wanglab/gogpt-training-data huggingface dataset:
Protein: Probable LRR receptor-like serine/threonine-protein kinase At1g51810 (EC 2.7.11.1) (Q9FZB8)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Subcellular location: Membrane {ECO:0000305}; Single-pass type I membrane protein {ECO:0000305}.
Interaction partners:
- Uncharacterized protein T14D3.50
- Carboxyl-terminal proteinase-like protein
- Probable serine protease EDA2
- UBP1-associated proteins 1A
- Pathogenesis-related thaumatin superfamily protein
- Probable disease resistance protein At1g63360
- DGCR14-like protein
- Putative disease resistance protein At1g63350
- Probable lysophospholipase BODYGUARD 2
- Ras-related protein RABG3a
Sequence:
MERHCLFFVIFSLILHLVQAQDPIGFINLDCGLSIQGSPYKESSTGLTYTSDDGFVQSGKIGKITKELESLYKKPERTLRYFPDGVRNCFSLNVTRGTKYLIKPTFLYGNYDGRNVIPDFDLYIGPNMWITVNTDNTIKEILHVSKSNTLQVCLVKTGTSIPYINTLELRPLADDIYTNESGSLNYLFRVYYSNLKGYIEYPDDVHDRIWKQILPYQDWQILTTNLQINVSNDYDLPQRVMKTAVTPIKASTTTMEFPWNLEPPTSQFYLFLHFAELQSLQANETREFNVVLNGNVTFKSYSPKFLEMQTVYSTAPKQCDGGKCLLQLVKTSRSTLPPLINAMEAYTVLDFPQIETNVDEVIAIKNIQSTYGLSKTTWQGDPCVPKKFLWDGLNCNNSDDSTPPIITSLNLSSSGLTGIIVLTIQNLANLQELDLSNNNLSGGVPEFLADMKSLLVINLSGNNLSGVVPQKLIEKKMLKLNIEGNPKLNCTVESCVNKDEEGGRQIKSMTIPIVASIGSVVAFTVALMIFCVVRKNNPSNDEAPTSCMLPADSRSSEPTIVTKNKKFTYAEVLTMTNNFQKILGKGGFGIVYYGSVNGTEQVAVKMLSHSSAQGYKQFKAEVELLLRVHHKNLVGLVGYCEEGDKLALIYEYMANGDLDEHMSGKRGGSILNWGTRLKIALEAAQGLEYLHNGCKPLMVHRDVKTTNILLNEHFDTKLADFGLSRSFPIEGETHVSTVVAGTIGYLDPEYYRTNWLTEKSDVYSFGVVLLVMITNQPVIDQNREKRHIAEWVGGMLTKGDIKSITDPNLLGDYNSGSVWKAVELAMSCMNPSSMTRPTMSQVVFELKECLASESSREVSMTFGTEVAPMAR
Protein: Histone-lysine N-methyltransferase SETD7 (EC 2.1.1.364) (SET domain-containing protein 7) (A0A8I6GI35)
Organism: Rattus norvegicus (Rat)
Subcellular location: Chromosome {ECO:0000256|ARBA:ARBA00004286}. Nucleus {ECO:0000256|ARBA:ARBA00004123}.
Interaction partners:
Sequence:
MCYPPNVSGWGRGEGNYSTVSSDCPFCPPLPHSTLEGYYVDDALQGQGVYTYEDGGVLQGTYVDGELNGPAQEYDTDGRLIFKGQYKDNIRHGVCWIHYPDGGSLVGEVNEDGEMTGEKIAYVYPDQRTALYGKFIDGEMLEGKLATLMATEEGKPHFELTSGSSVFHFDKSTSSCISSDALLPDPYESERVYVADSLISSAGEGLFSKVAVGPNTVMSFYNGVRITHQEVDSRDWALNGNTLSLDEETVIDVPEPYNHVSKYCASLGHKANHSFTPNCVYDMFVHPRFGPIKCIRTLRAVEAEEELTVAYGYDHSPPGKSGPEAPEWYQVELKAFQATQQK
Protein: 1,2-phenylacetyl-CoA epoxidase, subunit E (EC 1.-.-.-) (1,2-phenylacetyl-CoA epoxidase, reductase subunit) (1,2-phenylacetyl-CoA monooxygenase, subunit E) (P76081)
Organism: Escherichia coli (strain K12)
Function: Component of 1,2-phenylacetyl-CoA epoxidase multicomponent enzyme system which catalyzes the reduction of phenylacetyl-CoA (PA-CoA) to form 1,2-epoxyphenylacetyl-CoA. The subunit E is a reductase with a preference for NADPH and FAD, capable of reducing cytochrome c.
Interaction partners:
- 1,2-epoxyphenylacetyl-CoA isomerase
- 1,2-phenylacetyl-CoA epoxidase, subunit C
- 1,2-phenylacetyl-CoA epoxidase, subunit A
- 1,2-phenylacetyl-CoA epoxidase, subunit B
- Putative 1,2-phenylacetyl-CoA epoxidase, subunit D
- Acyl-coenzyme A thioesterase PaaI
- Phenylacetate-coenzyme A ligase
- Bifunctional protein PaaZ
- 2,3-dehydroadipyl-CoA hydratase
- 3-hydroxyadipyl-CoA dehydrogenase
Sequence:
MTTFHSLTVAKVESETRDAVTITFAVPQPLQEAYRFRPGQHLTLKASFDGEELRRCYSICRSYLPGEISVAVKAIEGGRFSRYAREHIRQGMTLEVMVPQGHFGYQPQAERQGRYLAIAAGSGITPMLAIIATTLQTEPESQFTLIYGNRTSQSMMFRQALADLKDKYPQRLQLLCIFSQETLDSDLLHGRIDGEKLQSLGASLINFRLYDEAFICGPAAMMDDAETALKALGMPDKTIHLERFNTPGTRVKRSVNVQSDGQKVTVRQDGRDREIVLNADDESILDAALRQGADLPYACKGGVCATCKCKVLRGKVAMETNYSLEPDELAAGYVLSCQALPLTSDVVVDFDAKGMA
Protein: Cyclic nucleotide gated channel subunit alpha 3 (Q9ER32)
Organism: Rattus norvegicus (Rat)
Subcellular location: Membrane {ECO:0000256|ARBA:ARBA00004141}; Multi-pass membrane protein {ECO:0000256|ARBA:ARBA00004141}.
Interaction partners:
Sequence:
MAKVNTQCSQPSPRQLSVKDAADRDLDQVENGLGRVSRFIISIRAWAARHLHHEDPTPDSFLDRFHGAELKEVSSQERNAQPNPGGQEPPEGGKGRKKDPIVVDPSSNIYYRWLTAIALPVFYNWCLLVCRACFDELQSEHLTLWLVLDYSADALYVVDMLVRARTGFLEQGLMVRDTKRLWKHYTKTLHFKLDILSLIPTDLAYLKLGMNYPELRFNRLLRFSRLFEFFDRTETRTNYPNVFRIGNLVLYTLIIIHWNACIYFAISKFIGFGTDSWVYPNTSKPEYGRLSRKYIYSLYWSTLTLTTIGETPPPVKDEEYLFVVIDFLVGVLIFATIVGNVGSMISNMNASRAEFQAKIDSIKQYMQFRKVTKDLETRVIRWFDYLWANRKTVDEKEVLKNLPDKLKAEIAINVHLDTLKKVRIFQDCEAGLLVELVLKLRPAVFSPGDYICKKGDIGREMYIIKEGKLAVVADDGVTQFVVLSDGSYFGEISILNIKGSKSGNRRTANIRSIGYSDLFCLSKDDLMETLTEYPDAKRALEEKGRQILMKDNLIDDDLVTARADARNIEEKVEYLESSLDGLQTRFARLLAEYSASQMKLKQRLSQLESQMTRRGHGFSPDRENSEDASKAD
Protein: Trafficking protein particle complex subunit (A0A1D8PU84)
Organism: Candida albicans (strain SC5314 / ATCC MYA-2876) (Yeast)
Subcellular location: Endoplasmic reticulum {ECO:0000256|ARBA:ARBA00004240}. Golgi apparatus, cis-Golgi network {ECO:0000256|PIRNR:PIRNR017479}.
Interaction partners:
- Gsg1p
- Uncharacterized protein
- TRAPP subunit
- Transport protein particle complex II subunit
- Trafficking protein particle complex subunit
- Trafficking protein particle complex subunit BET3
- Trs33p
- Trs120p
- Trafficking protein particle complex subunit
- Trafficking protein particle complex subunit 11 domain-containing protein
Sequence:
MSNDDIILPSVSSLSKLTINDVSKSGFGYNPSIGPISNTITLESSSVLLNKRTISLTPTSSDSIYDRNIITKKPHEINLSSLSFLFCEIISWAHSNSKGIQDLENRLNGLGYQIGQRYLELCKIREGFKNSKREIRLLEMLQFIHGPFWKLIFGKTANELEKSQDLPNEYMIVENVPLLNRFISIPKEYGDLNCSAFVAGIIEGALDNSGFNADVTAHTVATDANPLRTVFLIKFDDSVLIRESLRFG
Protein: Dynein axonemal assembly factor 4 (Q9VKJ5)
Organism: Drosophila melanogaster (Fruit fly)
Subcellular location: Cell projection, neuron projection {ECO:0000256|ARBA:ARBA00004487}. Dynein axonemal particle {ECO:0000256|ARBA:ARBA00024190}. Nucleus {ECO:0000256|ARBA:ARBA00004123}.
Interaction partners:
- Protein kintoun
- AT03545p
- AT12351p
- Cilia- and flagella-associated protein 298
Sequence:
MVQISQTEEDIKISIELNRLVTRKPDVVLLPQYLKFNNPPIFFERHLAQEIDEMASFCRIFKNEARIVLVKKEKGLWPEMFQKLDKEALMQKRLEIADLIVERNKKRDEKALERYDNKRRAEIQKEIQRETDMRERVKQFQENSVREALVVDVRKEAKATPKPDTLQYPPSSGGASRLATPLMRPPMSSVRGSGRINVNFTTQHKRVTPKRESQAAMEKAYAAAGGPNANVQSPMESVDE
Protein: Nucleobindin 1 (Q9VVK7)
Organism: Drosophila melanogaster (Fruit fly)
Interaction partners:
- Uncharacterized protein
- Uncharacterized protein, isoform B
Sequence:
MVQNVALLGLALIAISASIVALPVTQNKKDHKEAAESSTPATADVETALEYERYLREVVEALEADPEFRKKLDKAPEADIRSGKIAQELDYVNHHVRTKLDEIKRREVERLRELANQAYELSNDIDRKHLKVSQHLDHDNEHTFEIEDLRKLIQKTSDDLAEADRKRRGEFKEYEMQKEFEREAQKKEMDEESRKKFETELKEKEEKHKDHEKLHHPGNKAQLEDVWEKQDHMDKNDFDPKTFFSIHDVDSNGYWDEAEVKALFVKELDKVYQSDLPEDDMRERAEEMERMREHYFQETDMNHDGLISIDEFMVQTNKEEFQKDPEWETIDRQQQYTHEEYLEYERRRQEEVQRLIAQGQLPPHPNMPQGYYAAPPPGGVAYQQAPPGAQLHYQHPDQVHAQQQQQYAQQQQQYAQQYQQQQYGNGQQPVQLQPNQVYQHAGQIPQQQQPVYQNQPVYQQQQPVYQQQQPVQQQQKPVQQPVQQQQQPVQQQQQPVQQQQQTVQQQQPVQQQQQTVQQQQPVQQQQQTAQQQPVAQQQIHNQSPPPVLNQQVPVQQQQKQHQESLNQQH
Protein: GH22833p (Q9VSS3)
Organism: Drosophila melanogaster (Fruit fly)
Interaction partners:
Sequence:
MALAAAPTAGPSHGGLALTVSSAGGYDGTNQYEENAEHLRQLFSQSKLVSFSIAHIACSAGSSSGDNYMSVVKRVTISQAGKDQDPELAGSEIVTVIVKRQIASLSRRQLYRCEEAFSNEINAYRHLAPLLAAHSRHQLFPVCHIAESQDRRDAEGGEPIIVLQDLKAMGFRMKDRLAGLELSDCLLVMKKLAQLHAASLAAQELESSSFAFHADHLQEIVYCDEATDFYATILDTSVQQALESLGDANADDCLTTPIRLLEELRTNLFENLKHEINATAAAPNSVICHGDLWVNNIMFRSEPEEVIFFDLQAMRKSSPIFDILHFIYTSTRRPLRDVHTDTLLAAYSQALSEELRHQLEDTTAAERLEELCEAFSLQRLSSDYVRQVHYGLAIGMWILPAVTFDPNNLPNLDVMSEQNLTGKEIKCTQMLTSEYHMRIRELVMEFYELGYLQMQKETL
Protein: Chromator, isoform A (Chromator, isoform B) (Chromator, isoform C) (Chromator, isoform D) (Chromator, isoform E) (MIP27283p1) (Q86BS3)
Organism: Drosophila melanogaster (Fruit fly)
Subcellular location: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
Interaction partners:
- LD15904p
- Centrosome-associated zinc finger protein Cp190
- Chromosomal serine/threonine-protein kinase JIL-1
- Boundary element associated factor
- Nucleoprotein TPR
- Protein MBD-R2
- Protein will die slowly
- CTCF
- Zinc finger protein su
- Histone H1
Sequence:
MLAQEISPTEIGKHANIIRAAQEELANMDVLVCGRCLRAYNFVEEFQAHKEDACEKENANLKESLDPKPTIWAFTLWKATQLHSRKDASGSSWALYQHWVKLDDSVREPWIVAGKTIQSFGKIAHGQLQDMPVRITKTVVNPNNNNTSNSNNNNTSVSPTRKSPTGKLPTLANQLKDTENERPKSKPSTPTPSSVPSAGAVKPNNRIAIRIDSKTDQRTEEPVEKIVAKRFNPRRKTHEYLVKWVDRSHHENTWEVMANLERVPYFLQMFEKQLARQKLTREKGLDALKRMQSSGTNAKSDTAAPHSPLPASSQVSPSSRPSRTSKTKAMDAFKQWVNETVAGDGSSSPSSANEDESSTEQEWPPSSGAIKRKLNNTDSSLEGSGLNDSMDLEDLEEDLPSHTVKRLKNGGSSVQLNKPRIQSTEKQQTKINGNSTVVSPLTEQKMGEIIYTEDSTSSGMFRKPEMPNTINLKKEKPECPVRYLSRSEVGSSTRGVFRVENSEAPAPVSPAPVPQKVIAAPPAAGIAKRLPMARPAHSGANSPITVGQRQHALRTPGHGPVTAALHRRPGVGGASHVRQNLQQAPGRAHPGGRVLARAGVGTPQHRQQVQTPQGAKAVTPEQKILQLSKSGDLKVTRKVVTREELLAQRSAQARQRQALSQQQSSQQQKATPARQRIVSKSTIQPTPLQMELEEEIHQHQAQLCPITGKLIGQEETQLQMEQEQQQEQQREQLEAAAQALLGSDQQVLTNEDGSALLVRGEDGTVYQVAGKNAEGQTILVTQGPDGEQQFAYVAAAEGEDQDVLSLDHAVAEAVQAGEQVESHGVGAATADGEQILVSMTEEELAQHQVLQQAEASAAGTGTPPTAQIHITTSDSDGTESQIPAEVVQADLPSPGGTRRVVLLLQDGTFMMTEMHEDQFKTLNIPT
Protein: Alpha-barbatene synthase (AtBS) (EC 4.2.3.69) (Beta-chamigrene synthase) (EC 4.2.3.78) (Terpeneoid synthase 11) (AtTPS11) (Thujopsene synthase) (EC 4.2.3.79) (Q4KSH9)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Involved in the biosynthesis of over 15 sesquiterpenes (C15). The major products are (+)-alpha-barbatene (27.3%), (+)-thujopsene (17.8%) and (+)-beta-chamigrene (9.9%). Can use farnesyl diphosphate or geranyl diphosphate as substrates, but not geranylgeranyl diphosphate.
Subcellular location: Cytoplasm {ECO:0000305}.
Interaction partners:
- Inactive squalene synthase 2
- Squalene synthase 1
- Alpha-humulene/
- (Z)-gamma-bisabolene synthase 1 (Terpenoid synthase 12) (AtTPS12)
- (Z)-gamma-bisabolene synthase 2 (Terpenoid synthase 13) (AtTPS13)
- Farnesyl pyrophosphate synthase 2
- Farnesyl pyrophosphate synthase 1, mitochondrial
- B3 domain-containing protein At3g06220
- Heterodimeric geranylgeranyl pyrophosphate synthase large subunit 2
- Dehydrodolichyl diphosphate synthase 1
Sequence:
MEALGNFDYESYTNFTKLPSSQWGDQFLKFSIADSDFDVLEREIEVLKPKVRENIFVSSSTDKDAMKKTILSIHFLDSLGLSYHFEKEIEESLKHAFEKIEDLIADENKLHTISTIFRVFRTYGYYMSSDVFKIFKGDDGKFKESLIEDVKGMLSFYEAVHFGTTTDHILDEALSFTLNHLESLATGRRASPPHISKLIQNALHIPQHRNIQALVAREYISFYEHEEDHDETLLKLAKLNFKFLQLHYFQELKTITMWWTKLDHTSNLPPNFRERTVETWFAALMMYFEPQFSLGRIMSAKLYLVITFLDDACDTYGSISEVESLADCLERWDPDYMENLQGHMKTAFKFVMYLFKEYEEILRSQGRSFVLEKMIEEFKIIARKNLELVKWARGGHVPSFDEYIESGGAEIGTYATIACSIMGLGEIGKKEAFEWLISRPKLVRILGAKTRLMDDIADFEEDMEKGYTANALNYYMNEHGVTKEEASRELEKMNGDMNKIVNEECLKITTMPRRILMQSVNYARSLDVLYTADDVYNHREGKLKEYMRLLLVDPILL
Protein: Asparaginyl endopeptidase Rep2 (EC 3.4.22.-) (Vacuolar-processing enzyme 3) (OsVPE3) (Q8GS39)
Organism: Oryza sativa subsp. japonica (Rice)
Function: Asparaginyl endopeptidase that may act as an activator of REP1.
Interaction partners:
- Os02g0219400 protein
Sequence:
MAARWCFALLLALSAAAAGAGAKRTWEPVIRMPGEVVEEEVATVPRGSEGTEEEEKDGVGTRWAVLVAGSSGYGNYRHQADVCHAYQILRKGGLKEENIVVFMYDDIANNILNPRPGVIVNHPQGEDVYAGVPKDYTGDEVTAKNFYAVLLGNKTAVTGGSRKVIDSKPNDHIFIFYSDHGGPGVLGMPNLPYLYAADFMKVLQEKHASNTYAKMVIYVEACESGSIFEGLMPEDLNIYVTTASNAEESSWGTYCPGMEPSPPSEYITCLGDLYSVSWMEDSETHNLKEESIKKQYEVVKKRTSDMNSYGAGSHVMEYGDRTFKDDKLYLYQGFDPANAEVKNKLSWEGPKAAVNQRDADLLFLWRRYELLHDKSEEKLKALREISDTVMHRKLLDSSVDLVGKLLFGFGNGPSVLQAVRPSGQPLVDDWDCLKRMVRIFESHCGPLTQYGMKHMRAFANICNNGISGASMKEASIATCSSHNSGRWSSLVQGYSA
Protein: COP9 signalosome complex subunit 1 (CSN complex subunit 1) (Q5BD89)
Organism: Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) (Aspergillus nidulans)
Function: Component of the COP9 signalosome (CSN) complex that acts as an regulator of the ubiquitin (Ubl) conjugation pathway by mediating the deneddylation of the cullin subunit of SCF-type E3 ubiquitin-protein ligase complexes (By similarity). The CSN complex seems to link protein degradation to sexual development. Required for fruit body formation.
Subcellular location: Cytoplasm {ECO:0000250}. Nucleus {ECO:0000250}.
Interaction partners:
- COP9 signalosome complex subunit 2
- COP9 signalosome complex subunit 3
- COP9 signalosome complex subunit 7
- COP9 signalosome complex subunit 6
- COP9 signalosome complex subunit 5
- COP9 signalosome complex subunit 4
- Ubiquitin-like domain-containing protein
- Uncharacterized protein
- COP9 signalosome complex subunit 8
- RING-box protein 1
Sequence:
MEPMLPEAGEAALLSSYAPQASGSMGVDPDPITGLVSTSAAPLVRVEEAPKFELESYIANYTGRTRFNRLYLIGTCSSYLAVDALKAAIAEAKSGKDVARYLRAVQALADVAPNEPEATIDSDWVERSQKVVKAETDRLEHELRGYKNNLIKESIRMGNEELGQHYHRIGDLTSAFKAYSRMRDFCTTPSHIASMLFKIINVAIERGDWLNVQSNVHRLRSQGGKPEEQAKHQPKISAAMGLSQLHSGSYLEAANSFIATDPSLGDTFNEVLTSNDVAVYGGLCALASMDRNELQRRVLDNSSFRNFLELEPHIRRAISFFCNSKFRPCLEILEAYRADYLLDIHLQRHVQVLYNRIRTKSIQQYLIPFNRVSLESMAKIFVLGNPTSQSSQSDSKSAFVQELISLIQDGTLDARIDLEKHVLVSTQGDKRIEVQEAVLDSLDNYVREAHLRLLRSNIIRAGLEVRPLGEDRRTKLEERGKKGHSAIGNLLRATGMKQ
Protein: MOB kinase activator 1A (MOB1, Mps One Binder kinase activator-like 1B (Yeast)) (Q7ZV70)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Interaction partners:
Sequence:
MSFLFGNRSSKTFKPKKNIPEGSHQYELLKHAEATLGSGNLRAAVMLPEGEDLNGWIAVNTVDFFNQINMLYGTITEFCTEVKCSVMSAGPRYEYHWADGTNIKKPIKCSAPKYIDYLMTWVQDQLDDETLFPSKIGVPFPKNFMSVAKTILKRLFRVYAHIYHQHFDAVIQLQEEAHLNTSFKHFIFFVQEFNLIDRRELAPLQDLIEKLGSKDR
Protein: Midline fasciclin, isoform C (Midline fasciclin, isoform I) (Midline fasciclin, isoform K) (Q9VGF0)
Organism: Drosophila melanogaster (Fruit fly)
Interaction partners:
Sequence:
MLRLWACLLLLGSIQIQAVPFYGDFMPHLTHPLPAHRNLFAPLPFAPLAPLEPQDPLHAQASQRMASVWNGPAPLAPQLHSSHLLPLFSSGYDTEFVPLEHQQQPQGRQETAATVPAQTPSGVEQKPFNVDTITTDVNSPNPAIFFQQSFPFFGNEFFNSFGGFGFGAAQEPWWKGPNVCTEKEEDETVASETEAEETVDTFGQERDGVTNVVRSPLFGQFQFSVNSCAEKPNKHVCTKIVNQNGKKKTLTLTRQCCYGYGRPRNADFTTPCEKIDIKDVEATASDMGAKQFLESARTAGELADMLGAGSGKKVTLFVPNDAAFMEYRGHHQQENNVEDAKAEASKPSIYKLHAVLGEVQLEDVPNEKLLQTELPDQKIRINSYQLPAALGLEPYRFAANCVPIEKHDKLSEQALVHTLGGVLKPLTKNLMDIIRERADMSIMRTVLEKTNLSAMLEDDKPVTIFVPTDAAFDKLEPHLRRALKEGRGCASNILKNHLLDLTFCSLATVPGAKTTAYNLLGEPLLLNRTHRAANQTGPTPIYINNLAKIIDADIMGTNGVLHVIDTILPTESALPMTSLMSQKNLTIFQRLLEASGYDDQFDDLDNVTIFAPTDKALQNTEWARMLKEQPELLNHNLDLLEFLNYHVVKPMIKTCDLSEKSLPTVAGSSVRLNLYSTHALFSDVMNRATVNCARLVHFDDESCGSVLHQVDRALAPPKNNMLKLLEANPNYSKFLELVRKANLTQLLSNDSRSLTLLVPKNDIFEELNESGEGSKPADPMALVKTHIVEDVVCCAGIIPTNWPFVRSIESISGQHLRITRDRRPKIENAGVTKCDVVATNGILHEINDIIVPRPQRQQQQRPQLIPPGAGYQPQGDFDVFF
Protein: CMRF35-like molecule 2 (CLM-2) (CD300 antigen-like family member E) (CMRF35-A5) (Immune receptor expressed on myeloid cells 2) (IREM-2) (Polymeric immunoglobulin receptor 2) (PIgR-2) (PIgR2) (Poly-Ig receptor 2) (CD antigen CD300e) (Q496F6)
Organism: Homo sapiens (Human)
Function: Probably acts as an activating receptor.
Subcellular location: Cell membrane; Single-pass type I membrane protein.
Interaction partners:
- TYRO protein tyrosine kinase-binding protein
- High affinity immunoglobulin epsilon receptor subunit gamma
- Trem-like transcript 4 protein
- CMRF35-like molecule 7
Sequence:
MWLLPALLLLCLSGCLSLKGPGSVTGTAGDSLTVWCQYESMYKGYNKYWCRGQYDTSCESIVETKGEEKVERNGRVSIRDHPEALAFTVTMQNLNEDDAGSYWCKIQTVWVLDSWSRDPSDLVRVYVSPAITTPRRTTHPATPPIFLVVNPGRNLSTGEVLTQNSGFRLSSPHFLLVVLLKLPLLLSMLGAVFWVNRPQWAPPGR
Protein: Intercellular adhesion molecule 1 (ICAM-1) (CD antigen CD54) (Q00238)
Organism: Rattus norvegicus (Rat)
Function: ICAM proteins are ligands for the leukocyte adhesion protein LFA-1 (integrin alpha-L/beta-2). During leukocyte trans-endothelial migration, ICAM1 engagement promotes the assembly of endothelial apical cups through ARHGEF26/SGEF and RHOG activation (By similarity).
Subcellular location: Membrane; Single-pass type I membrane protein.
Interaction partners:
- Integrin subunit alpha L
- Integrin beta
- Integrin alpha-D
- Ezrin
- CD44 antigen
- Vascular cell adhesion protein 1
- Moesin
- Intercellular adhesion molecule 2
- T-lymphocyte activation antigen CD80
- Integrin beta-1
Sequence:
MASTRARPMLPLLLVLVAVVIPGPVGAQVSIHPTEAFLPRGGSVQVNCSSSCEDENLGLGLETNWMKDELSSGHNWKLFKLSDIGEDSRPLCFENCGTTQSSASATITVYSFPERVELDPLPAWQQVGKNLILRCLVEGGAPRTQLSVVLLRGNETLSRQAVDGDPKEITFTVLASRGDHGANFSCFTELDLRPQGLSLFKNVSEVRQLRTFDLPTRVLKLDTPDLLEVGTQQKFLCSLEGLFPASEAQIYLEMGGQMLTLESTNSRDFVSATASVEVTEKLDRTLQLRCVLELADQTLEMEKTLRIYNFSAPILTLSQPEVSEGDQVTVKCEAHGGAQVVLLNSTSPRPPTSQGTSPRPPTSQIQFTLNASPEDHKRRFFCSAALEVDGKSLFKNQTLELHVLYGPHLDKKDCLGNWTWQEGSQQTLTCQPQGNPAPNLTCSRKADGVPLPIGMVKSVKREMNGTYKCRAFSSRGSITRDVHLTVLYHDQNTWVIIVGVLVLIIAGFVIVASIYTYYRQRKIRIYKLQKAQEEALKLKVQAPPP
Protein: NAD(P)H quinone oxidoreductase PST2 (EC 1.6.5.2) (Flavodoxin-like protein PST2) (FLP PST2) (Q59Y37)
Organism: Candida albicans (strain SC5314 / ATCC MYA-2876) (Yeast)
Subcellular location: Cell membrane {ECO:0000269|PubMed:26325183}; Peripheral membrane protein {ECO:0000269|PubMed:26325183}.
Interaction partners:
- NAD
Sequence:
MSKPRVAIIIYSLYHHVYTLAESAKIGIEAAGVKPDLFQVPETLTPEILKLVKAPPKPDIPIAEPKILNNYDAFLFGIPTRFGNMPAQWKGFWDGTGGQWARGDLRGKYAGVFVSTGTPGGGQETTVINTLSTLAHHGIVYVPFGYGSPRLADLNEVHGGSPWGAGTFAGADGSREVTELEKSIAQQQGEDFIKTITQFKQ
Protein: Distal-less homeobox 1 (F8VXJ2)
Organism: Homo sapiens (Human)
Subcellular location: Nucleus {ECO:0000256|PROSITE-ProRule:PRU00108, ECO:0000256|RuleBase:RU000682}.
Interaction partners:
Sequence:
MTMTTMPESLNSPVSGKAVFMEFGPPNQQMSPSPMSHGHYSMHCLHSAGHSQPDGAYSSASSFSRPLGYPYVNSVSSHASSPYISSVQSYPGSASLAQSRLEDPGADSEKSTVVEGGEVRFNGKGKKIRKPRTIYSSLQLQALNRRFQQTQYLALPERAELAASLGLTQTQVKIWFQNKRSKFKKLM
Protein: Signal transducer and activator of transcription (Q9DG74)
Organism: Oncorhynchus mykiss (Rainbow trout) (Salmo gairdneri)
Subcellular location: Cytoplasm {ECO:0000256|ARBA:ARBA00004496, ECO:0000256|RuleBase:RU046415}. Nucleus {ECO:0000256|ARBA:ARBA00004123, ECO:0000256|RuleBase:RU046415}.
Interaction partners:
Sequence:
MAVWIQAQQLQGDALHQMQSLYGQHFPIEVRHYLSQWLEGQLWDVIDLENPQEEFKAKRLLDSLIQELQNKAEHQVGEDGFLLKIKLGHYASQLKSTYDRCPLELVRCIKHILYTEQRLVREASNSSSPVGGMMDSMSQKYQQINQAFEELRLLTQDTENDLRKLQHNQEYFIIQYQESLRIQAQLTSLTTLPPADRQLREPTLLSKRATVEAWLTREANTLQKYRLDLAEKHQKSLQLLRKQQTIILDDELIHWKRRQQLAGNGGPPEGGLDILQSWCEKLAETIWQNRQQIRRAEHLRQQLPIPGPIEELLNDLNSTITDIISALVTSTFIIEKQPPQVLKTQTKFAATVRLLVGGKLNVHMNPPQVKATIISEQQAKALLKNENTRNDSSGEILNNNCVMEYHQATGTLSANFRNMSLKRIKRSDRRGAESVTEEKFTILFESQFSVGGNELVFQVKTLSLPVVVIVHGSQDNNATATVLWDNAFAEPGRVPFIVPDKVLWPQLCEALNMKYKAEVQSNRGLSEENLVFLAQKAFSSSSINPDDYRGMTMTWSQFNRESLPGRNFTFWQWFDGVMELTKKHLKPHWNDGAILGFVNKQQAQDMLMSKPNGTFLLRFSDSEIGGITIAWVAENPNKPGERMVWNLMPYTTKDFSIRSLADRISDLNHLLFLYPDRPKDEVFSKYYTPPLSKAVDGYVKPQIKQVVPEFTTTNPDPAANPTYMDHGASPVVSHPPNYGIYQPMSDSILDADGDFDLDDTMDVARHVEELLRRPMENQWSGQQS
Protein: TOP1 protein (Q17QA9)
Organism: Bos taurus (Bovine)
Interaction partners:
Sequence:
MSGDHLHNDSQIEADFRLNDSHKHKDKHKDREHRHKEHKKDKEKDREKSKHSNSEHKDSEKKHKEKEKTKHKDGSSEKHKDKHKDRDKEKRKEEKIKASGDAKIKKEKENGFSSPPRIKDEPEDDGYFAPPKEDIKPLKRPRDEDDADYKPKKIKTEDIKKEKKRKLEEEEDGKLKKPKNKDKDKDKKVPEPDSKKKKK
Protein: Fog2b (Zinc finger protein ZFPM2b) (Q2QKJ8)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Subcellular location: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
Interaction partners:
Sequence:
MSRRKQSNPKQFKRVFENGLEADSEETMCEKKEILKEEDQSVEDDPIYFSDPENGISKDGDHSRNGEMGGSVKVEQQDSDGQEERVQSSPVTAEEWDGPRELKIVCEGEERKICSCQALLLGTTWGPFPGKIEATTGGSDKVSLVLNGGPRWLMDIMWVSAEDGKSNCAVYSKGGHVWCSTTKNIMEGDELAACVVDLHSHLQTPGPNPYGQGMYPSRQLDAIQLLPQQAAMASILPGAIINKDIFPCKACGIWFRSERNLQAHLMYYCSGRQRDPEMVAEKNANISHQMLRNCTYPQCNMSFAGSHALEMHLSTHNCLKSDEVSTGSNLKCTICDYSAETLMVLQHHILSHLSQTGLRCGQCHFSFQTPREMAKHQELHGHNCTVTNKPIKEDKTDNAPNSITSNSQQVRAKTNINDLQESTAQCDVTQISDLQNTDSSQKSNKGEANSGNKANLSYSRVKSEPSSPRLASSPIQHHLPPAFPLPPFIPHVPFSQDITMGPQASEILAKMSELVHRRLRHGGNSYPPVMYSALVPKGATCFECNITFNNLDNYLVHKKHYCSSRWENTHKSHDFSGLLDKPAGTVSPKIGASLAVMLNAGHPSEVKGQEPKSCNPIAGGKVTDELTVQVKKASTPSGAQERPNGTQLDLQSQKMPLTETDPSHTTCEACKITFSRHETYMVHKQYYCATRHDPQIKRANNKGPANQKAVRPRKRRKAYELANSEQEQMPPMGMPSFLGMPTLGGPYMSKDTLDSFRDHQRYNMIQGLVPKYPEASLTVMKSALVSKCNIISKEESDAPIDLSKKCVPQFGNTPVSPKGLMDYHECVVCKISFNKVEDYLKHKQNFCPGTILQSASTENKSIKKEVPRNTNNLLENPLFEFPAPRIKTENPNAVPTSDTQASSEEQLIPTKDDLRNMFQTSSTYPSPAKKMRPDEQIWPYYEIKPTDYATGMLVSQSERRQSPNEGSEGEKDQPMPDGSHLSTDDPENQSQSSSLKDNVEIEEKMEDAENKHESPTPESRLDDPINSKDVTTQMPSIKTEEVSTSLKKALAGSIANSSNVKYCRPCDIQFNNLSNFITHKKFYCSSHTAEHVK
Protein: E3 ubiquitin-protein ligase (EC 2.3.2.26) (F1M3F2)
Organism: Rattus norvegicus (Rat)
Interaction partners:
- Mothers against decapentaplegic homolog 2
- Mothers against decapentaplegic homolog 7
- Mothers against decapentaplegic homolog
- TGF-beta receptor type-1
- Mothers against decapentaplegic homolog 3
- E3 ubiquitin-protein ligase
- TGF-beta receptor type-2
- NEDD4-like E3 ubiquitin protein ligase.
- E3 ubiquitin-protein ligase NEDD4
- TNF receptor-associated factor 6
Sequence:
MSNPGGRRNGPVKLRLTVLCAKNLVKKDFFRLPDPFAKVVVDGSGQCHSTDTVKNTLDPKWNQHYDLYIGKSDSVTISVWNHKKIHKKQGAGFLGCVRLLSNAINRLKDTGYQRLDLCKLGPNDNDTVRGQIVVSLQSRDRIGTGGQVVDCSRLFDNDLPDGWEERRTASGRIQYLNHITRTTQWERPTRPASEYSSPGRPLSCFVDENTPITGTNGATCGQSSDPRLAERRVRSQRHRNYMSRTHLHTPPDLPEGYEQRTTQQGQVYFLHTQTGVSTWHDPRVPRDLSNINCEELGPLPPGWEIRNTATGRVYFVDHNNRTTQFTDPRLSANLHLVLNRQNQLKDQQQQQVVSLCPDDTECLTVPRYKRDLVQKLKILRQELSQQQPQAGHCRIEVSREEIFEESYRQVMKMRPKDLWKRLMIKFRGEEGLDYGGVAREWLYLLSHEMLNPYYGLFQYSRDDIYTLQINPDSAVNPEHLSYFHFVGRIMGMAVFHGHYIDGGFTLPFYKQLLGKSITLDDMELVDPDLHNSLVWILENDITGVLDHTFCVEHNAYGEIIQHELKPNGKSIPVTEENKKEYVRLYVNWRFLRGIEAQFLALQKGFNEVIPQHLLKTFDEKELELIICGLGKIDVSDWKANTRLKHCTPDSNVVKWFWKAVELFDEERRARLLQFVTGSSRVPLQGFKALQGAAGPRLFTIHQIDACTNNLPKAHTCFNRIDIPPYESYEKLYEKLLTAIEETCGFAVE
Protein: Glutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial (Glu-AdT subunit C) (EC 6.3.5.-) (F4JV80)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in chloroplasts and mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln).
Subcellular location: Mitochondrion {ECO:0000255|HAMAP-Rule:MF_03149, ECO:0000269|PubMed:18441100, ECO:0000305|PubMed:25862457}. Plastid, chloroplast {ECO:0000255|HAMAP-Rule:MF_03149, ECO:0000269|PubMed:18441100}.
Interaction partners:
- Nuclear pore complex protein NUP107
- Glutamyl-tRNA
- Protein SEH1
- Nuclear pore complex protein NUP160
- Nuclear pore complex protein NUP205
- Nuclear pore complex protein NUP54
- Nuclear pore complex protein NUP155
- Nuclear pore complex protein NUP88
- 1-acyl-sn-glycerol-3-phosphate acyltransferase
- Nuclear pore complex protein NUP93B
Sequence:
MATRALLAVIYASPNRCYISPSRIKIQSLTCSSSSHYYQRQSRKNHRIARSYSSDSDSSVLQPPDVARLAQTARISLTPAEIEECETKIRRVIDWFGQLQQVDVNSVEPAIRAEMDGGNLREDAPETFDNRDSIRASIPSFEDAYLKVPKILNKE
Protein: Large ribosomal subunit protein cL37 (50S ribosomal protein 5, chloroplastic) (Plastid-specific 50S ribosomal protein 5) (PSRP-5) (Q9LER7)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Subcellular location: Plastid, chloroplast.
Interaction partners:
- Large ribosomal subunit protein cL38
- Large ribosomal subunit protein uL24c
- Small ribosomal subunit protein bTHXc
- Large ribosomal subunit protein uL6c
- Large ribosomal subunit protein uL3c
- Large ribosomal subunit protein bL21c
- Large ribosomal subunit protein bL17c
- Large ribosomal subunit protein uL5c
- Large ribosomal subunit protein uL4c
- Large ribosomal subunit protein uL29c
Sequence:
MALLCFNSLPSLSSLSSSSSSRLLQSPSFASPVLSLKPNAVESKNRVSLSAYSLNSSHGRIVVKAAASGVDGAEPESKEEPKTVVAAVPVDKLPLESKEAKEKLLLELRLKMKLAKKIRLRRKRLVRKRKMRKKGRWPPSKMKKNKNV
Protein: D-allose kinase (Allokinase) (EC 2.7.1.55) (P32718)
Organism: Escherichia coli (strain K12)
Function: Catalyzes the phosphorylation of D-allose to D-allose 6-phosphate. Has also low level glucokinase activity in vitro.
Interaction partners:
- D-allulose-6-phosphate 3-epimerase
- D-allose transport system permease protein AlsC
- D-allose import ATP-binding protein AlsA
- Ribose-5-phosphate isomerase B
- D-allose-binding periplasmic protein
- N-acetylmannosamine kinase
- HTH-type transcriptional regulator RpiR
- Inner membrane protein YjeO
- Linear primary-alkylsulfatase
- DNA-binding transcriptional repressor Mlc
Sequence:
MQKQHNVVAGVDMGATHIRFCLRTAEGETLHCEKKRTAEVIAPGLVSGIGEMIDEQLRRFNARCHGLVMGFPALVSKDKRTIISTPNLPLTAADLYDLADKLENTLNCPVEFSRDVNLQLSWDVVENRLTQQLVLAAYLGTGMGFAVWMNGAPWTGAHGVAGELGHIPLGDMTQHCACGNPGCLETNCSGMALRRWYEQQPRNYPLRDLFVHAENAPFVQSLLENAARAIATSINLFDPDAVILGGGVMDMPAFPRETLVAMTQKYLRRPLPHQVVRFIAASSSDFNGAQGAAILAHQRFLPQFCAKAP