Microtubule-associated protein 4
- Thymidylate synthase
- Cell division control protein 42 homolog
Sequence:
MASSDIQVKELEKRASGQAFELILSPRSKESVPEFPLSPPKKKDLSLEEIQKKLEAAEERRKSHEAEVLKQLAEKREHEKEVLQKAIEENNNFSKMAEEKLTHKMEANKENREAQMAAKLERLREKDKHIEEVRKNKESKDPADETEAD
Protein: ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic (ClpR1) (Protein SUPPRESSOR OF VARIEGATION 2) (nClpP5) (Q9XJ35)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Required for chloroplast development and differentiation.
Subcellular location: Plastid, chloroplast stroma {ECO:0000269|PubMed:10427773, ECO:0000269|PubMed:14593120}.
Interaction partners:
- Chloroplastic ATP-dependent Clp protease proteolytic subunit 1
- ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic
- ATP-dependent Clp protease proteolytic subunit 3, chloroplastic
- ATP-dependent Clp protease proteolytic subunit 4, chloroplastic
- ATP-dependent Clp protease proteolytic subunit 5, chloroplastic
- ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic
- ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic
- ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic
- Chaperone protein ClpC1, chloroplastic
- Clp protease adapter protein ClpF
Sequence:
MATALVSPLTSQLNHEAVCSKFVLPKSPFMSGSKLFSSNMPCSTVPRRTRRSHCFASAKDMSFDHIPKQFRGDNLKDGVMQNFKNVPQYFYGLNSAQMDMFMTEDSPVRRQAEKVTEESISSRNNYLNNGGIWSMSGMNAADARRYSMSVQMYRGGGGGGGSERPRTAPPDLPSLLLDARICYLGMPIVPAVTELLVAQFMWLDYDNPTKPIYLYINSPGTQNEKMETVGSETEAYAIADTISYCKSDVYTINCGMAFGQAAMLLSLGKKGYRAVQPHSSTKLYLPKVNRSSGAAIDMWIKAKELDANTEYYIELLAKGTGKSKEQINEDIKRPKYLQAQAAIDYGIADKIADSQDSSFEKRDYDGTLAQRAMRPGGGSPAAPAGLR
Protein: Spermatogenesis associated 22 (A0A0G2K3H6)
Organism: Rattus norvegicus (Rat)
Interaction partners:
Sequence:
LLWLLTDGFTGCLPVPLFNQKKRNRQPLTSNPLQSDPGIGTVSDTYGFPSLPTDWAWEAVNPVVAPLKKTVNTGQIPASASYPLRIEDPVCKSIESNAKRSQGGGGYRGNNRNTSSRTWDRNDFRPQHKTVSPAANSEFSSGPVNLGAQRQKQFQTPEFPNLPGHKEAEVPRQTYLSKLPGSTMKGPDRASALQAFKPSFQQNPFNKTVLGDVPRENSLKETTLYQLKEKDNSLRIISAVIESMKYWQAQVKKTVLLFEVLAVLDSAVTPGPHYSKTFLMRDGKNILPCVFYEIDRELPRLIRGRVHRCVGHYDPHKNIFKCVSVRPASASEQKTFQAFVTIVDAEMKYHTKVMNEM
Protein: Sm protein F (Q570S3)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Subcellular location: Nucleus {ECO:0000256|ARBA:ARBA00004123, ECO:0000256|PIRNR:PIRNR006609}.
Interaction partners:
- Small nuclear ribonucleoprotein Sm D2
- Small nuclear ribonucleoprotein SmD1b
- Small nuclear ribonucleoprotein E
- Small nuclear ribonucleoprotein SmD1a
- Small nuclear ribonucleoprotein SmD3b
- Probable small nuclear ribonucleoprotein G
- Small nuclear ribonucleoprotein E
- Small nuclear ribonucleoprotein G
- Small nuclear ribonucleoprotein SmD3a
- Sm-like protein LSM2
Sequence:
MEYKGFLASVDSYMNLQLGNTEEYIDGQLTGNLGEILIRCNNVLYVRGVPEDEELEDADQD
Protein: Lutropin subunit beta (Luteinizing hormone subunit beta) (LH-B) (LSH-B) (LSH-beta) (Lutropin beta chain) (P04651)
Organism: Bos taurus (Bovine)
Function: Promotes spermatogenesis and ovulation by stimulating the testes and ovaries to synthesize steroids.
Subcellular location: Secreted.
Interaction partners:
- Glycoprotein hormones alpha chain
- Lutropin-choriogonadotropic hormone receptor
- Carbohydrate sulfotransferase
Sequence:
MEMFQGLLLWLLLGVAGVWASRGPLRPLCQPINATLAAEKEACPVCITFTTSICAGYCPSMKRVLPVILPPMPQRVCTYHELRFASVRLPGCPPGVDPMVSFPVALSCHCGPCRLSSTDCGGPRTQPLACDHPPLPDILFL
Protein: Histone chaperone ASF1B (Anti-silencing function protein 1-like protein b) (Anti-silencing function 1b protein) (Silencing group A protein 1) (Q9LS09)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Histone chaperone that facilitates histone deposition and histone exchange and removal during nucleosome assembly and disassembly.
Subcellular location: Nucleus {ECO:0000250}.
Interaction partners:
- Serine/threonine-protein kinase TOUSLED
- Chromatin assembly factor 1 subunit FAS2
- Protein HIRA
- Histone H4
- Tetratricopeptide repeat
- Chromatin assembly factor 1 subunit FAS1
- Histone H3-like centromeric protein CENH3
- Histone H3.1
- Histone H3.3
- Histone H3-like 5
Sequence:
MSSINITNVTVLDNPAPFVNPFQFEISYECLTSLKDDLEWKLIYVGSAEDETYDQVLESVLVGPVNVGNYRFVLQADSPDPLKIREEDIIGVTVLLLTCSYMDQEFIRVGYYVNNDYDDEQLREEPPTKVLIDKVQRNILTDKPRVTKFPINFHPENEQTLGDGPAPTEPFADSVVNGEAPVFLEQPQKLQEIEQFDDSDVNGEAIALLDQPQNLQET