wanglab/gogpt-training-data huggingface dataset:
Protein: RNA1 polyprotein (B RNA polyprotein) (Bottom component polyprotein) (Genome polyprotein B) (P1) [Cleaved into: Protease cofactor (32 kDa protein); Putative helicase (EC 3.6.4.-) (58 kDa protein) (Membrane-binding protein) (NTP-binding protein) (NTB); Viral genome-linked protein (VPg); Picornain 3C-like protease (3C-like protease) (EC 3.4.22.-) (24 kDa protein); RNA-directed RNA polymerase (EC 2.7.7.48) (87 kDa protein)] (P03600)
Organism: Cowpea mosaic virus (strain SB) (CPMV)
Function: Thiol protease that cleaves the RNA1 and RNA2 polyproteins.
Subcellular location: [Putative helicase]: Host membrane {ECO:0000305}; Single-pass membrane protein {ECO:0000305}. Host cytoplasm, host perinuclear region {ECO:0000269|PubMed:12021362}.; SUBCELLULAR LOCATION: [RNA-directed RNA polymerase]: Host endoplasmic reticulum {ECO:0000269|PubMed:10864669}.; SUBCELLULAR LOCATION: [Protease cofactor]: Host cytoplasm, host perinuclear region {ECO:0000269|PubMed:12021362}.
Interaction partners:
Sequence:
MGLPEYEADSEALLSQLTIEFTPGMTVSSLLAQVTTNDFHSAIEFFAAEKAVDIEGVHYNAYMQQIRKNPSLLRISVVAYAFHVSDMVAETMSYDVYEFLYKHYALFISNLVTRTLRFKELLLFCKQQFLEKMQASIVWAPELEQYLQVEGDAVAQGVSQLLYKMVTWVPTFVRGAVDWSVDAILVSFRKHFEKMVQEYVPMAHRVCSWLSQLWDKIVQWISQASETMGWFLDGCRDLMTWGIATLATCSALSLVEKLLVAMGFLVEPFGLSGIFLRTGVVAAACYNYGTNSKGFAEMMALLSLAANCVSTVIVGGFFPGEKDNAQSSPVILLEGLAGQMQNFCETTLVSVGKTCTAVNAISTCCGNLKALAGRILGMLRDFIWKTLGFETRFLADASLLFGEDVDGWLKAISDLRDQFIAKSYCSQDEMMQILVLLEKGRQMRKSGLSKGGISPAIINLILKGINDLEQLNRSCSVQGVRGVRKMPFTIFFQGKSRTGKSLLMSQVTKDFQDHYGLGGETVYSRNPCDQYWSGYRRQPFVLMDDFAAVVTEPSAEAQMINLISSAPYPLNMAGLEEKGICFDSQFVFVSTNFLEVSPEAKVRDDEAFKNRRHVIVQVSNDPAKAYDAANFASNQIYTILAWKDGRYNTVCVIEDYDELVAYLLTRSQQHAEEQEKNLANMMKSATFESHFKSLVEVLELGSMISAGFDIIRPEKLPSEAKEKRVLYSIPYNGEYCNALIDDNYNVTCWFGECVGNPEQLSKYSEKMLLGAYEFLLCSESLNVVIQAHLKEMVCPHHYDKELNFIGKIGETYYHNQMVSNIGSMQKWHRAILFGIGVLLGKEKEKTWYQVQVANVKQALYDMYTKEIRDWPMPIKVTCGIVLAAIGGSAFWKVFQQLVGSGNGPVLMGVAAGAFSAEPQSRKPNRFDMQQYRYNNVPLKRRVWADAQMSLDQSSVAIMSKCRANLVFGGTNLQIVMVPGRRFLACKHFFTHIKTKLRVEIVMDGRRYYHQFDPANIYDIPDSELVLYSHPSLEDVSHSCWDLFCWDPDKELPSVFGADFLSCKYNKFGGFYEAQYADIKVRTKKECLTIQSGNYVNKVSRYLEYEAPTIPEDCGSLVIAHIGGKHKIVGVHVAGIQGKIGCASLLPPLEPIAQAQGAEEYFDFLPAEENVSSGVAMVAGLKQGVYIPLPTKTALVETPSEWHLDTPCDKVPSILVPTDPRIPAQHEGYDPAKSGVSKYSQPMSALDPELLGEVANDVLELWHDCAVDWDDFGEVSLEEALNGCEGVEYMERIPLATSEGFPHILSRNGKEKGKRRFVQGDDCVVSLIPGTTVAKAYEELEASAHRFVPALVGIECPKDEKLPMRKVFDKPKTRCFTILPMEYNLVVRRKFLNFVRFIMANRHRLSCQVGINPYSMEWSRLAARMKEKGNDVLCCDYSSFDGLLSKQVMDVIASMINELCGGEDQLKNARRNLLMACCSRLAICKNTVWRVECGIPSGFPMTVIVNSIFNEILIRYHYKKLMREQQAPELMVQSFDKLIGLVTYGDDNLISVNAVVTPYFDGKKLKQSLAQGGVTITDGKDKTSLELPFRRLEECDFLKRTFVQRSSTIWDAPEDKASLWSQLHYVNCNNCEKEVAYLTNVVNVLRELYMHSPREATEFRRKVLKKVSWITSGDLPTLAQLQEFYEYQRQQGGADNNDTCDLLTSVDLLGPPLSFEKEAMHGCKVSEEIVTKNLAYYDFKRKGEDEVVFLFNTLYPQSSLPDGCHSVTWSQGSGRGGLPTQSWMSYNISRKDSNINKIIRTAVSSKKRVIFCARDNMVPVNIVALLCAVRNKLMPTAVSNATLVKVMENAKAFKFLPEEFNFAFSDV
Protein: Glycerophosphodiester phosphodiesterase GDPD2 (EC 3.1.4.46) (Glycerophosphodiester phosphodiesterase 2) (AtGDPD2) (Q9FLM1)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Interaction partners:
- Probable choline kinase 2
- Probable choline kinase 3
- Probable choline kinase 1
- Glycerophosphodiester phosphodiesterase GDPD5
- Alpha/beta-Hydrolases superfamily protein
- Alpha/beta-Hydrolases superfamily protein
- Glycerophosphodiester phosphodiesterase GDPD6
- Glycerophosphodiester phosphodiesterase GDPD1, chloroplastic
- Glycerophosphodiester phosphodiesterase GDPD3
- Purple acid phosphatase 22
Sequence:
MALRTVLVSDVPSLPDSVYGLSEGLELSKPTSFRLPGFSVIGHRGIGMNVLQSSDRRARGVKENSILSFNSAAKYPIDFIEFDVQVTKDDCPVIFHDDFIYSEENGIVNESRVTDLSLSEFLLYGPQKETEKIGKTLMRKSKEGKVLKWDVDLDDSLCTLQEAFEQVEQTLGFNIELKFDDQTVYEREFLVHILRSVLQVVSNYAKDRPVIFSSFQPDAAKLVRELQSTYPVFFLTDAGNEIHNDERRNSLEEAIQVCLEGGLQGIVSEVKGVFRNPAAISKIKESNLSLLTYGKLNNVGEAVYMQYVMGIDGVIVDFVEEIIESTTRMMIRPPPSSSPLPSPSKDDDVAITRPEFSQKEISFLLKLLSQLIQH
Protein: Inner membrane protein YmgF (P58034)
Organism: Escherichia coli (strain K12)
Function: Could be involved in cell division. May participate in the stabilization of the cell divisome under specific conditions.
Subcellular location: Cell inner membrane {ECO:0000269|PubMed:18978050}; Multi-pass membrane protein {ECO:0000269|PubMed:18978050}. Note=Localizes to the division septum. Localization requires FtsZ, FtsA, FTsQ and FtsN.
Interaction partners:
- Cell division protein FtsQ
- Cell division protein FtsL
- Divisome-associated membrane protein Blr
- Cell division protein FtsN
- Peptidoglycan D,D-transpeptidase FtsI
Sequence:
MNNSNNLDYFTLYIIFSIAFMLITLLVILIAKPSTGLGEVLVTINLLNALVWLAINLVNRLRERLVNHRDQQ
Protein: Hepatocyte nuclear factor 4-gamma (HNF-4-gamma) (Nuclear receptor subfamily 2 group A member 2) (Q14541)
Organism: Homo sapiens (Human)
Function: Transcription factor. Has a lower transcription activation potential than HNF4-alpha.
Subcellular location: Nucleus {ECO:0000255|PROSITE-ProRule:PRU00407}.
Interaction partners:
- Hepatocyte nuclear factor 1-alpha
- Hepatocyte nuclear factor 3-beta
- 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 1
Sequence:
MNTTDNGVNCLCAICGDRATGKHYGASSCDGCKGFFRRSIRKSHVYSCRFSRQCVVDKDKRNQCRYCRLRKCFRAGMKKEAVQNERDRISTRRSTFDGSNIPSINTLAQAEVRSRQISVSSPGSSTDINVKKIASIGDVCESMKQQLLVLVEWAKYIPAFCELPLDDQVALLRAHAGEHLLLGATKRSMMYKDILLLGNNYVIHRNSCEVEISRVANRVLDELVRPFQEIQIDDNEYACLKAIVFFDPDAKGLSDPVKIKNMRFQVQIGLEDYINDRQYDSRGRFGELLLLLPTLQSITWQMIEQIQFVKLFGMVKIDNLLQEMLLGGASNDGSHLHHPMHPHLSQDPLTGQTILLGPMSTLVHADQISTPETPLPSPPQGSGQEQYKIAANQASVISHQHLSKQKQL
Protein: Vomeronasal type-2 receptor 26 (Putative pheromone receptor V2R1b) (Vomeronasal type-2 receptor 1b) (Q6TAC4)
Organism: Mus musculus (Mouse)
Function: Putative pheromone receptor.
Subcellular location: Cell membrane {ECO:0000305}; Multi-pass membrane protein {ECO:0000305}.
Interaction partners:
Sequence:
MKLLTAFSPLVVLILFQEQISCYYLTKYASSGYYQDADFVIGGLFSLRVTDGDTFISRSGVEDTSHIAEYVFADLIKYYQHILAMVFAIEKINKDPNILFNKSLGFFLFNVNFIEMKAAEGSMALLSGESPPIPNYSCRPEKTDKLVAVIGGISTSISIQISRVLSLYNVPQISYAPFDQILGTRVQLQSPYQFSMHTAALYQGIVQLLLYFTWIWVGLVVPDDMRGELYLRDITKEMISHGICFAFAEKVTEYSSMDTVNWKHFMERLTLTPVIITVGDTHSLLRIVYFVIFYNLSGNVWITTSDWYITTLPFEQNLIYTHFGGGLSFSFHMDEILGFKDFLRSVQPRKYPHDIFIRHVWSSLFGCPHYYQHRLWDLSQCEPNGSLSTRPLHAWDMNTSPYSYKVYAAVYAIAQALHEELSLRVEGDSSNKCLLQAPLPWKLHPFLQKGQLGRSTNEENTVNKEVSAIKLDIFNYQSLQSGTEAHVKVGEFVFDSHSVQHLSLNDKIITWGKHRSQTPLSVCSQSCPFGFSKTAVEGKPFCCFDCVPCPDGEIANKTDMDQCIKCPEDQYPNKQRNQCLPKIMVFLAHEDPLGTVLVSLAISLSAFSAMILGLFICYRETPIVRANNRNLSYLLLISLKLCFSCSLMFIGQPRTVTCVLRQIIFGIVFSIVISAILAKTFIVVMAFKAIKPGSILKMGMVTRLSNAIVCCGSIIQVCICAVWLGTYPPFPDVDMHSEFGQIILWCNEGSTLAFYCVLGYLGFLASLSLLIAFLARRLPDSFNEAKTITFSMLVFCSVWISFVPAYLSSKGKTMVAVEILSILASSAGLLGCIFLPKCYVILLKSGGHSRKKFFK
Protein: Transferrin receptor protein 1 (TR) (TfR) (TfR1) (Trfr) (CD antigen CD71) (Q62351)
Organism: Mus musculus (Mouse)
Function: Cellular uptake of iron occurs via receptor-mediated endocytosis of ligand-occupied transferrin receptor into specialized endosomes (By similarity). Endosomal acidification leads to iron release. The apotransferrin-receptor complex is then recycled to the cell surface with a return to neutral pH and the concomitant loss of affinity of apotransferrin for its receptor. Transferrin receptor is necessary for development of erythrocytes and the nervous system (By similarity). Upon stimulation, positively regulates T and B cell proliferation through iron uptake. Acts as a lipid sensor that regulates mitochondrial fusion by regulating activation of the JNK pathway (By similarity). When dietary levels of stearate (C18:0) are low, promotes activation of the JNK pathway, resulting in HUWE1-mediated ubiquitination and subsequent degradation of the mitofusin MFN2 and inhibition of mitochondrial fusion (By similarity). When dietary levels of stearate (C18:0) are high, TFRC stearoylation inhibits activation of the JNK pathway and thus degradation of the mitofusin MFN2 (By similarity).
Subcellular location: Cell membrane {ECO:0000250|UniProtKB:P02786}; Single-pass type II membrane protein {ECO:0000250|UniProtKB:P02786}. Melanosome {ECO:0000250|UniProtKB:P02786}.
Interaction partners:
- Hereditary hemochromatosis protein homolog
- Serotransferrin
- Ferritin heavy chain
- Hemojuvelin
- Inhibitor of carbonic anhydrase
- Heat shock cognate 71 kDa protein
- Beta-2-microglobulin
- Lactotransferrin
- Transferrin receptor protein 2
- Ferroportin
Sequence:
MMDQARSAFSNLFGGEPLSYTRFSLARQVDGDNSHVEMKLAADEEENADNNMKASVRKPKRFNGRLCFAAIALVIFFLIGFMSGYLGYCKRVEQKEECVKLAETEETDKSETMETEDVPTSSRLYWADLKTLLSEKLNSIEFADTIKQLSQNTYTPREAGSQKDESLAYYIENQFHEFKFSKVWRDEHYVKIQVKSSIGQNMVTIVQSNGNLDPVESPEGYVAFSKPTEVSGKLVHANFGTKKDFEELSYSVNGSLVIVRAGEITFAEKVANAQSFNAIGVLIYMDKNKFPVVEADLALFGHAHLGTGDPYTPGFPSFNHTQFPPSQSSGLPNIPVQTISRAAAEKLFGKMEGSCPARWNIDSSCKLELSQNQNVKLIVKNVLKERRILNIFGVIKGYEEPDRYVVVGAQRDALGAGVAAKSSVGTGLLLKLAQVFSDMISKDGFRPSRSIIFASWTAGDFGAVGATEWLEGYLSSLHLKAFTYINLDKVVLGTSNFKVSASPLLYTLMGKIMQDVKHPVDGKSLYRDSNWISKVEKLSFDNAAYPFLAYSGIPAVSFCFCEDADYPYLGTRLDTYEALTQKVPQLNQMVRTAAEVAGQLIIKLTHDVELNLDYEMYNSKLLSFMKDLNQFKTDIRDMGLSLQWLYSARGDYFRATSRLTTDFHNAEKTNRFVMREINDRIMKVEYHFLSPYVSPRESPFRHIFWGSGSHTLSALVENLKLRQKNITAFNETLFRNQLALATWTIQGVANALSGDIWNIDNEF
Protein: Cytosolic isocitrate dehydrogenase [NADP] (EC 1.1.1.42) (Q9SRZ6)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: May supply 2-oxoglutarate for amino acid biosynthesis and ammonia assimilation via the glutamine synthetase/glutamate synthase (GS/GOGAT) pathway. May be involved in the production of NADPH to promote redox signaling or homeostasis in response to oxidative stress, or redox signaling linked to defense responses.
Subcellular location: Cytoplasm, cytosol {ECO:0000255}.
Interaction partners:
- Aconitate hydratase 3, mitochondrial
- Aconitate hydratase 1
- Aconitate hydratase 2, mitochondrial
- Isocitrate dehydrogenase catalytic subunit 6, mitochondrial
- 2-oxoglutarate dehydrogenase, mitochondrial
- 2-oxoglutarate dehydrogenase, mitochondrial
- Isocitrate dehydrogenase regulatory subunit 3, mitochondrial
- Isocitrate dehydrogenase regulatory subunit 1, mitochondrial
- Putative isocitrate dehydrogenase subunit-like 4
- Isocitrate dehydrogenase regulatory subunit 2, mitochondrial
Sequence:
MAFEKIKVANPIVEMDGDEMTRVIWKSIKDKLITPFVELDIKYFDLGLPHRDATDDKVTIESAEATKKYNVAIKCATITPDEGRVTEFGLKQMWRSPNGTIRNILNGTVFREPIICKNVPKLVPGWTKPICIGRHAFGDQYRATDAVIKGPGKLTMTFEGKDGKTETEVFTFTGEGGVAMAMYNTDESIRAFADASMNTAYEKKWPLYLSTKNTILKKYDGRFKDIFQEVYEASWKSKYDAAGIWYEHRLIDDMVAYALKSEGGYVWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHFRVHQKGGETSTNSIASIFAWTRGLAHRAKLDDNAKLLDFTEKLEAACVGTVESGKMTKDLALIIHGSKLSRDTYLNTEEFIDAVAAELKERLNA
Protein: Leucine-rich repeat protein (LRRP) (Q38C37)
Organism: Trypanosoma brucei brucei (strain 927/4 GUTat10.1)
Interaction partners:
Sequence:
MLSNTGGYSRHSHVLGFRKDAATLQCALCPALRAKGRCKAYQLETRLRAELAAQKERELRTTAMQLYSLQEEILQRGREQGVDTSEGDKQAVVEKIVGELKKEQSYVRWNLDVEVVERMTLLRTRPCRYSHQRDLLTVLKPRKGTAKLGSKHMEKAQGELGAAASGGAENRLSEEHRRIFEGLSPLQKCVVCLLWQRTFEIPQKVVCDVRRQVEVERGYDSDDQEDAAVVDAAIEEEERRVVTVTTCRLSIGSVDLSSLPSVAAYIARHPNEPIIRTETWEHFTVWDAKSKSRRSALLPSSLTEKQVDLSTAACAHEVMGAVVWALRTMDEERRLQSDPNERRQERSRQQRHTQGKSAAVVLRTLTLRRCSITAADALVAALRKYKLDTTLLALDVSDNRLMCLRFLFALRAHFAERLLRLSLANNPITRKPDYREQVRKSLPKLTSLDGVAIRRPPLRFPHPSLLSYTLAGGAATASATSTTVRPKEHSTMSDTELEQVMDAVSRFFYIWETRRVPWTAAELRHIRDQGGTRCRGRNKVSKRRRGEGTGLAITSLEDGEEEPCVPPEEDLDDDNFHHRYLHPYATFSLSVHEGLSFFASDIMRVDAEVEMDKNYTGMRLSSLDASELRVFDVSMKNSSRNLLLGRSVLHRHARGSLSCYTAYKCTLYPPSLSVCHHFPAAVVSASKIICAAVNAEPRKQQRQEKQNSHRKQSKGDTGNAHESKTGATVFFPNRTRKPTFYTVTIHGLMTWRAPSMKRCECVRAAYDRVMTLVENTVYGEDTVEGRRSAPLLIFNDQLHLRPAGRCDDATTVCHVTPTLEYVTRLVVEFGLEACVDGARLVRAVAERSTSDASTHAALTVLVFGSVESCESKGEEVGSPNVSASGTVHSTAVDHDDPTNGVEQTLPHFDIYSVLTSENWTVADNGCAVVECPPHRVTLADVDAAVAASNSRYTFSFSVEKGELGGT
Protein: Phosphoglycerate mutase 1 (EC 5.4.2.11) (EC 5.4.2.4) (BPG-dependent PGAM 1) (Phosphoglycerate mutase isozyme B) (PGAM-B) (P25113)
Organism: Rattus norvegicus (Rat)
Function: Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglyceratea crucial step in glycolysis, by using 2,3-bisphosphoglycerate. Also catalyzes the interconversion of (2R)-2,3-bisphosphoglycerate and (2R)-3-phospho-glyceroyl phosphate.
Interaction partners:
- Phosphoglycerate kinase 1
- Alpha-enolase
- Gamma-enolase
- Phosphoglycerate kinase
- Beta-enolase
- Phosphoglycerate mutase 2
- Glucose-6-phosphate isomerase
- Fructose-bisphosphate aldolase A
- Enolase 4
- D-3-phosphoglycerate dehydrogenase
Sequence:
MAAYKLVLIRHGESAWNLENRFSGWYDADLSPAGHEEAKRGGQALRDAGYEFDICFTSVQKRAIRTLWTVLDAIDQMWLPVVRTWRLNERHYGGLTGLNKAETAAKHGEAQVKIWRRSYDVPPPPMEPDHPFYSNISKDRRYADLTEDQLPSCESLKDTIARALPFWNEEIVPQIKEGKRVLIAAHGNSLRGIVKHLEGLSEEAIMELNLPTGIPIVYELDKNLKPIKPMQFLGDEETVRKAMEAVAAQGKVKK
Protein: Zinc finger and BTB domain-containing protein 17 (LP-1) (Polyomavirus late initiator promoter-binding protein) (Zinc finger protein 100) (Zfp-100) (Zinc finger protein 151) (Zinc finger protein Z13) (Q60821)
Organism: Mus musculus (Mouse)
Function: Transcription factor that can function as an activator or repressor depending on its binding partners, and by targeting negative regulators of cell cycle progression. Has been shown to bind to the promoters of adenovirus major late protein and cyclin D1 and activate transcription. Required for early embryonic development during gastrulation. Plays a critical role in early lymphocyte development, where it is essential to prevent apoptosis in lymphoid precursors, allowing them to survive in response to IL7 and undergo proper lineage commitment. Represses RB1 transcription; this repression can be blocked by interaction with ZBTB49 (By similarity).
Subcellular location: Nucleus {ECO:0000250}.
Interaction partners:
- Myc proto-oncogene protein
- Protein max
- Transcription factor Sp1
- U7 snRNA-associated Sm-like protein LSm11
- E3 ubiquitin-protein ligase HUWE1
- U7 snRNA-associated Sm-like protein LSm10
Sequence:
MDFPQHSQRVLEQLNQQRQLGLLCDCTFVVDGVDFKAHKAVLAACSEYFKMLFVDQKDVVHLDISNAAGLGQVLEFMYTAKLSLSPENVDDVLAVASFLQMQDIVTACHTLKSLAEPSSTTGESADASAVEGGDKRAKDEKAAATMLSRLDQARGSSSTGPGRELKEERGGQAESASSGAEQTEKADAPREPPPVELKPDPTSSMAAAEAEALSESSEQEMEVEPASKGEDGQEEEGAGPATVKEEGMHLDNGEPPEENEESAGTDSGQELGMEGQNLRSGTYGDRTESKAYGSIIHKCEDCGKEFTHTGNFKRHIRIHTGEKPFSCRECSKAFSDPAACKAHEKTHSPLKPYGCEECGKSYRLISLLNLHKKRHSGEARYRCGDCGKLFTTSGNLKRHQLVHSGQKPYQCDYCGRSFSDPTSKMRHLETHDTDKEHKCPHCDKKFNQVGNLKAHLKIHIADGPLKCRECGKQFTTSGNLKRHLRIHSGEKPYVCTHCQRQFADPGALQRHVRIHTGEKPCQCVICGKAFTQASSLIAHVRQHTGEKPYVCERCGKRFVQSSQLANHIRHHDNIRPHKCSVCSKAFVNVGDLSKHIIIHTGEKPYLCDKCGRGFNRVDNLRSHVKTVHQGKAGIKILEPEEGGEVSVVTVDDMVTLATEALAATAVTQLTVVPVGAAVTADETEVLKAEISKAVKQVQEEDPNTHILYACDSCGDKFLDANSLAQHVRIHTAQALVMFQTDADFYQQYGPGSTWPAGQMLQAGELVFRPRDGTEGQPTLAESPPTAPDCLPPAE
Protein: Complex I-49kD (NADH-ubiquinone oxidoreductase 49 kDa subunit) (Q9V4E0)
Organism: Drosophila melanogaster (Fruit fly)
Interaction partners:
- NADH-ubiquinone oxidoreductase chain 1
- NADH dehydrogenase 1 alpha subcomplex subunit 12
- NADH dehydrogenase 1 alpha subcomplex subunit 9, mitochondrial
- NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial
- Probable NADH dehydrogenase iron-sulfur protein 7
- Probable NADH dehydrogenase iron-sulfur protein 7
- NADH dehydrogenase iron-sulfur protein 3, mitochondrial
- NADH dehydrogenase iron-sulfur protein 4
- NADH dehydrogenase 1 alpha subcomplex subunit 6
- NADH-ubiquinone oxidoreductase chain 3
Sequence:
MANIMRRTLIPGLSHLRLRPQLVAAGSAALTSQETRRGAAKWYPDPEFMKQFSGPVMYPDEVTSLWTVPPWNSKVTPVEKSVRNLTLNFGPQHPAAHGVLRLVLELDGETVMRADPHIGLLHRGTEKLIEYKTYTQALPYFDRLDYVSMMCNEQCYSLAVEKLLNIDVPLRAKYIRTLFAEITRILNHIMAVGTHALDVGALTPFFWLFEEREKMMEFYERVSGARMHAAYIRPGGVSLDMPLGLMDDIYEFASKFAERLDEVEDVLTTNRIWVQRTEDIGIVTAEEALNYGFSGVMLRGSGIKWDLRKQQPYDAYNLVNFDVPIGTKGDCYDRYLCRVEEMRQSLRIIDQCLNQMPAGEIKTDDAKVAPPSRSEMKTSMEALIHHFKLFTQGYQVPPGATYTAIEAPKGEFGVYLISDGSSRPYRCKIKAPGFAHLAALEKIGKQHMLADVVAIIGTLDVVFGEIDR
Protein: Nitric oxide reductase FlRd-NAD(+) reductase (EC 1.18.1.-) (Flavorubredoxin reductase) (FlRd-reductase) (FlavoRb reductase) (P37596)
Organism: Escherichia coli (strain K12)
Function: One of at least two accessory proteins for anaerobic nitric oxide (NO) reductase. Reduces the rubredoxin moiety of NO reductase.
Subcellular location: Cytoplasm.
Interaction partners:
- Anaerobic nitric oxide reductase flavorubredoxin
- Nitrite reductase small subunit
- Formate dehydrogenase H
- Flavohemoprotein
- Periplasmic nitrate reductase
- Anaerobic nitric oxide reductase transcription regulator NorR
- 3-phenylpropionate/cinnamic acid dioxygenase ferredoxin subunit
- Cytochrome c-552
- Hydrogenase-2 operon protein HybE
Sequence:
MSNGIVIIGSGFAARQLVKNIRKQDATIPLTLIAADSMDEYNKPDLSHVISQGQRADDLTRQTAGEFAEQFNLHLFPQTWVTDIDAEARVVKSQNNQWQYDKLVLATGASAFVPPVPGRELMLTLNSQQEYRACETQLRDARRVLIVGGGLIGSELAMDFCRAGKAVTLIDNAASILASLMPPEVSSRLQHRLTEMGVHLLLKSQLQGLEKTDSGIQATLDRQRNIEVDAVIAATGLRPETALARRAGLTINRGVCVDSYLQTSNTDIYALGDCAEINGQVLPFLQPIQLSAMVLAKNLLGNNTPLKLPAMLVKIKTPELPLHLAGETQRQDLRWQINTERQGMVARGVDDADQLRAFVVSEDRMKEAFGLLKTLPM
Protein: CRAL/TRIO, N-terminus family protein, expressed (Q8S7R2)
Organism: Oryza sativa subsp. japonica (Rice)
Subcellular location: Cell membrane {ECO:0000256|ARBA:ARBA00004202}; Peripheral membrane protein {ECO:0000256|ARBA:ARBA00004202}. Golgi apparatus membrane {ECO:0000256|ARBA:ARBA00004395}; Peripheral membrane protein {ECO:0000256|ARBA:ARBA00004395}.
Interaction partners:
Sequence:
MTEVLSRPLEHRLSSATLDGHYEEKRKSNVEYSEDEKKAKIMSLKKKAMSSSQKLRHSMKKGRRSSKVMSISIADERDPEEVQAVDAFRQLLILEELLPSQHDDYHMMLRFLKARKFDVEKAKQMWADMLRWRKEFGADTILEDFEFEEAGKVAECYPQGYHGVDKEGRPVYIERLGQIDVNRLMQVTTMDRFIKNHVREFEKNFAVKFPACSIATKCHIDQSTTILDVQGVGMKQFSKAARDLIGQLQKIDGDNYPEVLGNKYQSKLLEVIDASELPEFFGGTCQCEGGCMKADKGPWKDDEVMKMVQSGVGWCGNLNLNHLEAEEKMMICEDDTMYTKKQESFKDEGRTLSRKISRARIEHPTLSPVCEELPPMMLPTPGSPYSCDVPMVEKAIDAICQSKGSRDENVAITKAIVNASNGSNPPLFGGVMALVMSIATMLRVSRNMPKKVLGATLGAQSTSKIQAQQLSKISMEAVSAAEYASSTKRLSDIEEKVIAILTKPAEMPADKEEMLKTAVSRVSALEEELAATKKALQETLERQEEIMAYIEKKKKKKSKRLFRW
Protein: Protein limb expression 1 homolog (Q8N485)
Organism: Homo sapiens (Human)
Interaction partners:
- Leucyl-cystinyl aminopeptidase
- Solute carrier organic anion transporter family member 1A2
- Pre-mRNA-splicing factor CWC25 homolog
- AFG2-interacting ribosome maturation factor
- Protein associated with UVRAG as autophagy enhancer
Sequence:
MDRTLESLRHIIAQVLPHRDPALVFKDLNVVSMLQEFWESKQQQKAAFPSEGVVVYESLPAPGPPFVSYVTLPGGSCFGNFQCCLSRAEARRDAAKVALINSLFNELPSRRITKEFIMESVQEAVASTSGTLDDADDPSTSVGAYHYMLESNMGKTMLEFQELMTIFQLLHWNGSLKALRETKCSRQEVISYYSQYSLDEKMRSHMALDWIMKERDSPGIVSQELRMALRQLEEARKAGQELRFYKEKKEILSLALTQICSDPDTSSPSDDQLSLTALCGYH
Protein: Protein stand still (P92189)
Organism: Drosophila melanogaster (Fruit fly)
Function: Essential in the female germline for proper survival, sex determination and differentiation. Participates in the transcriptional activation of Otu. Does not regulate the expression of Ovo.
Subcellular location: Nucleus {ECO:0000269|PubMed:10101125}. Note=Associates with decondensed chromatin, including sites of active transcription.
Interaction partners:
Sequence:
MSVNLDGSEEKMELKKHVPYILNGELYRIEKQVGDNVTVKCCYCPPDRIYRGSVRSTGNFHMHIKRRHSSLLGKLHEMKVAALEERRDRIMKNRRFAKSRKKAPVAVAATSTAAQSDSGVFVDMQAAVPSGNESHELKIKTVFQRHKQEQEGATRKLEDSTSDKANLPNIPKNLGIVVQNVSNISVETLPGGSTPASVSFLGRPVKPEQGSGPSFLADQPAAIDLSQVPPVQGESKSSGSLASSMEDVSMEYSRSQALSQSLSMAHFLEHPQRDVLQRLERSMAQISQELHCRNRIEHNRMLLEAAKFKFLNPNFQFEPNL
Protein: Molting protein mlt-10 (O76555)
Organism: Caenorhabditis elegans
Subcellular location: Membrane {ECO:0000255}; Multi-pass membrane protein {ECO:0000255}. Secreted {ECO:0000269|PubMed:20335506}. Note=Secreted from the hypodermis during molting. {ECO:0000269|PubMed:20335506}.
Interaction partners:
- Uncharacterized protein
- MAM domain-containing protein
- Papilin
- Protein qua-1
- Nuclear hormone receptor family member nhr-23
- Period protein homolog lin-42
Sequence:
MRNLNLILFTALAAVTYANVQPHDISQNGAVKDGNHLRIDLNETSSVELMDKWLSQAFSGLMAAVASKKIAKMPAEHQNIVQQCSKDAKDVREHAKCLVKLLDAEKSGKLGRKQYQKVVKSPETIVLPENPKMLTKKDLEKAENAGAAENNENLEWIGSFGTARAKRSYKVVHRDSYALRSTDDVDGMTKLAKSLTNTVRAMKNKTERAEPWVEAVGRIKKLGEEAKREKKNREVMKKRLKQMIDNTPAEFVDPRKPVALKQAEMEDENNEIAKLMRKKEADEIRVPLKFLRKAVKTALMLGGQNVTDFDQKTLKMVSPRMMSIVPEQEDESLFNLLSPSLFSLHDEGEGIEKLTSLPHLLKKLDNHGQNAWMDFIVEAAGVSDEVTKTEKVFREKKEKELRGTDGVPLYFTKENATKILGNEEKSKIEVFEDLDKSYSEEQKKKLNDDGFAFLTEKQMERLYGKESPYKHTKALKKFKRLRDDPEKYIEKDIRALAEAEKFRVARRADIVSSPFILTPLTFASAPLSNTFIVLSPLVLSPITLSPAVLGPIILSPWVFVPLILSPRVLSPLIVNPLVFSPIILSPLVLHPLILVPGVFNPIILSPLVLSPLILSPQVFTPLILSPFALNPLILTPMVGSPLILSPFVLSPIILSPQALFAVVLSPYALSPLVESKLIAAEVVLSPSWLS
Protein: Threonine--tRNA ligase, mitochondrial (EC 6.1.1.3) (Threonyl-tRNA synthetase) (ThrRS) (Threonyl-tRNA synthetase-like 1) (Q3UQ84)
Organism: Mus musculus (Mouse)
Function: Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction: threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr). Also edits incorrectly charged tRNA(Thr) via its editing domain.
Subcellular location: Mitochondrion matrix {ECO:0000250}.
Interaction partners:
- Bifunctional glutamate/proline--tRNA ligase
- Probable leucine--tRNA ligase, mitochondrial
- Leucine--tRNA ligase, cytoplasmic
- Threonine--tRNA ligase 1, cytoplasmic
- Tyrosine--tRNA ligase, cytoplasmic
- Threonine--tRNA ligase 2, cytoplasmic
- Valine--tRNA ligase
- Alanine--tRNA ligase, cytoplasmic
- Valine--tRNA ligase, mitochondrial
- Isoleucine--tRNA ligase, mitochondrial
Sequence:
MGLCLRWRRLGFPLPEFRRCELHTVREASAPTPPHWLAERFGLFEELWTAHVKKLASMTQKKARAIKISLPEGQKVDAVAWNTTPYQLAHQISVTLADTAVAAEVNGELYDLDRPLETDCHLRFLTFDSPEGKAVFWHSSAHVLGAAAEQQLGAVLCRGPSTESGFYHDFFLGKERTVRSAELPILERICQELIAAAQPFRRLEASRDQLRQLFKDNHFKLHLIEEKVTGPTATVYGCGMSVDLCRGPHLRHTGQIGALKLLTNSSALWRSLGAPETLQRVSGISFPKVELLRNWEARREAAELRDHRRIGKEQELFFFHELSPGSCFFLPRGTRVYNALVAFIRAEYARRGFSEVKTPTLFSTKLWEQSGHWEHYRADMFSLKPPGTDGVDNSQSGHPARCPKDTLALKPMNCPAHCLMFAHRPRSWRELPVRLADFGALHRAEASGSLGGLTRLWRFQQDDAHIFCAPHQLEAEIQGCLDFLRCVYSVLGFSFHLALSTRPPGFLGEPRLWDQAEQVLQQALEKFGEPWDLNPGDGAFYGPKIDVHLHDALGRPHQCGTIQLDFQLPLRFDLQYKGPAGTPECPVLIHRAVLGSVERLLGVLAESCGGKWPLWLSPLQVVVIPVRTEQEEYARQVQQCLQAAGLVSDLDADSGLTLSRRVRRAQLAHYNFQFVVGQREQSQRTVNVRTRDNRQLGERDLAESVQRLLELQNARVPNAEEVF
Protein: Allantoate deiminase (EC 3.5.3.9) (Allantoate amidohydrolase) (AtAAH) (O49434)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Involved in the catabolism of purine nucleotides. Can use allantoate as substrate, but not Nalpha-carbamoyl-L-Asp, Nalpha-carbamoyl-L-Ala or Nalpha-carbamoyl-Gly. The sequential activity of AAH, UGLYAH and UAH allows a complete purine breakdown without the intermediate generation of urea. Involved in the regulation of seed maturation and seed dormancy.
Subcellular location: Endoplasmic reticulum {ECO:0000269|PubMed:18065556}.
Interaction partners:
- Allantoinase
- (S)-ureidoglycine aminohydrolase (AtUGLYAH)
- Uricase
- Xanthine dehydrogenase 1
- AT4g00920 protein
- Wall-associated receptor kinase-like protein
- AT4g19390/T5K18_170
- NC domain-containing protein-like protein
- Ureide permease 1
- AT3g56990/F24I3_70
Sequence:
MAVPHPSSSSSRSHPFLSHVYHTSFHHHHHHNHPSLVLFWCLVFSLLSPLALSSSSSSSSSSSDSSSSSSSHISLGIGETEGTKHDLHQAILRDEAVARLHELGQVSDAATHLERTFMSPASIRAIPLIRGWMEDAGLSTWVDYMGNVHGRVEPKNGSSQALLIGSHMDTVIDAGKYDGSLGIISAISALKVLKIDGRLGELKRPVEVIAFSDEEGVRFQSTFLGSAALAGIMPVSRLEVTDKSGISVQDALKENSIDITDENLMQLKYDPASVWGYVEVHIEQGPVLEWVGYPLGVVKGIAGQTRLKVTVKGSQGHAGTVPMSMRQDPMTGAAELIVLLESVCKNPKDYLSCNVQCNEDTVESLANSLVCTVGEISTWPSASNVIPGQVTFTVDLRTIDDVGRKAILHDLSTRMYQICDKRSLLCSIERKHDADAVMSDPQLSLQLKSAAQSALKKMTGEVQDEVPVLMSGAGHDAMAMAHLTKVGMLFVRCRGGISHSPAEHVLDDDVGAAGLAILEFLESQM