wanglab/gogpt-training-data huggingface dataset:
Protein: Golgb1 protein (B7ZNF9)
Organism: Mus musculus (Mouse)
Interaction partners:
Sequence:
MLSRLSGLANNVLHELSGDYTDWNLMASSDADSSQETAMESNNRIMESTQEDALHRLAEAEKLVVELKDIISQKDVQLQQKDEALQEEKKAAENKIKKIKLHAKAKIMSLNKHMEEIKTQGGAALPPEAQAEELSKHNKSSTEEEMEIEKIKHELQEKEKLISSLQAQLDQSEQASQLDKSSAEMEDFVLMKQQLQEKEELISTLQTQLSQTQAEQAAQVVREKDARFETQVRLHEDELLQLVTQSDVETEMQQKLRVMQRKLEEHEEALLGRAQVVDLLQKELTSAEQRNQVLSQQLQLLEAEHNTLKNTMETERQESKTLMEKVELEVAERKLSFHNLQEEMHQLQGQLERAGQAQADLETQYSALQQRHKTEMEEKTACILSLQKNEQELQSACAALKEENSKLLQEKHDQAAESAQAMRQLEDQLQQKSKEISQFVNKPNLQKNETASQTSLPDVNNEGDQAVMEETVASLQKRVVELENEKGALLLSSGELEELKAENEKLSSRITLLEAQNRAGEADGTVCELKELKNLQQQYLQMSQEMTELRPLKAQLQESQDQTKALQVMEEELRQENLSWQHELRQLRMEKNSWELHERRMKEQFLMAISDKDQQLGHLQSLLRELRSSSQAQILSTQYQRQASPETSASLDGSQKLVYETELLRTQLNDSLKEIHQKELRIQQLNSKFSQLLEEKNVLSTQLSDASQSLRENQHHYSNLFNHCAILEKEVQKLQAGPLNTDVAPGAPQEKNGMHRKSEPETTGEEQPSFSEVQQQLCNTKQDLRELKKLLEEERDQRLTAENALSLAKEQIRRLEHSEWESARTPIMGACGSQEQALLIDLPGHSCRRTRSGAGWKRVLRSLCHSRTRVPLLAAIYFLMIHVLLVLCFTGHL
Protein: Baseplate hub protein pb3 (BHP-pb3) (Tail protein pb3) (Q6QGE9)
Organism: Escherichia phage T5 (Enterobacteria phage T5)
Function: Probable baseplate hub protein. May also form a part of the central straight fiber at the tail tip.
Subcellular location: Virion {ECO:0000269|PubMed:24198424, ECO:0000269|PubMed:36961893}. Note=Component of the tail (PubMed:24198424, PubMed:36961893). Located under the DTP-pb9 hexamer (PubMed:36961893). {ECO:0000269|PubMed:24198424, ECO:0000269|PubMed:36961893}.
Interaction partners:
Sequence:
MKKILDSAKNYLNTHDKLKTACLIALELPSSSGSAATYIYLTDYFRDVTYNGILYRSGKVKSISSHKQNRQLSIGSLSFTITGTAEDEVLKLVQNGVSFLDRGITIHQAIINEEGNILPVDPDTDGPLLFFRGRITGGGIKDNVNTSGIGTSVITWNCSNQFYDFDRVNGRYTDDASHRGLEVVNGTLQPSNGAKRPEYQEDYGFFHSNKSTTILAKYQVKEERYKLQSKKKLFGLSRSYSLKKYYETVTKEVDLDFNLAAKFIPVVYGVQKIPGIPIFADTELNNPNIVYVVYAFAEGEIDGFLDFYIGDSPMICFDETDSDTRTCFGRKKIVGDTMHRLAAGTSTSQPSVHGQEYKYNDGNGDIRIWTFHGKPDQTAAQVLVDIAKKKGFYLQNQNGNGPEYWDSRYKLLDTAYAIVRFTINENRTEIPEISAEVQGKKVKVYNSDGTIKADKTSLNGIWQLMDYLTSDRYGADITLDQFPLQKVISEAKILDIIDESYQTSWQPYWRYVGWNDPLSENRQIVQLNTILDTSESVFKNVQGILESFGGAINNLSGEYRITVEKYSTNPLRINFLDTYGDLDLSDTTGRNKFNSVQASLVDPALSWKTNSITFYNSKFKEQDKGLDKKLQLSFANITNYYTARSYADRELKKSRYSRTLSFSVPYKFIGIEPNDPIAFTYERYGWKDKFFLVDEVENTRDGKINLVLQEYGEDVFINSEQVDNSGNDIPDISNNVLPPRDFKYTPTPGGVVGAIGKNGELSWLPSLTNNVVYYSIAHSGHVNPYIVQQLENNPNERMIQEIIGEPAGLAIFELRAVDINGRRSSPVTLSVDLNSAKNLSVVSNFRVVNTASGDVTEFVGPDVKLAWDKIPEEEIIPEIYYTLEIYDSQDRMLRSVRIEDVYTYDYLLTYNKADFALLNSGALGINRKLRFRIRAEGENGEQSVGWATI
Protein: TNF receptor-associated protein 1 homolog, mitochondrial (TNFR-associated protein 1 homolog) (Trap1 homolog) (Q86L04)
Organism: Dictyostelium discoideum (Social amoeba)
Function: Chaperone that expresses an ATPase activity.
Subcellular location: Cytoplasm, cell cortex. Cytoplasm, cytoskeleton. Mitochondrion. Spore, perispore. Nucleus, nucleolus. Note=Localizes to the cortical actin cytoskeleton. Translocates to the mitochondrion during the prestarvation response and in response to differentiation. In prespore cells, colocalizes with grp94 in the prespore-specific vacuole. Found in the outermost layer of spore cell wall.
Interaction partners:
- Protein SGT1 homolog
- Strictosidine synthase family protein
- Luminal-binding protein 1
- CS domain-containing protein
- Activator of 90 kDa heat shock protein ATPase homolog
- Heat shock factor-type DNA-binding domain-containing protein
- RapGAP/RanGAP domain-containing protein
- Uncharacterized protein
- IWS1 family protein
- DEX1 C-terminal beta-sandwich domain-containing protein
Sequence:
MQRTLSKVILNSGKNNLLKSSNLLNSNLLKATTTNIIGIKTINNNNNVNSIIGFKSLNKRYFTSNTPKVEEEDDEIAPDEAIKAEEKIKETERVIGLSEKLSFQTETQKILHIVAESLYTEKEVFIRELISNASDAIEKVRHTQLTNASMIEDASIPFEIKISTDEDNKTLIIQDSGIGMTKDEMIKNLGKIGYSGSSDFIKKLGENPDKASIIGQFGVGFYSCFMVGHTIKIYTKSATPGSKGYLWESDGTGSYSITEAEGVSRGTKIIIHLKPSSYEYSKKSIVENIIKKYSNFVGFPIALNGTTVNTIKPLWTLNKNAISEEEHKEFYQFLSKSYDTPSYRVHFSTDTPLSIRSIFYIPSQHMEKYGMGKMEPGVSLFSRKVLIQQKANGILPEWMRFVRGVVDSEDIPLNVSREHLQDNGLIQRISSVLVKRILKHLNDEAKSDPEKFNVFMTEFGGFFKEGIITDFKWKDEISKLLRFESSNGSTASKTDAVSLEQYVSRMKPEQKNIYFLSVPNRAVGLSSPYYEPFQLKDIEVIFLYNAVDEFVLTNVGHFGDKKIVSVESKEAEEFLATNQDKKTETLSQDEIDKFLSWVSTVASDKVTQAKSTTRSISSPAIIIDHESANFRRMLKMVEPGKQHETPKQVVEFNMNHPIILKLVQQTESNPTIAKLVIDQVVDNAFVSAGLIEDNREMIPRINQLLDSLLTK
Protein: Eukaryotic translation initiation factor 3 subunit K (eIF3k) (Eukaryotic translation initiation factor 3 subunit 12) (Muscle-specific gene M9 protein) (PLAC-24) (eIF-3 p25) (eIF-3 p28) (Q9UBQ5)
Organism: Homo sapiens (Human)
Function: Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is required for several steps in the initiation of protein synthesis. The eIF-3 complex associates with the 40S ribosome and facilitates the recruitment of eIF-1, eIF-1A, eIF-2:GTP:methionyl-tRNAi and eIF-5 to form the 43S pre-initiation complex (43S PIC). The eIF-3 complex stimulates mRNA recruitment to the 43S PIC and scanning of the mRNA for AUG recognition. The eIF-3 complex is also required for disassembly and recycling of post-termination ribosomal complexes and subsequently prevents premature joining of the 40S and 60S ribosomal subunits prior to initiation. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation, including cell cycling, differentiation and apoptosis, and uses different modes of RNA stem-loop binding to exert either translational activation or repression.
Subcellular location: Nucleus {ECO:0000255|HAMAP-Rule:MF_03010, ECO:0000269|PubMed:15327989}. Cytoplasm {ECO:0000255|HAMAP-Rule:MF_03010, ECO:0000269|PubMed:15327989}.
Interaction partners:
- Eukaryotic translation initiation factor 3 subunit G
- Eukaryotic translation initiation factor 3 subunit H
- Eukaryotic translation initiation factor 3 subunit E
- Eukaryotic translation initiation factor 3 subunit M
- Eukaryotic translation initiation factor 3 subunit F
- Eukaryotic translation initiation factor 3 subunit J
- Eukaryotic translation initiation factor 3 subunit C
- Eukaryotic translation initiation factor 3 subunit D
- Eukaryotic translation initiation factor 3 subunit I
- Eukaryotic translation initiation factor 3 subunit B
Sequence:
MAMFEQMRANVGKLLKGIDRYNPENLATLERYVETQAKENAYDLEANLAVLKLYQFNPAFFQTTVTAQILLKALTNLPHTDFTLCKCMIDQAHQEERPIRQILYLGDLLETCHFQAFWQALDENMDLLEGITGFEDSVRKFICHVVGITYQHIDRWLLAEMLGDLSDSQLKVWMSKYGWSADESGQIFICSQEESIKPKNIVEKIDFDSVSSIMASSQ
Protein: Uncharacterized protein YddB (CDS103) (P31827)
Organism: Escherichia coli (strain K12)
Subcellular location: Cell outer membrane {ECO:0000255|PROSITE-ProRule:PRU01360}; Multi-pass membrane protein {ECO:0000255|PROSITE-ProRule:PRU01360}.
Interaction partners:
- Inner membrane ABC transporter ATP-binding protein YddA
- Probable zinc protease PqqL
Sequence:
MKRVLIPGVILCGADVAQAVDDKNMYMHFFEEMTVYAPVPVPVNGNTHYTSESIERLPTGNGNISDLLRTNPAVRMDSTQSTSLNQGDIRPEKISIHGASPYQNAYLIDGISATNNLNPANESDASSATNISGMSQGYYLDVSLLDNVTLYDSFVPVEFGRFNGGVIDAKIKRFNADDSKVKLGYRTTRSDWLTSHIDENNKSAFNQGSSGSTYYSPDFKKNFYTLSFNQELADNFGVTAGLSRRQSDITRADYVSNDGIVAGRAQYKNVIDTALSKFTWFASDRFTHDLTLKYTGSSRDYNTSTFPQSDREMGNKSYGLAWDMDTQLAWAKLRTTVGWDHISDYTRHDHDIWYTELSCTYGDITGRCTRGGLGHISQAVDNYTFKTRLDWQKFAVGNVSHQPYFGAEYIYSDAWTERHNQSESYVINAAGKKTNHTIYHKGKGRLGIDNYTLYMADRISWRNVSLMPGVRYDYDNYLSNHNISPRFMTEWDIFANQTSMITAGYNRYYGGNILDMGLRDIRNSWTESVSGNKTLTRYQDLKTPYNDELAMGLQQKIGKNVIARANYVYREAHDQISKSSRTDSATKTTITEYNNDGKTKTHSFSLSFELAEPLHIRQVDINPQIVFSYIKSKGNLSLNNGYEESNTGDNQVVYNGNLVSYDSVPVADFNNPLKISLNMDFTHQPSGLVWANTLAWQEARKARIILGKTNAQYISEYSDYKQYVDEKLDSSLTWDTRLSWTPQFLQQQNLTISADILNVLDSKTAVDTTNTGVATYASGRTFWLDVSMKF
Protein: E3 ubiquitin-protein ligase pellino homolog 2 (Pellino-2) (EC 2.3.2.27) (RING-type E3 ubiquitin transferase pellino homolog 2) (Q8BST6)
Organism: Mus musculus (Mouse)
Function: E3 ubiquitin ligase catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins. Involved in the TLR and IL-1 signaling pathways via interaction with the complex containing IRAK kinases and TRAF6. Mediates IL1B-induced IRAK1 'Lys-63'-linked polyubiquitination and possibly 'Lys-48'-linked ubiquitination. May be important for LPS- and IL1B-induced MAP3K7-dependent, but not MAP3K3-dependent, NF-kappa-B activation. Can activate the MAP (mitogen activated protein) kinase pathway leading to activation of ELK1.
Interaction partners:
- Interleukin-1 receptor-associated kinase 1
- Interleukin-1 receptor-associated kinase 4
- TNF receptor-associated factor 6
- Ubiquitin-conjugating enzyme E2 N
Sequence:
MFSPGQEEPSAPNKEPVKYRELVVLGYNGALPNGDRGRRKSRFALYKRTYASGVKPSTIHMVSTPQASKAISSRGHHSISYTLSRSQTVVVEYTHDKDTDMFQVGRSTESPIDFVVTDTVSGGQNEDAQITQSTISRFACRIVCDRNEPYTARIFAAGFDSSKNIFLGEKAAKWKNPDGHMDGLTTNGVLVMHPQGGFTEESQPGVWREISVCGDVYTLRETRSAQQRGKLVESETNVLQDGSLIDLCGATLLWRTADGLFHAPTQKHIEALRQEINAARPQCPVGLNTLAFPSINRKEVVEEKQPWAYLSCGHVHGYHSWGHRSDTEANERECPMCRTVGPYVPLWLGCEAGFYVDAGPPTHAFTPCGHVCSEKSAKYWSQIPLPHGTHAFHAACPFCATQLVGEQNCIKLIFQGPVD
Protein: Apical meristem formation protein-related (NAC (No Apical Meristem) domain transcriptional regulator superfamily protein) (T13D8.18 protein) (O80752)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Interaction partners:
- DNA replication ATP-dependent helicase/nuclease JHS1
Sequence:
MEDDDAAYDLIKHELLYSEDEVIISRYLKGMVVNGDSWPDHFIEDANVFTKNPDKVFNSERPRFVIVKPRTEACGKTDGCDSGCWRIIGRDKLIKSEETGKILGFKKILKFCLKRKPIDYKRSWVMEEYRLTNNLNWKQDHVICKIRFMFEAEISFLLSKHFYTTSESVLENELLPSYGYYLSNTQEEDEFYLDAIMTSEGNEWPSYVTNNVYCLHPLELVDLQDRMFNDYGTCIFANKTCGETDKCDGGYWKILHGDKLIKSNFGKVIGFKKVFEFYETVRQIYLCDGEEVTVTWTIQEYRLSKNVKQNKVLCVIKLTYDR
Protein: RING finger protein Z (Protein Z) (Zinc-binding protein) (Q6IUF9)
Organism: Machupo virus (MACV)
Function: Plays a crucial role in virion assembly and budding. Expressed late in the virus life cycle, it acts as an inhibitor of viral transcription and RNA synthesis by interacting with the viral polymerase L. Presumably recruits the NP encapsidated genome to cellular membranes at budding sites via direct interaction with NP. Plays critical roles in the final steps of viral release by interacting with host TSG101, a member of the vacuolar protein-sorting pathway and using other cellular host proteins involved in vesicle formation pathway. The budding of the virus progeny occurs after association of protein Z with the viral glycoprotein complex SSP-GP1-GP2 at the cell periphery, step that requires myristoylation of protein Z. Also selectively represses protein production by associating with host eIF4E.
Subcellular location: Virion {ECO:0000255|HAMAP-Rule:MF_04087}. Host cytoplasm, host perinuclear region {ECO:0000255|HAMAP-Rule:MF_04087}. Host cell membrane {ECO:0000255|HAMAP-Rule:MF_04087}; Lipid-anchor {ECO:0000255|HAMAP-Rule:MF_04087}; Cytoplasmic side {ECO:0000255|HAMAP-Rule:MF_04087}. Note=Mainly perinuclear. During budding, associates at the inner side of the plasma membrane of infected cells. {ECO:0000255|HAMAP-Rule:MF_04087}.
Interaction partners:
Sequence:
MGNCNKPPKRPPNTQTSAAQPSAEFRRTALPSLYGRYNCKCCWFADTNLITCNDHYLCLRCHQTMLRNSELCHICWKPLPTSITVPVEPSAPPP
Protein: Photosystem II reaction center protein Z (PSII-Z) (P73528)
Organism: Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
Function: Controls the interaction of photosystem II (PSII) cores with the light-harvesting antenna.
Subcellular location: Cellular thylakoid membrane {ECO:0000255|HAMAP-Rule:MF_00644, ECO:0000269|PubMed:12069591, ECO:0000269|PubMed:34937700}; Multi-pass membrane protein {ECO:0000255|HAMAP-Rule:MF_00644, ECO:0000269|PubMed:34937700}.
Interaction partners:
- Photosystem II CP43 reaction center protein
- Photosystem II reaction center protein K
- Photosystem II CP47 reaction center protein
- Photosystem II extrinsic protein V
- Photosystem II reaction center protein I
- Photosystem II reaction center protein J
- Photosystem II reaction center protein H
- Cytochrome b559 subunit beta
- Photosystem II reaction center protein X
- Cytochrome b559 subunit alpha
Sequence:
MSIVFQIALAALVLFSFVMVVGVPVAYASPQNWDRSKPLLYLGSGIWAILVIVVALLNFLVV
Protein: UL16-binding protein 3 (ALCAN-gamma) (NKG2D ligand 3) (N2DL-3) (NKG2DL3) (Retinoic acid early transcript 1N) (Q9BZM4)
Organism: Homo sapiens (Human)
Function: Binds and activates the KLRK1/NKG2D receptor, mediating natural killer cell cytotoxicity.
Subcellular location: Cell membrane {ECO:0000250|UniProtKB:Q9BZM6}; Lipid-anchor, GPI-anchor {ECO:0000250|UniProtKB:Q9BZM6}.
Interaction partners:
- NKG2-D type II integral membrane protein
- UL16-binding protein 1
- Hematopoietic cell signal transducer
- UL16-binding protein 2
- CD226 antigen
- Natural cytotoxicity triggering receptor 3
- Leukocyte immunoglobulin-like receptor subfamily B member 1
- Poliovirus receptor
- Beta-2-microglobulin
- C-C chemokine receptor type 8
Sequence:
MAAAASPAILPRLAILPYLLFDWSGTGRADAHSLWYNFTIIHLPRHGQQWCEVQSQVDQKNFLSYDCGSDKVLSMGHLEEQLYATDAWGKQLEMLREVGQRLRLELADTELEDFTPSGPLTLQVRMSCECEADGYIRGSWQFSFDGRKFLLFDSNNRKWTVVHAGARRMKEKWEKDSGLTTFFKMVSMRDCKSWLRDFLMHRKKRLEPTAPPTMAPGLAQPKAIATTLSPWSFLIILCFILPGI
Protein: AAA+ ATPase domain-containing protein (Q57Y55)
Organism: Trypanosoma brucei brucei (strain 927/4 GUTat10.1)
Interaction partners:
- Sister chromatid cohesion protein DCC1
- DNA polymerase epsilon catalytic subunit
- Replication factor C, subunit 3, putative
- Replication factor C, subunit 5, putative
- Replication factor C, subunit 4, putative
- Replication factor C, subunit 2, putative
- DNA polymerase
- Proliferating cell nuclear antigen
- DNA polymerase
- DNA polymerase II subunit 2
Sequence:
MMDIDCAEHNDVPKRDTNSHNNDYDIEDEFESIDESLLHGVPYAHDAAPELPDPPKPESAILMSKGVCLLPSCTRVNFMMRGDNGELRWLTASGLQEISGFSNPDDEASKEQRRREQEEEAIEAEGMRANALGLQKRVAGSGLGFVNVATLHRQIFNEDVEAAAVKDCGAVQPRQQEGEQRRGPLSEEDSLWVIKYTPKRFRDLLSDDTTNLKLLQWMKSWDEYTFRNGASPGADGLSSSPSTRPDDRIAVLVGPPGVGKTTLAHVLALHCGYEPIEINASVDRTASGIESAIQLAVSPGRSRRRVQRPAVPTSNGGNGGSATSLVDMLMLPKCLIIDEMDGIAANFASFLLKQDIHCPVLCLCNDYYVPSLRLLRQQCRLVFHVPPIRPQRLLQRLGEIAEHENIKVADAVLAELVRASNGDVRCCLNTLQFAYRCVVSDTGETPQQQHKRQQDLLREMQGKDMKLNLWDMWRVVLERQDRSKYVQLLRKEFAMNYDAVVMAGCANPLPLSSYQQTQQLQVDMDVAEEGYVATGFRVDPGYTYVSRVLQWCDDTNGLLDGLHEFYLRRSYTDYSFQNTCAVSDAFSFQDCLTTTGYRHTPLLPFAEQYGKSATATSCFSCCSAMGRGSSITASGFPRAAATAARRRDESFHITRMVRDNCRSLEVASHLYSTTAITEVVPSLLRCLCDVSLHIPSHTVASGVGLTPKDQQLLRAAVARHALYGFTYVRTTRGRPGNHRRGSDEPDHVAEEEEHWELDPPIHRICCASLSEAQQERMPGQRPAVRDTSSSSVMVLHMKEEVKQLLVGEIHRHIIQTSSLRAVRSHGGARKDNTGGTDEIVVKRDSTLPSRKRERDDEIDGREIKVKKEEEKFSGVPKPADGMHGTRTGVTVKREEDAAEMCGCSPQAEGPKAAVSAALSSSKPAQTVLKDFFGRPIAAKPKGMPLAFSKAKGENVVDLSNAGAHGRAKKLTVQYIYKEGCTNGVKIPASLNDF
Protein: Protein EURL homolog (Q9D7G4)
Organism: Mus musculus (Mouse)
Function: Plays a role in cortical progenitor cell proliferation and differentiation. Promotes dendritic spine development of post-migratory cortical projection neurons by modulating the beta-catenin signaling pathway.
Interaction partners:
Sequence:
MNEEEQFVSIDLNDDNICSVCKLGTDKDTLSFCHICFELNLEGVPKSNLLHTKSVRGHKDCFEKYHLIANQDCSRSKLSKSTYEGVKTIVSKKINWIVQYAQNKNLDLESECSKTSQHPLLNFRHKPEKKLLPQFDSQVPKYSAKGSAGNAGSISSYAQRILEHRENTDFRLGLLEDADALWTHSHSQAQKTEETSSGPEGTIQTQNPHYSREELNSMTLAEVVQLSAKLQQRIQEVFEELTHQVQEKDSLASELHVRHVAIEQLLKNCSKLPCLQVGRTGTRSHLPMNH
Protein: Cytochrome P450, putative (Eurofung) (C8VLL6)
Organism: Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) (Aspergillus nidulans)
Interaction partners:
Sequence:
MTISAETVLRLLPLTAGGAWVFFHLAKCIYNLFFHPLSHIPGPWLAAATYLPEFYHDVVRGGRYTTQIQQMHEKYGPIVRINPHELHCNDHRFINEIYAGGTRKRDKPVHQVTGSEAAAHATFSTTDHDVHRMRRNALAKFFSRAQVLRLEPTVRGLAERLCDKMLRTEKGRPFHVGAAYSQFTADVISGYCLGENLGLMGQEGWEEQIVDEVATVLRLGCTLRFVPWWKHVLGVVLLIRKQLVGSPKESSDALIVGMPNHIRKAQADIKIMDGKGNGNGPETIPTTVFTSLLQSDLPPQEKTFERMTSEGISLFAAGTATVSWALTVATYHLLTKPAILQRLTAEVSDLVNSSSCTEKVEWSALERLPYLGAVIQEALRLSYGVASRTARVATGEDLVYRGEWAHREVQYIIPRGSAIGMSAVLAHHDEAVFPDSHLFLPERWLDEKNQRLKELDRALLAFSKGSRGCLGINLAYCELYLLLALLVVRVFPRMRLYGTTEADVAYDHDFFNPFPVWESKGVRVVV
Protein: Ribosomal protein L37 (Q563Y1)
Organism: Taeniopygia guttata (Zebra finch) (Poephila guttata)
Interaction partners:
Sequence:
MTKGTSSFGKRRNKTHTLCRRCGSKAYHLQKSTCGKCGYPAKRKRKYNWSAKAKRRNTTGTGRMRHLKKVYRRFRNGFREGTTPKPKRAAVAASSSS
Protein: Pseudouridylate synthase 7 homolog (EC 5.4.99.-) (Q9VSK9)
Organism: Drosophila melanogaster (Fruit fly)
Function: Pseudouridylate synthase that catalyzes pseudouridylation of RNAs, such as tRNAs and mRNAs.
Interaction partners:
- Pseudouridylate synthase 1 homolog
- tRNA
- Putative tRNA pseudouridine synthase Pus10
- Pseudouridylate synthase RPUSD2
- Pseudouridylate synthase RPUSD2
- rRNA methyltransferase 3, mitochondrial
- Nucleolar complex protein 3
- Large ribosomal subunit protein uL15m
- GH02722p
- H/ACA ribonucleoprotein complex subunit 2
Sequence:
MGKDRGRGRRNNHSGPYNKSNWRGQKKDRPQNNGGGQRNSAPQQKSTLLETQVGITEFTNPEAPGFTGILKSRFSDFHVNEIDSNGKVLELNDLSVPKVAIVAVAENELDNWRKELEAVIGPEVWQDIANLAKAKNDPAIEQKVEIDVTTLDKEQRTQVHQMIKQLYKGKLLSTTIGQQQAKPKVQEEASLENKDAAEGETSTQKDSQVPAEEKKTIKVFKPKPGRGDKRWSFPADYVTFLVHKTNLVTSDVASTLAARLNLRPSQVNYSGIKDKRAKTTQKFSVKRRTPESILVAARSQRNVHIGNFGFESNTLKLGDLQGNRFRIALRHIAKEKREEIEQALQSLKERGFINYYGLQRFGNSASVPTYEVGVALLKHDYKLACELILKPRDSDVEFLRPIREEWWKNRDSAAAAAQIYGEKFIEKKLLDGLARFGESDYSSALRQIPRNMLMLYPHAYQSLIFNRIASRRIKEFGLKLIPGDLVYVEQDQSEASEEQAQQGEALEEQKEEEPNDEPLEVPEGDEAIEEESIFKRKVRPLTAEDIASGKYKLCDVVLPLPGHDITYPSNECGAWYEEMLAEVGLSSDQLKHKEKTYALAGAYRKMIISSSDLKWSFRMYNTPEDTLIASDWELLKNIPVAPEPAEAEANYMALLLEFSLPTAAYATMFLRELLKQDTSSASQTQLEKQAMAKEDNEKKAVGTQEEQMEVVKEVADEDGQETEQAETQGAEEAV
Protein: Aquaporin SIP1-1 (Small basic intrinsic protein 1-1) (AtSIP1;1) (Q9M8W5)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Water channel required to facilitate the transport of water across cell membrane.
Subcellular location: Endoplasmic reticulum membrane {ECO:0000269|PubMed:16223486}; Multi-pass membrane protein {ECO:0000269|PubMed:16223486}.
Interaction partners:
- Aquaporin NIP1-2
- Putative aquaporin NIP4-1
- Aquaporin NIP2-1
- Probable aquaporin TIP2-2
- Probable aquaporin NIP5-1
- Aquaporin TIP1-1
- Aquaporin TIP3-1
- Probable aquaporin NIP4-2
- Aquaporin PIP2-2
- Probable aquaporin PIP2-5
Sequence:
MMGVLKSAIGDMLMTFSWVVLSATFGIQTAAIISAGDFQAITWAPLVILTSLIFVYVSIFTVIFGSASFNPTGSAAFYVAGVPGDTLFSLAIRLPAQAIGAAGGALAIMEFIPEKYKHMIGGPSLQVDVHTGAIAETILSFGITFAVLLIILRGPRRLLAKTFLLALATISFVVAGSKYTGPAMNPAIAFGWAYMYSSHNTWDHIYVYWISSFVGALSAALLFRSIFPPPRPQKKKQKKA
Protein: Phenylalanine ammonia-lyase 2 (EC 4.3.1.24) (PoPAL2) (A0A4Y6HUD7)
Organism: Pleurotus ostreatus (Oyster mushroom) (White-rot fungus)
Function: Catalyzes the non-oxidative deamination of L-phenylalanine to form trans-cinnamic acid and a free ammonium ion. Facilitates the commitment step in phenylpropanoid pathways that produce secondary metabolites such as lignins, coumarins and flavonoids (By similarity).
Subcellular location: Cytoplasm {ECO:0000305}.
Interaction partners:
Sequence:
MTILSGTTAAPRVNGTTMNGHSKPHTNGVHLNGHAPKATTESPWPQSEEKTLLDKFVEAYYEFESYKSGQTVKVDGKTLSLAGVVAAARHHAKISLDDSASIKDKVVKSRKVIADKVASGASVYGLSTGFGGSADTRTDQPLSLGHALLQHQHVGVLPSSSQPLDVLPLSDPMSATSMPEAWVRAAMLIRMNSLIRGHSGVRWELIEKIAEIFDANITPVVPLRSSISASGDLSPLSYIAGTVVGNPSIRVFDGPAAFGAREMVPSAKALASHGIDPLPLASKEPLGILNGTAFSAAVGALALNEAVHFAMLAQVCTAMGTEALVGTRLSFEPFIHATCRPHPGQIEAARNIYNLLEGTTFASVHHEEVHIAEDQGTLRQDRYPLRTSPQFLGPQLEDILHAYVSVTQECNSTTDNPLIDGETGEIHHGGNFQAMAVTNAMEKTRLALHHIGKLLFAQCTELVNPAMNNGLPPSLAATDPSLNYHTKGIDIATAAYVSELGYLANPVSTHIQSAEMHNQAVNSLALISARATVNSLDVLSLLISSYLYILCQALDLRALQMEFVKGVEEIIREELSLLFASVVSPAELEALTSKVLSAAQTSLDTSGSMDAPARMKKMASTTTIPLFDFLTELTLPDAISSGIAMVSIPSFRSHLASRATALLDQLRRDYLSGQRGAAPASPYLNKTRMVYEFVRLTLGVKMHGSENYARFAKGLGVEDETIGQNISRIHEAIRDGKMQAITVAMFA
Protein: 7-dehydrocholesterol reductase (7-DHC reductase) (EC 1.3.1.21) (Cholesterol-5,6-epoxide hydrolase subunit DHCR7) (EC 3.3.2.11) (Sterol Delta(7)-reductase) (Q9Z2Z8)
Organism: Rattus norvegicus (Rat)
Function: 7-dehydrocholesterol reductase of the cholesterol biosynthetic pathway reducing the C7-C8 double bond of cholesta-5,7-dien-3beta-ol (7-dehydrocholesterol/7-DHC) and cholesta-5,7,24-trien-3beta-ol, two intermediates in that pathway.
Subcellular location: Endoplasmic reticulum membrane {ECO:0000250|UniProtKB:Q9UBM7}; Multi-pass membrane protein {ECO:0000255}.
Interaction partners:
- Lathosterol oxidase
- Delta
- Squalene monooxygenase
- Lanosterol 14-alpha demethylase
- Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating
- Cholesterol 25-hydroxylase
- 3-keto-steroid reductase/17-beta-hydroxysteroid dehydrogenase 7
- Lanosterol synthase
- Cytochrome P450 7A1
- Sterol O-acyltransferase 1
Sequence:
MASKSQHNASKAKNHNVKAESQGQWGRAWEVDWFSLVSVIFLLLFAPFIVYYFIMACDQYSCSLTAPILDVATGRASLADIWAKTPPVTAKAAQLYALWVSFQVLLYSWLPDFCHRFLPGYVGGVQEGAITPAGIVNKYEVNGLQAWLITHFLWFVNAYLLSWFSPTIIFDNWIPLLWCANILGYAVSTFAMIKGYLFPTSAEDCKFTGNFFYNYMMGIEFNPRIGKWFDFKLFFNGRPGIVAWTLINLSFAAKQQELYGHVTNSMILVNVLQAIYVLDFFWNETWYLKTIDICHDHFGWYLGWGDCVWLPYLYTLQGLYLVYHPVQLSTPNALGVLLLGLVGYYIFRMTNHQKDLFRRTDGHCLIWGKKPKAIECSYTSADGLKHRSKLLVSGFWGVARHFNYTGDLMGSLAYCLACGGGHLLPYFYIIYMTILLTHRCLRDEHRCANKYGRDWERYVAAVPYRLLPGIF
Protein: Adenylate isopentenyltransferase 3, chloroplastic (AtIPT3) (EC 2.5.1.112) (Adenylate dimethylallyltransferase 3) (Cytokinin synthase 3) (Q93WC9)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Involved in cytokinin biosynthesis. Catalyzes the transfer of an isopentenyl group from dimethylallyl diphosphate (DMAPP) to ATP and ADP.
Subcellular location: Plastid, chloroplast {ECO:0000269|PubMed:14726522}. Nucleus membrane {ECO:0000269|PubMed:18184738}; Lipid-anchor {ECO:0000269|PubMed:18184738}. Cytoplasm {ECO:0000269|PubMed:18184738}. Note=Farnesylation directs most of the protein to the nucleus/cytoplasm despite the presence of a chloroplast transit peptide (PubMed:18184738).
Interaction partners:
- Cytokinin hydroxylase
- Cytokinin hydroxylase
- Cytokinin dehydrogenase 1
- Isopentenyl-diphosphate Delta-isomerase II, chloroplastic
- Isopentenyl-diphosphate Delta-isomerase I, chloroplastic
- 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, chloroplastic
- Cytokinin dehydrogenase 5
- Cytokinin dehydrogenase 7
- Histidine kinase 4
- Cytokinin dehydrogenase 3
Sequence:
MIMKISMAMCKQPLPPSPTLDFPPARFGPNMLTLNPYGPKDKVVVIMGATGTGKSRLSVDIATRFRAEIINSDKIQVHQGLDIVTNKITSEESCGVPHHLLGVLPPEADLTAANYCHMANLSIESVLNRGKLPIIVGGSNSYVEALVDDKENKFRSRYDCCFLWVDVALPVLHGFVSERVDKMVESGMVEEVREFFDFSNSDYSRGIKKAIGFPEFDRFFRNEQFLNVEDREELLSKVLEEIKRNTFELACRQREKIERLRKVKKWSIQRVDATPVFTKRRSKMDANVAWERLVAGPSTDTVSRFLLDIASRRPLVEASTAVAAAMERELSRCLVA
Protein: Exostosin-2 (Q5U7A7)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Subcellular location: Endoplasmic reticulum membrane {ECO:0000256|ARBA:ARBA00004648}; Single-pass type II membrane protein {ECO:0000256|ARBA:ARBA00004648}.
Interaction partners:
Sequence:
MCASGKYGSRGPALIPRMKTKHRIYYITLFSVVLLGLIATGMFQFWPHSIESSAEWSLDRRSVHDAPLVRISVNSPIPGRGDLSCRMHTCFDVYRCGYNPKNKIKVYIYPLQRFVDEVGVPISSTGLSREYNDLLSAISDSDFYTDDVSRACLFVPSIDVLNQNSLRIRETAQALAMLPRWDKGMNHLLFNMLPGGPPDYNTALDVPRDRALLAGGGFSTWTYRQGYDVSIPVYSPLSAEVDLPERQPGPRRYFILSSQTAIHREYRVELERLKDENGEALLLLDKCSNLSQGLTSVRKRCYKGQVYDYPQILQESSFCVVLRGARLGQATLSDVLQAGCVPVIMADSYILPFSEVLDWKRASVVIPEEKLPEMYTILKSIPHRQVEEMQRQARWFWEAYFSSMKAIGMTTLQIINDRIYPYAAHTYEEWNNPPVVKWSSVNSPLFLPLIPPRSPGFTAVVLTYDRIESLFRVITEISKVPSLAKLLVVWNNQNKSPPEESLWPKVAVPLKVVRTKENKLSNRFFPFDEIETEAVLAIDDDIIMLTSDELQFGYEVWREFPDRLVGYPGRLHLWDHEMGKWKYESEWTNEVSMVLTGAAFYHKYFNYLYTYKMPGDIKNWVDAHMNCEDIAMNFLVANITGKAPIKVTPRKKFKCPECTAIDGLSLDQTHMVERSECINKFASVFGTMPLKVVEHRADPVLYKDDFPEKLKSFPNIGSL
Protein: Large ribosomal subunit protein bL21m (Q9VVX4)
Organism: Drosophila melanogaster (Fruit fly)
Interaction partners:
- Small ribosomal subunit protein uS3
- Large ribosomal subunit protein bL20m
- Elongation factor Ts, mitochondrial
- Large ribosomal subunit protein uL15m
- 40S ribosomal protein S15
- Large ribosomal subunit protein uL5
- Small ribosomal subunit protein bS16m
- Large ribosomal subunit protein uL13m
- Small ribosomal subunit protein uS9m
- Large ribosomal subunit protein uL29
Sequence:
MSFLAQTMRQMLRHVPNRSLLTAGAMRPLSISPVIGQQNKPATESVDLSAIAKDQQKECLSICERINRQVQKSEQGRLFAVVHLCGKQFKVTPGDIILVEGYWPPTIGDEISLDKVLLAGARDFTLVGRPILEPGLILVKATVVEKTLSHTKTHFRKKRRKQYMRINFQRSPHTMVRINSIELARPVDGNGEGESSSRRLF
Protein: Response regulator FrzZ (Q7BU54)
Organism: Myxococcus xanthus
Interaction partners:
Sequence:
ELTVRALTAAGYQASGAQDLASLELKLAEGPFSLILMDVNMPEMFGDDVVEYLRRQKKVTAKLVLYSDISEAELDGKTKASGADGYILKSGGLEAVLGGVMGLIGPPALSIPTAVPAPAAAPAAAPTPPPAPAAPAPAATGGLKPAPTTGGRKPRILIVDDSEMTARIIEADLVTKGFEVHVADTADKATKIILKKQTRPDLVLLDVRMPNVNGEQFCRFIKSNSLFKGIKVLLCSGENVEELQRICREAGADGYIPKDAVMGNLVAKELMPTGNE