wanglab/gogpt-training-data huggingface dataset:
Protein: Protein ORANGE, chloroplastic (AtOR) (DnaJ-like cysteine-rich domain-containing protein OR) (Q9FKF4)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Involved in chromoplast differentiation. Associated with a cellular process that triggers the differentiation of pro-plastids or other non-colored plastids into chromoplasts for carotenoid accumulation. Is associated with carotenoid accumulation in chromoplasts. Functions as a major regulator of the phytoene synthase PSY1 protein level and activity. Modulates carotenoid biosynthesis by means of post-transcriptional regulation of PSY1. Modulates carotenoid biosynthesis in part by up-regulating a series of endogenous carotenogenic genes.
Subcellular location: Plastid, chloroplast membrane {ECO:0000269|PubMed:25675505, ECO:0000269|PubMed:26224804, ECO:0000269|PubMed:34405771, ECO:0000305|PubMed:26634929}. Nucleus {ECO:0000269|PubMed:26634929, ECO:0000269|PubMed:34405771}. Cytoplasm {ECO:0000269|PubMed:34405771}. Note=First translated in the cytoplasm before being targeted to either chloroplasts or the nucleus, depending on its ubiquitination status (PubMed:34405771). Localizes in the nucleus in etiolated cotyledons (PubMed:26634929). {ECO:0000269|PubMed:26634929, ECO:0000269|PubMed:34405771}.
Interaction partners:
- Phytoene synthase 1, chloroplastic
- 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic
- Cysteine/Histidine-rich C1 domain family protein
- Lycopene beta cyclase, chloroplastic
- Zeta-carotene desaturase, chloroplastic/chromoplastic
- DnaJ/Hsp40 cysteine-rich domain superfamily protein
- 15-cis-phytoene desaturase, chloroplastic/chromoplastic
- Protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic
- 15-cis-zeta-carotene isomerase, chloroplastic
- Prolycopene isomerase, chloroplastic
Sequence:
MSSLGRILSVSYPPDPYTWRFSQYKLSSSLGRNRRLRWRFTALDPESSSLDSESSADKFASGFCIIEGPETVQDFAKMQLQEIQDNIRSRRNKIFLHMEEVRRLRIQQRIKNTELGIINEEQEHELPNFPSFIPFLPPLTAANLKVYYATCFSLIAGIILFGGLLAPTLELKLGIGGTSYADFIQSLHLPMQLSQVDPIVASFSGGAVGVISALMVVEVNNVKQQEHKRCKYCLGTGYLACARCSSTGALVLTEPVSAIAGGNHSLSPPKTERCSNCSGAGKVMCPTCLCTGMAMASEHDPRIDPFD
Protein: Interleukin 13 receptor subunit alpha 1 (A0A8I6A7D4)
Organism: Rattus norvegicus (Rat)
Subcellular location: Membrane {ECO:0000256|ARBA:ARBA00004479}; Single-pass type I membrane protein {ECO:0000256|ARBA:ARBA00004479}.
Interaction partners:
Sequence:
IVSVENLCTIVWTWSPPEGASPNCSLRYFSHFDDQQDKKIAPETRRKKELPLNEKICLQVGSQCSTNESEKPSPLVKKCISPPEGDPESAVTELQCIWHNLSYMKCSWLPGKNTSPDTNYTLYYWYSSLGKSLQCENIHREGQHIGCSFKLTKVESNYEHHNIQIMVKDNAGKIRPSYKIVSFTSNVKPGPPHIKHLFLKNGALFVQWKNPQNFSSRCLSYEVEVNSTQTDSYNSNSLEVEEDKCQNSEFDRNMEGASCFISPGVLANTVYTVRVRVKTNKLCFDDNDLWSNWSEALSIGKEPNSTFYTTMLLIIPVFVAVVIIILLFYLKRLKIIIFPPIPDPGKIFKEMFGDQNDDTLHWKKYDIYEKQSKEETDSVVLIENLKKAAP
Protein: E3 ubiquitin-protein ligase makorin-3 (EC 2.3.2.27) (RING finger protein 63) (RING-type E3 ubiquitin transferase makorin-3) (Zinc finger protein 127) (Q13064)
Organism: Homo sapiens (Human)
Function: E3 ubiquitin ligase catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins.
Subcellular location: Nucleus {ECO:0000269|PubMed:34692086}.
Interaction partners:
- MAGE-like protein 2
- Small nuclear ribonucleoprotein-associated protein N
- Necdin
- Phospholipid-transporting ATPase VA
- SNRPN upstream reading frame protein
- Nuclear pore-associated protein 1
- Ubiquitin-protein ligase E3A
- P protein
- Gamma-aminobutyric acid receptor subunit beta-3
- Progonadoliberin-1
Sequence:
MEEPAAPSEAHEAAGAQAGAEAAREGVSGPDLPVCEPSGESAAPDSALPHAARGWAPFPVAPVPAHLRRGGLRPAPASGGGAWPSPLPSRSSGIWTKQIICRYYIHGQCKEGENCRYSHDLSGRKMATEGGVSPPGASAGGGPSTAAHIEPPTQEVAEAPPAASSLSLPVIGSAAERGFFEAERDNADRGAAGGAGVESWADAIEFVPGQPYRGRWVASAPEAPLQSSETERKQMAVGSGLRFCYYASRGVCFRGESCMYLHGDICDMCGLQTLHPMDAAQREEHMRACIEAHEKDMELSFAVQRGMDKVCGICMEVVYEKANPNDRRFGILSNCNHSFCIRCIRRWRSARQFENRIVKSCPQCRVTSELVIPSEFWVEEEEEKQKLIQQYKEAMSNKACRYFAEGRGNCPFGDTCFYKHEYPEGWGDEPPGPGGGSFSAYWHQLVEPVRMGEGNMLYKSIKKELVVLRLASLLFKRFLSLRDELPFSEDQWDLLHYELEEYFNLIL
Protein: Poc1 (D6QUQ2)
Organism: Clytia hemisphaerica
Interaction partners:
Sequence:
MTSALEDPSLERHFKGHRDAVTCLDFNPNMKQLVSGSMDSSLMVFHFKPHMRAYRFVGHKDAITSVSFSPSGHLIASGSRDKTVRLWVPSVKGESTVFKAHMATVRSVDFSRDGQSLLTSSDDKSLKLWAVHRQKFQFSLTGHMNWVRCARFSPDGRLIVSASDDKSIKLWDRTSKECTHTFYEYGGFVNHVEFHPNGTCIAAGGSDNTVKVWDIRMNKLLQHYQVHGGAVNSLSFHPSGNYLVSASADNTLKILDLMEGRLFYTLHGHQGGANCVKFSRNGEYFASGSSDEQVMVWKTNFDTIDYSQVLHAHRKRSATPSSHTPTASVDARSTNGTTDADSTAINGFSKPVTQNGTGNDSDDIMNVGPALFSIPQPSGRDYSELARPASSKNGQVGEIPTTTPLERRDIPPQLSETLEHIVGQLDVITQTVSILEQRLTMCENKLRDCLDNQHRISLQIKPT
Protein: Aromatase (EC 1.14.14.14) (CYPXIX) (Cytochrome P-450AROM) (Cytochrome P450 19A1) (Estrogen synthase) (Q92112)
Organism: Taeniopygia guttata (Zebra finch) (Poephila guttata)
Function: Catalyzes the formation of aromatic C18 estrogens from C19 androgens.
Subcellular location: Membrane; Peripheral membrane protein.
Interaction partners:
- Estradiol 17-beta-dehydrogenase
- Hydroxysteroid 17-beta dehydrogenase 12
- Steroid 17-alpha-hydroxylase/17,20 lyase
- Cytochrome P450 1A
- 3-keto-steroid reductase/17-beta-hydroxysteroid dehydrogenase 7
- unspecific monooxygenase
- Hydroxysteroid 17-beta dehydrogenase 2
- 3-oxo-5-alpha-steroid 4-dehydrogenase
- Hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1
- 3-oxo-5-alpha-steroid 4-dehydrogenase
Sequence:
MVLETLNPLHYNITSLVPDTMPVATVPILILMCFLFLIWNHEETSSIPGPGYCMGIGPLISHGRFLWMGVGNACNYYNKTYGDFVRVWISGEETFIISKSSSVSHVMKHWHYVSRFGSKLGLQCIGMYENGIIFNNNPAHWKEIRPFFTKALSGPGLVRMIAICVESTTEHLDRLQEVTTELGNINALNLMRRIMLDTSNKLFLGVPLDENAIVLKIQNYFDAWQALLLKPDIFFKISWLCKKYKDAVKDLKGAMEILIEQKRQKLSTVEKLDEHMDFASQLIFAQNRGDLTAENVNQCVLEMMIAAPDTLSVTLFFMLILIAEHPTVEEEMMREIETVVGDRDIQSDDMPNLKIVENFIYESMRYQPVVDLIMRKALQDDVIDGYPVKKGTNIILNIGRMHKLEFFPKPNEFSLENFEKNVPSRYFQPFGFGPRSCVGKFIAMVMMKAILVTLLRRCRVQTMKGRGLNNIQKNNDLSMHPIERQPLLEMVFTPRRNANENQGDGMDQH
Protein: Neural precursor cell expressed, developmentally down-regulated 9 (F1NW90)
Organism: Gallus gallus (Chicken)
Subcellular location: Cell junction, focal adhesion {ECO:0000256|ARBA:ARBA00004246}. Cytoplasm {ECO:0000256|ARBA:ARBA00004496}.
Interaction partners:
Sequence:
MNLMARALYDNVPECAEELAFRKGDILTVIEQNTEGLEGWWLCSLHGRQGIVPGNRVKLLIGPVVQDGPSSQDMSNSGLTHQSFNQQKIYQVPSSHASARDPVYQVPPSHTNQGIYQIPTGHGVAGQDIYQVPPSTQRCLDGPPLTNKVVTPVRSGQGYVYEFPSKYQKDTYDIPPVRPLQGIYDIPPTSAKGTAHSVPTGDAKALGVYDVPPAKGMYATPPSTCRDDVGLRDNLQDFSSPAGHNARQEGVYDIPPPITKATGKELIKKFSSEGLALTDGAPHKQSVYDIPVNHQNHFLGQQIAPQKDVYDTPRGIAFPGQQTGLNESLASEGREGVYDVPPPVLQDTKGLQDVTDGMNRLSFSSTGSTRSNMSTSSTTSKDSSFSASTTQDKRLILDPDTAIERLYRLQQMVETAVNNLMAFATADWRSYSYMEKHINEIHTAVDKVEQSLLEYLQFAKGSAANASFLSEISLHNKMRREVQRLEDSHQILTQTSHDLNSYNWSLNVLAVNRLQNKCDDLDRFVMVAKTVPDDAKQLTTTISVNAELLFKQVSGSSRFRSVPENMNAPDYAYNSPHMQRHGEKPQNHFSSLPPLLSKGQQPHSTASESSEKSWMDDYDYVHLQGKEEFERQQKELLEKENIIKQSKTELEHHQINQFQRLEQEITKPVENDISKWKPPQALQTANSTIAFHDRQPLLFYSDQYETHFNSLLNTIDAFFSCVSASQPPRIFVAHSKLVILSAHKLVFIGDTLTRQLTSQDIRNRVRNSSDQLCELLKSIVMATKMAALHYPHTAALQEMVNRVTELSYHAQLFKLSLVQMASL
Protein: Disease resistance protein (TIR-NBS class) (F4IF04)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Interaction partners:
- AT4g11790/T5C23_220
- At4g21108/At4g21108
- F-box/kelch-repeat protein At5g42350
- Receptor-like protein 18
- Subtilisin-like protease SBT2.6
- At1g31410
- Protein PECTIC ARABINOGALACTAN SYNTHESIS-RELATED
- Putative clathrin assembly protein At4g40080
- Expressed protein
- At1g72880
Sequence:
MNTIFKKLSCFKKKVKSLRIFESRSLSSSSSSSFTPQKFDVFLSFRGKDTRKNFVSFLYKALVSKGIRTFKDDEELERGRPIPPELRQAIKGSRIAVVVVSVTYPASSWCLEELREILKLEKLGLLTVIPIFYEINPSDVRRQSGVVSKQFKKHEKRQSRERVKSWREALTKLASLSGECSKNWEDLSNRFSKFRFLSLFLKGLRLCFSREDDSKLVDGITEKISTKLFSEKPRNDNILIGIDQHMGELYPLFNLNSNEDVQVIGIWGRGSNGRSALASHVYQNIKHHFEAHCFLEDVRRISLHFRDSHLQDELLSNMQGEGLTTKNCHRCLKTIKARLRNKKVLLVANDVDKLEQFDALAEEFSWFGPGSRIIITTQDRQLLISSVVRSVYEVKLLRCYAVRELFRSNAFKERERDDPVGFDQSTYRAMYISGHVFLTLRYIFTLLCDRVNVTPFFYIWMCHLCMDLCTIHLVNYFILKTVHNKFI
Protein: Neural retina-specific leucine zipper protein (NRL) (P54845)
Organism: Homo sapiens (Human)
Function: Acts as a transcriptional activator which regulates the expression of several rod-specific genes, including RHO and PDE6B. Functions also as a transcriptional coactivator, stimulating transcription mediated by the transcription factor CRX and NR2E3. Binds in a sequence-specific manner to the rhodopsin promoter.
Subcellular location: Cytoplasm {ECO:0000269|PubMed:11477108}. Nucleus {ECO:0000269|PubMed:11477108, ECO:0000269|PubMed:17335001}.
Interaction partners:
- Cone-rod homeobox protein
- Photoreceptor-specific nuclear receptor
- Rhodopsin
- Flt3-interacting zinc finger protein 1
- Fascin-2
- Retinoid isomerohydrolase
- Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta
- Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha
- Guanine nucleotide-binding protein G
- Retinitis pigmentosa 9 protein
Sequence:
MALPPSPLAMEYVNDFDLMKFEVKREPSEGRPGPPTASLGSTPYSSVPPSPTFSEPGMVGATEGTRPGLEELYWLATLQQQLGAGEALGLSPEEAMELLQGQGPVPVDGPHGYYPGSPEETGAQHVQLAERFSDAALVSMSVRELNRQLRGCGRDEALRLKQRRRTLKNRGYAQACRSKRLQQRRGLEAERARLAAQLDALRAEVARLARERDLYKARCDRLTSSGPGSGDPSHLFL
Protein: Internal scaffolding protein B (EC 3.4.-.-) (Scaffolding protein B) (GPB) (P03633)
Organism: Enterobacteria phage phiX174 (Isolate Sanger) (Bacteriophage phi-X174)
Function: Participates in the assembly of the viral procapsid in the cytoplasm. Forms first a 12S pre-assembly complex with protein H, and F and G pentamers, then twelve 12S complexes are joined by the D protein to form the procapsid. Internal scaffold protein B is released from the procapsid upon genome packaging. Autoproteolytic activity cleaves protein B and probably facilitates its removal through the pores of the procapsid.
Subcellular location: Host cytoplasm.
Interaction partners:
Sequence:
MEQLTKNQAVATSQEAVQNQNEPQLRDENAHNDKSVHGVLNPTYQAGLRRDAVQPDIEAERKKRDEIEAGKSYCSRRFGGATCDDKSAQIYARFDKNDWRIQPAEFYRFHDAEVNTFGYF
Protein: Protein disulfide-isomerase TMX3 (EC 5.3.4.1) (Thioredoxin domain-containing protein 10) (Thioredoxin-related transmembrane protein 3) (Q8BXZ1)
Organism: Mus musculus (Mouse)
Function: Probable disulfide isomerase, which participates in the folding of proteins containing disulfide bonds. May act as a dithiol oxidase (By similarity).
Subcellular location: Endoplasmic reticulum membrane {ECO:0000250|UniProtKB:Q96JJ7}; Single-pass membrane protein {ECO:0000250|UniProtKB:Q96JJ7}.
Interaction partners:
- Protein unc-50 homolog
- Thioredoxin-related transmembrane protein 4
Sequence:
MANAVGRRSWAALRLCAAVILLDLAVCKGFVEDLNESFKDNRKDDIWLVDFYAPWCGHCKKLEPIWNEVGLEMKSIGSPVKVGKMDATSYSSIASEFGVRGYPTIKLLKGDLAYNYRGPRTKDDIIEFAHRVSGALIRPLPSQQMFDHVRKRHRVFFVYIGGESPLKEKYIDAASELIVYTYFFSASEDVVPEYVTLKEMPAVLVFKDDTYFVYDEYEDGDLSSWISRERFQNYLTMDGFLLYELGDTGKLVAIAVIDEKNTSLEHTRLKSIIQEVARDFRDHFHRDFQFGHMDGNDYINTLLMDELTVPTIVVLNTSNQQYFLLDRHIKDASDMVQFINSILDGTVPAQGGDSIFQRLKRIVFDAKSTIVSIFKSSPLMGCFLFGLPLGVISIMCYGIYTADTDGGYIEERYEVSKSEMENQEQIEESKEQESSSGGSLAPTVQEPKDVLEKKKD
Protein: G1/S-specific cyclin-E2 (O96020)
Organism: Homo sapiens (Human)
Function: Essential for the control of the cell cycle at the late G1 and early S phase.
Subcellular location: Nucleus {ECO:0000269|PubMed:9840943}.
Interaction partners:
- Cyclin-dependent kinase 2
- Cyclin-dependent kinase inhibitor 1
- Cyclin-dependent kinase inhibitor 1B
- Cyclin-dependent kinase 4
- M-phase inducer phosphatase 1
- Cyclin-dependent kinase inhibitor 1C
- Retinoblastoma-like protein 2
- Cyclin-dependent kinase 6
- Cyclin-dependent kinase 3
- Retinoblastoma-associated protein
Sequence:
MSRRSSRLQAKQQPQPSQTESPQEAQIIQAKKRKTTQDVKKRREEVTKKHQYEIRNCWPPVLSGGISPCIIIETPHKEIGTSDFSRFTNYRFKNLFINPSPLPDLSWGCSKEVWLNMLKKESRYVHDKHFEVLHSDLEPQMRSILLDWLLEVCEVYTLHRETFYLAQDFFDRFMLTQKDINKNMLQLIGITSLFIASKLEEIYAPKLQEFAYVTDGACSEEDILRMELIILKALKWELCPVTIISWLNLFLQVDALKDAPKVLLPQYSQETFIQIAQLLDLCILAIDSLEFQYRILTAAALCHFTSIEVVKKASGLEWDSISECVDWMVPFVNVVKSTSPVKLKTFKKIPMEDRHNIQTHTNYLAMLEEVNYINTFRKGGQLSPVCNGGIMTPPKSTEKPPGKH
Protein: RNA polymerase sigma factor sigC (Sigma factor C) (Sigma-C) (RNA polymerase sigma factor sig3) (Atsig3) (Sigma factor 3) (O24621)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Sigma factors are initiation factors that promote the attachment of plastid-encoded RNA polymerase (PEP) to specific initiation sites and are then released.
Subcellular location: Plastid, chloroplast {ECO:0000269|PubMed:10555304, ECO:0000269|PubMed:12602869, ECO:0000269|PubMed:9405719}. Note=Seems attached to membranes. {ECO:0000269|PubMed:12602869}.
Interaction partners:
- Protein PsbN
- Photosystem II D2 protein
- NAD
- At2g21530
- Photosystem II CP47 reaction center protein
- DNA-directed RNA polymerase 3, chloroplastic
- Photosystem II reaction center protein H
- Photosystem I reaction center subunit IX
- Zinc finger CCCH domain-containing protein 18
Sequence:
MASFNSFPIPKQIVGSSSSSSSSTSRPRILVRSSLTSSMTSTNSMLVFVHPHPLIKHWLSLLRSDQTSFPIFVRIPMTSVVATRWSFLSSVKEESRIYQNDSLKACGCASVSPYTAQNNVYVELKDPKENIGVGSAERSYSSRSMLQYNLLAKNLLALEETFVALDSVRMERDIMLQMGKLGAAELFKTCLSRYRGSSITSCLSDTTELVDTTPNQQVFVSSRRKVKKKARRSSVTAENGDQSSLPIGLRTTWNNIDVPRVRRPPKYRKKRERISRNETEMSTGVKIVADMERIRTQLEEESGKVASLSCWAAAAGMNEKLLMRNLHYGWYCRDELVKSTRSLVLFLARNYRGLGIAHEDLIQAGYVGVLQGAERFDHTRGYKFSTYVQYWIRKSMSTMVSRHARGVHIPSSIIRTINHIQKARKTLKTSHGIKYAADEEIAKLTGHSVKKIRAANQCLKVVGSIDKKVGDCFTTKFLEFTPDTTMESPEEAVMRQSARRDIHDLLEGLEPREKQVMVLRYGLQDYRPKSLEEIGKLLKVSKEWIRKIERRAMAKLRDQPNAEDLRYYLNQ
Protein: Discontinuous actin hexagon, isoform B (M9PHN1)
Organism: Drosophila melanogaster (Fruit fly)
Interaction partners:
Sequence:
MLRSSVPVQLTKLRNSAEAVASIAREKGSQGGQGQKQQVDKELSTIMDDLQRDYGNYKYTVYRCASKFVALQKIFHTGKIPYKLVLAILDRHNLSGGLELMVPPFQLTSLLHDVYFACEKLGHFNQDANYKLDRATGLLANFFWNVYDPHSISLLEIRITFILLCKLYSSDHLVGDIFGLLADPKSQIISRYAFEQLLATLSKLLSYLGEAKAYGVHNLPLAMEQCFARCPHGVGGLTEPQFHKLWTGAGVQTRFLIYGNLLALVKRIEDTEHLIHSNSCAGCRKEHIVGIRFRCQVCRDISLCLPCFAVGFAGGRHEPGHRMCEVFVEDQPPLRWTRHLARLCGWLVMPRKTQEEERRGFCNAQESGPALGQSAATPIPAETRSVRSQCQEKDRTVVLQQQQQELCSLTGLASEASSRLQSIIDRLLLQNAKLETQLQTVATASSSEISQFLSAHQCFLLQIIEDMRQLSHASAVTSPPPAPAAQVAPSAAPLVSSTFLSSSTPQRQMLFDMYAPVGANLTHSINGADLNRSYLEANKSDYSLNDISLWFDQRRSSVQPGQGPGSLPAPLPLPMPLGALLEQQPANGGDGRDTEMVNFKLLLHKVKEIVEDSYSDNAELSAATQNLENVLDSIIKSEEQQRRIST
Protein: Dihydrolipoyl dehydrogenase (EC 1.8.1.4) (A0A0H2ZLP5)
Organism: Streptococcus pneumoniae serotype 2 (strain D39 / NCTC 7466)
Interaction partners:
Sequence:
MPKAGVDMTEGQIVQWNKKVGEFVKEGEILLEIMTDKVSMELEAEEDGYLIAILKGDGETVPVTEVIGYLGEERENIPTAGAASPEASPVPVASTSNDDGKSDDAFDIVVIGGGPAGYVAAIKAAQFGGKVALVEKSELGGTCLNRGCIPTKTYLHNAEIIENIGHAANRGIVIENPNFTVDMEKLLETKSKVVNTLVGGVAGLLRSYGVTVHKGIGTITKDKNVLVNGSELLETKKIILAGGSKVSKINVPGMESPLVMTSDDILEMNEVPESLVIIGGGVVGIELGQAFMTFGSKVTVIEMMDRIVPAMDVEVSKNLRLILERKGMTILTGTKLQEIIEENGQLRIKVEGKDDIIASKALLSIGRMPDLEGIGEVEFELDRGCIKVNEYMETSVPGIYAPGDINGTKMLAHAAFRMGEVSAENALKGNHAVAKLNLTPAAIYTLPEVAAVGLTEEQAREKYDVAIGKFNFAANGRAIASDAAQGFVKVIADKKYGEILGVHIIGPAAAELINEASSIIEMEITVEEMLKTIHGHPTYSEVMYEAFADVLGMAIHSPKKK
Protein: ALG-2 interacting protein X (LD25543p) (Q9VB05)
Organism: Drosophila melanogaster (Fruit fly)
Interaction partners:
- Charged multivesicular body protein 4
- Tumor suppressor protein 101
- Programmed cell death protein 6
- Multivesicular body subunit 12A
- vesicle-fusing ATPase
- GH27120p
- Vacuolar protein sorting 20, isoform A
- Vacuolar protein sorting-associated protein 28 homolog
- Vacuolar protein sorting-associated protein VTA1 homolog
- IST1 homolog
Sequence:
MSKFLGVPLKKPSEVDVIKPLNNLIQSTYNGASEEEKGKYGEAVNEFSKQRNTAIWKFFEKYEASLEIVYAYYDQICALETKISVSELQIPFKWKDAFDKGSIFGGKISLTHTSLLYEKVCVLFNIAALQSNIAANQSLDSDDGLKLTIKLLQQSAGIFQYLKGATPAAVPSEPTPDLSQDTLTVLQALMVAQAQEVFILKAIKDNLKDQIIAKLCCQAEESYADVLRAMQKESVRSLWEKEWIPTIAGKQAGFHALTQLYQSLVCRAAKKIGEEIARLRNAIDLFKAAQTRSGNETYLDEYFSRAKRNLTESTKDNEFIYNEIIPELSTLTSPGKAQLAKPLPIAVPLAENFKDIFSSLVPVELHRALTASDMRRNEIVNVEIMKLREATQTLNAVLASLNLPAAVETADGNSGLPPSLKEKANEVRQKGGIENVQTMLKDLPELLNRNREILDETERLLDEERDSDNQLRAQFKDRWTRISSDKLTEMFRTNAKKYREVITNAIEADKVVRQKFEANQKGIQLLSLPPDQIQQSLPSASGSVDPNCSSVQRLKKLMDDVETIKAEREAIESELKGATFNMKDEFLIALQKDGAIDEPALSLARIGQVLNPLQQQVRESVERQQSLVSEIQSAHGAFVSETGSCGSSRDTLYQELATAFDSYIELSGNLQEGTKFYNDLTQLLVVFQNKISDFVFARKTEKEELLKDLTTESSRQACPATPALPSHYASTSGSGSDIPPGSAPSVPPAASTANIPYPAQVQGMPIPYGAQPGVPYPAYVPAPMPQSFNPYATLPYPGNYQYQGFPQGPPPGHYGTYPGSYANQQGGYPNQKPPGW
Protein: Nephrin (Q1KMS5)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Subcellular location: Membrane {ECO:0000256|ARBA:ARBA00004479}; Single-pass type I membrane protein {ECO:0000256|ARBA:ARBA00004479}.
Interaction partners:
Sequence:
MDSWLSLVFSSGCFLLLVDFKGVCGQQAFKTEPRNVTVRAGATALLKCEVLRASGAVQWVKDGLLLRPLRSLPGYPRYSMTGDQKKGQYHLQILDVTLEDDGPYECQVGRSESSRPIVSRTVWLNVQIPSSQPYFQLESEEPWVEGEQYTVTCIAPDAKPPAEITIFRDGEELLESESYTMSGSQDKLQNTHAEVTIRARSSDDTRRLTCRAKNPASPRALETGMTMKVYFPPQAPMIMGLENEEVKAGSFLKVVCMSYGGNPLATLHWTKNGEVLSTSWDVDFVSRRASSVLKMEVKPEDNHAVLQCQSINQVTRSPMSLTRTLTVPFEPAEVTLLGSFEAVEGEEINLSCSTSSSNPPVHIRWWLGFKELNRTEVTFAEGDNGGMMTVSNLTHKVSREDNGLSLQCEAFNKGTRFSSVRAAELIVYYPPQKVWLDAPPPNVFLHSGSTLRLVCFSSGGNPTGQLTWLKNNKVVLTASKQVSSERGVSRELLLTLHPSDNLATYRCDSSNKAKKVLSAQTKFRVLFPAVSVKIVAKQKELRRGQTLDLDCLAGSSNPTANISWSLGPVILKGVDQAPKRAEFGGMSRTSKLSLTLEPHHWRKRITCQAFSNVLSEGVNNFYSLDVLFPPEFSAEQPDEVQVIEDETATLPAKVSANPDEITCEWIFQGEKLVKERDPRYTFSDWTLEIVNVSRRDGGDYIIECSNAEGSNRTKLRLDVQYSPTVRMKSDPVFVNIGDTADLLCVADANPITSSMFSWKWMGEGERDELGEESEDDGTGVLTIYEVTRDRAGVYQCTADNGISPTGSVEGQLIVRFAPDLQKGPQWRKVASRGDGSNDANVVCQAQGVPRVQFRWAKNGFPLDLGNPRYEETTESTGTIHTSILTVINVSAALDYAIFTCTAHNSMGEDSLDIQLLSTNHPDPPSDLKLLRVDQTSVTLEWMPGFDGGLTQIFRVRYQWAGSASYMYVDVFPPTATVYTVTGLNPSTMYNFSVNALNSIGESSYADNNKILTVTTADAKEADGGVSTADQDSALAGGGLPVYVVVILVVGGVLFLLNPFICFLLARWKRRRSLKGNTSSISQETKSEEQRSTASSSTRYASRELINASAQRTLLVDSSSEPDSSVYESYGRQENPHYYYPTEAYSPALYAHPEGPEDCDGRHGTSPFTHVYEEVRGMYEDLQACSPLPPAAHIHPQAPFSTYYEGRAYSKADVDVTIGAYDSMVYRRRRDTDLPFELRGELV
Protein: NADP-dependent malic enzyme 1 (AtNADP-ME1) (NADP-malic enzyme 1) (EC 1.1.1.40) (O82191)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Subcellular location: Cytoplasm {ECO:0000250}.
Interaction partners:
- Malate synthase
- Fumarate hydratase 1, mitochondrial
- Fumarate hydratase 2
- Malate dehydrogenase, chloroplastic
- Pyruvate, phosphate dikinase 1, chloroplastic
- D-lactate dehydrogenase [cytochrome], mitochondrial
- L-lactate dehydrogenase
- Acetolactate synthase, chloroplastic
- Glutamate--glyoxylate aminotransferase 1
- Alanine aminotransferase 2, mitochondrial
Sequence:
MEKVTNSDLKSSVDGGVVDVYGEDSATIEHNITPWSLSVSSGYSLLRDPRYNKGLAFTEKERDTHYLRGLLPPVVLDQKLQEKRLLNNIRQYQFPLQKYMALTELQERNERLFYKLLIDNVEELLPIVYTPTVGEACQKFGSIFRRPQGLFISLKDKGKILDVLKNWPERNIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYSALGGVRPSACLPVTIDVGTNNEKLLNDEFYIGLRQKRATGQEYSELLNEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYSDTHLVFNDDIQGTASVVLAGLVSAQKLTNSPLAEHTFLFLGAGEAGTGIAELIALYMSKQMNASVEESRKKIWLVDSKGLIVNSRKDSLQDFKKPWAHEHEPVKDLLGAIKAIKPTVLIGSSGVGRSFTKEVIEAMSSINERPLIMALSNPTTQSECTAEEAYTWSKGRAIFASGSPFDPVEYEGKVFVSTQANNAYIFPGFGLGLVISGAIRVHDDMLLAAAEALAGQVSKENYEKGMIYPSFSSIRKISAQIAANVATKAYELGLAGRLPRPKDIVKCAESSMYSPTYRLYR
Protein: Helix-loop-helix protein 4 (P34555)
Organism: Caenorhabditis elegans
Function: Acts as a transcriptional regulator. May mediate transcriptional activation by binding to the E-box motif 5'-CANNTG-3'. Required for the correct morphology, terminal identity and function of the ADL sensory neurons by controlling the expression of the ADL-specific gene repertoire, including chemoreceptor encoding genes, ion channel encoding genes, neuropeptides and the neurotransmitter eat-4. Regulates the expression of the srh-234 chemoreceptor encoding gene in the ADL neurons under feeding conditions. Plays a role in the chemorepulsive response toward ascaroside pheromones mediated by the ADL sensory neurons.
Subcellular location: Nucleus {ECO:0000255|PROSITE-ProRule:PRU00981}.
Interaction partners:
- Helix-loop-helix protein 10
- Helix-loop-helix protein hlh-2
Sequence:
MPMVVAKRNARERTRVHTVNQAFLVLKQHLPSLRQFTKRVSKLRILNAAITYIDTLLKLIQSSEAVPQSVISATLGPIVPTPVRAVHKISKPDTVISQPIRPLAPVLPRHETYLPAPIAATCAPDHSLVDYRSTFASSLAPPVPMQMPSVFSPQPTFPYMKSLLDYPTYFYQPSTAPPPPPAPTAPQSHLIVNNQLVPMPSYQCF
Protein: Crooked legs, isoform F (M9PD94)
Organism: Drosophila melanogaster (Fruit fly)
Interaction partners:
Sequence:
MQHVSAASSVPSVVTPVVTTGGTTITLGGPPPLPKSEHKEDGKPPHGIEMYKVNIEDISQLFTYHEVFGKIHGDVVNHQLAAAHGGQLPPPPPLPPQVTSHAASAAAAAAAASTNNAAVAAVMASANAAAAAAAAASAGGGLPPATSGNGGQQVTVTTTSSSTSSGGSTTSGGTTTTAGELLMPKMEGGIHGVDGSGNGGNGGGQNVALAPDGTPIATGTHVCDICGKMFQFRYQLIVHRRYHSERKPFMCQVCGQGFTTSQDLTRHGKIHIGGPMFTCIVCFNVFANNTSLERHMKRHSTDKPFACTICQKTFARKEHLDNHFRSHTGETPFRCQYCAKTFTRKEHMVNHVRKHTGQTPHQCDVCGKKYTRKEHLANHMRSHTNETPFRCEICGKSFSRKEHFTNHILWHTAGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCSYCMKTFTRKEHLVNHIRQHTGESPHKCTYCTKTFTRKEHLTNHVRQHTGDSPHRCSYCKKTFTRKEHLTNHVRLHTGDSPHKCEYCQKTFTRKEHLNNHMRQHSSDNPHCCNVCNKPFTRKEHLINHMSRCHTGDRPFTCETCGKSFPLKGNLLFHQRSHTKGQEMERPFACEKCPKNFICKGHLVSHMRSHSGEKPHACTLCSKAFVERGNLKRHMKMNHPDAMMPPPPVHPHPQIPAGVLTQVKQEVKPIIIPHHSATTTMHTIQQITAGAAGGAGAVQLTPGLVPLVTSTLISHNAAAQQQSQKQQAAAAAAAQQQAAAAAAAQQQAAQQQAAAAHQQHQQQVAAQHQQQAAVAAHQQQQQQLQQQQQLLQLSIQQAAHHHQQEQHRQQQQQQHQQQQQQQHHQQQQQGHPQAPPPQQQQQPPPIALISDPSALARAAIQLQHLPANVEQHPVVY
Protein: DNA-(apurinic or apyrimidinic site) endonuclease (EC 3.1.-.-) (E5KN95)
Organism: Homo sapiens (Human)
Subcellular location: Nucleus {ECO:0000256|RuleBase:RU362131}. Cytoplasm {ECO:0000256|RuleBase:RU362131}. Mitochondrion {ECO:0000256|RuleBase:RU362131}.
Interaction partners:
Sequence:
MLRVVSWNINGIRRPLQGVANQEPSNCAAVAVGRILDELDADIVCLQETKVTRDALTEPLAIVEGYNSYFSFSRNRSGYSGVATFCKDNATPVAAEEGLSGLFATQNGDVGCYGNMDEFTQEELRALDSEGRALLTQHKIRTWEGKEKTLTLINVYCPHADPGRPERLVFKMRFYRLLQIRAEALLAAGSHVIILGDLNTAHRPIDHWDAVNLECFEEDPGRKWMDSLLSNLGCQSASHVGPFIDSYRCFQPKQEGAFTCWSAVTGARHLNYGSRLDYVLGDRTLVIDTFQASFLLPEVMGSDHCPVGAVLSVSSVPAKQCPPLCTRFLPEFAGTQLKILRFLVPLEQSPVLEQSTLQHNNQTRVQTCQNKAQVRSTRPQPSQVGSSRGQKNLKSYFQPSPSCPQASPDIELPSLPLMSALMTPKTPEEKAVAKVVKGQAKTSEAKDEKELRTSFWKSVLAGPLRTPLCGGHREPCVMRTVKKPGPNLGRRFYMCARPRGPPTDPSSRCNFFLWSRPS
Protein: Sodium channel protein (E9PHB6)
Organism: Homo sapiens (Human)
Subcellular location: Cell membrane {ECO:0000256|ARBA:ARBA00004651, ECO:0000256|RuleBase:RU361132}; Multi-pass membrane protein {ECO:0000256|ARBA:ARBA00004651, ECO:0000256|RuleBase:RU361132}.
Interaction partners:
Sequence:
MANFLLPRGTSSFRRFTRESLAAIEKRMAEKQARGSTTLQESREGLPEEEAPRPQLDLQASKKLPDLYGNPPQELIGEPLEDLDPFYSTQKTFIVLNKGKTIFRFSATNALYVLSPFHPIRRAAVKILVHSLFNMLIMCTILTNCVFMAQHDPPPWTKYVEYTFTAIYTFESLVKILARGFCLHAFTFLRDPWNWLDFSVIIMAYVSENIKLGNLSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLADVMVLTVFCLSVFALIGLQLFMGNLRHKCVRNFTALNGTNGSVEADGLVWESLDLYLSDPENYLLKNGTSDVLLCGNSSDAGTCPEGYRCLKAGENPDHGYTSFDSFAWAFLALFRLMTQDCWERLYQQTLRSAGKIYMIFFMLVIFLGSFYLVNLILAVVAMAYEEQNQATIAETEEKEKRFQEAMEMLKKEHEALTIRGVDTVSRSSLEMSPLAPVNSHERRSKRRKRMSSGTEECGEDRLPKSDSEDGPRAMNHLSLTRGLSRTSMKPRSSRGSIFTFRRRDLGSEADFADDENSTAGESESHHTSLLVPWPLRRTSAQGQPSPGTSAPGHALHGKKNSTVDCNGVVSLLGAGDPEATSPGSHLLRPVMLEHPPDTTTPSEEPGGPQMLTSQAPCVDGFEEPGARQRALSAVSVLTSALEELEESRHKCPPCWNRLAQRYLIWECCPLWMSIKQGVKLVVMDPFTDLTITMCIVLNTLFMALEHYNMTSEFEEMLQVGNLVFTGIFTAEMTFKIIALDPYYYFQQGWNIFDSIIVILSLMELGLSRMSNLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKNYSELRDSDSGLLPRWHMMDFFHAFLIIFRILCGEWIETMWDCMEVSGQSLCLLVFLLVMVIGNLVVLNLFLALLLSSFSADNLTAPDEDREMNNLQLALARIQRGLRFVKRTTWDFCCGLLRQRPQKPAALAAQGQLPSCIATPYSPPPPETEKVPPTRKETRFEEGEQPGQGTPGDPEPVCVPIAVAESDTDDQEEDEENSLGTEEESSKQESQPVSGGPEAPPDSRTWSQVSATASSEAEASASQADWRQQWKAEPQAPGCGETPEDSCSEGSTADMTNTAELLEQIPDLGQDVKDPEDCFTEGCVRRCPCCAVDTTQAPGKVWWRLRKTCYHIVEHSWFETFIIFMILLSSGALAFEDIYLEERKTIKVLLEYADKMFTYVFVLEMLLKWVAYGFKKYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFGRCINQTEGDLPLNYTIVNNKSQCESLNLTGELYWTKVKVNFDNVGAGYLALLQVATFKGWMDIMYAAVDSRGYEEQPQWEYNLYMYIYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKLGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPLNKYQGFIFDIVTKQAFDVTIMFLICLNMVTMMVETDDQSPEKINILAKINLLFVAIFTGTVLSDIIQKYFFSPTLFRVIRLARIGRILRLIRGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMANFAYVKWEAGIDDMFNFQTFANSMLCLFQITTSAGWDGLLSPILNTGPPYCDPTLPNSNGSRGDCGSPAVGILFFTTYIIISFLIVVNMYIAIILENFSVATEESTEPLSEDDFDMFYEIWEKFDPEATQFIEYSVLSDFADALSEPLRIAKPNQISLINMDLPMVSGDRIHCMDILFAFTKRVLGESGEMDALKIQMEEKFMAANPSKISYEPITTTLRRKHEEVSAMVIQRAFRRHLLQRSLKHASFLFRQQAGSGLSEEDAPEREGLIAYVMSENFSRPLGPPSSSSISSTSFPPSYDSVTRATSDNLQVRGSDYSHSEDLADFPPSPDRDRESIV