wanglab/gogpt-training-data huggingface dataset:
Protein: Gamma-tubulin complex component 4 (GCP-4) (hGCP4) (Gamma-ring complex protein 76 kDa) (h76p) (hGrip76) (Q9UGJ1)
Organism: Homo sapiens (Human)
Function: Gamma-tubulin complex is necessary for microtubule nucleation at the centrosome.
Subcellular location: Cytoplasm, cytoskeleton, microtubule organizing center, centrosome.
Interaction partners:
- Gamma-tubulin complex component 6
- Gamma-tubulin complex component 5
- Mitotic-spindle organizing protein 1
- Gamma-tubulin complex component 3
- Gamma-tubulin complex component 2
- Tubulin gamma-1 chain
- Mitotic spindle organizing protein 2B
- Protein NEDD1
- Nucleoside diphosphate kinase homolog 7
- Mitotic-spindle organizing protein 2A
Sequence:
MIHELLLALSGYPGSIFTWNKRSGLQVSQDFPFLHPSETSVLNRLCRLGTDYIRFTEFIEQYTGHVQQQDHHPSQQGQGGLHGIYLRAFCTGLDSVLQPYRQALLDLEQEFLGDPHLSISHVNYFLDQFQLLFPSVMVVVEQIKSQKIHGCQILETVYKHSCGGLPPVRSALEKILAVCHGVMYKQLSAWMLHGLLLDQHEEFFIKQGPSSGNVSAQPEEDEEDLGIGGLTGKQLRELQDLRLIEEENMLAPSLKQFSLRVEILPSYIPVRVAEKILFVGESVQMFENQNVNLTRKGSILKNQEDTFAAELHRLKQQPLFSLVDFEQVVDRIRSTVAEHLWKLMVEESDLLGQLKIIKDFYLLGRGELFQAFIDTAQHMLKTPPTAVTEHDVNVAFQQSAHKVLLDDDNLLPLLHLTIEYHGKEHKADATQAREGPSRETSPREAPASGWAALGLSYKVQWPLHILFTPAVLEKYNVVFKYLLSVRRVQAELQHCWALQMQRKHLKSNQTDAIKWRLRNHMAFLVDNLQYYLQVDVLESQFSQLLHQINSTRDFESIRLAHDHFLSNLLAQSFILLKPVFHCLNEILDLCHSFCSLVSQNLGPLDERGAAQLSILVKGFSRQSSLLFKILSSVRNHQINSDLAQLLLRLDYNKYYTQAGGTLGSFGM
Protein: Small ribosomal subunit protein uS10m (37S ribosomal protein S10, mitochondrial) (O60186)
Organism: Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Function: Involved in mitochondrial genome encoded proteins translation. Involved in the binding of tRNA to the ribosomes (By similarity).
Subcellular location: Mitochondrion {ECO:0000269|PubMed:16823372}.
Interaction partners:
- Small ribosomal subunit protein uS9m
- Small ribosomal subunit protein bS16m
- Small ribosomal subunit protein uS15m
- Small ribosomal subunit protein uS5m
- Small ribosomal subunit protein bS6m
- Small ribosomal subunit protein uS2m
- Small ribosomal subunit protein uS11m
- Small ribosomal subunit protein uS14m
- Small ribosomal subunit protein mS35
- Small ribosomal subunit protein mS29
Sequence:
MKRYMFGTLPRVQPKRCFQTAIGKESPKGNSEKDQLFENPFFQQLPSNVAAVYLNPVKFNPSENDVLCASLKIKSFETPKLDTFTDFICRTAYYMKIPIKGPRPLPNKVESWTLLRSPFIHKSSQENFERITHSRLIQLYSVNPVTLETFFSYLRKCNMWDLKLQAKAYEYESIDDALKNFESQSKSTDNFKELLNGPSKKDIITQNAEKLLRNDPIYKDLLKNSSRK
Protein: Replication protein A 14 kDa subunit (OsRPA14) (Replication factor A protein 3) (Replication protein A 3) (Q9SDK9)
Organism: Oryza sativa subsp. japonica (Rice)
Function: As part of the replication protein A (RPA/RP-A), a single-stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.
Subcellular location: Nucleus {ECO:0000250}.
Interaction partners:
- Os08g0500200 protein
- RNA helicase
- COX assembly mitochondrial protein
- Pre-mRNA-processing factor 17
- Os02g0319800 protein
- Pre-mRNA-splicing factor SLU7
- Os12g0256300 protein
- Os12g0273980 protein
- Os11g0151600 protein
- Os04g0348300 protein
Sequence:
MDTSGPAAFVNGEILKMFVGRRVRTVVQAQREEGGLLIGQSTDGHQLTIKGASGAPMSHYVEIIGIAEPNQAIRAEVCTDFGENFDPAPFNGLCKLANGQMKDLFL
Protein: very-long-chain enoyl-CoA reductase (EC 1.3.1.93) (Q95R45)
Organism: Drosophila melanogaster (Fruit fly)
Subcellular location: Endoplasmic reticulum membrane {ECO:0000256|ARBA:ARBA00004477}; Multi-pass membrane protein {ECO:0000256|ARBA:ARBA00004477}.
Interaction partners:
Sequence:
TESKMELEILNAKNSKPYGKVKVPSGATPIGDLRALIHKTLKQTPHANRQSLRLELKGKSLKDTDTLESLSLRSGDKIYVKDLGPQIGWKTVFLAEYAGPLIVYLIFYFRPELVYGKAASLPISLTTHIAAGCYTVHYVKRLLETIFVHLFSHATMPLRNLFKNCTYYWGFTAYVSYHVNHPQFTSPCMCTVWGALGAFALCELGNFSVHIALRNLRPPGTKVRKIPVADGNPLTKLFDLVSCPNYTYEIGAWVSFSVLTSCLAAYLFAFAGAFQMTIWALAKHRNYKKEFKDYPRQRRSIFPFVL
Protein: At4g03260 (Outer arm dynein light chain 1 protein) (Q8GUJ5)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Interaction partners:
- Probable protein phosphatase 2C 74
- Probable protein S-acyltransferase 12
- N-acetylglucosaminyl transferase component family protein / Gpi1 family protein
- PLATZ transcription factor family protein
- At1g21000/F9H16_1
- DNA polymerase I A, chloroplastic/mitochondrial
- Protein phosphatase 1 regulatory subunit INH3
Sequence:
MVRFSCFNAHIHRHRPKKSVEGFSERVIKEDGSKSKGLSSIIFGRNIASVSENSKPAAVERVWKSEEIKPSGILEHGIGTHQVLHLKKSQSHGNELYLDGRDATENGTDDASDRITSPNSLEQQSGIHEAGSSKRVDESPNLYQQGPRASVSAYQGSNQALCGSIFSVGDLHHTDKDSRQLDDTSLYGEQMDNSNSQTPHDSPLMVRSNSLPNIADSSSEKSSPFKYSSHHSRSSDDLHALDTRQTDKSVHETDEEVKQEEDQDRDYDMHNSGDNNKENLVEDGYDDSYDYSSLAKDWIVPPTDELKLSKFLEGETTNQQAEFSGKDSKFKRIEDWVNDLQHVNLSEEADEITGYDDELPREPVVLNEQATSSAKVDAIKLTPGMEAAKKYISSLSASATTAQLVSHGLVVIPFLSAFVGLRVLNLSGNAIVRITAGALPRGLHALNLSKNSISVIEGLRELTRLRVLDLSYNRILRLGHGLASCSSLKELYLAGNKISEIEGLHRLLKLTVLDLRFNKFSTTKCLGQLAANYSSLQAISLEGNPAQKNVGDEQLRKYLLGLLPNLVYYNRQGTKDARLGTSTHQLDRGLRSELKNSSRKSSHGASSSHKPGSSTARKAPALQKRSKERRSRLPPVGHKLSPAAYENYHVATGDRLSSLRTELSMRRSRSEGTLGPI
Protein: Scube3 (Signal peptide, CUB domain, EGF-like 3) (F1R0I7)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Subcellular location: Secreted {ECO:0000256|ARBA:ARBA00004613}.
Interaction partners:
Sequence:
MRAGFGLFSVALVAFVQGPAGVFASRNPQDVDECAEALDSCSIDAICQNTLKSYKCICKSGYKGDGKHCEDIDECASEYNGGCVHECINIPGNYRCTCYDGFRLAHDGHNCLDVDECAEGNGGCQQICVNMMGSYECRCRDGFLLSDNQHTCIQRPKVRFNGTKDVATCMDKNHGCAHICRETPKGTIACECRPGFQLTKNNRDCKLTCNYGNGGCQHICEETDHGPKCSCHMKFALHSDGKTCVETCAVNNGGCDSTCHDAVTGVRCSCPVGFTLQPDRKTCKDIDECRMNNGGCDHVCRNTVGSFECSCKKGYKLLTNERTCQDIDECSFDRACDHTCINSPGSFQCYCHKGYVLYGVAHCGDIDECSINQGGCKSGCLNTLGSYECTCPPGYKLHWNKKDCVELIKCASNLVAPKATLACSKTGKKESCSLTCASKAHYLSESDSSYSVSCGISILRGKSQSRVNTSSIQSCIETQVHPVKQTASFRIKNAKCHLHPKHKGRAEDNGRQIGPGGQPCNNCLVTFVNLKCDSSKKTKGGRRARNPTNKEVTRITLELEAEVKPGDATGNCNMMCQRQHMEQQMKTYIKTLKKSINQERFLLRVAGLEYEVAQKLTQTALKQENCGPGREKDSGRCVRCLPGSYYHGEQERCIQCPPGTFQEREGQLACDLCPGGDRHGPQGARNITSCAGQCPPGHFSSDGFKPCQPCPLGKYQPDPGRTLCFSCGGGLSTKREGASSFNDCEVKVLCSPGHYYNTSVHRCIRCPHGTYQAEFRQNYCISCPGNTTTDFDGAISVSQCKNRECGGEIGEFIGYIESPNYPGNYPANVECVWTINPPHKRKILIVVPEIFLPSEDECGDVLVMRKNWSATSITTYETCQTYERPIAFTARSRRLWINFKSNDVNSARGFQIPYVTYDEDYEQLVEDIVRDGRLYASENHQEILKDKKLIKTLFDVLAHPHNYYKYSTRDSTEMLPRSFIRLIHSKVSAFLRPYN
Protein: Synaptonemal complex protein ZIP1 (P31111)
Organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Function: Required for meiotic chromosome synapsis and cell cycle progression. May act as a molecular zipper to bring homologous chromosomes in close apposition. ZIP1 may encode the transverse filaments of the synaptonemal complex.
Subcellular location: Nucleus. Chromosome. Note=Synapsed meiotic chromosomes.
Interaction partners:
- Protein ZIP2
- Meiotic recombination protein DMC1
- Protein RED1
- Pachytene checkpoint protein 2
- Chromosome stability protein 9
- Meiosis-specific serine/threonine-protein kinase MEK1
- Meiosis-specific protein HOP1
- Histone-lysine N-methyltransferase, H3 lysine-79 specific
- Meiosis-specific protein SPO11
- Meiosis-specific transcription factor NDT80
Sequence:
MSNFFRDSSMGFKPRPNIFAKLRVRDVDSDSSANTVVENSSNCLDVGSSIEGDDTFKKPHKTSTEQELITSMSLSQRNHGYSDDMEIGSPKKTTSTDQYNRILKNDVAAIENDTDEDFEITEVREVSEGVAKETKESHGDPNDSETTLKDSKMHEYTMTNGKAPLHTSINNSSTSSNDVLLEAFTNTQRICSNLKQELQKQQQDNAKLKVRLQSYASNSDKINEKVGKYKSCLETLQERIATLTSHKNNQETKLKDLRQNHQLYQRRISGFKTSIENLNKTINDLGKNKKEADAELMKKGKEIEYLKRELDDCSGQLSEEKIKNSSLIQEMGKNREEMIKSIENFFSEDKAHHLLQFNKFEERVHDLFEKKLQKHFDVAKDTLNVGLRNTTVELSSNTETMLKQQYEDIKENLEQKMSSSKDEMAKTINELSVTQKGLIMGVQEELLTSSGNIQTALVSEMNNTRQELLDDASQTAKNYASLENLVKAYKAEIVQSNEYEERIKHLESERSTLSSQKNQIISSLGTKEAQYEDLVKKLEAKNIEISQISGKEQSLTEKNENLSNELKKVQDQLEKLNNLNITTKSNYENKISSQNEIVKALVSENDTLKQRIQQLVEIKENEQKDHTTKLEAFQKNNEQLQKLNVEVVQLKAHELELEEQNRHLKNCLEKKETGVEESLSDVKTLKQQVIVLKSEKQDITAEKLELQDNLESLEEVTKNLQQKVQSQKRELEQKIKELEEIKNHKRNEPSKKGTQNFTKPSDSPKKNATTSNLFPNNSAAIHSPMKKCPKVDHISKSRINSSKETSKFNDEFDLSSSSNDDLELTNPSPIQIKPVRGKIKKGSNCMKPPISSRKKLLLVEDEDQSLKISKKRRRK
Protein: COP9 signalosome complex subunit 1 (Signalosome subunit 1) (Q9GS00)
Organism: Caenorhabditis elegans
Function: Essential component of the COP9 signalosome complex (CSN), a complex involved in various cellular and developmental processes. The CSN complex is an essential regulator of the ubiquitin (Ubl) conjugation pathway by mediating the deneddylation of the cullin subunits of the SCF-type E3 ligase complexes, leading to decrease the Ubl ligase activity of SCF. The CSN complex plays an essential role in embryogenesis and oogenesis and is required to regulate microtubule stability in the early embryo. Mediates mei-3/katanin targeting for degradation at the meiosis to mitosis transition via deneddylation of cul-3.
Subcellular location: Cytoplasm {ECO:0000269|PubMed:12781129}. Nucleus {ECO:0000269|PubMed:12781129}.
Interaction partners:
- COP9 signalosome complex subunit 5
- COP9 signalosome complex subunit 4
- COP9 signalosome complex subunit 2
- COP9 signalosome complex subunit 3
- COP9 signalosome complex subunit 6
- Ubiquitin-like protein NEDD8
- RING-box protein 1
- DNA damage-binding protein 1
- Uncharacterized protein
- Cullin-3
Sequence:
MQNELLDDPMDTGAPAAEAAAADEPLPPAHGIDREVTPKPAGNPDLMQQSLDNPAIPMHLIEKRDDRRESCDDGYSLTVNESAIDIESLACSYDSNAFFLRARFIARHCPILRADAYISLINYLKEHTTDITHYVAFFNELESELARKEFKNRQLNFQIPLRDQKWIEENGATWQSTTDQLQAEYKRHKDEGVKESTRRAMEDLFQHYMMAGKIDEAIRLYSRGIRDYCTQLKHSINMWINWMEVAICANDWGKLDTVTNTAYRSLKDADDAEKNSQQSQQAPPQRGENAPYMVERDPNAPIQTLTNRQLIETALAKCLAAQVLLKLRNKRYSQVVETILQIKTECLQSKWFVTSSDLGIYGMLSAMATMSRADLKLQVSGNGTFRKLLESEPQLIELLGSYTSSRFGRCFEIMRSVKPRLLLDPFISRNVDELFEKIRQKCVLQYLQPYSTIKMATMAEAVGMSSAELQLSLLELIEQKHVSLKIDQNEGIVRILDERDENAILKRVNVTCDRATQKAKSLLWKTTLAGANIHSISDKETRPKRKNQKESAKFDRNFGGIDVDEDPRGIAGPSGLSDDFNIAYDQQPQQQVQYLEDLGDI
Protein: Lysine-specific demethylase (EC 1.14.11.65) (M0RDF1)
Organism: Rattus norvegicus (Rat)
Subcellular location: Nucleus {ECO:0000256|ARBA:ARBA00004123, ECO:0000256|RuleBase:RU369087}.
Interaction partners:
- Lysine-specific demethylase 3A
- Peroxisome proliferator-activated receptor gamma
- cAMP-dependent protein kinase catalytic subunit beta
- cAMP-dependent protein kinase catalytic subunit alpha
- SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2
- YTH domain-containing protein 1
- SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
- SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3
- SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
- Lysine-specific demethylase 5A
Sequence:
MADAAASPVGKRLLLLFADPTASASASAPTAAAAVSGDPGPALRTRAWRAGTVRAMSGAVPQDLAIFVEFDGCNWKQHAWVKVHAEEVLALLLEGSLVWAPRKDPVLLQGTRVPVAQWPALMGTDVQNQILLEHAALRETVNALVSDQKLQEIFSRGPYSVQGHRVKVYQPEGEEAWLCGVVSRQDSISRLMEVSISETGEIKSVDPRLIHVMLMDNSTPQSEGGTIKAVKSSKGKKKRESIEGRDGRRRKSASDSGCDPATKKLKGDRGEVDSNGSDGGEASRGPWKGGNASGEPGLEQRAKQPPSTFAPQINRSIRFATYTKENGRTLVVQDEPVGGDRPVPFTPYASATGQTPLAPEVGGAENKEAGKTLEQVSQGMVASAAVVTTTSSTPTTVRISDTGLASGTGPEKQKGSWSQASGESSRSSSLASSGFGVSLSSLSQPLTFGSGRSQSNGVLATENKPLGFSLSRSSASESQKDSDLSKNLFFQCMSQNLPSSNYFTSGSEGVADDSSSRDSFRQSLESLSSGLGKGRPVLGADTKPGPKAGSSVDRKVPAESMPTLTPAFPRSLLNTRTPENHENLFLQPPKLSREEPSNPFLAFVEKVEHSPFSSFASQASGSSSSATTVTSKATPSWPESHSSADSASLAKKKPLFITTDSSKLVSGVLGSALSTGGPSLSAMGNGRSSSPTSSLTQPIEMPTLSSSPTEERPTVGPGQQDNPLLKTFSTVFGRHAGSFLSSPAEFAQENKAPFEAVKRFSLDERSLACRQDSDSSTNSDLSDLSDSEEQLQAKSGLKGPPEHLMGKLGPDGGRSAELLLGKGKGKQAPKGRPRTAPLKVGQSVLKDVSKVRKLKQSGEPFLQDGSCINVAPHLHKCRECRLERYRKFKEQEQDDSTVACRFFHFRRLVFTRKGVLRVEGFLSPQQSDPDAMNLWIPSSSLAEGIDLETSKYILANVGDQFCQLVMSEKEAMMMVEPHQKVAWKRAVRGVREMCDVCETTLFNIHWVCRKCGFGVCLDCYRLRKSRPRSETEEMGDEEVFSWLKCAKGQSHEPENLMPTQIIPGTALYNIGDMVHAARGKWGIKANCPCISRQSKSVLRPAVTNGISQLPSITPSASSGNETTFSSGGGTVATTNPEPEQAPKGAGADSRAEEPLKAEGSASNSNSELKAIRPPCPDTAPPSSALHWLADLATQKAKEETKDAGSLRSVLSKESHSPFGLDSLNSTAKGSPLTPKLFNSLLLGPTASNSKTEGSSLRDLLHSGPGKLPQTPLDTGIPFPPVFSSSSAGAKSKASLPNFLDHIIASVVENKKTSDSSKRSCNLTDTQKEVKEMVMGLNVLDPHTSHSWLCDGRLLCLHDPSNKNNWKIFRECWKQGQPVLVSGVHKKLKSELWKPEAFSQEFGDQDVDLVNCRNCAIISDVKVRDFWDGFEIICKRLRSEDGQPMVLKLKDWPPGEDFRDMMPTRFEDLMENLPLPEYTKRDGRLNLASRLPSYFVRPDLGPKMYNAYGLITAEDRRVGTTNLHLDVSDAVNVMVYVGIPIGEGAHDEEVLRTIDEGDADEVTKQRIHDGKEKPGALWHIYAAKDAEKIRELLRKVGEEQGQENPPDHDPIHDQSWYLDQILRKRLFEEYGVQGWAIVQFLGDAVFIPAGAPHQVHNLYSCIKVAEDFVSPEHVKHCFRLTQEFRHLSNTHTNHEDKLQVKNIIYHAVKDAVGTLKAHESKLARS
Protein: Putative rho GDP-dissociation inhibitor 2 (Q95UP9)
Organism: Dictyostelium discoideum (Social amoeba)
Function: Regulates the GDP/GTP exchange reaction of the Rho proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP to them.
Subcellular location: Cytoplasm {ECO:0000250}.
Interaction partners:
- Rho-related protein rac1A
- Rho-related protein racD
- Putative rho GDP-dissociation inhibitor 1
Sequence:
MINHNIISFKKFEAIFEQRPGGLELNMPIEIGSNNVDLTSKPFNIKGGSHYKVKIGYMASEPITDLICQIHTFRKSTPYGRDTQKVGDICANTNDLEFDFPKFGWEQASTQSSSMGDYTIKMYFKGNGNQDLATFFYSFNVAPDWENALPIN
Protein: Sodium-coupled monocarboxylate transporter 2 (Electroneutral sodium monocarboxylate cotransporter) (zSMCTn) (Low-affinity sodium-lactate cotransporter) (Solute carrier family 5 member 12) (zSLC5A12) (Q7T384)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Function: Acts as an electroneutral and low-affinity sodium (Na(+))-dependent sodium-coupled solute transporter. Catalyzes the transport across the plasma membrane of many monocarboxylates such as lactate, pyruvate, nicotinate, propionate, butyrate and beta-D-hydroxybutyrate.
Subcellular location: Apical cell membrane {ECO:0000250|UniProtKB:Q1EHB4}; Multi-pass membrane protein {ECO:0000250|UniProtKB:Q1EHB4}.
Interaction partners:
- Solute carrier family 25 member 47-A
- TAFA chemokine-like family member 1a.
- Solute carrier family 22 member 13
Sequence:
METVGRFQAGDYVVFACLFVVSSGIGVFFAIKERNKAPSKEFLVGGRQMSCGPVALSLTASFMSAVTVIGAPADVYRFGASYVIFGVAYTFVVFFTAELFLPVFYRSGITSTYEYLELRFCKLVRVAATLIYIIQTILYTGVVVYAPALALNQVTGFDLWGSIFATGIVCTFYCTLGGLKAVVWTDAFQMVVMVVGFLTVLIQGSSRAGGIENVWSTSRTGGRLQVFDFDVSPLRRHTFWTLSVGGTFTWLGIYGVNQSTIQRCISCKTEGHARWALYLNLLGLWIILFCAVVSGLIMYSYYSHCDPWSSGLISAPDQLMPYFVMEILGAFPGLPGLFVACAFSGTLSTVAASINALATVMYEDFVSQCFPDLSNRAASWISKALCVAFGVACTTMAVAASYMGGIVQAALSIHGMCGGPVLGLFSLGILFPFTNLKGAVGGLIVGISLSFWVGVGAFIYPAPSNNTHALELNTAGCNITAAAFEPTSATVTQLTSDRNWLADSWYSMSYLYYSAVGFIGTVAAGLLITLLTGPMDPKLLKPGMTRSVKEVMCFCTEKFTEADLGEGKEDVGDFGKAWEKHPDQGCTLRMDEKFRCSCDNQQENGNTNAGFDHNETSIVQKKL
Protein: Beta-carotene isomerase D27, chloroplastic (EC 5.2.1.14) (Protein DWARF-27 homolog) (AtD27) (Q7XA78)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Involved in strigolactones biosynthesis by catalyzing the isomerization of the C9-C10 double bond in all-trans-beta-carotene leading to 9-cis-beta-carotene and providing the substrate for CCD7. Strigolactones are hormones that inhibit tillering and shoot branching through the MAX-dependent pathway, contribute to the regulation of shoot architectural response to phosphate-limiting conditions and function as rhizosphere signal that stimulates hyphal branching of arbuscular mycorrhizal fungi and trigger seed germination of root parasitic weeds.
Subcellular location: Plastid, chloroplast {ECO:0000269|PubMed:22623516}.
Interaction partners:
- Carotenoid cleavage dioxygenase 7, chloroplastic
- Lycopene beta cyclase, chloroplastic
- Beta-carotene 3-hydroxylase 1, chloroplastic
- Beta-carotene 3-hydroxylase 2, chloroplastic
- Protein LUTEIN DEFICIENT 5, chloroplastic
- Carotenoid cleavage dioxygenase 8, chloroplastic
- Strigolactone esterase D14
- Cytochrome P450 711A1
- Protein RADIALIS-like 2
- F-box protein MAX2
Sequence:
MNTKLSLSQTKIFTFTTWFNDTRSGLDRRSSISPTLCSKPVYSGKLKAAKETARIETSNTKNASIEDSFFSKIAINYLSKNLQDAAGISSSSKSTDYDRLVDTATRVSRNFDTKQQHEFVLSSLDRALPTVISSLIKMAFPPSKVSRELFALFTTISFAWLVGPSEVRETEVNGRKEKSVVYIEKCRFLEQSNCVGMCTHICKIPSQIFIKNSLGMPIYMEPDFNDLSCKMMFGREPPEIEDDPAMKQPCFEFCKSNKSYGVKH
Protein: Cellulose synthase A catalytic subunit 9 [UDP-forming] (EC 2.4.1.12) (OsCesA9) (Q69P51)
Organism: Oryza sativa subsp. japonica (Rice)
Function: Catalytic subunit of cellulose synthase terminal complexes ('rosettes'), required for beta-1,4-glucan microfibril crystallization, a major mechanism of the cell wall formation (By similarity). Involved in the secondary cell wall formation.
Subcellular location: Cell membrane {ECO:0000305}; Multi-pass membrane protein {ECO:0000305}.
Interaction partners:
- Cellulose synthase A catalytic subunit 7
- Cellulose synthase A catalytic subunit 4
- Os01g0314700 protein
- Kinesin-like protein KIN-14I
Sequence:
MEASAGLVAGSHNRNELVLIRGHEEPKPLRALSGQVCEICGDEVGRTVDGDLFVACNECGFPVCRPCYEYERREGTQNCPQCKTRYKRLKGSPRVPGDEDEEDIDDLEHEFNIDDEKQKQLQQDQDGMQNSHITEAMLHGKMSYGRGPDDGDGNSTPLPPIITGARSVPVSGEFPISNSHGHGEFSSSLHKRIHPYPVSEPGSAKWDEKKEVSWKERMDDWKSKQGIVAGGAPDPDDYDADVPLNDEARQPLSRKVSIASSKVNPYRMVIILRLVVLGFFLRYRILHPVPDAIPLWLTSIICEIWFAVSWILDQFPKWYPIDRETYLDRLSLRYEREGEPSLLSAVDLFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGASMLTFESLSETAEFARKWVPFCKKFSIEPRAPEFYFSQKVDYLKDKVHPNFVQERRAMKREYEEFKVRINALVAKAQKVPAEGWIMKDGTPWPGNNTRDHPGMIQVFLGHSGGHDTEGNELPRLVYVSREKRPGFQHHKKAGAMNALIRVSAVLTNAPFMLNLDCDHYINNSKAIREAMCFLMDPQVGRKVCYVQFPQRFDGIDVHDRYANRNTVFFDINMKGLDGIQGPVYVGTGCVFRRQALYGYNPPKGPKRPKMVTCDCCPCFGRKKRKHGKDGLPEAVAADGGMDSDKEMLMSQMNFEKRFGQSAAFVTSTLMEEGGVPPSSSPAALLKEAIHVISCGYEDKTDWGLELGWIYGSITEDILTGFKMHCRGWRSVYCMPKRAAFKGSAPINLSDRLNQVLRWALGSVEIFFSRHSPLLYGYKNGNLKWLERFSYINTTIYPFTSLPLLAYCTLPAVCLLTGKFIMPPISTFASLFFIALFISIFATGILEMRWSGVSIEEWWRNEQFWVIGGVSAHLFAVVQGLLKVLAGIDTNFTVTSKATGDEDDEFAELYAFKWTTLLIPPTTLLILNIIGVVAGVSDAINNGSEAWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLLWVRIDPFTIKARGPDVRQCGINC
Protein: Uncharacterized HTH-type transcriptional regulator RhmR (P77732)
Organism: Escherichia coli (strain K12)
Interaction partners:
- L-rhamnonate dehydratase
- Inner membrane transport protein RhmT
- 2-keto-3-deoxy-L-rhamnonate aldolase
Sequence:
MLESSKVPALTRAIDILNLIARIGPCSAATIIDTLGIPKSTAYLLLNELRRQRFLSLDHQENFCLWTRLVELSGHALSKMDLRELARPRLTQLMDTTGLLCHLGIIDNGSAYYILKVESSATISVRSHEGKSLSLYRSGIGKCLLAWQPAAVQQSIIEGLVWEQATPTTITHPQQLHEELARIRRQGWSYDNGEDYADVRCVAAPVFNANNELTAAISVVGTRLQINEEYRDYLAGKAIACARDISRLLGWKSPFDLQAS
Protein: Proteasome subunit beta type-3-A (20S proteasome beta subunit C-1) (Proteasome component T) (Q9XI05)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Non-catalytic component of the proteasome, a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity.
Subcellular location: Cytoplasm {ECO:0000255|PROSITE-ProRule:PRU00809}. Nucleus {ECO:0000250}.
Interaction partners:
- Proteasome subunit beta type-6
- Proteasome subunit beta type-4
- Proteasome subunit alpha type-6-B
- Proteasome subunit alpha type-5-B
- Proteasome subunit alpha type-4-A
- Proteasome subunit alpha type-7-B
- Proteasome subunit alpha type-3
- Proteasome subunit alpha type-2-A
- Proteasome subunit alpha type-1-A
- Proteasome subunit beta type-2-B
Sequence:
MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRVFIGLSGLATDVQTLYQRLVFRHKLYQLREERDMKPETFASLVSAILYEKRFGPYLCQPVIAGLGDDDKPFICTMDSIGAKELAKDFVVSGTASESLYGACEAMYKPDMEAEELFETISQALLSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD
Protein: Chaperone protein DnaK (HSP70) (Heat shock 70 kDa protein) (Heat shock protein 70) (Q1G1L9)
Organism: Bifidobacterium bifidum
Interaction partners:
Sequence:
MARAVGIDLGTTNSCIATLEGGEPTVIVNAEGARTTPSVVAFSKSGEILVGEVAKRQAVTNVDRTISSVKRHMGTDWTVEIDGKKWTPQEISAQILMKLKRDAEAYLGEPVTDAVITCPAYFNDAQRQATKDAGKIAGLNVLRIINEPTAAALAYGLEKGKEDERILVFDLGGGTFDVSLLEIGKDDDGFSTIQVKATNGDNHLGGDDWDQKVIDWLVGEVKNKYGVDLSKDKIALQRLKEAAEQAKKELSSSTSTSINMQYLAMTPDGTPVHLDETLTRAHFEEMTSDLLGRCRTPFNNVLRDANISVSDIDHVVLVGGSTRMPAVKELVKELTGGKEANQSVNPDEVVAVGAAVQSGVIKGDRKDVLLIDVTPLSLGIETKGGIMTKLIDRNTAIPTKRSEVFSTAEDNQPSVLIQVYQGEREFARDNKPLGTFELTGIAPAPRGIPQIEVTFDIDANGIVHVSAKDKGTGKEQSMTITGGSGLPKDEIDRMVKEAEAHEAEDKKRKEDAETRNQAEAFAYQTEKLVNDNKDKISDEIAKEVTDKVNALKEALKGEDIEKIKSAQSELMTSAQKIGEALYAQQGAAGAADAAGAAAGASGAASNGGDDDVGAELLAHDDKK
Protein: nicotinamidase (EC 3.5.1.19) (Nicotinamide deamidase) (Q9N426)
Organism: Caenorhabditis elegans
Interaction partners:
- Nicotinate phosphoribosyltransferase
- Arginase
- 5-oxoprolinase
Sequence:
MFPCPKLIFPRLMAFIGLIWMVHSDNSATTNNNTILGNQSLEAIPEQLSELTGITVEESERIMESWLGNRQLDLRTSVLFDQEVLSRLRSLRVALLVVDFQNDFVDGSLKIGDGDAGQEPSSAITPLNELLQLSSWDLVVYTKDWHPHNHISFLSQAHNSDRVMDEKDENKTLGFFDSVQFLKPIKTEQVLYPDHCIQKSWGSDIHPEIYIADNAEYIMKGVDPYLDSYSAFNDNNGRSKTELEDLLRRENIDAVVIAGLAYDICVRFTCLDAVKQNFLAAVIPECSAGLTKKGIEESEMAFKKQGVAMISKDEARGITEGGFLPREWVQRIVKK
Protein: Microtubule cross-linking factor 2 (SOGA family member 1) (Suppressor of glucose by autophagy) (Suppressor of glucose, autophagy-associated protein 1) [Cleaved into: N-terminal form; C-terminal 80 kDa form (80-kDa SOGA fragment)] (E1U8D0)
Organism: Mus musculus (Mouse)
Function: Regulates autophagy by playing a role in the reduction of glucose production in an adiponectin- and insulin-dependent manner.
Subcellular location: [C-terminal 80 kDa form]: Secreted {ECO:0000269|PubMed:20813965}. Note=Secreted in primary hepatocyte-conditioned media. {ECO:0000269|PubMed:20813965}.; SUBCELLULAR LOCATION: Cytoplasm, cytoskeleton {ECO:0000269|PubMed:28550165, ECO:0000269|PubMed:35543016}. Golgi apparatus membrane {ECO:0000269|PubMed:35543016}. Midbody {ECO:0000250|UniProtKB:O94964}. Note=Co-localizes with CLASP2 in microtubules. {ECO:0000269|PubMed:28550165}.
Interaction partners:
Sequence:
METPAGESSARGYGPPPAPAPAAERKKSHRAPSPARPKDVAGWSLAKGRRGTGPGSATACGTASSARPDKKGRAVAPGTRGTGPRVAGVRTGVRAKGRPRPGTGPRPPPPPPSLTDSSSEVSDCASEEARQLGLELALSSDAESAAGGPAGTRTGQPPQPAQSGQQPPRPPASPDEPSVAASSVGSSRLPLSASLAFSDLTEEMLDCGPGGLVRELEELRSENDYLKDEIEELRAEMLEMRDVYMEEDVYQLQELRQQLDQASKTCRILQYRLRKAERRSLRAAQTGQVDGELIRGLEQDVKVSKDISMRLHKELEVVEKKRMRLEEENEGLRQRLIETELAKQVLQTELDRPREHSLKKRGTRSLGKTDKKPTAQEDSADLKCQLHFAKEESALMCKKLTKLAKENDSMKEELLKYRSLYGDLDAALSAEELADAPHSRETELKVHLKLVEEEANLLSRRIVELEVENRGLRAEMDDMKDHGGGGGPEARLAFSSLGGECGESLAELRRHLQFVEEEAELLRRSSAELEDQNKLLLNELAKYRSEHELDVTLSEDSCSVLSEPSQEELAAAKLQIGELSGKVKKLQYENRVLLSNLQRCDLASCQSTRPMLETDAEAGDSAQCVPAPLGETLEPHAARLCRAREAEALPGLREQAALVSKAIDVLVADANGFSVGLRLCLDNECADLRLHEAPDNSEGPRDAKLIHAILVRLSVLQQELNAFTRKADVALGSSGKEQPEPFPALPALGSQGPAKEIMLSKDLGSDFQPPDFRDLLEWEPRIREAFRTGDLESKPDPSRNFRPYRAEDNDSYASEIKDLQLVLAEAHDSLRGLQEQLSQERQLRKEEADSFNQKMVQLKEDQQRALLRREFELQSLSLQRRLEQKFWSQEKNILVQESQQFKHNFLLLFMKLRWFLKRWRQGKVLPSEEDDFLEVNSMKELYLLMEEEEMNAQHSDNKACTGESWTQNTPNECIKTLADMKVTLKELCWLLQDERRGLTELQQQFAKAKATWETERAELKGHASQMELKAGKGASERPGPDWKAALQREREEQQHLLAESYSAVMELTRQLQLSERHWSQEKLQLVERLQGEKQQVEQQVKELQNRLSQLQKAAEPWVLKHSDMEKQDNSWKEARSEKTHDKEGVSEAELGGTGLKRTKSVSSMSEFESLLDCSPYLAGGDARNKKLPNGPAFAFVSTEPVEPEKDAKEKAGLSTRDCSHIGSLACQEPAGRQMQRSYTAPDKTGIRVYYSPPVARRLGVPVVHDKEGKILIEPGFLFTTAKPKESAEADGLAESSYSRWLCNFSRQRLDGGSGASTSGSGPAFPALHDFEMSGNMSDDMKEITNCVRQAMRSGSLERKVKNTSSQTVGVATVGTQTIRTVSVGLQTDPPRSSLHSKSWSPRSSSLVSVRSKQISSSLDKVHSRIERPCCSPKYGSPKLQRRSVSKLDSTKDRSLWNLHQGKQNGSAWARSTTTRDSPVLRNINDGLSSLFSVVEHSGSTESVWKLGMSEARTKPEPPKYGIVQEFFRNVCGRAPSPTTAAGEESCKKPEPLSPASYHQPEGVSRILNKKAAKAGGSEEVRPTMLSQVGKDGILRDGDGSLILPSEDAVCDCSAQSLASCFIRPSRNTIRHSPSKCRLHPSESGWGGEERAAPQ
Protein: GmrSD restriction endonucleases C-terminal domain-containing protein (Q8NR02)
Organism: Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / BCRC 11384 / CCUG 27702 / LMG 3730 / NBRC 12168 / NCIMB 10025 / NRRL B-2784 / 534)
Interaction partners:
- Predicted extracellular nuclease
Sequence:
MARSQKRTPAIRSTKKVKSVISSIITIAVAAVAFAAYVIDGGVEEASGTPTSSESSVAATAPAASSETAAEYRAMLASLDVKGRAPGTGYDRELFGPAWTDTVSVEYGHNGCDTRNDILQRDLDDIQLREGTKDCIVTSGLLSDPFSGELIDFVRGERSGDVQIDHLVPLHDAWVKGAQQWDEQTRKNFANDPDNLLAVKGTLNQQKGAGDAATWLPPNTAFRCDYAKKIITVKDRYNVWVTEAEASALERQLDTCAA