wanglab/gogpt-training-data huggingface dataset:
Protein: Arginine biosynthesis bifunctional protein ArgJ, mitochondrial [Cleaved into: Arginine biosynthesis bifunctional protein ArgJ alpha chain; Arginine biosynthesis bifunctional protein ArgJ beta chain] [Includes: Glutamate N-acetyltransferase (GAT) (EC 2.3.1.35) (Ornithine acetyltransferase) (OATase) (Ornithine transacetylase); Amino-acid acetyltransferase (EC 2.3.1.1) (N-acetylglutamate synthase) (AGS)] (Q5AVF8)
Organism: Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) (Aspergillus nidulans)
Function: Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of acetylglutamate from glutamate and acetyl-CoA, and of ornithine by transacetylation between acetylornithine and glutamate.
Subcellular location: Mitochondrion matrix {ECO:0000255|HAMAP-Rule:MF_03124}.
Interaction partners:
- Acetylglutamate kinase
- Amino-acid acetyltransferase, mitochondrial
- Ornithine carbamoyltransferase, mitochondrial
- acetylornithine transaminase
- Argininosuccinate synthase
- argininosuccinate lyase
- Probable carboxypeptidase AN5749
- Glutamate pyruvate transaminase
- NAD-specific glutamate dehydrogenase
- NADP-specific glutamate dehydrogenase
Sequence:
MAPSAQPTAAMATFTRMVKGQMRCYSAPVDAAIPASKRKYIPTSGTYPKGFFVSGTHVGVKASNTKFPDLALITSETPCSAAAVFTTNKFQAAPVQVSKKILNATQGQGIRSVIINSGCANAVTGKGGLEDAMSMATKVDEYTGVAENGTLVMSTGVIGQRLPISKILSKIPEATSSLSSTHDAWLTTARAICTTDTFPKLLSQTFTLPSSPGRTYNIAGMTKGAGMIHPNMATLLGVIATDAPIVPSALQSLLKTSVARSFNAISVDGDTSTNDTVAILANGAAGGAPINSTQNDDYVVMQNILTSFLQSLSQLVVRDGEGATKFVTVRIQNSPDYPSAQLIASTIARSPLVKTALYGRDANWGRILCAIGYTQGVAPGTVVPERTSVSFKPADGSPVLKLLVNGEPEQVDEERASAILQDEDLEIIVDLGGGEKGELGGEEGVYWFCDFSHEYVTINGDYRT
Protein: ETS proto-oncogene 2, transcription factor (A0A8I5ZS11)
Organism: Rattus norvegicus (Rat)
Subcellular location: Nucleus {ECO:0000256|ARBA:ARBA00004123, ECO:0000256|RuleBase:RU004019}.
Interaction partners:
Sequence:
MSPARPALGSPGPWEASTGHVQVGMNDFGIKNMDQVAPVANSFRGTLKRQPAFDTFDGSLFAVLPSLSEEQTLQEVPTGLDSVSHDSATCELPLLTPCSKAVMSQALKATFSGFHKEQRRLGIPKNPWLWNEQQVCQWLHWATNEFSLVNVNLQRFGMNGQMLCNLGKERFLELAPDFVGDILWEHLEQMIKENQEKTEDQYEENSHLNAVPHWINSNTLGFGVEQAPYGMQAPSYLKDGLLDGMCPPSATPAALGSEQELQMLPKSRLNTVSVNYCSISQDFPGGNLNLLNSSSGKPKEHDSPENGGDSFESSDSLLRSWNSQSSLLDVQRVPSFESFEEDCSQSLCLSKPTMSFKDYIQERSDPVEQGKPVIPAAVLAGFTGSGPIQLWQFLLELLSDKSCQSFISWTGDGWEFKLADPDEVARRWGKRKNKPKMNYEKLSRGLRYYYDKNIIHKTSGKRYVYRFVCDLQNLLGFTPEELHAILGVQPDTED
Protein: Tumor protein p53 binding protein, 2 (A0A8I6ANU5)
Organism: Rattus norvegicus (Rat)
Subcellular location: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
Interaction partners:
Sequence:
MFLTVYLSNSEQHFTEVPVTPETVCRDVVDLCKEPGESDCHLAEVWCGSERPVADNERMFDVLQRFGSQRNEVRFFLRHERPPNRDIVSGPRSQDAGVKRNGVKVPGEHRRKENGVNSPRLDLTLAELQEMASRQQQQIEAQQQMLATKEQRLKFLKQQDQRQQQQAAEQEKLKRLREIAESQEAKLKKVRALKGHVEQKRLSNGKLVEEIEQMNSLFQQKQRELVLAVSKVEELTRQLEMLKNGRIDGHHDNQSAVAELDRLYKELQLRNKLNQEQNAKLQQQRECLNKRNSEVAVMDKRVNELRDRLWKKKAALQQKENLPVSPDGNPPQQAVSAPSRVAAVGPYMQSSTMPRMPSRPELLGKPALPDSSLVMQSAEGPMKIQTLPNMRSGAASQSKGPKAHSASSDWNPSSTDLLPSQGSGSALDQVDEGEIALREKEKKVRPFSMFDTVDQCAPPPSFGTLRKNQSSEDILRDAQTVNKNVAKVPPPVPTKPKQINLPYFGQTAQSSSDVKPDGNPQQLPIAATSMGAKLKPAGPQARVLLSPSAPSGGQDQVLSPASKQESPPAAAVRPFTPQPSKDTFPPAFRKPQTVAASSIYSMYTQHQVPGKNFQQAVQSASTKTHPRGPHFSSVYGKPVIAAAQNPQQHPENIYSCSQGKPGSPEPETEPVSSVHESHENERIPRPLSPTKLLPFLSNPYRNQSDADLEALRKKLSNAPRPLKKRSSITEPEGPNGPNIQKLLYQRTTIAAMETISVPSYPSKSPSSVTVNPESPIEIPNPYLHVEPEKEAGSLVPEPLSPEDMGSASTENSDMPAPPPGLECVSEGVPDNSTTLQDNTEGTNPEAPHLLEVYLEEYPPYPPPPYPSGEPEVSEEDSARMRPPEVTGQVSLPPGKRTNLRKTGSERIAHGMRVKFNPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQEKMGIMNKGVIYALWDYQPQHDDELLLKEGDCMAVVRREDEDETEWWWARLNDKEGYVPRNLLGLYPRIKPRQRSLA
Protein: Zinc transporter 8 (ZRT/IRT-like protein 8) (OsZIP8) (A3BI11)
Organism: Oryza sativa subsp. japonica (Rice)
Function: Zinc transporter that may mediate zinc uptake from the rhizosphere and may be responsible for the translocation of zinc within the plant.
Subcellular location: Cell membrane {ECO:0000269|PubMed:20496122}; Multi-pass membrane protein {ECO:0000269|PubMed:20496122}.
Interaction partners:
Sequence:
MRTNTTATVLLAAAVALLLATAARGDGGDGGCGKEDAAAGRDRARARGLKIAAFFSILVCGALGCGLPSLGRHVPALRPDGDVFFLVKAFAAGVILATGFIHILPDAFDNLTDDCLPAGGPWKEFPFAGFGAMVGAIGTLVVDTLATGYFTRALSKKDAATAAAVADEEKQSAAATQQHNHHHNHHVVGDGGGGGEEHEGQVHVHTHATHGHAHGSSALVAAVGEDDKETTLRHRVISQVLELGIVVHSVIIGISLGASQNPETIKPLVVALSFHQMFEGMGLGGCIVQAKFKVRSIVTMVLFFCLTTPVGIAVGVGISSVYNESSPTALVVEGILNSVAAGILIYMALVDLLAEDFMNPRVQSKGKLQLGINLAMLAGAGLMSMLAKWA
Protein: Transmembrane channel-like protein (Q3MI88)
Organism: Homo sapiens (Human)
Subcellular location: Membrane {ECO:0000256|ARBA:ARBA00004141, ECO:0000256|RuleBase:RU310713}; Multi-pass membrane protein {ECO:0000256|ARBA:ARBA00004141, ECO:0000256|RuleBase:RU310713}.
Interaction partners:
Sequence:
VEWSGECLRSCRREVQIKVEEKEDETEESSSEEEEEVEDKLPRRESLRPKRKRTRDVINEDDPEPEPEDEETRKAREKERRRRLKRGAEAKKFVSENEGALGKGKGKRWFAFKMMMAKKWAKFLRDFENFKAACVPWENKIKAIESQFGSSVASYFLFLRWMYGVNMVLFILTFSLIMLPEYLWGLPYGSLPRKTVPRAEEASAANFGVLYDFNGLAQYSVLFYGYYDNKRTIGWMNFRLPLSYFLVGIMCIGYSFLVVLKAMTKNIGDDGGGDDNTFNFSWKVFTSWDYLIGNPETADNKFNSITMNFKEAITEEKAAQVEENVHLIRFLRFLANFFVFLTLGGSGYLIFWAVKRSQEFAQQDPDTLGWWEKNEMNMVMSLLGMFCPTLFDLFAELEDYHPLIALKWLLGRIFALLLGNLYVFILALMDEINNKIEEEKLVKANITLWEANMIKAYNASFSENSTGPPFFVHPADVPRGPCWETMVGQEFVRLTVSDVLTTYVTILIGDFLRACFVRFCNYCWCWDLEYGYPSYTEFDISGNVLALIFNQGMIWMGSFFAPSLPGINILRLHTSMYFQCWAVMCCNVPEARVFKASRSNNFYLGMLLLILFLSTMPVLYMIVSLPPSFDCGPFSGKNRMFEVIGETLEHDFPSWMAKILRQLSNPGLVIAVILVMVLAIYYLNATAKGQKAANLDLKKKMKMQALENKMRNKKMAAARAAAAAGRQ
Protein: Dynein axonemal assembly factor 1 homolog (Defective transmitter-recycling protein) (Leucine-rich repeat-containing protein 50 homolog) (Q9U3W5)
Organism: Drosophila melanogaster (Fruit fly)
Subcellular location: Cell projection, cilium {ECO:0000256|ARBA:ARBA00004138}.
Interaction partners:
Sequence:
MGDADRAMNEPEAAKTVSGIQVIPAEDVASIEDIITIDPDCYELDLNHRRIEKLENFEPLTRIERLFLRWNLIKKIENLSSLKTLIELELYDNQITKIENLDDLPHLEVLDISFNRLTKIENLDKLVKLEKVYFVSNRITQIENLDMLTNLTMLELGDNKLKKIENIEMLVNLRQLFLGKNKIAKIENLDTLVNLEILSLQANRIVKIETLEKLANLRELYVSENGVETIENLSENTKLETLDLAKNRLKGIANLEKLELLEELWLNHNGVDDWKDIELLKVNKALQTIYLEYNPLAKDVRYRSKLRDILPQLQKIDATLCKVPGT
Protein: CCT motif family protein (Q8LDM8)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Subcellular location: Nucleus {ECO:0000256|ARBA:ARBA00004123, ECO:0000256|PROSITE-ProRule:PRU00357}.
Interaction partners:
Sequence:
MDTQRLPKKEEEEEEDHLLSSTFESINGHSRDQHNHSIDDFESIFDITIDNLSCSNELTWDFWEEDEDEDVGEEEKRSSTDQEGSSFGFWENKPTDYEDKDLGLKLNLNHQEVIDAWSDHQKPLWTDTSTLDNSVYRGEVPVIEEKRNMRREASVLRYKEKRQSRLFSKKIRYQVRKLNADKRPRFKGRFVKRET
Protein: Acyl-CoA dehydrogenase FadE12 (EC 1.3.99.-) (Medium chain acyl-CoA dehydrogenase) (MCADH) (P9WQG3)
Organism: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Function: Has acyl-CoA dehydrogenase activity on a number of substrates. N-octanoyl-CoA is the best tested, but n-lauroyl-CoA, n-palmitoyl-CoA and isovaleryl-CoA were also used.
Interaction partners:
- Biotin-dependent 3-methylcrotonyl-coenzyme A carboxylase alpha1 subunit
- Probable biotin-dependent acyl-coenzyme A carboxylase beta2 subunit
- Probable acyl-CoA dehydrogenase FadE13
- Probable enoyl-CoA hydratase EchA7
- Exopolyphosphatase
- Probable fatty oxidation protein FadB
- Electron transfer flavoprotein subunit beta
- Electron transfer flavoprotein subunit alpha
- Enoyl-CoA hydratase EchA19
Sequence:
MTDTSFIESEERQALRKAVASWVANYGHEYYLDKARKHEHTSELWAEAGKLGFLGVNLPEEYGGGGAGMYELSLVMEEMAAAGSALLLMVVSPAINGTIIAKFGTDDQKKRWLPGIADGSLTMAFAITEPDAGSNSHKITTTARRDGSDWIIKGQKVFISGIDQAQAVLVVGRSEEAKTGKLRPALFVVPTDAPGFSYTPIEMELVSPERQFQVFLDDVRLPADALVGAEDAAIAQLFAGLNPERIMGAASAVGMGRFALGRAVDYVKTRKVWSTPIGAHQGLAHPLAQCHIEVELAKLMTQKAATLYDHGDDFGAAEAANMAKYAAAEASSRAVDQAVQSMGGNGLTKEYGVAAMMTSARLARIAPISREMVLNFVAQTSLGLPRSY
Protein: Aldo-keto reductase family 1 member B7 (EC 1.1.1.21) (Aldehyde reductase) (AR) (Aldose reductase-related protein 1) (MVDP) (Vas deferens androgen-dependent protein) (P21300)
Organism: Mus musculus (Mouse)
Function: Reduces a broad range of aliphatic and aromatic aldehydes to the corresponding alcohols. Reduces prostaglandins. May play a role in the metabolism of xenobiotic aromatic aldehydes (By similarity).
Subcellular location: Cytoplasm {ECO:0000250}.
Interaction partners:
- Sorbitol dehydrogenase
- Trans-1,2-dihydrobenzene-1,2-diol dehydrogenase
- L-xylulose reductase
- Tyrosine 3-monooxygenase
- glycerol kinase
- Dihydropteridine reductase
- Glycerol kinase 2
- Phenylalanine-4-hydroxylase
- Glycerol kinase
- Dihydrofolate reductase
Sequence:
MATFVELSTKAKMPLVGLGTWKSSPGQVKEAVKAAIDAGYRHIDCAYVYHNENEVGEAIQEKIKENAVKREDLFIVSKLWATFFEKSLVKKAFQNTLSDLKLDYLDLYLVHWPQGFQAGNALLPKDNKGKVLLSKSTFLDAWEAMEELVDQGLVKALGISNFNHFQIERLLNKPGLKHKPVTNQIESHPYLTQEKLIQYCQSKGIAVTAYSPLGSPDRPYAKPEDPVVMEIPKIKEIAAKHKKTVAQVLIRFHVQRNVVVIPKSVTPSRIQENLQVFDFQLSEEDMAAILSFNRNWRACDLLDARTEEDYPFHEEY
Protein: Chaperone protein DNAJ, putative (Q57VS0)
Organism: Trypanosoma brucei brucei (strain 927/4 GUTat10.1)
Interaction partners:
Sequence:
MSSGLTARRLILQQLTAVTQHIPLQARRTSGKGWWLSSFVRPEGDRRVFTLITEEEVAFLKRRCEEEGDEGRVILSTRPTRNIVRAVGGAALNITLSFLVSPLLALSVSLEAIRLRGLRPAALVIAPGVGLFWGAVFMAIAWYAAVQQMLLCGVHTLRAPIFYLFCPGCCWNELSCRYEYPSGVVGNSHPLLSLQAPPEKLFERAMKRETRRKRRGKRDVGYERKGGTHPSEGDDYYAILGVTRDATPQQIKEAYNRLALEIHPDRNPSQSAASQFDVLTKAYRVLGNAEKRRKYDMGGRSGVEDIGKKKRGAVRALFGGDALYAIVGDVKTGSFSQRVIDGLDWTQEELAIFRQRTLERCRDELLSVYLQPLRSEKDSKGAPALQELKGRLQRLLNTGLAREVLHAVGHEYMRVVLYGKASGPRERMTLYLNEAGPHRMRRRLDKWRHLCRIRQHTLRDSATMVDLAWYTSVEELESTARWVATSLLLDHQVPEEERRQRLEALQALAEIFITYGQSYKGANKQTMDALMNSLRDYYQQQKRGEGG
Protein: ELAV-like protein 1 (Hu-antigen R) (HuR) (Q15717)
Organism: Homo sapiens (Human)
Function: RNA-binding protein that binds to the 3'-UTR region of mRNAs and increases their stability. Involved in embryonic stem cell (ESC) differentiation: preferentially binds mRNAs that are not methylated by N6-methyladenosine (m6A), stabilizing them, promoting ESC differentiation (By similarity). Has also been shown to be capable of binding to m6A-containing mRNAs and contributes to MYC stability by binding to m6A-containing MYC mRNAs. Binds to poly-U elements and AU-rich elements (AREs) in the 3'-UTR of target mRNAs. Binds avidly to the AU-rich element in FOS and IL3/interleukin-3 mRNAs. In the case of the FOS AU-rich element, binds to a core element of 27 nucleotides that contain AUUUA, AUUUUA, and AUUUUUA motifs. Binds preferentially to the 5'-UUUU[AG]UUU-3' motif in vitro. With ZNF385A, binds the 3'-UTR of p53/TP53 mRNA to control their nuclear export induced by CDKN2A. Hence, may regulate p53/TP53 expression and mediate in part the CDKN2A anti-proliferative activity. May also bind with ZNF385A the CCNB1 mRNA (By similarity). Increases the stability of the leptin mRNA harboring an AU-rich element (ARE) in its 3' UTR.
Subcellular location: Cytoplasm {ECO:0000269|PubMed:14517288, ECO:0000269|PubMed:17632515, ECO:0000269|PubMed:18285462, ECO:0000269|PubMed:19029303}. Nucleus {ECO:0000269|PubMed:14517288, ECO:0000269|PubMed:17632515, ECO:0000269|PubMed:18285462}. Cytoplasm, Stress granule {ECO:0000250|UniProtKB:P70372}. Cytoplasm, P-body {ECO:0000269|PubMed:29476152}. Note=Translocates into the cytoplasm following phosphorylation by MAPKAPK2 (PubMed:14517288). Likewise, phosphorylation by PRKCD promotes translocation from the nucleus into the cytoplasm, where it is associated with free and cytoskeleton-bound polysomes (PubMed:18285462). Localizes to the stress granules in the presence of PLEKHN1 (By similarity). {ECO:0000250|UniProtKB:P70372, ECO:0000269|PubMed:14517288, ECO:0000269|PubMed:18285462}.
Interaction partners:
- Protein argonaute-2
- Polyadenylate-binding protein 2
- Ubiquitin-fold modifier-conjugating enzyme 1
- Insulin-like growth factor 2 mRNA-binding protein 1
- Heterogeneous nuclear ribonucleoproteins C1/C2
- Cytotoxic granule associated RNA binding protein TIA1
- Polypyrimidine tract-binding protein 1
- Nucleolysin TIAR
- Acidic leucine-rich nuclear phosphoprotein 32 family member A
- Heterogeneous nuclear ribonucleoprotein D0
Sequence:
MSNGYEDHMAEDCRGDIGRTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAINTLNGLRLQSKTIKVSYARPSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFAANPNQNKNVALLSQLYHSPARRFGGPVHHQAQRFRFSPMGVDHMSGLSGVNVPGNASSGWCIFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASLNGYRLGDKILQVSFKTNKSHK
Protein: Sodium/potassium-transporting ATPase subunit beta-1-interacting protein 2 (Na(+)/K(+)-transporting ATPase subunit beta-1-interacting protein 2) (T-cell lymphoma breakpoint-associated target protein 1) (Q4PNJ2)
Organism: Mus musculus (Mouse)
Subcellular location: Cell membrane {ECO:0000305}; Multi-pass membrane protein {ECO:0000305}.
Interaction partners:
Sequence:
MGYCSGRCTLIFICGMQLVCVLERQIFDFLGYQWAPILANFVHIIIVILGLFGTIQYRPRYVTGYAVWLVLWVTWNVFVICFYLEAGDLSKETDLILTFNISMHRSWWMENGPGCMVTSVTPAPDWAPEDHRYITVSGCFLDYQYIEVAHSSLQIVLALAGFIYACYVVRCITEEEDSFDFIGGFDSYGYQGPQKTSHLQLQPMYMSK
Protein: Proline-rich protein-1 (Q94G51)
Organism: Gossypium hirsutum (Upland cotton) (Gossypium mexicanum)
Interaction partners:
Sequence:
MMSTTHLLVFLLGVVTLTTPTFGTYESPNYGKPPTPVFKPPKVKPPPYEPKPPVYEPPKKEKPEPKPPVYAPPKKEKHGPKPTMYEPPKKEKPEPKPPVYTPPKKEVPKPKPPVYEPPKKEKPEPKPPIYTPPKKEKPEPKPPVYEPPKKEKPEPKPPVYTPPKKEKPEPKPPVYEPPKKPPMYEPKPPKPPVYTPPKKEKPEPKPPMYEPPKKPPMYEPKPPKPPVYTPPKKEKPEPKPPMYQPPNNPPIYEPKPPKPPVYAPPKEEKPKPKPPVYEPPAHEPPYGHYPGHPPLGKPQ
Protein: Golgi-associated RAB2 interactor protein 4 (Golgi-associated Rab2B interactor-like 4) (GARI-L4) (GARI-like 4) (Q8IYT1)
Organism: Homo sapiens (Human)
Function: RAB2B effector protein required for the compacted Golgi morphology, probably through interaction with small GTPase RAB2B.
Subcellular location: Golgi apparatus {ECO:0000269|PubMed:26209634}.
Interaction partners:
Sequence:
MNADFLLPYYTAQSGSSMSMFNTTMGKLQRQLYKGEYDIFKYAPIFESDFIQITKRGEVIDVHNRVRMVTMGIARTSPILPLPDVMLLARPATGCEEYAGHGQATKRKKRKAAKNLELTRLLPLRFVRISVQDHEKQQLRLKFATGRSCYLQLCPALDTRDDLFAYWEKLIYLLRPPMESNSSTCGIPAEDMMWMPVFQEDRRSLGAVNLQGKGDQDQVSIQSLHMVSEVCGATSAAYAGGEGLQNDFNKPTNVLNASIPKTSTELAEEPATGGIKEAAAAGAAAGAATGTVAGALSVAAANSAPGQVSAAIAGAATIGAGGNKGNMALAGTASMAPNSTKVAVAGAAGKSSEHVSSASMSLSREGSVSLAIAGVVLTSRTAAEADMDAAAGPPVSTRQSKSSLSGQHGRERTQASAEGCKEGRERREKDRALGRSSHRRRTGESRHKTRGDKIAQKSSSRSSFSHRANRDDKKEKGCGNPGSSRHRDSHKGVSHTPISKESRTSHKSGRSLWTTSSGSSKGLGRVSSFLRNVRANLTTKVVGTPHGRDVNVMAKMAERSTNVAIAETAEGGQGLETVGSMTPDIMETVTFEAH
Protein: WAPL domain-containing protein (H2KYI3)
Organism: Caenorhabditis elegans
Interaction partners:
Sequence:
MSSDDYESIDTPRVASLADMNRLPTQSRHSSYSTDDDEDVTPTPSASNSAPKNTILDPLQAQFLHPNSENSDIDEPRVQLREKKKATRAQDATVSHFLEDQVPNQKFKRRSAERHSMLAGAADFASRRSPFHLSGANGSGRWTDLFSSSRFKRKQRQKLNNVPSSSYSNNDYGTYAGTQSIGGFSIASNSSGESFALSGTEDEIREEFRKIMLDKGLPEADKIISNTPLDQMKMMIENSRKQDNQAKGRSPEWVVRVLGEILKTKNIPECKQDIVTVRVQLVGQGVSFLNKFAVEVHDESGRTGADLICCLYSLVLKRLRSSEVGSKYELDLIDFLQEIVRCVRTLINTHVGLVLVLRRNSPVYSLLIQTLCVLNRREQNDHEAAEIRAIRVDVVRTCYTLIFVQHDTLSTPIEMTGQQKMFMELSLIAKAESKRLNEPVSRFRPLISCIDFLESRDPKQGMYVLLMINMMINGVDRNISDDQMWTEETMWQARMRLRSEAAKDKLHKYIEKFTTSETVNSQIRDVAQNMLTEHNADLETLMGKLENVKGEYDTLDGCFELLAANSEATGTETVLLSILQLMTLTNEDMSTKRSYMKLIETAISDILLHRTPIDPQADYKFVFEVPVAEIIDKMQDEEMAKKVRQATSAKQEAVAMQGEYWKTLCDFQKEAEELRKHINDPKIPLPPPTKMNLSAPSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPVIPDYLPPKKVPKVDGPMRKFPWGAHTINPRDIPRESFWVGTNEEQLTSDRMFDRLRTKFATKPAANSGTLGGVLNSKKKVKTAQVIHDDKLLQKLGILQGSIKMSHSELKLAILEVNEKVLTVGFLEQLRSAMPVEKELIDKLRAVNKAQFEEMPEGEQFVTRLLQIQGLPLRLDLVLFKMRFSEVLNELKPAMSSVMEACEEVRASEGFRTFLKLVLATGNFMGGATKNYSSAYAFDMRMLTRLVDTKDVDNRHTLLHHLIEEMKRIDPRRARFALTDFHHCIESSRVNADEIRKTVQLTENNIKKLENCLKVYKIQGERDLFDEKMRPFHEKAVKEFSTVSSMCGKMKNDWESLVKYYAFNDKKYPMEEFFADIRTFSEQYSNAWKELDAEAEAKRKEAEFETQKRKQLQQSQQERKPLQERQAINRVPRTPAAMIRVSTAADKAGVLDELERATGNADFLQTLMSATNSRTPRSGLPARTRGGGRLGGGLDRQRSRHQNALGQLQDLTGCASEPVLSGQFARSRNVPQNDLQRQNMELPSSVKPTTALDRAKAFGVGLPIGQNELKVRVRRKGQPAVPNINGTSQISPTHKENDPTGSSSTSSGPASSNTATSSSSGTVVPSTDDLLARLNDF
Protein: Carotenoid cleavage dioxygenase 7, chloroplastic (AtCCD7) (AtNCED7) (Beta,beta-carotene 9',10'-oxygenase) (EC 1.13.11.68) (Protein MORE AXILLARY BRANCHING 3) (Protein MORE AXILLARY GROWTH 3) (Q7XJM2)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Involved in strigolactones biosynthesis by cleaving asymmetrically a variety of linear and cyclic carotenoids at the 9-10 double bond. Produces one C(13) beta-ionone and the C(27) 10'-apo-beta-carotenal. Strigolactones are hormones that inhibit tillering and shoot branching through the MAX-dependent pathway, contribute to the regulation of shoot architectural response to phosphate-limiting conditions and function as rhizosphere signal that stimulates hyphal branching of arbuscular mycorrhizal fungi and trigger seed germination of root parasitic weeds. No activity on lycopene, lutein, zeaxanthin, violaxanthin or neoxanthin. Probably not involved in abscisic acid biosynthesis.
Subcellular location: Plastid, chloroplast {ECO:0000269|PubMed:15268852, ECO:0000269|PubMed:16507088}.
Interaction partners:
- Beta-carotene isomerase D27, chloroplastic
- Carotenoid cleavage dioxygenase 8, chloroplastic
- Cytochrome P450 711A1
- F-box protein MAX2
- Protein RADIALIS-like 2
- Strigolactone esterase D14
- Protein RADIALIS-like 5
- Protein HEAT STRESS TOLERANT DWD 1
- Probable esterase KAI2
- Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD2
Sequence:
MSLPIPPKFLPPLKSPPIHHHQTPPPLAPPRAAISISIPDTGLGRTGTILDESTSSAFRDYQSLFVSQRSETIEPVVIKPIEGSIPVNFPSGTYYLAGPGLFTDDHGSTVHPLDGHGYLRAFHIDGNKRKATFTAKYVKTEAKKEEHDPVTDTWRFTHRGPFSVLKGGKRFGNTKVMKNVANTSVLKWAGRLLCLWEGGEPYEIESGSLDTVGRFNVENNGCESCDDDDSSDRDLSGHDIWDTAADLLKPILQGVFKMPPKRFLSHYKVDGRRKRLLTVTCNAEDMLLPRSNFTFCEYDSEFKLIQTKEFKIDDHMMIHDWAFTDTHYILFANRVKLNPIGSIAAMCGMSPMVSALSLNPSNESSPIYILPRFSDKYSRGGRDWRVPVEVSSQLWLIHSGNAYETREDNGDLKIQIQASACSYRWFDFQKMFGYDWQSNKLDPSVMNLNRGDDKLLPHLVKVSMTLDSTGNCNSCDVEPLNGWNKPSDFPVINSSWSGKKNKYMYSAASSGTRSELPHFPFDMVVKFDLDSNLVRTWSTGARRFVGEPMFVPKNSVEEGEEEDDGYIVVVEYAVSVERCYLVILDAKKIGESDAVVSRLEVPRNLTFPMGFHGLWASD
Protein: Nuclear factor of activated T-cells, cytoplasmic 1 (W5U9R6)
Organism: Ictalurus punctatus (Channel catfish) (Silurus punctatus)
Subcellular location: Cytoplasm {ECO:0000256|ARBA:ARBA00004496}. Nucleus {ECO:0000256|ARBA:ARBA00004123}.
Interaction partners:
- Calcineurin subunit B type 1
- Serine/threonine-protein phosphatase.
- Serine/threonine-protein phosphatase
- Serine/threonine-protein phosphatase
- Serine/threonine-protein phosphatase
- Serine/threonine-protein phosphatase
- Stress-activated protein kinase JNK
- Stress-activated protein kinase JNK
- Stress-activated protein kinase JNK
- Mitogen-activated protein kinase.
Sequence:
MPAPACTRPDSSANFTRPALGKRRGPELCCSAQFSMKSAEEEAFSYTPNVSLSLPLGMANPCLASQYHSLQSSPVISVSSCHQASYGLHESAMAPNYYFPGLRPNGAPPLERPRIEITTYGQMPEEEVEESGTMGPVAKRVNIVTLTLPSADGYRDPSSLSPASSCNSEASYESGFYNYENSPQNSPWQSPCVSPKGTSISMLSCPPHGHAPGPSPRHSPSTSPNDDIGSHGKRKYSFNGTPYGHASGISPNHSPGASPQGSPRLEENWLGTTNQYTNSAIVAAINALSTDGLPDLGDGVPNKSRKTSVEHNSSMSLKVEPANDDLGTDLGQEDYTNSNRMPFKKESYCSGFLDVPPHPYSWPKPKPYLSPSLPALDWQLPSCSGPYNLQIEVQPKSHHRAHYETEGSRGAVKAPSGGHPVVQLYGYMESEPLTLQLFIGTADDRLLRPHAFYQVHRITGKTVSTASHEAMQSNTKVLEIPLLPENNMRAIIDCAGILKLRNSDIELRKGETDIGRKNTRVRMVFRVHINQPNGRTVSLQAASNPIECSQRSAQELPMVDKQSLDSYPASGGKRMLLSGHNFLPESKVMFVEKAQDGHHVWETEANVDKDSRKSTSLVVEIPPYRNQRISSAVPVSFYVCNGKRKRSQYQRFTYLPCNVPMIKTEPADDYESRMSIHANPYFGQQRLPTMMPLDDPEPCMVASYAPCASRPTPMLCSSPSSSPKLHDLSPVPFPKCLSNSPTHSTMPGGMASMQDPPTHHGLALPSSPDPTSLAMHHPQGSPHLGSPSYHPLYPNSSPSSSPNSHPSTPGAATESPYLATFGSTQPGGSSPTLLADDHASPVLPVTIKQEPQELDQMYLDDVNEIIRNDLSCTSAHGHS
Protein: DND microRNA-mediated repression inhibitor 1 (D3ZQ06)
Organism: Rattus norvegicus (Rat)
Interaction partners:
Sequence:
MQSKRECEQWCERVNPENKAALEAWVRETGIRLVQVNGQRKYGGPPPGWVGSPPPSGSEVFIGRLPQDVYEHQLIPLFQRVGRLYEFRLMMTFSGLNRGFAYARYSSRRGAQAAIATLHNHQLRPSCQLLVCRSTEKCELTVDGLPLSLNRRALLLALQPLGPCLQETLLLPSPGSAPSQIALLKFSTHRAAAMAKKALVEGQSRLCGEQVAVEWLKPDLKQHFRQQLAGPSLRFLRPDVSQLAQTRDKLGSQGARAALQQLCQRMKLGCPVFLTKCLGTGPAGWHRFWYQVVIPGHPVPFSGLIWVVLTSDWQDGHEVAKDAVSAQLLETLSESRTSLWSPRAEAGSVVKQ
Protein: PRA1 family protein H (AtPRA1.H) (Q8LFP1)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: May be involved in both secretory and endocytic intracellular trafficking in the endosomal/prevacuolar compartments.
Subcellular location: Endoplasmic reticulum membrane {ECO:0000269|PubMed:18583532}; Multi-pass membrane protein {ECO:0000269|PubMed:18583532}.
Interaction partners:
- PRA1 family protein A2
- PRA1 family protein A3
- PRA1 family protein C
- PRA1 family protein G2
- PRA1 family protein E
- PRA1 family protein B5
- PRA1 family protein G1
- PRA1 family protein A1
- PRA1 family protein F3
- PRA1 family protein B1
Sequence:
MAFSPNPLSLSVPDPAFESWLRDSGYLELLDHRTSAAAAAASSSASVSSSAAATSAASDDVVSSITGGFFASLLSRLVTVSSLLTINPFSKLSADDFSGDTTPWTTGFIGNCDSYSFPSSSQQARMRVHENIKRFARNYATLFIVFFACALYQMPLALVGLLGSLALWELFKYCSDKWKFDRHPSMRKLSIGIGQCATAVLLTFLNVQMALFSALAISYSVMILHAGFRKLTPSKKPTRGR
Protein: L-arabonate dehydratase (EC 4.2.1.25) (L-arabinonate dehydratase) (Q1JUQ1)
Organism: Azospirillum brasilense
Function: Catalyzes the dehydration of L-arabonate to L-2-keto-3-deoxyarabonate (L-KDA). Is involved in a degradation pathway of L-arabinose that allows A.brasilense to grow on L-arabinose as a sole carbon source. To a lesser extent, can also use D-xylonate as substrate, but not D-galactonate, D-arabonate, and D-gluconate.
Interaction partners:
Sequence:
MSATKPRLRSTQWFGTNDKNGFMYRSWMKNQGIPDHEFDGRPIIGICNTWSELTPCNAHFRKLAEHVKRGISEAGGFPVEFPVFSNGESNLRPSAMLTRNLASMDVEEAIRGNPIDAVVLLAGCDKTTPALLMGAASCDVPAIVVSGGPMLNGKLEGKNIGSGTAVWQLHEALKAGEIDVHHFLSAEAGMSRSAGTCNTMGTASTMACMAEALGVALPHNAAIPAVDSRRYVLAHMSGIRIVEMALEGLVLSKILTRAAFENAIRANAAIGGSTNAVIHLKAIAGRIGVPLELEDWMRIGRDTPTIVDLMPSGRFPMEEFYYAGGLPAVLRRLGEGGLLPNPDALTVNGKSLWDNVREAPNYDEEVIRPLDRPLIADGGIRILRGNLAPRGAVLKPSAASPELLKHRGRAVVFENLDHYKATINDEALDIDASSVMVLKNCGPRGYPGMAEVGNMGLPPKLLRQGVKDMVRISDARMSGTAYGTVVLHVAPEAAAGGPLAAVRNGDWIELDCEAGTLHLDITDDELHRRLSDVDPTAAPGVAGQLGKGGYARLYIDHVLQADEGCDLDFLVGTRGAEVPSHSH
Protein: Glutaredoxin (Q9HY77)
Organism: Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Interaction partners:
- Morphogene protein BolA
- Glutaredoxin
- Fe/S biogenesis protein NfuA
- Iron-sulfur cluster assembly scaffold protein IscU
- Iron-sulfur cluster insertion protein ErpA
Sequence:
MDIIETIKEQIANNPILLYMKGSPNAPQCGFSSRAAQVLMACGEKFAYVDILQNPEIRANLPKYANWPTFPQLWVNGELVGGSDILAEMFEKGELQTLVKDAAAKANA
Protein: Uncharacterized N-acetyltransferase C56E4.07 (EC 2.3.1.-) (O14195)
Organism: Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Subcellular location: Golgi apparatus membrane {ECO:0000269|PubMed:16823372}; Peripheral membrane protein {ECO:0000269|PubMed:16823372}. Endoplasmic reticulum membrane {ECO:0000269|PubMed:16823372}; Peripheral membrane protein {ECO:0000269|PubMed:16823372}.
Interaction partners:
Sequence:
MVKTVNGEPLRHRPLQFNDIERVTEVSLLAFSDSATWKWRFKGMSSETMKALTMQLTRDAYFDPHVTCIVAYTDSNPYVGFLAFKKFPPDPNVSYRDWILKSLNKYYSNFLYWWYGAQIVQKRFHYNELQYGAALYKTGLLKNPKGFIHIHFVCVDPALQGNGVGGYLLDMAHDLADEYQIPCFLMASKMAFKMYEHLGYKTSVIANLVDEDTGELIRESPGMIREPKQPSSHET