wanglab/gogpt-training-data huggingface dataset:
Protein: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (Q9LY49)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Interaction partners:
- Transcription initiation factor IIF subunit alpha
- Phosphatidate phosphatase PAH1
- Phosphatidate phosphatase PAH2
Sequence:
MAELTQADVVYSPRSFQVWKTLVNWLAFFYQIFLQILRAVGYHPLLSSSAKASADGFKPLPAIELLDRASESPTTVEIAATTTSDSCSDGARSRFQRLKVVLDLDETLVCAYETSSLPAALRNQAIEAGLKWFELECLSTDKEYDGKPKINYVTVFERPGLHEFLEQLSEFADLILFTAGLEGYARPLVDRIDTRKVLTNRLYRPSTVSTQYRDHVKDLLSTSKNMCRTVIVDNNPFSFLLQPSNGIPCIAFSAGQPNDTQLLDVILPLLKQLSEEDDVRPTLYDRFRMPEWFEKQGIPPSCWKP
Protein: Glucose-6-phosphate isomerase (GPI) (EC 5.3.1.9) (Phosphoglucose isomerase) (PGI) (Phosphohexose isomerase) (PHI) (P12709)
Organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Function: In the cytoplasm, catalyzes the conversion of glucose-6-phosphate to fructose-6-phosphate, the second step in glycolysis, and the reverse reaction during gluconeogenesis.
Subcellular location: Cytoplasm, cytosol {ECO:0000250|UniProtKB:P78917}.
Interaction partners:
- Glucose-6-phosphate 1-dehydrogenase
- Triosephosphate isomerase
- ATP-dependent 6-phosphofructokinase subunit alpha
- Fructose-bisphosphate aldolase
- Pyruvate kinase 1
- Phosphoglycerate kinase
- Mannose-6-phosphate isomerase
- Transketolase 1
- Hexokinase-2
- Transketolase 2
Sequence:
MSNNSFTNFKLATELPAWSKLQKIYESQGKTLSVKQEFQKDAKRFEKLNKTFTNYDGSKILFDYSKNLVNDEIIAALIELAKEANVTGLRDAMFKGEHINSTEDRAVYHVALRNRANKPMYVDGVNVAPEVDSVLKHMKEFSEQVRSGEWKGYTGKKITDVVNIGIGGSDLGPVMVTEALKHYAGVLDVHFVSNIDGTHIAETLKVVDPETTLFLIASKTFTTAETITNANTAKNWFLSKTGNDPSHIAKHFAALSTNETEVAKFGIDTKNMFGFESWVGGRYSVWSAIGLSVALYIGYDNFEAFLKGAEAVDNHFTQTPLEDNIPLLGGLLSVWYNNFFGAQTHLVAPFDQYLHRFPAYLQQLSMESNGKSVTRGNVFTDYSTGSILFGEPATNAQHSFFQLVHQGTKLIPSDFILAAQSHNPIENKLHQKMLASNFFAQAEALMVGKDEEQVKAEGATGGLVPHKVFSGNRPTTSILAQKITPATLGALIAYYEHVTFTEGAIWNINSFDQWGVELGKVLAKVIGKELDNSSTISTHDASTNGLINQFKEWM
Protein: LRR and NB-ARC domains-containing disease resistance protein (Q2V4G0)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Interaction partners:
Sequence:
MGSCFSLQVSDQTLNRIFNCLIGKSYIRTLEKNLRALQREMEDLRAIQHEVQNKVARDEARHQRRLEAVQVWLDRVNSVDIECKDLLSVTPVELQKLCLCGLCSKYVCSSYKYGKKVFLLLEEVKKLNSEGNFDEVSQPPPRSEVEERPTQPTIGQEDMLEKAWNRLMEDGVGIMGLHGMGGVGKTTLFKKIHNKFAEIGGTFDIVIWIVVSKGVMISKLQEDIAEKLHLCDDLWKNKNESDKATDIHRVLKGKRFVLMLDDIWEKVDLEAIGIPYPSEVNKCKVAFTTRSREVCGEMGDHKPMQVNCLEPEDAWELFKNKVGDNTLSSDPVIVELAREVAQKCRGLPLALNVIGETMSSKTMVQEWEHAIHVFNTSAAEFSDMQNKILPILKYSYDSLGDEHIKSCFLYCALFPEDGEIYNEKLIDYWICEGFIGEDQVIKRARNKGYAMLGTLTRANLLTKVGTYYCVMHDVVREMALWIASDFGKQKENFVVQAGVGLHEIPKVKDWGAVRKMSLMDNDIEEITCESKCSELTTLFLQSNKLKNLPGAFIRYMQKLVVLDLSYNRDFNKLPEQISGLVSLQFLDLSNTSIEHMPIGLKELKKLTFLDLTYTDRLCSISGISRLLSLRLLRLLGSKVHGDASVLKELQQLQNLQELAITVSAELISLDQRLAKLISNLCIEGFLQKPFDLSFLASMENLSSLRVENSYFSEIKCRESETESSYLRINPKIPCFTNLSRLEIMKCHSMKDLTWILFAPNLVVLLIEDSREVGEIINKEKATNLTSITPFLKLEWLILYNLPKLESIYWSPLPFPVLLTMDVSNCPKLRKLPLNATSVSKVEEFEIHMYPPPEQENELEWEDDDTKNRFLPSIKPVIISFNLLCLSYLYFLLMFLSRLA
Protein: Nucleobase-ascorbate transporter 8 (AtNAT8) (Q8VZQ5)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Subcellular location: Cell membrane {ECO:0000269|PubMed:16982705}; Multi-pass membrane protein {ECO:0000269|PubMed:16982705}.
Interaction partners:
- Purine-uracil permease NCS1
- Cytoplasmic tRNA 2-thiolation protein 2
- Polyketide cyclase / dehydrase and lipid transport protein
- Amino acid transporter AVT6D
- Protein LOW PHOTOSYNTHETIC EFFICIENCY 1
- Probable sodium/metabolite cotransporter BASS6, chloroplastic
- Uridine 5'-monophosphate synthase
- Putative actin-5
Sequence:
MAGDGVENAKPPQKQEDLQPHPVKDQLYGITYCLTSPPPWPETILLGFQHYLVMLGTTVLIPTMLVSKIDARNEDKVKLIQTLLFVSGINTLFQSFFGTRLPAVIGASYSYVPTTMSIVLAARYNDIMDPQKRFEQIMRGIQGALIIASFLHILVGFSGLWRNVTRFLSPLSAVPLVAFSGFGLYEQGFPMLAKCIEIGLPEIILLVIFSQYIPHLMQGETCSNFFHRFAVIFSVVIVWLYAYILTIGGAYSNTEINTQISCRTDRAGIISASPWIRVPHPIQWGGAPTFNAGDIFAMMAASFVSLVESTGTYIAVSRYASATPIPPSVLSRGIGWQGFGILLCGLFGAGNATSVSVENAGLLAVTRVGSRRVIQVAAGFMIFFSILGKFGAIFASIPAPIVAALYCLFFSYVGAGGLSLIQFCNLNSFRTKFILGFSIFMGLSIPQYFYQYTTLETYGPVRTSATWFNNIINVPFSSKAFVSGILAFFLDTTLPPKDKTTKKDRGLVWWKRFKSFQSDNRSEEFYSLPLNLSKYFPSH
Protein: Probable proteasome subunit beta type-5 (EC 3.4.25.1) (Macropain subunit pts1) (Multicatalytic endopeptidase complex subunit pts1) (Proteasome component pts1) (P30655)
Organism: Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Function: The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity.
Subcellular location: Cytoplasm {ECO:0000255|PROSITE-ProRule:PRU00809, ECO:0000269|PubMed:16823372}. Nucleus {ECO:0000269|PubMed:16823372}.
Interaction partners:
- Probable proteasome subunit alpha type-5
- Probable proteasome subunit beta type-3
- Probable proteasome subunit alpha type-3
- Probable proteasome subunit beta type-7
- Probable proteasome subunit beta type-4
- Probable proteasome subunit beta type-2
- Probable proteasome subunit beta type-1
- Probable proteasome subunit alpha type-1
- Probable proteasome subunit alpha type-6
- Probable proteasome subunit alpha type-7
Sequence:
MNSIVSKYTQSTNNDDPKKIIEEEGFTNRFDVVPVPQSSLYLRNLTDETKNKHCLIKMNHGTTTLAFRYQHGIVVCVDSRASAGPLIASQTVKKVIEINPYLLGTLAGGAADCQFWETVLGMECRLHQLRNKELISVSAASKILSNITYSYKGYGLSMGTMLAGTGKGGTALYYIDSDGTRLKGDLFSVGSGSTFAYGVLDSGYRWDLSKQEALYLAQRSIVAATHRDAYSGGSVNLYHIDENGWVFHGNFDVDSLIWEAKDNENSFAHIPR
Protein: Trafficking protein particle complex subunit 10 (Shal Interactor of Di-Leucine Motif) (Trafficking protein particle complex subunit TMEM1) (Transport protein particle subunit TMEM1) (TRAPP subunit TMEM1) (Q9VFB7)
Organism: Drosophila melanogaster (Fruit fly)
Function: May play a role in vesicular transport from endoplasmic reticulum to Golgi (By similarity). Has a role in one of the several mechanisms underlying dendritic localization of Shal channels.
Subcellular location: Golgi apparatus, cis-Golgi network {ECO:0000250}. Cell projection, dendrite {ECO:0000269|PubMed:20550966}. Perikaryon {ECO:0000269|PubMed:20550966}.
Interaction partners:
- Trafficking protein particle complex subunit 2-like protein
- Trafficking protein particle complex subunit
- Trafficking protein particle complex subunit 5
- Protein brunelleschi
- Trafficking protein particle complex subunit
- Probable trafficking protein particle complex subunit 2
- Trafficking protein particle complex subunit
- Trafficking protein particle complex subunit 6B
- FI18195p1
- Probable trafficking protein particle complex subunit 13 homolog
Sequence:
MQIKPIITYSGSCPLFRSLESQILNAIPLDTCEWRRTFQRPTKHVRLEAQAQQFNVAALEKYKQGDWSILEHPILHIFVTECNDVDTYKATIREAIDIWLKTLTSYGVSDWMILLVETLDMRKTKNFMPRTTVLDKIRLDFGTKNDDRCISVLNPAKFEQKSTESFRCLVQRIRFLMLTSYNRNIVKYEELIRSKREKRNIEGWDFRQYFFMQEDLALIFEKLELPTEALIQYDELDAMFSQFITHTGLNEKQQWLNHFRKPLDAFHGICLTRADKFEMRNKIRDEGVSLLEFRNYLFERQAYLLLTCNDIPEIAKRLLNFLFSTLREVELIKLECQEGALCCWEFVCALEVLQLCEQAMEPNELTCFQHCAPIWNLAKDKLYELGKLCGLLPGCTPTSEQLHIVVQLSSGIGDAPSEQHQFLQATPQLRDRSPNRKPKKSGAEQLKEALGSNQAFQKLYLELAELAISTYKHVTRLRSARLVGLDLGNFYCALNEPHKAVGFFTDLLRELKAENWHMLSSQTLLELANCYRKMGDSLAYTKTCSSISCCAELETLVRTFYFDEFLKSLKTLKTTLSAQPSIENANYCVLEDHFRILDIEVVNQKPIIQDDYILVQLKVESLYPRGVVAENVKLCYELEASSLELAMENVSLTASPSTVKAKDTSSRLKVSLQLVYKQDNRLHSAAVACDLPKSKQPVRRTSSTKRKLSPSVQADFTNFVQAENIALQPGVNLIEMKAKATRVGCWQFKQLCISMSSLEFLSEQLPFMPATFEISTKPASATLEFKTLIAGIVQPISLNVSGGSFIFPPDAKITLRCSKNLRIRQARNTDDEAAYNDDQSFESTLQVPLVQFKSFEERRIPLEVLTDMPGRKVSKHHEHHIALNCPWSRTELPIAVDFQPAMEATCRLHTCGTQKFLQVIMKGMEAHLLLQHAQVKCDVPGVQLLDLNPESQQPIEIYKSLTVTYLYEIQVEPLKTEHELPVVKVHFVIKYASLSQPDVWRTYGCAFDLVDYTTLFKLQAQLEPNELCRLRTVCNMNLKITKVHENPYTDLMYEVLNDQNLWAVCGRSAGVVSMKDVDSHSISLDVMPLSTGFLPMPSIRLSKYTAGGKSKTDGHSKVHPFPPGQVYNSTKSMQIHVIASVAGDQ
Protein: ubiquitinyl hydrolase 1 (EC 3.4.19.12) (F1Q6K1)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Interaction partners:
Sequence:
MMETEEEQHMTTLLCMGFPDPVAIRKALRLAKNDINEAVALLTNESPGLGYGYEPMESGPSPGSGDGENSGRTVTGGFDPPPAYHDVVESERSNDENGNCSGNSMEFPTTNLYELESRVFTDHWSIPYKREESLGKCLIASTCLARHGLADADENCKRFIDRCMPEAFKKLLTSSAVHKWGTEIHEGIYNMLMLLVDLVAERVKQDPIPIGLMGVLTMAFNPDNEYHFKNRMKACQRNWAEVFGEDSMFAVSPSSSYQKEPHGWLVDLVNRFGEMGGFTAIQCKLNQEEIEIGCVSALVQPLGVCAEYLNSSLVQPMLDPVIHKMITYVQNLEEKDLKDKRLVSIPELLSAIKLLCMRFQRELVNVVDDLRLDILLRMLKTPHFSAKMNSLKEVTKLIEESTVSKTVKNAIDTDRLLDWLVENSVLSIALEGNIDQAQYCDRIKGIIELLGSKLSLDELSKIWKIQAGQSSTVIENIHTIIAAAAVKFNFDQLSHLFVLIQKSWEVESDRVRQKLLSLIGRIGREARSEATTGKVLEVLWELAHLPTLPTSLVQQALEEHLTILSDAYAVKETIKRNYIIKCIEDIKKMQIQEDSKSPSETQVSFLTGTWGKKKPSSLAKSSQQTNPQTVWVVPALRQLHEITRSFIKQTYQKQDKSIIQDLKKNFEIVKLITGSLVSCHRLAVSVAGSNGLSGSTLVDGRYSYQEYLEGHLKFLAFFLQEASLYLVWNRAKEIWECLVSGMDVCELDREMCFEWFTKGQHDLESDVQQQLFKEKILKLEPYEITMNGFNLFKTFFENVNLSDHRLKRQGTQLCVERLDLAGMDFIWRIAMESPDEDIANEAIQLIITYSYINLNPKMKKDSVSLHKKFIADCYKRLEAASSALGGPTLTHAVTRATKMLTATAMPTVATSVQSPSRSSKLVIIERLLLLAERYVITIEDLYSVPRTILPHGASFHGHPVTLHITYESTKDTFTLEAHSNETIGSIRWKIADQLSCPVDNVQIFANDSMLTMNRDQKLLNQLGFSDEQSLTVKSSGTGTPSGSSADSSASASSSSSGVFNSAYALEQEKSLPGVVMALVCNVFEMLYQLANLEEPRITLRVRKLLLLIPTDPEVQDALDNFVPKESSVWSHQKTLFTLGSGSQASKSPSLSSKQQHQQSAASILESLFRSSAPGMSTFRVLYNLEVLSSKLMPTSDDEMAKTSVKSFCENFLKAGGLSLVVNVMQRDSIPSEVDYETRQGVYSICLQLARFLLVGQAMPSILDEELSKDDTLSSRPFRNAGRQSGRQLSVCGTPEKSSYRQVSVSDRSSIRVEEIIPAARVAIQTMEVGDFTSTVACFMRLTWAAAAGRLDLVGSSQPIRETTNSLLPLGVRSRVSSTGSNCSSSSEGEVTTLQAGICVKQLFVSIKDTIIAREALSLLVTCLQLRSQQLCSFYSLLSVNDFIIDILLGSPSGEIRRVACDQLYTLSQSDTSAYPDLQKPNLFLLKVVLTAQLPLWSPTSIMRGVNQRLLSQCTEYFDLRCQLLDDLTTSEMEQLQIGPAAMLEDEISWLDNFEPTWTTELETSEADNILLAGHLRLIKTLLSLCGTEKEQFGPSLIQQLLDDFLFRASRIILNSDSSSSTTASIHDFHPKCSTVSSRLAAYEVLVMLADSSLTNLQLITKELLSMHHQSDPSLSKEFDYLPPVDSRSISGFVGLKNGGATCYMNAVFQQLYMQPGLPEGVLSIEDDTENPEESVFCQVQSLFGHLMESKLQYYVPENFWKIFKMWNKELYVREQQDAYEFFTSLVDQLDEHLKKIGREQIFKNTFQGIFSDQKICKDCPHRYEREETFMALNLGVTSCQSLEISLDQFVRGEVLDGSNAYYCEKCKEKRTTVKRTCIKSLPSVLVIHLMRFGFDWESGRSIKYDEQIRFPWVLNMEPYTVSGMARQDSSADHGENGRGGEAGSGGSPRKKVTISENYELVGVVVHSGQAHAGHYYSFIKDRRGSARGRWYKFNDNVVEEFDMNDETLEYECFGGEYRPKVYDQSNPYPDVRRRYWNAYMLFYQRISDQNSPVLPKKSRVSIMRQEAEDLSLSAPSSPEISPQSSPRPPRANNDRLTLLTRLVKKGEKKGLFVEKMPARIFQMVRDENLKFMKNRDVYNSDYFSFTLSLASVNATKLKHASYQAMAKTSLQLAVQFLLHTYLRTKKKLRVDTEEWIATVEVLLSKSSEACQWMVQYLVAPEGREIIKICLLECSVREVRVVVATILEKTLESALYFQDAGLDCLLDMLLSLLDKDVPDNCKNCSQYFSLFSNFAQRGCGPCQLLLKHSAYRRMLVFLLGPNRQNNQHRRWSSAQAREFLHLHNTLALMVLHTDLTSQRTEAQGVFKQASSGLVAPSSVLMPLHPDINTLLFKADGQAYLMEVMFAMRELSGPLSFLIEMITYSSFCNEPFSLGVLQLLKNHLETAPPHELKNVFQMLLEILMLEDPLQSQRLKFAFESEKGLLALMHQSNNVDSSRCYQCVKFLVTLAQKCSPAKDYFKELSGHWSWAVQWLQKKMSEHYWTPQSNVSNETSTAKTFQRTISAQDTLAYATALLNEKDQSGSSNGSDGSPANENSDRSLRQGSESPMMLGDSRSDLEDVDP
Protein: Acyl-CoA-binding protein homolog 3 (ACBP-3) (Q20507)
Organism: Caenorhabditis elegans
Function: Binds medium- and long-chain acyl-CoA esters with very high affinity and may function as an intracellular carrier of acyl-CoA esters.
Interaction partners:
- ACB domain-containing protein
- Fungal lipase-like domain-containing protein
- Acyl-coenzyme A oxidase acox-3
- Acyl-coenzyme A oxidase acox-1.3
- Uncharacterized protein EEED8.3
- ACB domain-containing protein
- Enoyl-CoA Hydratase
- Acyl-coenzyme A oxidase acox-1.2
Sequence:
MSLQEKFDAAVEIIQKLPKTGPVATSNDQKLTFYSLFKQASIGDVNTDRPGIFSIIERKKWDSWKELEGVSQDEAKERYIKALNDMFDKIAEELDVAAWLEQIDPVIKTNLALIGK
Protein: S-norcoclaurine synthase 2 (PsNCS2) (EC 3.5.99.14) (Q4QTJ1)
Organism: Papaver somniferum (Opium poppy)
Function: Involved in the biosynthesis of (S)-coclaurine, the common precursor of all benzylisoquinoline alkaloids such as morphine, sanguinarine, codeine or papaverine. Condenses dopamine and 4-hydroxyphenylacetaldehyde.
Subcellular location: Endoplasmic reticulum membrane {ECO:0000269|PubMed:21037103}; Single-pass membrane protein {ECO:0000255}. Vacuole membrane {ECO:0000269|PubMed:21037103}; Single-pass membrane protein {ECO:0000255}. Note=Initially localized to the endoplasmic reticulum but subsequently sorted to the vacuole. {ECO:0000269|PubMed:21037103}.
Interaction partners:
Sequence:
MSKLITTEPLKSMAEVISNYVIQRESFSARNILNKNSLVKKEIRYDLEVPTSADSIWSVYSCPDIPRLLRDVLLPGVFQKLDVIEGNGGVGTVLDIVFPPGAVPRSYKEKFVNINHEKRLKEVIMIEGGYLDMGCTFYMDRIHIFEKTPNSCVIESSIIYEVKEEYAGKMAKLITTEPLESMAEVISGYVLKKRLQVFGFEIKPKLRFNLLLCLIICLVIAGGMFVAGVPL
Protein: Small ribosomal subunit protein uS3z (40S ribosomal protein S3-1) (Q9SIP7)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Interaction partners:
- Small ribosomal subunit protein uS14z/uS14y/uS14x
- Small ribosomal subunit protein eS28x
- Small ribosomal subunit protein eS26y
- Small ribosomal subunit protein eS26z
- Small ribosomal subunit protein eS1z
- Small ribosomal subunit protein eS30z/eS30y/eS30x
- Small ribosomal subunit protein eS6y
- Small ribosomal subunit protein uS5z
- Small ribosomal subunit protein eS26x
- Small ribosomal subunit protein eS24y
Sequence:
MATQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSLVQKRFKFPVDSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDAAVRHVLLRQGVLGIKVKIMLDWDPTGKSGPKTPLPDVVIIHAPKDDVVYSAPAQAAAPVTLVQEAPLTTVDYPEMIPPVA
Protein: Fibronectin (B0S602)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Interaction partners:
- Integrin alpha-5 precursor
- Syndecan 4.
- CD44 antigen
- Integrin alpha-4
- Integrin beta
- Integrin beta
- Integrin beta
- Integrin beta
- Integrin beta
- Integrin beta
Sequence:
MFGGPLGTALAVALLACAVQCMPKGTGKHKRQAQEHSVSSVSQDGCVMDGQFYGAGEKWERIYLGSTLLCTCHGVSKIECKSKPDAEETCYDKVNSRSYRVGETYERPKDGMIWDCTCIGSARGKISCTIANRCHEGGHSYKIGDTWQRPHDTGDYMLECVCLGNGKGEWTCKPVAERCYDNTAGTSYMVGETWEKPYQGWMIVDCTCLGEGSGRITCTSRNRCNDQDTRTSYRIGDTWSKTDSRGHVLQCLCTGNGRGEWKCERHASLHTTSLGTGSRVVTNVQPAVYHPQGVPEHPVEGSCLTEAGVSYAPGMRWSKAQGSKQMLCTCLGNGVSCEESESQSQVYGGTSGGEPCAFPFVFMGKTFYSCTSEGRNDGQLWCSTSSDFEKDYKYSFCTSNNVVVTTRGGNSNGALCQFPFLYNGRNYTDCTADGRRDGMKWCGTTYNFDKEQRFGFCPMAAHEEVCTTNEGVMYRVGDQWDRRHDVLGHMMRCTCVGNGRGEWSCIAYSQLKDQCIVDNLTYEVNQTFTKRHDEGYTMNCTCFGQGRGRWKCDAIDQCQEPETRVFYQIGESWDKLIQGIHYRCYCYGNGIGELSCEPQHSISGGHRPVQVIISEAGNQPNSHPIQWNAPASAHITQYILKWRPKNTHIQWMEVTIPGHVNSYTIAGLKPGVTYEGQLISILRFGRRETTRFDFSTVHGSLETSEGETTQPPRMVDTSESVTEITSSSFVISWVSASDTVSGFRVEYELSEEGGQTGQPMILDLPHSATSVNISELLPGRKYTVNVYEVTGEGEPNLILTTSQTTAPDAPSDHEVEDVADTSIRISWSKPLAPITGYRVVYTPSEEGSSGSVELNLPEHSTSLTLGDLRPGVLYNISIFSVEENQESEPVFVQVTTAGEPLAEEVPSPTDLQFYEVSDSKITITWTSPSSEVSGYRVSVGEVGPDGLIEKEVPYPVTQNAYAEITHLQPGTLYRFFIFSLKSGEESEPLVGEQATKPDPPTDIYFSNITEDSAVIVWLPPTAQITGYRLFLTVEGSNPKQLRIPGRLSQYTLLNLQPDTEYSATLHAERGNVLSEGSIATFATTPPMGNAPYFSTDVTDTSIIVSWSPLPKIGYKLTVRPSQGGEAPRDVTSELGSVLISGLTPGVEYTYSVQPVISGQEHGNPITRRVVTPLSPPTDLNLESNPNTGKLTVQWNDANIPDITGYRVTCTPTKGQQGNSLEEFVKAGQNSCTLENLSPGVEYNVSVFTVKDDMESVPVFTTVTPDVPKITDLSFINVTDSTIGLSWSPLNSTAVTGYRITVLAAGDSVPIFVEFVEPTTGFYTVHGLEPGIDYDITVTTVTENGESEPITITQQTAVPAPYGLSFGEVTADTMLVTWKAPQVPKSSDINQYIIRYHPVDEDDETTERTVEGSENFVVLRHLVPNTEYLVSVICVYEGREGSPAIGTQRTVFDAPVGLQFSDVGTTSFTVRWQAPRAIISGYRIRYQMTSGGRAKEERLPPSRSHFTLTGLTPETEYSISVYAVSGSRDSLPLTGTQSTISDAPTDLEVISSTPTSITVRWDAPSVTVRYYRITHGESGGSDAPLEFMVPGSQSTATIEDLRPGTDYTITVYAVTGRGDSPASSTPIHVKHRTDIDSPSQMEVTDVKDNTITVRWTPAAGPISRYRVNATPLTGEGPVLHAETTSDHTEITFSGLMPAVEYSIKVYALGQDGESLPLVENVVTTVDKPKDLSFTDVESSSMRISWDSPDGVVSSYRVLYYSPEEGERELFPAPHGDDESAVLHGLRPGTEYTVKVIALHDQSPSTALVGTQTTGIPGPTRLQFSQVGPTSFTVSWSSSDASLTGYRVAVSPKSKSGPTKEENITPDSTEFHATGLMPGTDYEVEVYGVKNSLTSPRVKGEITTPDNISPPRRVRISNVKDSSITLTWRSKTEAISGFLVEATPTMGGHNPIQRTIEPDSRTYTIAGLEPGTNYKINIYTLNGNSRSEPFTLTATTAKPVISPPTNLHFTSLASTSISFTWEPPRSTITGYYVTYEEAGGIPKELTPRPQAARTFASISGLIPGTEYIIKIVALNGAQRSTPLIGKARTQLEIEQLPPQLPNPSRPHLEVLDVPEDNDNFNNHVHVLGPNRHNTLGQQGQHIYTEYQSFNLGNNGQQPHHPNHGEPLVYIPLPGADGQRVPVVKVNEGQEAGFPFGGLFNETNLPQESQTQTTIVWQPVPHTSEYVVWCDPITEINEKSFQMRLPGTSTSATLIGLTSGASYNVLVESVNGDQKQKVLQDVVTVGNSVPGAGVIPTGRDVCYDSFTATYHEVNTEWERMSETGFKLWCKCLGLGSGHFRCDSSKWCHDSGHNYRIGEKWDRRAENGHMMSCTCLGNGKGEFKCEPHESTCYDEGKLYQVGNQWQKEYLGAICTCTCYGGQQGWRCENCRRPGAEVDADLIQPPVRTDAFDRYRENALRKLNIQCPIECLRPDLLADAHSPHD
Protein: Gamma-aminobutyric acid receptor subunit rho-2 (GABAAR subunit rho-2) (GABA(A) receptor subunit rho-2) (GABA(C) receptor) (P47742)
Organism: Rattus norvegicus (Rat)
Function: GABA, the major inhibitory neurotransmitter in the vertebrate brain, mediates neuronal inhibition by binding to the GABA/benzodiazepine receptor and opening an integral chloride channel. Rho-2 GABA receptor could play a role in retinal neurotransmission.
Subcellular location: Postsynaptic cell membrane {ECO:0000250|UniProtKB:P56476}; Multi-pass membrane protein {ECO:0000255}. Cell membrane {ECO:0000250|UniProtKB:P56476}; Multi-pass membrane protein {ECO:0000255}.
Interaction partners:
- Gamma-aminobutyric acid receptor subunit rho-1
- Gamma-aminobutyric acid receptor subunit rho-3
- Gamma-aminobutyric acid receptor subunit gamma-2
- Gamma-aminobutyric acid receptor subunit gamma-3
- Gamma-aminobutyric acid receptor subunit gamma-1
- Gamma-aminobutyric acid receptor subunit alpha-5
- Gamma-aminobutyric acid receptor subunit alpha-4
- Gamma-aminobutyric acid receptor subunit alpha-1
- Gamma-aminobutyric acid receptor subunit alpha-2
- Gamma-aminobutyric acid receptor subunit alpha-3
Sequence:
MPYFMRLALFLFCLMALVESRKPRRKRWTGHLETSKPSHLYKKNLDVTKIRTGKPRPLLRVEDHDFTMRPAFGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWRDERLAFPSSSNRSMTFDGRLVKKIWVPDVFFVHSKRSFTHDTTTDNIMLRVFPDGHVLYSMRITVTAMCNMDFSHFPLDSQTCSLELESYAYTDEDLMLYWKNGDESLKTDEKISLSQFLIQKFHTTSRLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDHRAVPARVSLGIMTVLTMSTIITGVNASMPRVSYIRAVDIYLWVSFVFVFLSVLEYAAVNYLTTVQEQKERKLRDKFPCTCGMLHSRTMTLDGSYSESEANSLAGYPRSHILPEEERQDKIVVHLALNSELTSSRKKGLLKGQMGLYIFQNTHAIDKYSRLIFPAFYIVFNLIYWSVFS
Protein: Small ribosomal subunit protein uS11c (30S ribosomal protein S11, chloroplastic) (P0C462)
Organism: Oryza sativa (Rice)
Subcellular location: Plastid, chloroplast.
Interaction partners:
Sequence:
MTKAIPKIGSRRKVRIGLRRNARFSLRKSARRITKGVIHVQASFNNTIITVTDPQGRVVFWSSAGTCGFKSSRKASPYAGQRTAVDAIRTVGLQRAEVMVKGAGSGRDAALRAIAKSGVRLSCIRDVTPMPHNGCRPPKKRRL
Protein: Protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF),-interacting protein (liprin), alpha 4 (A0A087WPM2)
Organism: Mus musculus (Mouse)
Interaction partners:
Sequence:
MCEVMPTINEGDPLGPPHGADAEANFEQLMVNMLDEREKLLESLRESQETLVATQSRLQDALHERDQLQRHLNSALPQEFATLTRELSMCREQLLEREEEISELKAERNNTRLLLEHLECLVSRHERSLRMTVVKRQAQSPSGVSSEVEVLKALKSLFEHHKALDEKVRERLRAALERVTTLEEQLAGAHQQVSALQQGAGIRDGVAEEEGTVDLGPKRLWKDDTGRVEELQGLLEKQNYELSQARERLVTLSATVTELEEDLGTARRDLIKSEELSSKHQRDLREALAQKEDMEERITTLEKRYLAAQREATSIHDLNDKLENELANKESLHRQCEEKARHLQELLEVAEQKLQQTMRKAETLPEVEAELSQRIAALTKAEERHGNIEEHLRQLEGQLEEKNQELARVRQREKMNEDHNKRLSDTVDRLLSESNERLQLHLKERMAALEEKGRLSEEIEKLRQEVDQLKGRGGPFVDGIHSRSHVGSAADVRFSLSTATHAPPGLHRRYSALRDESAKDWKPSPLPGVLGATTPAFDSDPEISDVDEDEPGGLVGTQVDVISPGGHSDAQTLAMMLQEQLDAINQEIRMIQEEKESTELRAEEIETRVTSGSMEALNLTQLRKRGSIPTSLTALSLASASPPLSGRSTPKLTSRSAAQDLDRMGVMTLPSDLRKHRRKLLSPVSREENREDKATIKCETSPPSSPRTLRLEKLGHPGLSQEEGKSALEGQDSNPSSSNSSQDSLHKGAKRKGIKSSIGRLFGKKEKGRLIQLSRDATGHVLLTDSELSLQEPMVPAKLGTQAEKDRRLKKKHQLLEDARRKGMPFAQWDGPTVVSWLELWVGMPAWYVAACRANVKSGAIMSALSDTEIQREIGISNALHRLKLRLAIQEMVSLTSPSAPPTSRTSSGNVWVTHEEMETLATSTKTDSEEGSWAQTLAYGDMNHEWIGNEWLPSLGLPQYRSYFMECLVDARMLDHLTKKDLRVHLKMVDSFHRTSLQYGIMCLKRLNYDRKELEKRREESQHEIKDVLVWTNDQVVHWVQSIGLRDYAGNLHESGVHGALLALDENFDHNTLALVLQIPTQSTQARQVMEREFNNLLALGTDRKLDDGEEKVFRRAPSWRKRFRPRDHHSGGMLGTSAETLPAGFRVSTLGPLQPPPAPPKKIMPEAHSHYLYGHMLSAFRD
Protein: Ubiquitin conjugating enzyme 9 (F4JKF3)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Interaction partners:
Sequence:
MFFFFLIHLTIGLVFDCRVFNWNLDRGILEMASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKNKYESTARTWTQKYAMG
Protein: NAD(P) transhydrogenase subunit beta (EC 7.1.1.1) (Nicotinamide nucleotide transhydrogenase subunit beta) (Pyridine nucleotide transhydrogenase subunit beta) (P0AB67)
Organism: Escherichia coli (strain K12)
Function: The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane.
Subcellular location: Cell inner membrane; Multi-pass membrane protein.
Interaction partners:
- NAD
- Soluble pyridine nucleotide transhydrogenase
- NAD kinase
- NH
- Nicotinate-nucleotide adenylyltransferase
- Nucleoside triphosphate pyrophosphohydrolase
- NAD-capped RNA hydrolase NudC
- NAD-dependent protein deacylase
- Trifunctional NAD biosynthesis/regulator protein NadR
Sequence:
MSGGLVTAAYIVAAILFIFSLAGLSKHETSRQGNNFGIAGMAIALIATIFGPDTGNVGWILLAMVIGGAIGIRLAKKVEMTEMPELVAILHSFVGLAAVLVGFNSYLHHDAGMAPILVNIHLTEVFLGIFIGAVTFTGSVVAFGKLCGKISSKPLMLPNRHKMNLAALVVSFLLLIVFVRTDSVGLQVLALLIMTAIALVFGWHLVASIGGADMPVVVSMLNSYSGWAAAAAGFMLSNDLLIVTGALVGSSGAILSYIMCKAMNRSFISVIAGGFGTDGSSTGDDQEVGEHREITAEETAELLKNSHSVIITPGYGMAVAQAQYPVAEITEKLRARGINVRFGIHPVAGRLPGHMNVLLAEAKVPYDIVLEMDEINDDFADTDTVLVIGANDTVNPAAQDDPKSPIAGMPVLEVWKAQNVIVFKRSMNTGYAGVQNPLFFKENTHMLFGDAKASVDAILKAL
Protein: Ubiquitin carboxyl-terminal hydrolase 16 (EC 3.4.19.12) (Deubiquitinating enzyme 16) (Ubiquitin thioesterase 16) (Ubiquitin-processing protease UBP-M) (Ubiquitin-specific-processing protease 16) (Q9Y5T5)
Organism: Homo sapiens (Human)
Function: Specifically deubiquitinates 'Lys-120' of histone H2A (H2AK119Ub), a specific tag for epigenetic transcriptional repression, thereby acting as a coactivator. Deubiquitination of histone H2A is a prerequisite for subsequent phosphorylation at 'Ser-11' of histone H3 (H3S10ph), and is required for chromosome segregation when cells enter into mitosis. In resting B- and T-lymphocytes, phosphorylation by AURKB leads to enhance its activity, thereby maintaining transcription in resting lymphocytes. Regulates Hox gene expression via histone H2A deubiquitination. Prefers nucleosomal substrates. Does not deubiquitinate histone H2B.
Subcellular location: Nucleus {ECO:0000305|PubMed:17914355}. Cytoplasm {ECO:0000269|PubMed:32129764}.
Interaction partners:
- Histone H2A type 2-C
- Histone H2A type 2-A
- Polyubiquitin-C
- E3 ubiquitin-protein ligase HERC2
- FYVE, RhoGEF and PH domain-containing protein 6
Sequence:
MGKKRTKGKTVPIDDSSETLEPVCRHIRKGLEQGNLKKALVNVEWNICQDCKTDNKVKDKAEEETEEKPSVWLCLKCGHQGCGRNSQEQHALKHYLTPRSEPHCLVLSLDNWSVWCYVCDNEVQYCSSNQLGQVVDYVRKQASITTPKPAEKDNGNIELENKKLEKESKNEQEREKKENMAKENPPMNSPCQITVKGLSNLGNTCFFNAVMQNLSQTPVLRELLKEVKMSGTIVKIEPPDLALTEPLEINLEPPGPLTLAMSQFLNEMQETKKGVVTPKELFSQVCKKAVRFKGYQQQDSQELLRYLLDGMRAEEHQRVSKGILKAFGNSTEKLDEELKNKVKDYEKKKSMPSFVDRIFGGELTSMIMCDQCRTVSLVHESFLDLSLPVLDDQSGKKSVNDKNLKKTVEDEDQDSEEEKDNDSYIKERSDIPSGTSKHLQKKAKKQAKKQAKNQRRQQKIQGKVLHLNDICTIDHPEDSEYEAEMSLQGEVNIKSNHISQEGVMHKEYCVNQKDLNGQAKMIESVTDNQKSTEEVDMKNINMDNDLEVLTSSPTRNLNGAYLTEGSNGEVDISNGFKNLNLNAALHPDEINIEILNDSHTPGTKVYEVVNEDPETAFCTLANREVFNTDECSIQHCLYQFTRNEKLRDANKLLCEVCTRRQCNGPKANIKGERKHVYTNAKKQMLISLAPPVLTLHLKRFQQAGFNLRKVNKHIKFPEILDLAPFCTLKCKNVAEENTRVLYSLYGVVEHSGTMRSGHYTAYAKARTANSHLSNLVLHGDIPQDFEMESKGQWFHISDTHVQAVPTTKVLNSQAYLLFYERIL
Protein: Ubiquitin-specific peptidase 18 (Ubl carboxyl-terminal hydrolase 18) (E7EYZ1)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Interaction partners:
- S-adenosylmethionine-dependent nucleotide dehydratase RSAD2
- RNA helicase
- ISG15 ubiquitin-like modifier
- Cytidine monophosphate
- Interferon-induced with helicase C domain 1.
- E3 ubiquitin-protein ligase TRIP12
- Ubiquitin carboxyl-terminal hydrolase 13
- Interferon-induced GTP-binding protein MxC
- Interferon-induced GTP-binding protein MxB
- Interferon-induced GTP-binding protein MxA
Sequence:
MGDYWSKMAYHRRYIRSSSWSSNRGYEVRGLFNDGLSCCVNALLQSFSATTELLDILNKWNPSDGIEQSNIPLQLRNTLLSVRDPSHSAPHKGFLDCLYRHAICRYTQQDADEIFHMILNLSLKQMPDHELAQEIRSLYTIEVETQVTCMDCTFIHRLPNSYFSLPLVIHEGENTLESCIKSFFKKQKLEVSEKFFCDRCEKKQPCAYEQKLVSLPQILCVHLKRFRNEHGLIKKLDSKVTFPETLKISVFAAGQSENAASDSPQADYSLFAVIVHIGSAMFGHYTAFIRQTQDQMWYYANDSRVNQATWKDVQDTYKGRETAYLLLYRKKSLDSSG