wanglab/gogpt-training-data huggingface dataset:
Protein: Tapasin (TPN) (TPSN) (NGS-17) (TAP-associated protein) (TAP-binding protein) (O15533)
Organism: Homo sapiens (Human)
Function: Involved in the association of MHC class I with transporter associated with antigen processing (TAP) and in the assembly of MHC class I with peptide (peptide loading).
Subcellular location: Endoplasmic reticulum membrane {ECO:0000305}; Single-pass type I membrane protein {ECO:0000305}.
Interaction partners:
- Beta-2-microglobulin
- Protein disulfide-isomerase A3
- Calreticulin
- HLA class I histocompatibility antigen, A alpha chain
- HLA class I histocompatibility antigen, B alpha chain
- Calnexin
- Antigen peptide transporter 1
- Antigen peptide transporter 2
- HLA class I histocompatibility antigen, C alpha chain
- HLA class I histocompatibility antigen, alpha chain G
Sequence:
MKSLSLLLAVALGLATAVSAGPAVIECWFVEDASGKGLAKRPGALLLRQGPGEPPPRPDLDPELYLSVHDPAGALQAAFRRYPRGAPAPHCEMSRFVPLPASAKWASGLTPAQNCPRALDGAWLMVSISSPVLSLSSLLRPQPEPQQEPVLITMATVVLTVLTHTPAPRVRLGQDALLDLSFAYMPPTSEAASSLAPGPPPFGLEWRRQHLGKGHLLLAATPGLNGQMPAAQEGAVAFAAWDDDEPWGPWTGNGTFWLPTVQPFQEGTYLATIHLPYLQGQVTLELAVYKPPKVSLMPATLARAAPGEAPPELLCLVSHFYPSGGLEVEWELRGGPGGRSQKAEGQRWLSALRHHSDGSVSLSGHLQPPPVTTEQHGARYACRIHHPSLPASGRSAEVTLEVAGLSGPSLEDSVGLFLSAFLLLGLFKALGWAAVYLSTCKDSKKKAE
Protein: MAGUK p55 scaffold protein 4 (E7ET46)
Organism: Homo sapiens (Human)
Interaction partners:
Sequence:
MIQSDKGADPPDKKDMKLSTATNPQNGLSQILRLVLQELSLFYGRDVNGVCLLYDLLHSPWLQALLKIYDCLQEFKEKKLVPATPHAQVLSYEVVELLRETPTSPEIQELRQMLQAPHFKALLSAHDTIAQKDFEPLLPPLPDNIPESEEAMRIVCLVKNQQPLGATIKRHEMTGDILVARIIHGGLAERSGLLYAGDKLVEVNGVSVEGLDPEQVIHILAMSRGTIMFKVVPVSDPPVNSQQMVYVRAMTEYWPQEDPDIPCMDAGLPFQKGDILQIVDQNDALWWQARKISDPATCAGLVPSNHLLKRKQREFWWSQPYQPHTCLKSTLYEETFESDKEEFVGYGQKFFIAGFRRSMRLCRRKSHLSPLHASVCCTGSCYSAVGAPYEEVVRYQRRPSDKYRLIVLMGPSGVGVNELRRQLIEFNPSHFQSAVPHTTRTKKSYEMNGREYHYVSKETFENLIYSHRMLEYGEYKGHLYGTSVDAVQTVLVEGKICVMDLEPQDIQGVRTHELKPYVIFIKPSNMRCMKQSRKNAKVITDYYVDMKFKDEDLQEMENLAQRMETQFGQFFDHVIVNDSLHDACAQLLSAIQKAQEEPQWVPATWISSDTESQ
Protein: 16S rRNA processing protein RimM family (Q9FHG3)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Interaction partners:
- Glycine cleavage system H protein 3
- Acetyl-CoA carboxylase 2
- GTP binding protein-like
- ARM repeat superfamily protein
- Carbamoyl phosphate synthase arginine-specific large chain, chloroplastic
- BEACH domain-containing protein A2
- F3I6.5 protein
- Biotin carboxylase, chloroplastic
- Phosphoacetylglucosamine mutase
- Thylakoid lumenal P17.1 protein
Sequence:
MLRASLLCSSTSITFTPIQLFNPNSSHRFPRFELSRPVSALSRTKCHLSLLRARGKSSFLTRSTATDEAVETSSNSGLDLVEVGFLSGVHGLQGEICIKPNTDFPDLRFSKPGRRWLKQQLLGQDKIDEVELVEGRPHPAQKSWILKFRGLDDVDQVRQLVGATLLAEDDDRPELDEGEFYSRDLVGMRVLLKETGQLVGTVANIFDNGGNDLLHVLLDSSMEVCNGNAKTNQLVWIPFVDAIVPDVDLERKEMYITPPKGLLEVNMRADDRSKKERRQLEWKERKKQQKRLIAAKKKLCEMEQKHVFDGLRFGEKSQRNLLADHILNVNSTLLQKALQSIDTSSKRWNVTEEINALRARVSECNLSVSRECLSFDASKENMGDNFSFLQQGQNLFSEGKVSICLVLNDHENEEPEGENGVVSYLHALLDEEQRFIKEEDRACVPLVIVSPEHTIEALQKLFQDNDHFGFESEKIWILKEETLPVVCSSPEEPKKHKILMKSPWEILESPVGSGGVLSILASHGTTDSLSTLGINYLQVHSIETKPQPSQHYINPMLVGFVSARGAEIGIQVTEESELKNLEMTFSMKFLKRLKGKIEFEAVMKMNSHVQNVEKEWVESVPSEPNSFEFRSDIYRVLSECSSSAKICLMNITV
Protein: Early phosphoprotein p84 (Q6SW37)
Organism: Human cytomegalovirus (strain Merlin) (HHV-5) (Human herpesvirus 5)
Function: Needed for efficient replication. Recruits the DNA polymerase processivity factor to pre-replication foci.
Subcellular location: Host nucleus. Virion. Note=Found in subnuclear structures known as promyelocytic leukemia oncogenic domains (PODs) or nuclear domain 10 (ND10) during the early. {ECO:0000250|UniProtKB:P17151}.
Interaction partners:
Sequence:
MDLPTTVVRKYWTFTNPNRILHQSVNQTFDVRQFVFDNARLVNCVDGDGKVLHLNKGWLCATIMQHGEASAGAKTQQGFMSIDITGDGELQEHLFVRGGIVFNKSVSSVVGSSGPNESALLTMISENGNLQVTYVRHYLKNHGESSGGGGGCGAASTASAVCVSSLGGSGGTRDGPSAEEQQRRRQEQRHEERRKKSSSSAGGGGGGGASGGGGGGGSGGQHSSDSANGLLRDPRLMNRQKERRPPPSSENDGSPPLREAKRQKTTAQHEGHGGGGKNETEQQSGGAGGGGGGGSGRMSLPLDTSEAVAFLNYSSSSSAVSSSSNNHHHHHHHHNAVTDVAAGTDGALLLPIERGAVVSSPSSTSPSSLLSLPRPSSAHSAGETVQESEAAATAAAAGLMMMRRMRRAPAEAAEAPPQSEEENDSTTPVSNCRVPPNSQESAAPQPPRSPRFDDIIQSLTKMLNDCKEKRLCDLPLVSSRLLPETSGGTVVVNHSSVARTAAAVSTAGVGPPAVACPPLVTTGVVPSGSVAGVAPVAAAVETPAAPPRPVCEIKPYVVNPVVATAAAASNSSSSSSAPLPPPPPPPGGRRGRARNNTRGGGGGGGGGRNSRRQAASSSSSSSRRSRRRNNRHEDEDNDPLLRLSQVAGSGRRRGPSFLEDGLEIIDPSEEAAIAAASIAAFFDD
Protein: Beta-glucosidase 9 (AtBGLU9) (EC 3.2.1.21) (Q9STP4)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Interaction partners:
- Beta-glucosidase 10
- Beta-glucosidase 19
- Beta-glucosidase 33
- Beta-glucosidase 22
Sequence:
MKHFSLLFIFLVILLATSYSDAFTRNSFPKDFLFGAATSAYQWEGAVAEDGRTPSVWDTFSNSYDTGNGDVTSDGYHKYKEDVKLMATMGLESFRFSISWSRLIPNGRGLINPKGLLFYNNLIKDLKSHGIEPHVTLYHYDLPQSLEDEYGGWINRKIIEDFTAYADVCFREFGEDVKLWTTINEATIFAIGSYDQGTAPPGHCSPNKFVNCSTGNSSTEPYIAGHNILLAHASASKLYKLKYKSKQKGSIGLSIFAFGLSPYTNSKDDEIATQRAKTFLYGWMLKPLVFGDYPDEMKKTVGSRLPVFSEEESEQVKGSSDFIGIIHYTTFYVTNHQPSASLFPSMGEGFFKDMGVYIIPTGNSSFLVWEATPWGLEGILEYIKQSYNNPPVYILENGMPMVRDSTLQDTQRIEYIQAYIDAVLNAMKNGSDTRGYFVWSMVDVYEILSGYTTSFGMYHVNFSDPGRKRTPKLSASWYTGFLNGTIDVASQDTIQLWSNFSVSSSL
Protein: Transcription factor EAT1 (Basic helix-loop-helix protein 141) (OsbHLH141) (Protein DELAYED TAPETUM DEGENERATION) (Protein ETERNAL TAPETUM 1) (Q7X8R0)
Organism: Oryza sativa subsp. japonica (Rice)
Function: Transcription factor involved in the regulation of tapetum programmed cell death (PCD) and degradation during male reproductive development. Interacts with TDR and promote tapetal PCD by regulating the expression of RTS, and the two lipid-transfer proteins C4 and C6, which function in microspore development. Acts downstream from and interacts with TDR in the regulation of tapetal PCD. Regulates directly the aspartic protease AP25 and AP37 during tapetal PCD. May not target the cysteine protease CP1.
Subcellular location: Nucleus {ECO:0000255|PROSITE-ProRule:PRU00981, ECO:0000269|PubMed:23385589, ECO:0000269|PubMed:23519457}.
Interaction partners:
- Transcription factor UDT1
Sequence:
MIVGAGYFEDSHDQSLMAGSLIHDSNQAPASSENTSIDLQKFKVHPYSTEALSNTANLAEAARAINHLQHQLEIDLEQEVPPVETANWDPAICTIPDHIINHQFSEDPQNILVEQQIQQYDSALYPNGVYTPAPDLLNLMQCTMAPAFPATTSVFGDTTLNGTNYLDLNGELTGVAAVPDSGSGLMFASDSALQLGYHGTQSHLIKDICHSLPQNYGLFPSEDERDVIIGVGSGDLFQEIDDRQFDSVLECRRGKGEFGKGKGKANFATERERREQLNVKFRTLRMLFPNPTKNDRASIVGDAIEYIDELNRTVKELKILVEQKRHGNNRRKVLKLDQEAAADGESSSMRPVRDDQDNQLHGAIRSSWVQRRSKECHVDVRIVDDEVNIKLTEKKKANSLLHAAKVLDEFQLELIHVVGGIIGDHHIFMFNTKVSEGSAVYACAVAKKLLQAVDVQHQALDIFN
Protein: Putative aldehyde dehydrogenase-like protein C922.07c (EC 1.2.1.-) (Q9URW9)
Organism: Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Subcellular location: Cytoplasm {ECO:0000269|PubMed:16823372}. Nucleus {ECO:0000269|PubMed:16823372}.
Interaction partners:
- Probable acetyl-coenzyme A synthetase
- Alcohol dehydrogenase
- Probable pyruvate decarboxylase Pdc101
- Putative pyruvate decarboxylase C13A11.06
- Probable pyruvate decarboxylase C186.09
- Putative pyruvate decarboxylase C3G9.11c
- Alcohol dehydrogenase 4
- Probable S-
- 4-aminobutyrate aminotransferase
- Putative S-
Sequence:
MSEDLFVSINFPNGKSVKQPIGLYINGEWHKSAETWETVDPSIEEVIAKVYLAGEKEIDYAVKSAKEAFKTWKKVPGSEKGELLMKLAELTEKHADTLAAIEAMDSGKPLVSNARGDVDGTIALLRYCAGWADKIYGQVIPTGPEKLAYAKRTPIGVCGQIVPWNYPLNMAGWKIAPALAAGNCIIIKSAETTPLSLLYFATLVEEAGFPKGVVNIISGLGTVAGSYMAKHPGIDKIAFTGSTKVGVIVQQLAASNLKAVTLECGGKSPFLVFEDADLDQAVKWAALGIMYNSGQICTSNSRIYVQDSVYDKFIELFKKHVIQDYIVGMPFDDNTVVGPVVNKTQYNRIKNYIEQGKKEGAKLVLGDEPLPLKQGYFISPTIFADCSENMTIVKEEIFGPVVAISKFKTEDEAIEKANNTTYGLAAMCFTKDLERAHRVSDELEAGMVFINSTENSDIQAPFGGIKMSGIGNELGSNGIEMYTQIKAVHINFNNKL
Protein: Small ribosomal subunit protein uS2m (28S ribosomal protein S2, mitochondrial) (MRP-S2) (S2mt) (P82923)
Organism: Bos taurus (Bovine)
Function: Required for mitoribosome formation and stability, and mitochondrial translation.
Subcellular location: Mitochondrion {ECO:0000269|PubMed:11279123, ECO:0000269|PubMed:24799711}.
Interaction partners:
- Small ribosomal subunit protein mS22
- Small ribosomal subunit protein uS9m
- Small ribosomal subunit protein uS5m
- Small ribosomal subunit protein bS6m
- Small ribosomal subunit protein uS12m
- Small ribosomal subunit protein uS10m
- Small ribosomal subunit protein mS25
- Small ribosomal subunit protein mS23
- Small ribosomal subunit protein bS1m
- Small ribosomal subunit protein bS16m
Sequence:
MATGAVLPRLLGAGVRAAPRGRAAQRGRTLGSAAAAAAREPERDSDRSARILSEPLKHSDFFNVKELFSVRSLFNARVHLGHKAGCRHRFMEPYIFGSRLGQDIIDLEQTATHLQLALNFTAHVAFRGGIILFVSRARQFSHLIESTARSCGEYAHTRYFKGGLLTNAPLLLGARVRLPDLIIFLHTLNNVFEPHVAVRDAAKMSIPTVGVVDTNCNPCLITYPVPGNDDSPPAVQLFCQLFQTAVTRAKEKRRQLEALYRLQGAPGPHPANPAAPGAPSPGAQAQLGMGHSP
Protein: Major prion protein homolog (65-21 protein) (Acetylcholine receptor-inducing activity) (ARIA) (PR-LP) (P27177)
Organism: Gallus gallus (Chicken)
Function: Its primary physiological function is unclear. Has cytoprotective activity against internal or environmental stresses. May play a role in neuronal development and synaptic plasticity. May be required for neuronal myelin sheath maintenance. May play a role in iron uptake and iron homeostasis. Soluble oligomers are toxic to cultured neuroblastoma cells and induce apoptosis (in vitro). Association with GPC1 (via its heparan sulfate chains) targets PRNP to lipid rafts. Also provides Cu(2+) or Zn(2+) for the ascorbate-mediated GPC1 deaminase degradation of its heparan sulfate side chains (By similarity).
Subcellular location: Cell membrane; Lipid-anchor, GPI-anchor.
Interaction partners:
- Alpha-synuclein
- BPTI/Kunitz inhibitor domain-containing protein.
- Gap junction alpha-1 protein
- Polyadenylate-binding protein-interacting protein 2
- E3 ubiquitin-protein ligase HACE1
- Armadillo like helical domain containing 3.
- Shadow of prion protein
- TAR DNA-binding protein 43
- TPR_REGION domain-containing protein.
- Presenilin-1
Sequence:
MARLLTTCCLLALLLAACTDVALSKKGKGKPSGGGWGAGSHRQPSYPRQPGYPHNPGYPHNPGYPHNPGYPHNPGYPHNPGYPQNPGYPHNPGYPGWGQGYNPSSGGSYHNQKPWKPPKTNFKHVAGAAAAGAVVGGLGGYAMGRVMSGMNYHFDSPDEYRWWSENSARYPNRVYYRDYSSPVPQDVFVADCFNITVTEYSIGPAAKKNTSEAVAAANQTEVEMENKVVTKVIREMCVQQYREYRLASGIQLHPADTWLAVLLLLLTTLFAMH
Protein: 2-(3-amino-3-carboxypropyl)histidine synthase subunit 1 (EC 2.5.1.108) (Diphthamide biosynthesis protein 1) (Diphtheria toxin resistance protein 1) (S-adenosyl-L-methionine:L-histidine 3-amino-3-carboxypropyltransferase 1) (P40487)
Organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Function: Catalyzes the first step of diphthamide biosynthesis, a post-translational modification of histidine which occurs in elongation factor 2. In association with DPH2, transfers a 3-amino-3-carboxypropyl (ACP) group from S-adenosyl-L-methionine (SAM) to a histidine residue, the reaction is assisted by a reduction system comprising KTI11/DPH3 and a NADH-dependent reductase, predominantly CBR1.
Subcellular location: Cytoplasm {ECO:0000269|PubMed:14562095}.
Interaction partners:
- 2-
- Diphthamide biosynthesis protein 3
- Diphthine methyl ester synthase
- Elongation factor 2
- Diphthamide biosynthesis protein 4
- Diphthine--ammonia ligase
- Diphthine methyltransferase
- Protein KTI13
- NADH-cytochrome b5 reductase 1
- Elongator complex protein 3
Sequence:
MSGSTESKKQPRRRFIGRKSGNSNNDKLTTVAENGNEIIHKQKSRIALGRSVNHVPEDILNDKELNEAIKLLPSNYNFEIHKTVWNIRKYNAKRIALQMPEGLLIYSLIISDILEQFCGVETLVMGDVSYGACCIDDFTARALDCDFIVHYAHSCLVPIDVTKIKVLYVFVTINIQEDHIIKTLQKNFPKGSRIATFGTIQFNPAVHSVRDKLLNDEEHMLYIIPPQIKPLSRGEVLGCTSERLDKEQYDAMVFIGDGRFHLESAMIHNPEIPAFKYDPYNRKFTREGYDQKQLVEVRAEAIEVARKGKVFGLILGALGRQGNLNTVKNLEKNLIAAGKTVVKIILSEVFPQKLAMFDQIDVFVQVACPRLSIDWGYAFNKPLLTPYEASVLLKKDVMFSEKYYPMDYYEAKGYGRGETPKHAIE
Protein: Centrosomal protein 112 (A0A8I5ZYZ7)
Organism: Rattus norvegicus (Rat)
Interaction partners:
Sequence:
MRPLRDIGPSIPKENMIIAELQTTISSLKEESSRQQLAAERRLQDVIQKFEDEKQQLIRDNDQAIKALQDELETRSNQVRSAEKKLQHKELEAQEQMMYIRQEYETKFKGLMPASLRQELEDTISSLKSQVNFLQKRASILQEELTTYQSRR
Protein: Heterodisulfide reductase, iron-sulfur-binding subunit, putative (Q72DT0)
Organism: Nitratidesulfovibrio vulgaris (strain ATCC 29579 / DSM 644 / CCUG 34227 / NCIMB 8303 / VKM B-1760 / Hildenborough) (Desulfovibrio vulgaris)
Interaction partners:
- Heterodisulfide reductase, putative
- Heterodisulfide reductase, transmembrane subunit, putative
- Heterodisulfide reductase, B subunit
- Iron-sulfur cluster-binding protein
- Periplasmic [NiFe] hydrogenase large subunit
- Periplasmic [NiFe] hydrogenase large subunit
- Periplasmic [NiFe] hydrogenase large subunit
- Adenylyl-sulphate reductase, alpha subunit
- Uncharacterized protein
- Adenylylsulphate reductase, beta subunit
Sequence:
MASRIGVYFDQSSIGGGLDVEALSDGVSKKWGTLTPVVKVLPVLAAEKARDEIRADIEENELDGVLLCGTSPRVDWDLYKFDGVIVDRVNLREQCVLSYKNPDGSTVEEGDDAPELLVNLATDYLNMGVVRLQKTTAPEAAPVESVRRVLVLGGGWTGLTAARNASIAGLEVVLVEKGDVLGGKTLNLHQTIPLHAPYVEAHATGIEQKIADVESDANIKVLKGSVLTKLAGMPGEFTAIVKTPTGDEEIAVGAVVLATGWQPQDAKLLAPLGYGNVPNVVTSAEFEKMVKEGTMTARRVAFILNTSLCDGGDIYAPFCADEAAPAEAAAEAPAEGEEAGPKCKDLESIRHLPYSNSISSVVALKQANYVCDKFEGAQAFILYDSMVVQGIHERYYKAAQDRLGIMMSKADIREVREGANGTVSVLCDNTLIGDDIQIDVDMVVLPTGIVPSTAKDAIMNFEYRQGPGFPDLDLFDGFADSNYICFPYETRRTGVYAAGCVRQPMTLDSCEEDAIGAAMKAIQCIESANRGVAVHPRSGDLSYPIFNFVRCTQCKRCTEECPFGALDDDEKGTPKPNYSRCRRCGTCMGACPERVISFANYNIDQIGSMIREVNVPADMKKGGPRVIILACENDAYPALDMAALRGKPWSPYVRIIPVRCLGSVNAIWVADAMSKGIDGVMMLGCKYGDDYQCHFVKGSEICNRRKENIAETLNRLGVEPDRVEQYEVAIDEYDKLPGMIEGFMNMIFEKGPNPFKGY
Protein: peptidylprolyl isomerase (EC 5.2.1.8) (E5KN55)
Organism: Homo sapiens (Human)
Interaction partners:
Sequence:
MSHPSPQAKPSNPSNPRVFFDVDIGGERVGRIVLELFADIVPKTAENFRALCTGEKGIGHTTGKPLHFKGCPFHRIIKKFMIQGGDFSNQNGTGGESIYGEKFEDENFHYKHDREGLLSMANAGRNTNGSQFFITTVPTPHLDGKHVVFGQVIKGIGVARILENVEVKGEKPAKLCVIAECGELKEGDDGGIFPKDGSGDSHPDFPEDADIDLKDVDKILLITEDLKNIGNTFFKSQNWEMAIKKYAEVLRYVDSSKAVIETADRAKLQPIALSCVLNIGACKLKMSNWQGAIDSCLEALELDPSNTKALYRRAQGWQGLKEYDQALADLKKAQGIAPEDKAIQAELLKVKQKIKAQKDKEKAVYAKMFA
Protein: Transforming growth factor-beta receptor-associated protein 1 (TGF-beta receptor-associated protein 1) (TRAP-1) (TRAP1) (Q3UR70)
Organism: Mus musculus (Mouse)
Function: Plays a role in the TGF-beta/activin signaling pathway. It associates with inactive heteromeric TGF-beta and activin receptor complexes, mainly through the type II receptor, and is released upon activation of signaling. May recruit SMAD4 to the vicinity of the receptor complex and facilitate its interaction with receptor-regulated Smads, such as SMAD2 (By similarity).
Subcellular location: Cytoplasm. Early endosome {ECO:0000250|UniProtKB:Q8WUH2}. Note=Colocalizes with TGF-beta receptors in the absence of signaling. {ECO:0000250|UniProtKB:Q8WUH2}.
Interaction partners:
- Vacuolar protein sorting-associated protein 18 homolog
- Vacuolar protein sorting-associated protein 16 homolog
- Vacuolar protein sorting-associated protein 11 homolog
- Vacuolar protein sorting-associated protein 8 homolog
- Vacuolar protein sorting-associated protein 33A
- Vacuolar protein sorting-associated protein 41 homolog
- Vam6/Vps39-like protein
- Vacuolar protein sorting-associated protein 33B
- Vacuolar fusion protein CCZ1 homolog
- Synaptobrevin homolog YKT6
Sequence:
MMNIKAFTLVSAVERELLMGDRDHISIECVECCGRNLYVGTNDCFIYHFLLEEKAMPTGTATFVATKQLHRHLGFKKPVNELCAASALNRLLVLCDNSITLVNMLNLEPVPSGARIKGATTFAVNESPVNGDPFCVEVCIISVKRRTVQMFLVYEDRVQIVKEVSTPEQPLAVAVDGYFLCLALTTQYIILNYSTGLSQDLFPYCSEEKPPIVKRIGRQEFLLAGPGGLGMFATVAGISQRAPVHWSENVIGAAVCFPYVIALDDEFITVHSMLDQQQKQTLPFKEGHILQDFEGRVIVATSKGVYILVPLPLEKQIQDLLANRRVEEALVLAKGARRNIPKEKFQVMYRRILQQAGFIQFAQLQFLEAKELFRSSQLDVRELISLYPFLLPTSSSFTRSHPPLHEYADLNQLTQGDQEKMAKCKRFLMSYLNEIRSTEVANGYKEDIDTALLKLYAEADHDSLLDLLVTENFCLLTDSAAWLEKHKKYFALGLLYHYNKQDASAVQLWVNIVNGDIQDSTRSDLYEYIVDFLTYCLDQELVWTHADWLLQKSEEIGVQIFTKRPLDEQQQTSFNPDNIISSLKKYPKALVKYLEHLVIDRRLQKEEYHTHLAILYLEEVLRQRVSTGGKDVEATETQAKLRRLLQKSDLYRVHLLKEKVQGAGLPMESAILHGKLGEHEKALHILVHEMGDFSAAEDYCLWSSEGQGAACRQRLFHTLLAMYLRAGPSAQDLTVAAVDLLNHHAREFDVTQVLQLLPDTWSVQLLCPFLMGAMRDSIHARRTTQVALGLAKSENLIYMYDKMKLKGNAVRLSERELCQLCQNPFGEPVFVRYPNGGLVHTHCAASRHTAPSSPSPGTRT
Protein: Probable global transcription activator SNF2L2 (SWI/SNF-related, matrix-associated, actin-dependent regulator of chromatin, subfamily a, member 2) (Q1MTE3)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Subcellular location: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
Interaction partners:
- SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1
- SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
- Protein polybromo-1
- AT-rich interactive domain 2
- Actin-like 6A
- Actin-like 6B
- AT-rich interactive domain 1B
- PHD finger protein 10
- SWI/SNF complex subunit SMARCC1 isoform X1
- SWI/SNF-related, matrix-associated, actin-dependent regulator of chromatin, subfamily c, member 1b.
Sequence:
MATPNEPPVGMSHAGPSPGAGLSPGPILGPSPGPGPSPGSVHSMMGPSPGPPSVPHTMQGQGAGEYSQEMHPMHKPMEGMHEKAMADDIHYGQMKGVGMRSLHSGMGPPQSPMDQHSQGYMSPHPSPMGQVPEHVPSPMSGGGPTPPQMSQGQSPMMPMDPQGMGQQARGQSAFSPVQLQQLRAQILAYKILGRGQPLPENLQLAVQGKRSLPTMQQQPVNTGPFNRPPGMPMPHGGPASGQCLSPAMQTHTQSSGPKQWTEGQGAETSSTPQKLLISAPSGRPSPAPPLAPTGTQPVPSTSLTSQPQPQPPAGPGQPSLIIQLQQKQNRVTPIQKPQGLDPVELLQEREYRLQARIAHRIQELENLPGSLPPDLRTKATVELKALRLLNFQRQLRLDVVACMRRDTTLETALNSKAYKRSKRQTLREARMTEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSISGKIQKLSKAIATWHTNTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAYLLQQTDEYVANLTELVYEHKAAQAAKEKKKKRKKKKKEAGDAEGMGAIGPDGEPIDENSQMSELPVKVIQTETGKVLQGTDAPKSSQLEAWLEMNPGYEVAPRSDSEESGSDFEEEDDEEVVSRAESEEKKVIDPNSDEVSETAAKHIIESAKQDVDDEYSSQAGQTSSQSYYGVAHAVIERVDKQSTFLINGTLKQYQIQGLEWMVSLYNNNLNGILADEMGLGKTIQTIGLITYLMEHKRLNGPYLIIVPLSTLSNWVYELDKWAPSIVKIAYKGTPSMRRSLVPQLRSGKFNVLITTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSAIQKVLYRHMQGKGILLTDGSEKDKKGKGGAKTLMNTIMQLKKICNHPYMFQHIEESFAEHLGFPNGIISGPDLYRASGKFELLDRILPKLKATNHRVLLFCQMTSLMTILEDYFGYRNFLYLRLDGTTKSEDRAMLLKKFNEEGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQNMEEDEVPDDETLNQMIARNEDEFELFMRMDLDRRREDARNPKRKPRLMEEDELPSWILKDDAEVERLTCEEEEEKIFGRGSRHRRDVDYSDALTEKQWLRAIEDGNLEEIEEEIRLKRRKRRRHVDKDVRREDGDKAKKRRGRPPAEKLSPNPPKLTKQMNAIVDTVINYRDISGRQLSEVFVQLPSRKELPEYYELIRKPVDFKKIKERVRSHKYRSVSDLEKDVMLLCHNAQTYNLEGSQIYEDSIVLQSVFKSARQKITREESDDESDDDDEEDESEEESKSVKVKIKLSKRDERGQDKGKKRPSRGKAKPVVSDDDSDEDQEDNEQSEGSQSDDE
Protein: Formylglycine-generating enzyme (FGE) (sc-FGE) (EC 1.8.3.7) (Q9F3C7)
Organism: Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)
Function: Oxidase that catalyzes the conversion of cysteine to 3-oxoalanine on target proteins. 3-oxoalanine modification, which is also named formylglycine (fGly), occurs in the maturation of arylsulfatases and some alkaline phosphatases that use the hydrated form of 3-oxoalanine as a catalytic nucleophile.
Interaction partners:
- Sulfatase
- Histidine N-alpha-methyltransferase
- Glutamate--cysteine ligase EgtA
- Crp-family transcriptional regulator
- ABC-transport protein, membrane component
- Deaminase
- ABC-transport protein, ATP-binding component
Sequence:
MAVAAPSPAAAAEPGPAARPRSTRGQVRLPGGEFAMGDAFGEGYPADGETPVHTVRLRPFHIDETAVTNARFAAFVKATGHVTDAERFGSSAVFHLVVAAPDADVLGSAAGAPWWINVRGAHWRRPEGARSDITGRPNHPVVHVSWNDATAYARWAGKRLPTEAEWEYAARGGLAGRRYAWGDELTPGGRWRCNIWQGRFPHVNTAEDGHLSTAPVKSYRPNGHGLWNTAGNVWEWCSDWFSPTYYAESPTVDPHGPGTGAARVLRGGSYLCHDSYCNRYRVAARSSNTPDSSSGNLGFRCANDADLTSGSAAE
Protein: Paired box protein Pax-8 (XPax-8) (Q9PUK5)
Organism: Xenopus laevis (African clawed frog)
Function: Probable transcription factor. Involved in kidney development, acting synergistically with lhx1/lim-1 to establish the pronephric primordium in late gastrulae/early neurulae.
Subcellular location: Nucleus {ECO:0000250|UniProtKB:Q06710, ECO:0000255|PROSITE-ProRule:PRU00381}.
Interaction partners:
Sequence:
MPNSSIRSELTTERGFSGPASNFNIGHGGLNQLGGAFVNGRPLPEVVRQRIVDLAHQGVRPCDISRQLRVSHGCVSKILGRYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLTDGVCDNDTVPSVSSINRIIRTKVQQLFNLPMESCVKSLSPGQTLIPSSTVTPPESPHSDSLGSTYSISGLLGITQPSADGKRKLDDSDQESCRLSIDSQGSVGISRKQLRTEAYGHHPLDALECHFQRQHFPESYSSSTHSKTEQALYTLPLLNISLDDGKSSLTSTNTTIGRNLSTHQGYSALSEFTAFSIKQEASDSSSASSTPSSLCSPTFLDLQPINSGCSAPSFSAFSHPSVYGQFTSHVASGRDVVGATLPGYPPHIPSGQGNYASSAIAGMVAAGGDYSANAYSHGAYAAYGDSWRFPSSSLLGSPYYYSSGTRTAPPPTTAGAYDLM
Protein: Protein FATTY ACID EXPORT 4, chloroplastic (At-FAX4) (Q8LPG1)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: May be involved in free fatty acids export from the plastids.
Subcellular location: Plastid, chloroplast membrane {ECO:0000305}; Multi-pass membrane protein {ECO:0000305}.
Interaction partners:
- Protein FATTY ACID EXPORT 2, chloroplastic
- Protein FATTY ACID EXPORT 3, chloroplastic
- Protein FATTY ACID EXPORT 6
- Protein FATTY ACID EXPORT 1, chloroplastic
- Protein FATTY ACID EXPORT 7
- Protein FATTY ACID EXPORT 5
- ABC transporter A family member 9
- Protein TRIGALACTOSYLDIACYLGLYCEROL 5
Sequence:
MWSLALTLPSPSLVSVRSTKLGRSVSNGGRNWSGLTKLSEKSKTKRGNGLCCKAELSELAPVVSATYGVLLLGGGLFAYSKSGSKGSLFGGLTGSVLMASAYFLTKSPETRVLGDTIGLGAAFLFSSVFGFRLASSRKPVPAGPLLLLSIGMLSFFVMAYMHDSLPAISIPDPLPLP
Protein: UPF0301 protein YqgE (P0A8W5)
Organism: Escherichia coli (strain K12)
Interaction partners:
- Putative pre-16S rRNA nuclease
- Ribonucleoside-diphosphate reductase 1 subunit alpha
- Ribonucleoside-diphosphate reductase 2 subunit alpha
- Trifunctional NAD biosynthesis/regulator protein NadR
- Glutathione synthetase
- Thiol:disulfide interchange protein DsbE
- Beta sliding clamp
Sequence:
MNLQHHFLIAMPALQDPIFRRSVVYICEHNTNGAMGIIVNKPLENLKIEGILEKLKITPEPRDESIRLDKPVMLGGPLAEDRGFILHTPPSNFASSIRISDNTVMTTSRDVLETLGTDKQPSDVLVALGYASWEKGQLEQEILDNAWLTAPADLNILFKTPIADRWREAAKLIGVDILTMPGVAGHA
Protein: Syntaxin, Qa-SNARE family (O96189)
Organism: Plasmodium falciparum (isolate 3D7)
Subcellular location: Membrane {ECO:0000256|ARBA:ARBA00004211}; Single-pass type IV membrane protein {ECO:0000256|ARBA:ARBA00004211}.
Interaction partners:
- Kelch domain-containing protein, putative
- P1/s1 nuclease, putative
- ADP/ATP translocase
- Uncharacterized protein
- Cysteine proteinase falcipain 1
- non-specific serine/threonine protein kinase
- Uncharacterized protein
- Ribosome-interacting GTPase 1, putative
- DNA polymerase II subunit 2
- Raf kinase inhibitor
Sequence:
MIDLFDHLKSLGIKKNKGNAKNMIQWFIFKKDKIIDNTVDLNEETILNIDNEKKSDLRIYVDKVDSIKMEIKKIQKNVDEISCLKNKINISITVEQENELSIELNKLIKDTNDLINIIKIDIRNLRKKYVLRSKESFYIKKAIYDNVINIFKKSLHTYQDVQNIYHDGMKDKITRHIKIMYPNYSDEDISTFLNYDDINTQNLVKWKLQGHQDLKNALTDVETKYKDVKTLEKSVCDLHQTIIELSALIEMNDEIIDNIYDHVNDAQYFTEKANVDLIEARNIQKKTSKWMFYLTVTIIILILIIFFPIITKII
Protein: Uncharacterized protein, isoform A (Uncharacterized protein, isoform L (EC 1.1.1.29, EC 1.1.1.79, EC 1.1.1.81)) (Q9VIJ0)
Organism: Drosophila melanogaster (Fruit fly)
Interaction partners:
Sequence:
MRSIATNSLLPLIVALLIAGSNASLPRRGSRNQSQNRTMSAGKAFKVLVTHPEVPQEGIDLLKENCEIVQVQSVPINRAELLEKIRGVDGVLWGGHEPLNAEALDAAGPQLKSISTMSAGIDYVDVPEVKRRKIPLGHTPTVLNTAVADLAVGLLIAASRRFHEGRKTIDNDKWENYHLNWLLGQDIRDSTVGFYGFGGIGQAIAKRLSGFDIDKVLYTTRRRVHKEIEEEFNAKKVDFDTLLAESDFVVIASPLTKDTQGVFNATAFNKMKQTAVLVNIARGKIVNQDDLYEALKANRIFSAGLDVTDPEPLSPKDKLLTLDNVVVLPHIGSATKRTRADMSTIAAHNVLRGLAGEPMLSPAY
Protein: NMDA receptor 2, isoform G (X2JDW0)
Organism: Drosophila melanogaster (Fruit fly)
Subcellular location: Cell membrane {ECO:0000256|ARBA:ARBA00004651}; Multi-pass membrane protein {ECO:0000256|ARBA:ARBA00004651}. Postsynaptic cell membrane {ECO:0000256|ARBA:ARBA00034100}.
Interaction partners:
Sequence:
MMPSRVKLKRGTDGPTPTPTPMPTTMRKHTPIATLNTASCQHNSTTSRRKRILTPPSGPISLLLLTVLTLLILDTRSCQGLRLTNGGGSLSKGAAANKEQLNIGLIAPHTNFGKREYLRSINNAVTGLTKTRGAKLTFLKDYSFEQKNIHFDMMSLTPSPTAILSTLCKEFLRVNVSAILYMMNNEQFGHSTASAQYFLQLAGYLGIPVISWNADNSGLERRASQSTLQLQLAPSIEHQSAAMLSILERYKWHQFSVVTSQIAGHDDFVQAVRERVAEMQEHFKFTILNSIVVTRTSDLMELVNSEARVMLLYATQTEAITILRAAEEMKLTGENYVWVVSQSVIEKKDAHSQFPVGMLGVHFDTSSAALMNEISNAIKIYSYGVEAYLTDPANRDRRLTTQSLSCEDEGRGRWDNGEIFFKYLRNVSIEGDLNKPNIEFTADGDLRSAELKIMNLRPSANNKNLVWEEIGVWKSWETQKLDIRDIAWPGNSHAPPQGVPEKFHLKITFLEEAPYINLSPADPVSGKCLMDRGVLCRVAADHEMAADIDVGQAHRNESFYQCCSGFCIDLLEKFAEELGFTYELVRVEDGKWGTLENGKWNGLIADLVNRKTDMVLTSLMINTEREAVVDFSEPFMETGIAIVVAKRTGIISPTAFLEPFDTASWMLVGIVAIQAATFMIFLFEWLSPSGYDMKLYLQNTNVTPYRFSLFRTYWLVWAVLFQAAVHVDSPRGFTSRFMTNVWALFAVVFLAIYTANLAAFMITREEFHEFSGLNDSRLVHPFSHKPSFKFGTIPYSHTDSTIHKYFNVMHNYMRQYNKTSVADGVAAVLNGNLDSFIYDGTVLDYLVAQDEDCRLMTVGSWYAMTGYGLAFSRNSKYVQMFNKRLLEFRANGDLERLRRYWMTGTCRPGKQEHKSSDPLALEQFLSAFLLLMAGILLAALLLLLEHVYFKYIRKRLAKKDGGHCCALISLSMGKSLTFRGAVFEATEILKKHRCNDPICDTHLWKVKHELDMSRLRVRQLEKVMDKHGIKAPQLRLASSSDLLNHHHLKERPPLLGNLSLAASAQDLYRSYKTEIAEMETVL