wanglab/gogpt-training-data huggingface dataset:
Protein: Vacuolar protein sorting-associated protein VTA1 homolog (SKD1-binding protein 1) (SBP1) (Q9CR26)
Organism: Mus musculus (Mouse)
Function: Involved in the endosomal multivesicular bodies (MVB) pathway. MVBs contain intraluminal vesicles (ILVs) that are generated by invagination and scission from the limiting membrane of the endosome and mostly are delivered to lysosomes enabling degradation of membrane proteins, such as stimulated growth factor receptors, lysosomal enzymes and lipids. Thought to be a cofactor of VPS4A/B, which catalyzes disassembles membrane-associated ESCRT-III assemblies (By similarity). Involved in the sorting and down-regulation of EGFR.
Subcellular location: Cytoplasm {ECO:0000269|PubMed:15173323}. Endosome membrane {ECO:0000269|PubMed:15173323}; Peripheral membrane protein {ECO:0000269|PubMed:15173323}.
Interaction partners:
- Charged multivesicular body protein 5
- Vacuolar protein sorting-associated protein 4B
- Vacuolar protein sorting-associated protein 4A
- Charged multivesicular body protein 1a
- Charged multivesicular body protein 1B1
- IST1 homolog
- Charged multivesicular body protein 1B2
- Pre-mRNA-splicing factor SPF27
- GTP cyclohydrolase 1
- Charged multivesicular body protein 3
Sequence:
MAALAPLPPLPAQFKSIQHHLRTAQEHDKRDPVVAYYCRLYAMQTGMKIDSKTPECRKFLSKLMDQLEALKKQLGDNEAVTQEIVGCAHLENYALKMFLYADNEDRAGRFHKNMIKSFYTASLLIDVITVFGELTDENVKHRKYARWKATYIHNCLKNGETPQAGPVGIEEENDVEENEDVGATSLPTQPPQPSSSSAYDPSNLAPGSYSGIQIPPGAHAPANTPAEVPHSTGVTSNAVQPSPQTVPAAPAVDPDLYTASQGDIRLTPEDFARAQKYCKYAGSALQYEDVGTAVQNLQKALRLLTTGRE
Protein: Petal death protein (EC 3.7.1.1) ((R)-2-methylmalate lyase) (D-citramalate lyase) (EC 4.1.3.-) (Oxalacetic hydrolase) (PSR132) (Q05957)
Organism: Dianthus caryophyllus (Carnation) (Clove pink)
Function: Catalyzes cleavage of the C(2)-C(3) bond in oxaloacetate and in (2R)-alkyl malate derivatives to form oxalate and acetate, and alkyl carboxylates and R-ketocarboxylates, respectively.
Interaction partners:
Sequence:
MAPPNGTTNGETEVATQGSYTAVSTGRKTTMHRLIEEHGSVLMPGVQDALSAAVVEKTGFHAAFVSGYSVSAAMLGLPDFGLLTTTEVVEATRRITAAAPNLCVVVDGDTGGGGPLNVQRFIRELISAGAKGVFLEDQVWPKKCGHMRGKAVVPAEEHALKIAAAREAIGDSDFFLVARTDARAPHGLEEGIRRANLYKEAGADATFVEAPANVDELKEVSAKTKGLRIANMIEGGKTPLHTPEEFKEMGFHLIAHSLTAVYATARALVNIMKILKEKGTTRDDLDQMATFSEFNELISLESWYEMESKFKNFTPKAT
Protein: Probable transcriptional regulator (Q9I483)
Organism: Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Subcellular location: Cytoplasm {ECO:0000256|ARBA:ARBA00004496}.
Interaction partners:
- Probable transcriptional regulator
- Probable transcriptional regulator
- histidine kinase
- Probable transcriptional regulator
- Probable two-component response regulator
- Probable transcriptional regulator
Sequence:
MPGVVFFVKDERARYVLVNRTLARRCGVKDKAELLGRSADEVFPSSLGPLYAEQDRRVLRGGATLENQLELHLYPGRQPGWCLTHKQALRDADGAIIGMAGISHDLPAAQSAHPAYGRLAAVDAHIREHYDQPLSLADLTAIAGLSVAQLERHCKRIFQLTPRQMIHKARLGAASQLLAGDAPITEIALRCGYTDHSAFSRQFKALTGLSPSQYRETHRQPRKA
Protein: Serine/threonine-protein kinase crk1 (EC 2.7.11.23) (Mitotic catastrophe suppressor 6) (Q12126)
Organism: Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Function: Protein kinase essential for cell proliferation, where it is required for completion of cytokinesis. Phosphorylates the C-terminal repeat domain (CTD) of RNA polymerase II.
Subcellular location: Cytoplasm {ECO:0000269|PubMed:16823372}. Nucleus {ECO:0000269|PubMed:16823372}.
Interaction partners:
- RNA polymerase II transcription factor B subunit 3
- Cyclin mcs2
- DNA-directed RNA polymerase II subunit rpb1
- General transcription and DNA repair factor IIH subunit tfb4
- General transcription and DNA repair factor IIH helicase subunit XPD
- Transcription initiation factor IIE subunit alpha
- Transcription initiation factor IIE subunit beta
- General transcription and DNA repair factor IIH helicase/translocase subunit XPB
- General transcription and DNA repair factor IIH subunit tfb1
- General transcription and DNA repair factor IIH subunit tfb2
Sequence:
MDIEKSDKWTYVKERKVGEGTYAVVFLGRQKETNRRVAIKKIKVGQFKDGIDISALREIKFLRESRHDNVIELVDVFSTKSNLNIILEFLDSDLEMLIKDKFIVFQPAHIKSWMVMLLRGLHHIHSRFILHRDLKPNNLLISSDGVLKLADFGLSRDFGTPSHMSHQVITRWYRPPELFMGCRSYGTGVDMWSVGCIFAELMLRTPYLPGESDLDQLNVIFRALGTPEPEVIKSMQQLPNYVEMKHIPPPNGGMEALFSAAGHEEIDLLKMMLDYNPYRRPTAQQALEHHYFSALPKPTHPSLLPRKGGEEGIKHVSSDLQRQNNFPMRANIKFV
Protein: Phosphoglycerate mutase 2 (PGAM 2) (EC 5.4.2.11) (BPG-dependent PGAM 2) (MPGM 2) (Phosphoglyceromutase 2) (Q12008)
Organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Function: Could be non-functional.
Subcellular location: Cytoplasm {ECO:0000269|PubMed:11502169, ECO:0000269|PubMed:24146988}.
Interaction partners:
- Phosphoglycerate mutase 1
- Phosphoglycerate mutase 3
- Phosphoglycerate kinase
- Enolase 1
- Enolase 2
- Enolase-related protein 3
- Enolase-related protein 1
- Broad-specificity phosphatase YOR283W
- Glucose-6-phosphate isomerase
- Fructose-bisphosphate aldolase
Sequence:
MTASTPSNVMTLFLLRHGQSELNHENIFCGWIDAKLTEKGKEQARHSAELIEQYCKANNLRLPQIGYTSRLIRTQQTIETMCEEFKLKPQLQVVYDFNKIKLGDEFGSDDKDNMKIPILQTWRLNERHYGSWQGQRKPNVLKEYGKDKYMFIRRDYEGKPPPVDLDREMIQQENEKGSSTGYEFKEPNRQIKYELECSNHDIVLPDSESLREVVYRLNPFLQNVILKLANQYDESSCLIVGHGSSVRSLLKILEGISDDDIKNVDIPNGIPLVVELDKNNGLKFIRKFYLDPESAKINAEKVRNEGFIKNP
Protein: Probable poly(ADP-ribose) glycohydrolase 2 (EC 3.2.1.143) (Q8VYA1)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Poly(ADP-ribose) synthesized after DNA damage is only present transiently and is rapidly degraded by poly(ADP-ribose) glycohydrolase.
Interaction partners:
- Poly [ADP-ribose] polymerase 2
- Poly [ADP-ribose] polymerase 1
- Protein ADP-ribosyltransferase PARP3
- Polynucleotide 3'-phosphatase ZDP
- Putative F-box protein At5g15660
- At4g12890 reductase family protein)
- Ubiquitin-conjugating enzyme E2 36
- SAP domain-containing protein
- Proliferating cellular nuclear antigen 1
- Proliferating cell nuclear antigen 2
Sequence:
MELRADLRSILQYLPLVAQSSSLVWPPSVEEELQTISRGPSESMVNSGEALALHITNMRKSLSLNASDLAPYALQGYGLFFDKKISREESANFFGEVVPALCRLLLQLPSMLEKHYQKADHVLDGVKSGLRLLGPQEAGIVLLSQELIAALLACSFFCLFPEVDRSLKNLQGINFSGLFSFPYMRHCTKQENKIKCLIHYFGRICRWMPTGFVSFERKILPLEYHPHFVSYPKADSWANSVTPLCSIEIHTSGAIEDQPCEALEVDFADEYFGGLTLSYDTLQEEIRFVINPELIAGMIFLPRMDANEAIEIVGVERFSGYTGYGPSFQYAGDYTDNKDLDIFRRRKTRVIAIDAMPDPGMGQYKLDALIREVNKAFSGYMHQCKYNIDVKHDPEASSSHVPLTSDSASQVIESSHRWCIDHEEKKIGVATGNWGCGVFGGDPELKIMLQWLAISQSGRPFMSYYTFGLQALQNLNQVIEMVALQEMTVGDLWKKLVEYSSERLSRRTWLGFFSWLMTSLST
Protein: GH16244p (Q9W2R2)
Organism: Drosophila melanogaster (Fruit fly)
Subcellular location: Peroxisome {ECO:0000256|ARBA:ARBA00004275}.
Interaction partners:
- Uncharacterized protein
Sequence:
MSCEVHYDAASRTWFGPRGKDFYGPEMTLGEVIMRVLQINADQVMQICDTTGQELTGAQLAQQSARIAQAFKRLGLRRGDVVGISANNSTYLTSVIIAALLRGIPINPLHPEFTEETVKYMYDITEPKVIFCDVENYHIIKTVNGKLQNPAKIYLVNGKLEGVLDISEMLNDEDSITAAAYVPCPKLHGDHTAFIVCSSGTTGMPKGVTRSHRSLLCNCKNPNTYTRDSVLLSFSPLYWISGTIILLASLLNGCRRIITNRPYSVEYLLQLVARHKVTFLFLASHQIALLSKHDSDVMELKAQLQSIRVLIGAGSKVCKAVCRRMYELIGNQRFVVGYGLSEMGGLSKNVGGPVGCEGKVMRNVELRVLDKLKMPLGINEVGIIYARLRFKWAGYYRNPEATRRALSSDGMWFRTGDIGYLDSEGYLYIQTRDTDVFKFNNFQIYPEQIEEFILRLPGVSEACVFGIPDAVSTNLTACAVVRTKSPEGERLTADHIRNIVEHHLSGAYHIRGGVYFIDSLPKTPNDKLQRRKVLGLVQQLELKAE
Protein: Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial (EC 1.3.5.1) (D6RFM5)
Organism: Homo sapiens (Human)
Subcellular location: Mitochondrion inner membrane {ECO:0000256|ARBA:ARBA00004443, ECO:0000256|RuleBase:RU362051}; Peripheral membrane protein {ECO:0000256|ARBA:ARBA00004443, ECO:0000256|RuleBase:RU362051}; Matrix side {ECO:0000256|ARBA:ARBA00004443, ECO:0000256|RuleBase:RU362051}.
Interaction partners:
Sequence:
MSGVRGLSRLLSARRLALAKAWPTVLQTGTRGFHFTVDGNKRASAKVSDSISAQYPVVDHEFDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTRSHTVAAQGGINAALGNMEEDNWRWHFYDTVKGSDWLGDQDAIHYMTEQAPAAVVELENYGMPFSRTEDGKIYQRAFGGQSLKFGKGGQAHRCCCVADRTGHSLLHTLYGRSLRYDTSYFVEYFALDLLMENGECRGVIALCIEDGSIHRIRAKNTVVATGGYGRTYFSCTSAHTSTGDGTAMITRAGLPCQDLEFVQFHPTGIYGAGCLITEGCRGEGGILINSQGERFMERYAPVAKDLASRDVVSRSMTLEIREGRGCGPEKDHVYLQLHHLPPEQLATRLPGISETAMIFAGVDVTKEPIPVLPTVHYNMGGIPTNYKGQVLRHVNGQDQIVPGLYACGEAACASVHGANRLGANSLLDLVVFGRACALSIEESCRPGDKVPPIKPNAGEESVMNLDKLRFADGSIRTSELRLSMQKVRIDEYDYSKPIQGQQKKPFEEHWRKHTLSYVDVGTGKVTLEYRPVIDKTLNEADCATVPPAIRSY
Protein: S-alkyl-thiohydroximate lyase SUR1 (EC 4.4.1.-) (Protein ABERRANT LATERAL ROOT FORMATION 1) (Protein HOOKLESS 3) (Protein ROOTY) (Protein ROOTY 1) (Protein SUPERROOT 1) (Q9SIV0)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: C-S lyase involved in glucosinolate biosynthesis. Converts S-(alkylacetohydroximoyl)-L-cysteine to thiohydroximate. Functions in auxin homeostasis. Probably required for glucosinolate activation in response to pathogens.
Interaction partners:
- Cytochrome P450 83B1
- UDP-glycosyltransferase 74B1
- Cytosolic sulfotransferase 16
- Cytochrome P450 83A1
- Tryptophan N-monooxygenase 1
- Cytosolic sulfotransferase 17
- Cytosolic sulfotransferase 18
- Gamma-glutamyl peptidase 1
- Methylthioalkylmalate synthase 1, chloroplastic
- Dihomomethionine N-hydroxylase
Sequence:
MSEEQPHANLAVPAFKTEKEPITQTRNGQSSVWRFGGSDKAAKASTVTLRGVIYMLFDNCGKDVNKTILPLGHGDPSVYPCFRTCIEAEDAVVDVLRSGKGNSYGPGAGILPARRAVADYMNRDLPHKLTPEDIFLTAGCNQGIEIVFESLARPNANILLPRPGFPHYDARAAYSGLEVRKFDLLPEKEWEIDLEGIEAIADENTVAMVVINPNNPCGNVYSHDHLKKVAETARKLGIMVISDEVYDRTIFGDNPFVSMGKFASIVPVLTLAGISKGWVVPGWKIGWIALNDPEGVFETTKVLQSIKQNLDVTPDPATIIQAALPAILEKADKNFFAKKNKILKHNVDLVCDRLKDIPCVVCPKKPESCTYLLTKLELSLMDNIKDDIDFCVKLAREENLVFLPGDALGLKNWMRITIGVEAHMLEDALERLKGFCTRHAKKTETETESLQALKLSDNNLEM
Protein: L-lactate dehydrogenase (cytochrome) (EC 1.1.2.3) (Cytochrome b2) (Flavocytochrome b2) (FCB2) (L-lactate ferricytochrome c oxidoreductase) (L-LCR) (P00175)
Organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Function: Catalyzes the oxidation of (S)-lactate (L-lactate) to pyruvate with subsequent transfer of electrons to cytochrome c. Is involved in the utilization of (S)-lactate as a sole source of carbon for growth. Can also use ferricyanide as an electron acceptor in vitro.
Subcellular location: Mitochondrion intermembrane space {ECO:0000269|PubMed:11502169, ECO:0000269|PubMed:22984289}.
Interaction partners:
- D-lactate dehydrogenase [cytochrome] 1, mitochondrial
- D-2-hydroxyglutarate--pyruvate transhydrogenase DLD2
- D-2-hydroxyglutarate--pyruvate transhydrogenase DLD3
- Pyruvate kinase 1
- Pyruvate kinase 2
- External NADH-ubiquinone oxidoreductase 1, mitochondrial
- External NADH-ubiquinone oxidoreductase 2, mitochondrial
- Glycerol-3-phosphate dehydrogenase, mitochondrial
- Pyruvate carboxylase 1
- Pyruvate carboxylase 2
Sequence:
MLKYKPLLKISKNCEAAILRASKTRLNTIRAYGSTVPKSKSFEQDSRKRTQSWTALRVGAILAATSSVAYLNWHNGQIDNEPKLDMNKQKISPAEVAKHNKPDDCWVVINGYVYDLTRFLPNHPGGQDVIKFNAGKDVTAIFEPLHAPNVIDKYIAPEKKLGPLQGSMPPELVCPPYAPGETKEDIARKEQLKSLLPPLDNIINLYDFEYLASQTLTKQAWAYYSSGANDEVTHRENHNAYHRIFFKPKILVDVRKVDISTDMLGSHVDVPFYVSATALCKLGNPLEGEKDVARGCGQGVTKVPQMISTLASCSPEEIIEAAPSDKQIQWYQLYVNSDRKITDDLVKNVEKLGVKALFVTVDAPSLGQREKDMKLKFSNTKAGPKAMKKTNVEESQGASRALSKFIDPSLTWKDIEELKKKTKLPIVIKGVQRTEDVIKAAEIGVSGVVLSNHGGRQLDFSRAPIEVLAETMPILEQRNLKDKLEVFVDGGVRRGTDVLKALCLGAKGVGLGRPFLYANSCYGRNGVEKAIEILRDEIEMSMRLLGVTSIAELKPDLLDLSTLKARTVGVPNDVLYNEVYEGPTLTEFEDA
Protein: Transcription factor ILI5 (OsILI5) (Basic helix-loop-helix protein 170) (OsbHLH170) (Protein BRASSINOSTEROID UP-REGULATED 1-LIKE 1) (OsBUL1) (Protein INCREASED LEAF INCLINATION 5) (Protein POSITIVE REGULATOR OF GRAIN LENGTH 2) (bHLH transcription factor bHLH170) (Q6YUX0)
Organism: Oryza sativa subsp. japonica (Rice)
Function: Atypical and probable non DNA-binding bHLH transcription factor that acts as a positive regulator of grain size. Involved in the brassinosteroid (BR) signaling pathway. Binds the transcription repressor APG and forms a heterodimer of antagonistic basic helix-loop-helix transcription factors that regulates grain length and weight by controlling cell elongation in lemma and palea. Contributes, together with LO9-177 and BC1, to the promotion of leaf inclination and grain size by modulating cell elongation.
Subcellular location: Nucleus {ECO:0000255|PROSITE-ProRule:PRU00981, ECO:0000269|PubMed:23136524, ECO:0000269|PubMed:27879391}. Cytoplasm {ECO:0000269|PubMed:27879391}.
Interaction partners:
Sequence:
MSSRRSSRGSISEEEINELISKLQSLLPNSRRRGSSQASTTKLLKETCNYIKSLHREVDDLSDRLSDLMATMDHNSPGAEIIRSILRS
Protein: Outer spore wall assembly protein SHE10 (Sensitivity to high expression protein 10) (P53075)
Organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Function: Involved in spore wall assembly. May be a component of the mitochondrial RNase MRP (MtMRP), a ribonucleoprotein endoribonuclease involved in the cleaving RNA transcripts to generate primers for DNA replication in mitochondria. Causes growth arrest when highly overexpressed.
Subcellular location: Mitochondrion {ECO:0000269|PubMed:20086051}.
Interaction partners:
- Outer spore wall protein 6
- Ectonucleotide pyrophosphatase/phosphodiesterase 2
- Outer spore wall protein 4
- Ectonucleotide pyrophosphatase/phosphodiesterase 1
- Outer spore wall protein RRT8
Sequence:
MGKLIKLITTLTVLVSLLQYCCEFNSGSISCERTQTLCHYTNPRVWNTYFSRNCELYKNKVSPGFDIVARKYDTAVKPVIDDATVKVNKVAIQPAFKVIHSQCKKWNCGKYYQLVRSPMVKTRRFFFAKYNAFVKPNLDKFFTAEFRSHLKERILKYKNIGHYYFTITSRCIKSKYDFIVGNTEEKLMGKFKNKDTHGIHGSVTREPSSEDMVLTVSTMESDEEELTTTSTQTVVETITLDQEEASAVANHAHDDEASTDVEGSTDVNVNEQALLQEDFDMWSETILQKTQDVIQLFEKDVSKYINGKLVEEANHFKAKFQSLDDKSKKFFSKISLAINDIECVEGIDSETGKKIFFDKSGSTEISQYITRELVREYFNETRSTLDELTNAMEKDLSEITDEIEKKVNAIREENVEVFEEWGDIIVNEWSKRMAYVDVINAHMGADDDTTLDEEKAKSSVNWKKFLKGKKQIIESRDKLAHHSADLSRVNAFRQKVQKKILSFTQESGEFLYILRSKANLQFQERERKERERKEREKAAAEEFQRQQELLRQQEEEDEEDVSYTSTSTITTTITMTL
Protein: INO80 complex subunit 1 (Q9UTM0)
Organism: Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Function: Component of the INO80 complex which remodels chromatin by shifting nucleosomes and is involved in DNA repair.
Subcellular location: Nucleus {ECO:0000269|PubMed:16823372}. Cytoplasm {ECO:0000269|PubMed:16823372}.
Interaction partners:
- Chromatin-remodeling complex subunit ies6
- INO80 complex subunit 3
- RuvB-like helicase 1
- Actin-like protein arp5
- Probable actin-related protein 8
- INO80 complex subunit 4
- INO80 complex subunit 5
- HMG box-containing protein C10F6.08c
- Actin
- Chromatin-remodeling ATPase INO80
Sequence:
MSISSDTSGSVPGSPIDLEPESETICHWQSCEQDLLTLDNLVHHIHNGTTSNLRLISNINSILDHIGNRRPKYTCEWDDCPRKGMVQTSRFALVAHLRSHTGEKPFICSVPECDRSFTRSDALAKHMRTVHEADTLRPSDPIPKAHPMHPQNVANAMVQSAREARAQQQMHGVGNTNEDVENWLDAASMPKTSHDMYRLQKRKLQWVKEERTMLANHLEALERKLIDARNRKEKILNEIVKQVDPSISR
Protein: RRM domain-containing protein (B3GWA1)
Organism: Caenorhabditis elegans
Interaction partners:
- RRM domain-containing protein
- 5H1
- Collagen alpha-5
- CLIP domain-containing serine protease
- PPM-type phosphatase domain-containing protein
- Tyrosine-protein phosphatase domain-containing protein
- Uncharacterized protein C40H1.2
- Exostosin domain-containing protein
Sequence:
MSGARRDNRRSNGRDDSSRVAKAENDRKPGRENRGGDEKRGNSNNAARSGGGGGGNRGGAERGIAPAQQPYDNNGGHRSGGGGGRSGGGGTSFNGAAFTESQLMDEVPKKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAECYLSGKGFAFLRLDTRAHAESAKEAIDGRIIHGRQVRVRFAVHGAAIRVKELSPTVSNEMLYHAFSHFGDVERAVHIVDEKGRPTGEGIVEFERKPNCNEAMAAIRDKVFLLTASPKPLICEVLEPRDEDDGLAERMIPRTPGLSKERELGPRFPTPNSFEYVYGMKWKELYVVEQKRRAQLDEELRESRRRLESDMELAYQDYQAQMLREDLQRRQQELERLEAARRERMRGLGGPPPGMPGGVPPQAQPFNPHGGSMFGGPGGPGGPPPFGQPFQQAPQGMFNVPTGPPPLMGGGGDPRGPPGGMGGPPGHGGMGGPPGHGGQGGPPGHGGMGGPPPGQGGPGGPGGPGGPGGMLPKSHGRSNMIEGVQRLLQIFKSDNGPPGGMPGRDYPPQQGPGGMFGSYGDGGYPPEKKQRR
Protein: Four and a half LIM domains 1 (A0A0D9SFZ9)
Organism: Homo sapiens (Human)
Interaction partners:
Sequence:
MAEKFDCHYCRDPLQGKKYVQKDGHHCCLKCFDKFCANTCVECRKPIGADSKEVHYKNRFWHDTCFRCAKCLHPLANETFVAKDNKILCNKCTTREDSPKCKGCFKAIVAGDQNVEYKGTVWHKDCFTCSNCKQVIGTGSFFPKGEDFYCVTCHETKFAKHCVKCNKAITSGGIT
Protein: Protein DMP4 (AtDMP4) (Q8L928)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Involved in membrane remodeling.
Subcellular location: Vacuole membrane {ECO:0000269|PubMed:20712629}; Multi-pass membrane protein {ECO:0000255}.
Interaction partners:
- Expressed protein
- Ribonuclease 3
- Nuclear transcription factor Y subunit C-8
- UPF0496 protein At3g49070
- Aspartic proteinase A3
- Serine carboxypeptidase-like 48
- Plant self-incompatibility protein S1 family
- Plant invertase/pectin methylesterase inhibitor superfamily protein
- STAY-GREEN-like protein
- Glycine-rich protein homolog
Sequence:
MEIKVDEGHQKGTKEDITRPLLEEDKDFPDIERTTWIQKAIGQTFQTTAHLANLLPTGTVLAFQLLSPIFSNGGQCDLVSKIMTSTLVAICGFSCFILSFTDSYKDKNGTICYGLATIHGFWIIDGSTTLPQELSKRYKLRFIDFVHAFMSLFVFGAVVLFDRNAVNCFFPSPSAEALEVLTALPVGVGVFSSMLFATFPTTRNGIGFPLSSK
Protein: Zinc finger protein basonuclin-2 (Q6ZN30)
Organism: Homo sapiens (Human)
Function: Probable transcription factor specific for skin keratinocytes. May play a role in the differentiation of spermatozoa and oocytes. May also play an important role in early urinary-tract development.
Subcellular location: Nucleus {ECO:0000269|PubMed:15081112}.
Interaction partners:
- Serine/arginine-rich splicing factor 2
Sequence:
MAHLGPTPPPHSLNYKSEDRLSEQDWPAYFKVPCCGVDTSQIESEEAEVDVRERETQRDREPKRARDLTLRDSCTDNSMQFGTRTTTAEPGFMGTWQNADTNLLFRMSQQAIRCTLVNCTCECFQPGKINLRTCDQCKHGWVAHALDKLSTQHLYHPTQVEIVQSNVVFDISSLMLYGTQAVPVRLKILLDRLFSVLKQEEVLHILHGLGWTLRDYVRGYILQDAAGKVLDRWAIMSREEEIITLQQFLRFGETKSIVELMAIQEKEGQAVAVPSSKTDSDIRTFIESNNRTRSPSLLAHLENSNPSSIHHFENIPNSLAFLLPFQYINPVSAPLLGLPPNGLLLEQPGLRLREPSLSTQNEYNESSESEVSPTPYKNDQTPNRNALTSITNVEPKTEPACVSPIQNSAPVSDLTKTEHPKSSFRIHRMRRMGSASRKGRVFCNACGKTFYDKGTLKIHYNAVHLKIKHRCTIEGCNMVFSSLRSRNRHSANPNPRLHMPMLRNNRDKDLIRATSGAATPVIASTKSNLALTSPGRPPMGFTTPPLDPVLQNPLPSQLVFSGLKTVQPVPPFYRSLLTPGEMVSPPTSLPTSPIIPTSGTIEQHPPPPSEPVVPAVMMATHEPSADLAPKKKPRKSSMPVKIEKEIIDTADEFDDEDDDPNDGGAVVNDMSHDNHCHSQEEMSPGMSVKDFSKHNRTRCISRTEIRRADSMTSEDQEPERDYENESESSEPKLGEESMEGDEHIHSEVSEKVLMNSERPDENHSEPSHQDVIKVKEEFTDPTYDMFYMSQYGLYNGGGASMAALHESFTSSLNYGSPQKFSPEGDLCSSPDPKICYVCKKSFKSSYSVKLHYRNVHLKEMHVCTVAGCNAAFPSRRSRDRHSANINLHRKLLTKELDDMGLDSSQPSLSKDLRDEFLVKIYGAQHPMGLDVREDASSPAGTEDSHLNGYGRGMAEDYMVLDLSTTSSLQSSSSIHSSRESDAGSDEGILLDDIDGASDSGESAHKAEAPALPGSLGAEVSGSLMFSSLSGSNGGIMCNICHKMYSNKGTLRVHYKTVHLREMHKCKVPGCNMMFSSVRSRNRHSQNPNLHKNIPFTSVD
Protein: T-lymphocyte activation antigen CD80 (Activation B7-1 antigen) (B7) (CD antigen CD80) (Q00609)
Organism: Mus musculus (Mouse)
Function: Involved in the costimulatory signal essential for T lymphocytes activation. T-cell proliferation and cytokine production is induced by the binding of CD28 or CTLA-4 to this receptor.
Subcellular location: Cell membrane {ECO:0000269|PubMed:16339518}; Single-pass type I membrane protein {ECO:0000250|UniProtKB:P33681}.
Interaction partners:
- T-cell-specific surface glycoprotein CD28
- T-lymphocyte activation antigen CD86
- Programmed cell death 1 ligand 1
- Cytotoxic T-lymphocyte protein 4
- Tumor necrosis factor receptor superfamily member 5
- CD40 ligand
- Intercellular adhesion molecule 1
- Programmed cell death protein 1
- Inducible T-cell costimulator
- Tumor necrosis factor receptor superfamily member 4
Sequence:
MACNCQLMQDTPLLKFPCPRLILLFVLLIRLSQVSSDVDEQLSKSVKDKVLLPCRYNSPHEDESEDRIYWQKHDKVVLSVIAGKLKVWPEYKNRTLYDNTTYSLIILGLVLSDRGTYSCVVQKKERGTYEVKHLALVKLSIKADFSTPNITESGNPSADTKRITCFASGGFPKPRFSWLENGRELPGINTTISQDPESELYTISSQLDFNTTRNHTIKCLIKYGDAHVSEDFTWEKPPEDPPDSKNTLVLFGAGFGAVITVVVIVVIIKCFCKHRSCFRRNEASRETNNSLTFGPEEALAEQTVFL
Protein: Ubiquitin-like protein, putative (Q386A3)
Organism: Trypanosoma brucei brucei (strain 927/4 GUTat10.1)
Interaction partners:
- 40S ribosomal protein S15, putative
- Small ribosomal subunit protein uS5
- 40S ribosomal protein S25
- 40S ribosomal protein S13, putative
- 40S ribosomal protein S33, putative
- 40S ribosomal protein S24
- 40S ribosomal protein S17, putative
- 60S ribosomal protein L19, putative
- 40S ribosomal protein S5, putative
- 40S ribosomal protein S26
Sequence:
MHINVSGARPEHTINGLEVDVEEGVEGLRRRIGERLGAPPEQLRLIHMGQLIDGSRPLSSFLQDGTTVHVVVSPGAANNNTSGDARRGVSGGMDITASIMSPTGLTEFLTNIIPDIRNASTGNARDGVPVMMSIARTMLPAAVQAFSRFEGTQTPQQTRTQSQNQTQQSQQPQEEPQAGQQHMQTHHQSTRVLIGRNSSTPEPTSLHIHLHVTTNDLDELPDRLERLGRRIYLPSLSVSTHVEPTSEISGNHRSSEHNAGRTADAAAPHSNENNTTEADEDEIVSDGLILSLLGQLASTTRGNPPNDGEFGTHGLGNLLIRSMIRENPTAFLGICVGNWESFAHFQSRISEVTTQWLAAGRHAGPVTPEERQRRIEQEADRLARLVAENLELVRAFEQERRPNIDVAAELRRFVIYAHETVIGAIVNPHVSGSAWAQGVRTALVFAGGIAMDRASTWFTRGAESLTRLAGLVASAAVQQFTSLDQSTAEQLAAIIDGTLPTTLLELQQEYQSLPRPEGEPGIFNETASVTTTSEGANANELLDICLEEFCEGGPDDSSQAVPDVPPDGYAGELEGALRALGTLPDDAAEDMMNRAQRFCHEAPTGRTGERSSMWKQLERR
Protein: Ribulose bisphosphate carboxylase small subunit, chloroplastic (NbRbCS) (RuBisCO small subunit) (A0A0S4IJL0)
Organism: Nicotiana benthamiana
Function: RuBisCO catalyzes two reactions: the carboxylation of D-ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site. Although the small subunit is not catalytic it is essential for maximal activity (By similarity). Involved in antiviral defenses.
Subcellular location: Plastid, chloroplast {ECO:0000250|UniProtKB:P69249, ECO:0000255|HAMAP-Rule:MF_00860}.; SUBCELLULAR LOCATION: Cell junction, plasmodesma {ECO:0000269|PubMed:23148080}. Note=(Microbial infection) May be present in virus replication complexes (VRCs) of tobamovirus infected cells. {ECO:0000269|PubMed:23148080}.
Interaction partners:
Sequence:
MASSVLSSAAVATRSNVAQANMVAPFTGLKSAASFPVSRKQNLDITSIASNGGRVQCMQVWPPINKKKYETLSYLPDLSVEQLLSEIEYLLKNGWVPCLEFETEHGFVYREHHKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVEEAKKAYPQAWIRIIGFDNVRQVQCISFIAYKPEGY
Protein: UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase MGP4 (EC 2.4.2.-) (Protein MALE GAMETOPHYTE DEFECTIVE 4) (Rhamnogalacturonan xylosyltransferase MGP4) (Q9M146)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Catalyzes the transfer of D-xylose from UDP-alpha-D-xylose onto L-fucose. Probably involved in the biosynthesis of rhamnogalacturonan II (RG-II) through xylosylation of the internal fucose moiety of the A-chain of RG-II, a structurally complex pectic polysaccharide of the primary cell wall. RG-II is essential for the cell wall integrity of rapidly growing tissues such as roots and pollen tube growth and elongation.
Subcellular location: Golgi apparatus membrane {ECO:0000305|PubMed:21288267, ECO:0000305|PubMed:21421394}; Single-pass type II membrane protein {ECO:0000305|PubMed:21288267, ECO:0000305|PubMed:21421394}.
Interaction partners:
- Guanine nucleotide-binding protein subunit beta
- Nucleotidylyl transferase superfamily protein
- AUGMIN subunit 6
- Sialyltransferase-like protein 1
- Sialyltransferase-like protein 2
- 2-dehydro-3-deoxyphosphooctonate aldolase 1
- BTB/POZ domain-containing protein At1g30440
- 2-dehydro-3-deoxyphosphooctonate aldolase 2
- Probable pectin methylesterase CGR3
- Glycosylinositol phosphorylceramide mannosyl transferase 1
Sequence:
MAQQKFLHQRPIQNPFTNPFSSSPLSTSSISNRPISLLSRNGLLLLLALLVILGVFLPWAGSPLFPSPNKLSPSQSKWRDYSLPQAVKFVAKNGTVIVCAVSYPYLPFLNNWLISVSRQKHQDQVLVIAEDYATLYKVNEKWPGHAVLIPPALDSQTAHKFGSQGFFNFTARRPQHLLEILELGYNVMYNDVDMVWLQDPFQYLEGKHDAYFMDDMTAIKPLDHSHDLPPPGKKGRTYICSCMIFLRPTNGAKLLMKKWIEELETQPWSRAKKANDQPGFNWALNKTANQVDMYLLSQAAFPTGGLYFKNKTWVKETKGKHAIIHNNYIVGFEKKIKRFRDFNLWLVDDHASESPLGKLE