wanglab/gogpt-training-data huggingface dataset:
Protein: Zinc finger protein 668 (Q8K2R5)
Organism: Mus musculus (Mouse)
Function: May be involved in transcriptional regulation.
Subcellular location: Nucleus {ECO:0000250|UniProtKB:Q96K58}.
Interaction partners:
Sequence:
MEVEATEARSPGPCYKRSGRRYKCLFCTKTFPNAPRAARHAATHTPTDCTEEVREAQPKVDTEPKAEEASGDKVSASVAKPRPYACPLCPKAYKTAPELRSHGRSHTGEKPFPCPECGRRFMQPVCLRVHLASHAGELPFRCTHCPKAYGTLSKLKIHQRGHTGERPYACPDCGKSFADPSVFRKHRRTHAGLRPYSCERCGKAYAELKDLRNHERSHTGERPFLCSECGKSFSRSSSLTCHQRIHAAQKPYRCPACGKGFTQLSSYQSHERTHSGEKPFLCPRCGRMFSDPSSFRRHQRAHEGVKPYRCEKCGKDFRQPADLAMHRRVHTGDRPFKCLQCDKTFVASWDLKRHALVHSGQRPFRCEECGRAFAERASLTKHSRMHSGERPFHCNACGKSFVVLSSLRKHERTHRSNETTGAAPQQELVLGLALPVGVVGEGSAAPVAGAGVGDAPAGLLGLPPESGGVVATQWQVVGMTVEHVECQDAGVGEAPSTLGDAGEVGGEETDEKPPQFVCRECKETFSTLTLLRRHERSHPELRPFPCTQCGKSFSDRAGLRKHSRTHSSVRPYSCSQCPKAFLSASDLRKHERTHPVPIGTPIPLEPLVALLGMPEEGSA
Protein: Prefoldin subunit 4 (Q2TBR6)
Organism: Bos taurus (Bovine)
Function: Binds specifically to cytosolic chaperonin (c-CPN) and transfers target proteins to it. Binds to nascent polypeptide chain and promotes folding in an environment in which there are many competing pathways for nonnative proteins (By similarity).
Subcellular location: Nucleus {ECO:0000250}. Cytoplasm {ECO:0000250}. Mitochondrion {ECO:0000250}.
Interaction partners:
- Prefoldin subunit 6
- Prefoldin subunit 5
- Prefoldin subunit 3
- Prefoldin subunit 2
- Prefoldin subunit 1
- T-complex protein 1 subunit delta
- DNA-directed RNA polymerases I, II, and III subunit RPABC4
- p53 and DNA damage-regulated protein 1
- T-complex protein 1 subunit eta
- Cysteine and histidine-rich domain-containing protein 1
Sequence:
MAATMKKAAAEDVNVTFEDQQKINKFARNTSRITELKEEIEVKKKQLQNLEDACEDIMLADDDCLMIPYQIGDVFISHSQEETQEMLEEAKKNLQEEIDALESRVESIQRVLADLKVQLYAKFGSNINLEADES
Protein: Nitrate/nitrite transporter NarU (Nitrite extrusion protein 2) (Nitrite facilitator 2) (P37758)
Organism: Escherichia coli (strain K12)
Function: Catalyzes nitrate uptake, nitrite uptake and nitrite export across the cytoplasmic membrane. May function as a nitrate/H(+) and nitrite/H(+) channel. Could confer a selective advantage during severe nutrient starvation or slow growth.
Subcellular location: Cell inner membrane {ECO:0000269|PubMed:15919996, ECO:0000269|PubMed:18691156}; Multi-pass membrane protein {ECO:0000269|PubMed:15919996, ECO:0000269|PubMed:18691156}.
Interaction partners:
- Respiratory nitrate reductase 2 beta chain
- Respiratory nitrate reductase 2 alpha chain
- Respiratory nitrate reductase 2 gamma chain
- Respiratory nitrate reductase 1 alpha chain
- Respiratory nitrate reductase 1 beta chain
- Respiratory nitrate reductase 1 gamma chain
- Probable nitrate reductase molybdenum cofactor assembly chaperone NarW
- Nitrite reductase large subunit
- Nitrite reductase small subunit
- Periplasmic nitrate reductase
Sequence:
MALQNEKNSRYLLRDWKPENPAFWENKGKHIARRNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILIIPCVWLGIAVQNPNTPFGIFIVIALLCGFAGANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSGMNDIASSRASIADQLPVLQRLHLWLLSLLYLATFGSFIGFSAGFAMLAKTQFPDVNILRLAFFGPFIGAIARSVGGAISDKFGGVRVTLINFIFMAIFSALLFLTLPGTGSGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDEQAHKEAVTETAAALGFISAIGAVGGFFIPQAFGMSLNMTGSPVGAMKVFLIFYIVCVLLTWLVYGRRKFSQK
Protein: Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8) (Polynucleotide phosphorylase) (PNPase) (P9WI57)
Organism: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Function: Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction.
Subcellular location: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_01595}.
Interaction partners:
- RNA helicase
- Ribonuclease E
- Transcription termination factor Rho
- Large ribosomal subunit protein uL3
- Large ribosomal subunit protein uL4
- Uncharacterized zinc protease Rv2782c
- Small ribosomal subunit protein bS1
- Translation initiation factor IF-2
- DNA-directed RNA polymerase subunit alpha
- DNA-directed RNA polymerase subunit beta
Sequence:
MSAAEIDEGVFETTATIDNGSFGTRTIRFETGRLALQAAGAVVAYLDDDNMLLSATTASKNPKEHFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVDGLRNEIQIVVTILSLDPGDLYDVLAINAASASTQLGGLPFSGPIGGVRVALIDGTWVGFPTVDQIERAVFDMVVAGRIVEGDVAIMMVEAEATENVVELVEGGAQAPTESVVAAGLEAAKPFIAALCTAQQELADAAGKSGKPTVDFPVFPDYGEDVYYSVSSVATDELAAALTIGGKAERDQRIDEIKTQVVQRLADTYEGREKEVGAALRALTKKLVRQRILTDHFRIDGRGITDIRALSAEVAVVPRAHGSALFERGETQILGVTTLDMIKMAQQIDSLGPETSKRYMHHYNFPPFSTGETGRVGSPKRREIGHGALAERALVPVLPSVEEFPYAIRQVSEALGSNGSTSMGSVCASTLALLNAGVPLKAPVAGIAMGLVSDDIQVEGAVDGVVERRFVTLTDILGAEDAFGDMDFKVAGTKDFVTALQLDTKLDGIPSQVLAGALEQAKDARLTILEVMAEAIDRPDEMSPYAPRVTTIKVPVDKIGEVIGPKGKVINAITEETGAQISIEDDGTVFVGATDGPSAQAAIDKINAIANPQLPTVGERFLGTVVKTTDFGAFVSLLPGRDGLVHISKLGKGKRIAKVEDVVNVGDKLRVEIADIDKRGKISLILVADEDSTAAATDAATVTS
Protein: ERCC4 domain-containing protein (G5EBZ1)
Organism: Caenorhabditis elegans
Subcellular location: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
Interaction partners:
- ERCC1-like central domain-containing protein
- XPA C-terminal domain-containing protein
- Crossover junction endonuclease MUS81
- SAP domain-containing protein
- RecQ-like DNA helicase blm-1
- DNA topoisomerase 3
- Structure-specific endonuclease subunit SLX1 homolog
- XPC
- DNA repair protein RAD51 homolog
- XPG
Sequence:
METETDDSETSLNDSFGNKDGLELLEYERATLAKTLPASVLFVVANGLGLERLFLEHLILFSDRRLLALVLNTNEHDESYFVSKLKEHNVECDPKVINSEVSIKDRQSIYLEGGVQFCSSRVLLVDLLQNRIPTDRIAAIFVYRAHQTLNAFQDSFILRLYREKKPDGTVKAFTDFPNSLSSLGQLQRLVDRLYIRHVELMPRFSSIIESELNRYQLKTAIFSVDVPTPLRRVHRTIIEFIKVCVRDLRTCSTSGKQTDEQNEEMIHVPWAATRLEKRLHDRRGHISEKQQRLLNDVASLREILQLSENMDVATVLSRLQVLKNDRTVLEEHSGWLLSPSFNRIMEDLLTIAGVTNGKADYKKFATPAKWTVLSEILREIKMLPVEKKDRGNDSPSVLVITSSEDLSRQVTDVVRYGINKMKWMTWRQLGYKSTQEMPEDEPLWDPDTISQLMRSSVDGESKSEVIANVQKTQKTTARAAQKRRKHAEELSGFSSDHRVQTNLIQFGILQYKRRKSGNEASTSQETTEWEVKEEMEEIEEITKNIGDLEAELVVSTTRERERYTLLKLLETKKPRAIVLYTMSLQTLRQIEIYRSTNPNRSLHVYWLQYTESTEESRYLESINRETMSFELLIREQGTLLISREFNVDREDAPRLKISTRDGGGARRDGAVDPRDQMDPEEELERPKIIVDMREFNSELPTVLYTKGYNVVATTIEIGDYILSPNIAIERKALDDLTQSLQSGRVFKQIEQMLEHYDCTVLLIESNRKFETKIVNGGPFQGELSRHCREIRSIFCSLIWANPKMRCVWTISPTNSAEFFSELKLSAPEPDVDRAISLKADQVECSSQELTDSEASTSTKAKKGKKWKPNPTVIRTLTQIFGIKASEAHNLLANSSIKTLADLFSLNITASHLSDFIPSTSADFIKDLSTFNFGRK
Protein: Mitochondrial phosphate carrier protein 3, mitochondrial (Mitochondrial phosphate transporter 3) (MPT3) (Phosphate transporter 3;1) (Q9FMU6)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Transport of phosphate groups from the cytosol to the mitochondrial matrix. Mediates salt stress tolerance through an ATP-dependent pathway and via modulation of the gibberellin metabolism.
Subcellular location: Mitochondrion inner membrane {ECO:0000269|PubMed:14671022}; Multi-pass membrane protein {ECO:0000269|PubMed:14671022}.
Interaction partners:
- Mitochondrial dicarboxylate/tricarboxylate transporter DTC
- ADP,ATP carrier protein 2, mitochondrial
- ADP,ATP carrier protein 1, mitochondrial
- Probable inorganic phosphate transporter 1-3
- Organic cation/carnitine transporter 5
- Cytochrome b-c1 complex subunit Rieske-1, mitochondrial
- MD-2-related lipid recognition domain-containing protein / ML domain-containing protein
- Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial
- ADP,ATP carrier protein 3, mitochondrial
- Cytochrome b-c1 complex subunit Rieske-2, mitochondrial
Sequence:
MESPKNSLIPSFLYSSSSSPRSFLLDQVLNSNSNAAFEKSPSPAPRSSPTSMISRKNFLIASPTEPGKGIEMYSPAFYAACTFGGILSCGLTHMTVTPLDLVKCNMQIDPAKYKSISSGFGILLKEQGVKGFFRGWVPTLLGYSAQGACKFGFYEYFKKTYSDLAGPEYTAKYKTLIYLAGSASAEIIADIALCPFEAVKVRVQTQPGFARGMSDGFPKFIKSEGYGGLYKGLAPLWGRQIPYTMMKFASFETIVEMIYKYAIPNPKSECSKGLQLGVSFAGGYVAGVFCAIVSHPADNLVSFLNNAKGATVGDAVKKIGMVGLFTRGLPLRIVMIGTLTGAQWGLYDAFKVFVGLPTTGGVAPAPAIAATEAKA
Protein: Candida glabrata strain CBS138 chromosome E complete sequence (Q6FV96)
Organism: Candida glabrata (strain ATCC 2001 / BCRC 20586 / JCM 3761 / NBRC 0622 / NRRL Y-65 / CBS 138) (Yeast) (Nakaseomyces glabratus)
Interaction partners:
- Candida glabrata strain CBS138 chromosome M complete sequence
- Candida glabrata strain CBS138 chromosome M complete sequence
- Candida glabrata strain CBS138 chromosome M complete sequence
- Candida glabrata strain CBS138 chromosome L complete sequence
- Candida glabrata strain CBS138 chromosome J complete sequence
- Candida glabrata strain CBS138 chromosome K complete sequence
- Candida glabrata strain CBS138 chromosome K complete sequence
- Candida glabrata strain CBS138 chromosome F complete sequence
- Candida glabrata strain CBS138 chromosome G complete sequence
- Candida glabrata strain CBS138 chromosome M complete sequence
Sequence:
MAVVKKKRYLSKSLKNGRAARVQRNRTEYAGINGSSLLSGSMELLEVDEESQSLVMGDDESVAEFEQRRLAAESMNAITHDESDTISFRNYLLANYLRGANYFNALTIHNVPVSRIKPPKLFQSPISLMELKKMIELQKAGIGKIKAVMDTWIKERESMVSTEHTKFYKSRMKVLDTDGLEGIHHVVKNIESRLGGRLQDRAYHLYDPEVFGTKFRGDMREAPEDYWEKYPELVKERKEKEAKMLREKEEEELRKKEEEERRKREEEEAKQRQQLEDDQLKRNQQPSETPSGALPLQITVPLSGAENSSGGHTPAPGMVTASMGNSSDIGLGTDQQPQPLPVTQEPLLNVASAQIPPQDQAQDIENVFGEYEAEPFNTGFDDEFADLDNVFF
Protein: Homeobox-leucine zipper protein ATHB-22 (HD-ZIP protein ATHB-22) (Homeodomain transcription factor ATHB-22) (Q4PSR7)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Probable transcription factor.
Subcellular location: Nucleus {ECO:0000305}.
Interaction partners:
- At2g18850
Sequence:
MEYWSSSFIDGASSSSFISPFYNFDHFSGNQDNRCLGTMMGAQQDILHVPLAMVESGYGEESNSFNGQEKKKKKMTSEQLKFLERSFQEEIKLNPDRKMKLNPDRKMKLSKELGLQPRQIAVWFQNRKARWKNKQLEHLYESLRQEFDIVSREKELLQEELIQLKSMIREDSSCKKKQTWEKACS
Protein: Male development gene 1 (Q8I5P2)
Organism: Plasmodium falciparum (isolate 3D7)
Interaction partners:
Sequence:
MKYPNFFILKVFYFLFFYLSFEDIYYHCINIGKPQVNTNGKNVNSNEKANNLSTEWSNRGFNFMDLLKNGYLQSHGNLEEVKDELANELANKIQNKIGEYLKDEKNLSVLQHLQLEDLDDLKHYVKDVSEYIGAKAGDLLDENLESTLKPLLERKSFETFEQALHNKSTDNFVPFEENNKSGNANEETENFVDELVEDYEKTKNPDLDEQTKDIKTHSDSD
Protein: Protein CutA (Brain acetylcholinesterase putative membrane anchor) (Q6MGD0)
Organism: Rattus norvegicus (Rat)
Function: May form part of a complex of membrane proteins attached to acetylcholinesterase (AChE).
Interaction partners:
Sequence:
MNWGGALGVLLGGGATLLLSFLCMPALLPVASRLLLLPRALLSMASGSPPSQPSPASGSGYVPGSVSAAFVTCPNEKVAKEIARAVVEKRLAACVNLIPQITSIYEWKGKIEEDSEVLMMIKTQSSLVPALTEFVRSVHPYEVAEVIALPVEQGNPPYLHWVHQVTESVSGSGKALP
Protein: Bridging integrator 3 (Q9JI08)
Organism: Mus musculus (Mouse)
Function: Involved in cytokinesis and septation where it has a role in the localization of F-actin.
Subcellular location: Cytoplasm, cytoskeleton {ECO:0000250}.
Interaction partners:
- Myc box-dependent-interacting protein 1
- Dynamin-binding protein
Sequence:
MSWIPFKIGQPKKQIVSKTVERDFEREYGKLQQLEEQTKRLQKDMKKSTDADLAMSKSAVKISQDLLSNPLCEQDQDFLHMVTALDTAMKRMDAFNQEKVNQIQKTVIEPLKKFSSIFPSLNMAVKRREQALQDYGRLQAKVEKYEEKEKTGPVLAKLHQAREELRPVREDFEAKNKQLLDEMPRFYGSRLDYFQPSFESLIRAQVIYYSEMHKIFGDLTQQLDQPGHSDEQRERENETKLSELRALSIVADD
Protein: Proline-rich protein 20C (P86479)
Organism: Homo sapiens (Human)
Interaction partners:
Sequence:
MEEPRPSKRLRSMAPNQASGGPPPEPGCCVADPEGSVEADGPAQPAQPAKPIAYVKPFRRQPPARPESPPPAERGRRRGGSRRPGRGRGRRAGPRGDAGQRQGAEGLMAPDVHIQLDHHGEPGHQGEPEITETAAFSLSETGPPPGTVQEGPGPDVAQPELGFQEPPAAPGPQAVDWQPVLTLYPCIGFRALGDSAVLQVIQTPQGTYVQGVPVFLTDIAY
Protein: Putative large ribosomal subunit protein eL32' (60S ribosomal protein L32') (P17932)
Organism: Mus musculus (Mouse)
Interaction partners:
Sequence:
MAALRPLVKPKIVKKRTKKFIRHQSDRYVKIKWNWRKPRGIDNRVRRRFKGQILMPNIGYRSNKKTKHTLSSGFRKFLVHNIKEPEVLLMCNKSYRAEIAHNVSSKNRKAIVERAAQLAIRVTNPNTRLHSEENE
Protein: Unconventional myosin-Vc (Q9NQX4)
Organism: Homo sapiens (Human)
Function: May be involved in transferrin trafficking. Likely to power actin-based membrane trafficking in many physiologically crucial tissues.
Interaction partners:
- Ras-related protein Rab-8A
- Actin, cytoplasmic 2
- Actin, cytoplasmic 1
- Ras-related protein Rab-11A
- Tropomyosin alpha-3 chain
Sequence:
MAVAELYTQYNRVWIPDPEEVWKSAEIAKDYRVGDKVLRLLLEDGTELDYSVNPESLPPLRNPDILVGENDLTALSYLHEPAVLHNLRIRFAESKLIYTYSGIILVAMNPYKQLPIYGDAIIHAYSGQNMGDMDPHIFAVAEEAYKQMARNNRNQSIIVSGESGAGKTVSARYAMRYFATVSKSGSNAHVEDKVLASNPITEAVGNAKTTRNDNSSRFGKYTEISFDEQNQIIGANMSTYLLEKSRVVFQSENERNYHIFYQLCASAQQSEFKHLKLGSAEEFNYTRMGGNTVIEGVNDRAEMVETQKTFTLLGFKEDFQMDVFKILAAILHLGNVQITAVGNERSSVSEDDSHLKVFCELLGLESGRVAQWLCNRKIVTSSETVVKPMTRPQAVNARDALAKKIYAHLFDFIVERINQALQFSGKQHTFIGVLDIYGFETFDVNSFEQFCINYANEKLQQQFNMHVFKLEQEEYMKEDIPWTLIDFYDNQPVIDLIEAKMGILELLDEECLLPHGTDENWLQKLYNNFVNRNPLFEKPRMSNTSFVIQHFADKVEYKCEGFLEKNRDTVYDMLVEILRASKFHLCANFFQENPTPPSPFGSMITVKSAKQVIKPNSKHFRTTVGSKFRSSLYLLMETLNATTPHYVRCIKPNDEKLPFEFDSKRIVQQLRACGVLETIRISAQSYPSRWTYIEFYSRYGILMTKQELSFSDKKEVCKVVLHRLIQDSNQYQFGKTKIFFRAGQVAYLEKLRLDKLRQSCVMVQKHMRGWLQRKKFLRERRAALIIQQYFRGQQTVRKAITAVALKEAWAAIIIQKHCRGYLVRSLYQLIRMATITMQAYSRGFLARRRYRKMLEEHKAVILQKYARAWLARRRFQSIRRFVLNIQLTYRVQRLQKKLEDQNKENHGLVEKLTSLAALRAGDVEKIQKLEAELEKAATHRRNYEEKGKRYRDAVEEKLAKLQKHNSELETQKEQIQLKLQEKTEELKEKMDNLTKQLFDDVQKEERQRMLLEKSFELKTQDYEKQIQSLKEEIKALKDEKMQLQHLVEGEHVTSDGLKAEVARLSKQVKTISEFEKEIELLQAQKIDVEKHVQSQKREMREKMSEITKQLLESYDIEDVRSRLSVEDLEHLNEDGELWFAYEGLKKATRVLESHFQSQKDCYEKEIEALNFKVVHLSQEINHLQKLFREENDINESIRHEVTRLTSENMMIPDFKQQISELEKQKQDLEIRLNEQAEKMKGKLEELSNQLHRSQEEEGTQRKALEAQNEIHTKEKEKLIDKIQEMQEASDHLKKQFETESEVKCNFRQEASRLTLENRDLEEELDMKDRVIKKLQDQVKTLSKTIGKANDVHSSSGPKEYLGMLQYKREDEAKLIQNLILDLKPRGVVVNMIPGLPAHILFMCVRYADSLNDANMLKSLMNSTINGIKQVVKEHLEDFEMLSFWLSNTCHFLNCLKQYSGEEEFMKHNSPQQNKNCLNNFDLSEYRQILSDVAIRIYHQFIIIMEKNIQPIIVPGMLEYESLQGISGLKPTGFRKRSSSIDDTDGYTMTSVLQQLSYFYTTMCQNGLDPELVRQAVKQLFFLIGAVTLNSLFLRKDMCSCRKGMQIRCNISYLEEWLKDKNLQNSLAKETLEPLSQAAWLLQVKKTTDSDAKEIYERCTSLSAVQIIKILNSYTPIDDFEKRVTPSFVRKVQALLNSREDSSQLMLDTKYLFQVTFPFTPSPHALEMIQIPSSFKLGFLNRL
Protein: Probable lysine-specific demethylase 4B (EC 1.14.11.66) (Probable JmjC domain-containing histone demethylation protein 3B) (Probable [histone H3]-trimethyl-L-lysine(9) demethylase 4B) (Q9V6L0)
Organism: Drosophila melanogaster (Fruit fly)
Function: Probable histone demethylase that specifically demethylates 'Lys-9' and 'Lys-36' residues of histone H3, thereby playing a central role in histone code. Demethylation of Lys residue generates formaldehyde and succinate (By similarity).
Subcellular location: Nucleus {ECO:0000255|PROSITE-ProRule:PRU00537}.
Interaction partners:
- JmjC domain-containing histone demethylation protein 1
- Lysine-specific demethylase 3
- 2-oxoglutarate and iron-dependent oxygenase JMJD4 homolog
Sequence:
MKMSEVPRIKVFRPTWEEFKDFPKYVAYMESQGAHKAGLAKVVPPPEWVPRRSGYADLDALNVTIPAPICQVVTGKQGYYQQINIQKKPLTVKQFSELASTERYATPKHFDFEDLERKYWKNITYVAPIYGADVSGSITDTDQDSWNINRLGTILDYVNKDYNIQIDGVNTAYLYFGMWKTTFAWHTEDMDLYSINYLHFGAPKTWYVVPPECGRKLEKVANQYFPASYKNCNAYLRHKMTLISPQILKQHDVPVSKITQEAGEIMITFPFGYHAGFNHGFNCAESTNFAMERWIEYGKRAVQCTCSNDMVKISMDTFVKRFQSDRYDLWMEGRDVGRHPEDPPNAVLSAAPLPPHLDVLLCDKKMKKQCNPTKAKSFKERNPDLDLDEIQQNPNVPDDVKAMLKESVLTLDTGDLATDEADFPNEDAMSLQSPANLKTKQELLEYIDDGTEDDDEEEDFKRRKQKRRYDADYDDDWLASKRKTNSRNNRGRSPRTKDDRSISPASSTSSTSRGARRGKASGTPRKTPARRKKDSITTSPAVSSAATAVKTPTSAVVAGTTSIATTTTPPADGGGGESSSLGSHCTTASP
Protein: Nucleoside diphosphate kinase (EC 2.7.4.6) (Q381H3)
Organism: Trypanosoma brucei brucei (strain 927/4 GUTat10.1)
Interaction partners:
- CTP synthase
- Ribonucleoside-diphosphate reductase
- Guanylate kinase, putative
- Guanylate kinase, putative
- 40S ribosomal protein S13, putative
- dTMP kinase
- dTMP kinase
- Pyruvate kinase
- Nucleoside diphosphate kinase, putative
- 40S ribosomal protein S23, putative
Sequence:
MPSERTFIAVKPDGVQRNLVGEIIKRFENKGYKLVGLKLLQPTEEQAKQHYIDLASKPFYSGLVSYFSSGPIVGMVWEGLGVVKGGRVLLGATNPADSLPGTIRGDFAVDVGRNVCHGSDSVESAKREIAFWFKAEELVSWTSHSVKQIYERA
Protein: Serum amyloid A protein (Q642J9)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Interaction partners:
Sequence:
MKLLLAVLVMFMVVEAQAQWYRFPGEAAGGAKDMWRAYQHMKEANWKNSDKYFHARGNYEAAQRGPGGYWAAKVISDGREALQGLIRRGNSDAAADQEANLWGRNGGDPNKYRPKGLPIKY
Protein: Cyclin-T1.1 (P34425)
Organism: Caenorhabditis elegans
Function: Regulatory subunit of the cyclin-dependent kinase pair (CDK9/cyclin T) complex, also called positive transcription elongation factor B (P-TEFb), which is proposed to facilitate the transition from abortive to production elongation by phosphorylating the CTD (carboxy-terminal domain) of the large subunit of RNA polymerase II (RNAP II).
Interaction partners:
- Probable cyclin-dependent kinase 9
- Cyclin-dependent kinase 12
- Transcription elongation factor SPT5
- Cyclin-H
- Transcription elongation factor SPT4
- Cyclin-dependent kinase 7
- OCEL domain-containing protein
- Cyclin-C
- Cell division cycle protein 73
- Cyclin-like domain-containing protein
Sequence:
MSVSSRGAASPAHRTAPTKWLFTKEEMKKTASIQEGMSREEELASRQMAAAFIQEMIDGLNNVKDPKMKIGHTGLCVAHTHMHRFYYLHSFKKYDYRDVGAACVFLAGKSQECPRKLSHVISVWRERKDRKQLTTETARNEAAQIIVLLESMILQTIAFDLNVHLPHIYVLDIMKKVDKKEHYRPLTSCAYYFATDVIAVTDWSLRYSAASMSIVIIHLMAAYANVRIERLFADFINEDSPWYAKFDETMTNEKLREMEVDFLVTYRNSCQFHHASKFNFREHRPMLENPDVRKLDRTRDARSHSPMVHHVPDSTVNVRPRAYVPRDELTVERLNKERGVEEERRKRERDRMAGKLDSSTSSEKRARIDPLANNFVSSSSSSNGKLAPPPIPPQLNFPPPPIVSSGYNHKNQINRKNHENNHTNSSVSPAFVPSARTFDVAPMLTPPTAPKLQSADNSDMDLEDGELE
Protein: Root meristem growth factor-like protein (F4J5G8)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Interaction partners:
Sequence:
MMRFTIIVIAFLLIIQSLEEEHILVYAHEGGEAGHKSLDYQGDQDSSTLHPKELFDAPRKVRFGRTTRAEKEQVTAMNNDSWSFKISGASKHLIVERKLGFHKRREHKQTNILADHDTTKNTFCKKMMIIVNDLTSLPTLEPSTSTNDMEKLARLLRDDYPIYSKPRRKPPVNNRAPDKF
Protein: Myocardin related transcription factor A (A0A8I5Y2C3)
Organism: Rattus norvegicus (Rat)
Subcellular location: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
Interaction partners:
Sequence:
VDFSSVVCLPPSVIAVNGLDGGGAGENDEEPVLLSLSAAPSPQSEAVANELQELSLQPELTLGLHPGRNPNLPPLSERKNVLQLKLQQRRTREELVSQGIMPPLKSPAAFHEQRRSLERARTEDYLKRKIRSRPERSELVRMHILEETSAEPSLQAKQLKLKRARLADDLNEKIAQRPGPMELVEKNILPVESSLKEALIVGQVNYPKVADSSSFDEDSSDALSPEQPASHESQGSVPSPLESRASDLLPSATSISPTQQSQPKSASEKSQRSKKAKELKPKVKKLKYHQYIPPDQKQDKGAPAMDSSYAKILQQQQLFLQLQILNQQQQQQQQQHYNYQAILPAPPKPSGETPGSSAPTPSRSLSTSSSSSSGTPGPGGLARQNSTALAGKPGALPANLDDMKVAELKQELKLRSLPVSGTKTELIERLRAYQDQVSPAPGAPKAPATTSVLSKAGEVVVAFPAALLSTGSALVTAGLAPAEMVVATVTSNGMVKFGSTGSTPPVSPTPSERSLLSTGDENSTPGDAFGEMVTSPLTQLTLQASPLQIVKEEGARAASCCLSPGARAELEGLDKDQMLQEKDKQIEELTRMLQQKQQLVELLRLQLEQQKRAQQPAPASSPVKRESSFSSCQLSCQPQGAARAFGPGLVVPTTNHGDAQAPAPESPPVVVKQEAGPPEPDLAPASQLLLGSQGTSFLKKVSPPTLVTDSTGTHLILTVTNKSADGPGLPTGSPQQPLSQPGSPAPGPPAQMDLEHPPQPSFATPTSLLKKEPPGYEETVTQQPKQQENGSSSQHMDDLFDILIQSGEISADFKEPPSLPGKEKSPPAEAYGPPLTPQPSPLSELPQAAPPPGSPTLPGRLEDFLESSTGLPLLTSGHEGPEPLSLIDDLHSQMLSSSAILDHPPSPMDTSELHFAPEPSSGMGLDLAVGHLDSMDWLELSSGGPVLSLAPLSTTAPSLFSMDFLDGHDLQLHWDSCL
Protein: Rhomboid-like protease 4 (EC 3.4.21.105) (Q695T8)
Organism: Toxoplasma gondii
Function: Putative serine protease involved in intramembrane proteolysis and the subsequent release of polypeptides from their membrane anchors.
Subcellular location: Membrane {ECO:0000269|PubMed:15753289}; Multi-pass membrane protein {ECO:0000269|PubMed:15753289}. Note=Uniformly distributed at the surface of intracellular and extracellular tachyzoites.
Interaction partners:
Sequence:
MVWTSAVVMASPHGSASRAGSNRRTDGLSVNLGQDNTLKHDTPTETAPSASPPRVAPAPIPPKGGPAATPGKDGALDNRGSHDSVPPVAVAIPGREEVNATASQKSVVAGANSQPTPGTQSSKAPASDVDGSSKHGSPEHPDAGSPEVNAEGVPVEEALQAIGDDDPLIHNLPDGVVGRRAPANPFNSSMYAKLRGKKKKHRPKVRDPKLNNNPLRGRLVVCISTTALLCWIYMWELIYNFTSFNGRCVSPVMYPDYKLQEAKQRQPYVIRYGYGGCEYNLGSLAYPRASFGTSAGDKGWPVDLVPNGSAGSAATSWDSPNARVLRHLGGLETNYIREYSETFRLFTSMYMHGGWLHILINLSCQIQILWIIEPDWGFLRTTLLFFLGGISGNLLSAVADPCSITVGSSGSMYALLGALIPYCVEYWKSIPRPGCILVFMIVVIIGILTGMAGFTDNYAHMGGALGGILWGFASITTVSACDKCTLGERMAMTPPFSWCVPKATQQKLLERAKARKAEAIRRRKLQAIQKKKAGGARGKAMYAVKMRLQEEGRPPCKMSFREWVIRGLCAAALFAYWLILFLYLLDPSLYKSYSPPGQLKFSGWLYCKCGTIVYQAPQTYGNLGRFWCFGSEKDAQYYLEP
Protein: Stac-like, isoform H (A0A0B4KG20)
Organism: Drosophila melanogaster (Fruit fly)
Subcellular location: Cell membrane, sarcolemma {ECO:0000256|ARBA:ARBA00004278}; Peripheral membrane protein {ECO:0000256|ARBA:ARBA00004278}; Cytoplasmic side {ECO:0000256|ARBA:ARBA00004278}. Cytoplasm {ECO:0000256|ARBA:ARBA00004496}.
Interaction partners:
Sequence:
MGISAHAAPASFWNHPRRIRRTPTSDRDGVDQCRPWICRRKDRRPAHPAANRPPESRVCGPSSTFRWDDWAAPAPRTRERATDCARMCMCTSRIPYSVARICARTTSMHSSRPASRSSSFIRRPLTRRQRMAVGGVTRRLWRTMRVYTIHQGRGVRRARAAQAVAAYLRDRRARIGKGWPAQGHGVRISATEQWADKPVVRRPGDPTRRVAAGAVPVLAERLPKVTGSSVKSSSGRRSRRRRIFGWRGPRGGSLSPQGGSMASYNGVLKDYSHSSLNEAFKSQNNVNFKLIKTVSDFSETLSRLYEEHATALQVAVSNYRKKNAELRKERPACHLAIFQAWETFLQEVETDSQACNDVASVLSRQVSRPMLDKSFHRKVQSRKIFTHRESFETIIAKTEEKLSKCRVDYKQCHLAHRQNPSQHSLTEYIDAHNAYVQQLHATNGMLEAYHTDTLPQQMQELEEIHNDLVAIVSDSLMQGAEVIAGKANDQAKRYNSLSNQCAAVSPQQDLVNFVRLLAQPSQAQKIPRRLFASPQAEVGEEAGDHNEMTPCLRNELVFDRHSTLSQRSALESLKREAIELELQIRQLQDSIEALNRTQTRGIEGQLYNKVNELQEDLSMKKFDLRAKQIHLAAIRAQKDLFVSKVEPTSPRNERKFSAATAPSMKTKWLKAFKSLKPAGSGSAQQADSQPPRQNQMYHAVSTVLTLRRNGASSTASEPLRPNLDGSHHLQEYTYKKITACDVCSQILRGHTRQGLRCRICKLNAHGDCAPNLPRCQPKQKLLRRQKSTSELENRVDIEEETGADKSVQAKQMDGSVAGGSALPVPVLSERELGRAPPPDIPIVSVSELALQEQQQQQQQQQQQHQQQQRSLASVAQAAAVRAGRGVRPPPVAMPILGVQLQQQELQQQRGGLPVPSQDISSSSAPHSPRRQKLNLRMKSLSLDSPESSELHGQFRRRTQLPGTGASTSAGSGYYHGGSGGHLEHSTPPSNNSRLHSPSSPSHPGRKLLYATRGMRGGSVDLPDEMEKSQSSASTSPCLSPKTHRLLPTNLYVIIYNFKARHADELDLKAGYKVTVIDNSDPDWWKGKVLGRVGYFPSKYCVRLNANEKPLQVTHNLQVSDSERGENLTLLRDQIVIQTGDEVNGMVMIRAAEHGQGYCPIKYLQEV
Protein: Zinc finger protein 706 (Q9D115)
Organism: Mus musculus (Mouse)
Function: Transcription repressor involved in the exit of embryonic stem cells (ESCs) from self-renewal. Acts by repressing expression of KLF4.
Subcellular location: Cytoplasm {ECO:0000269|PubMed:24412312}. Nucleus {ECO:0000269|PubMed:24412312}.
Interaction partners:
Sequence:
MARGQQKIQSQQKNAKKQAGQKKKQGHDQKAAAKAALIYTCTVCRTQMPDPKTFKQHFESKHPKTPLPPELADVQA
Protein: Transcription termination factor MTERF2, chloroplastic (Mitochondrial transcription termination factor 2) (Protein EMBRYO DEFECTIVE 2219) (F4IHL3)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Transcription termination factor involved in processing of plastid transcripts (By similarity). Essential for embryogenesis.
Subcellular location: Plastid, chloroplast {ECO:0000269|PubMed:21464319}.
Interaction partners:
- rRNA processing protein-like protein
- Transcription termination factor MTEF18, mitochondrial
- Mitochondrial transcription termination factor family protein
- Transcription termination factor MTERF15, mitochondrial
- Pentatricopeptide repeat-containing protein At2g15820, chloroplastic
- Derlin-2.1
Sequence:
MLLHCNVSYYTSTFSFISSSLRRQDNADDSQDTVIRRRHNARSISLYIRHNRDLKLNKNPNESQETFVPPPPPPRRDLDGENRSKLLELSLVTRRTPQFPGSIYAQSASDADIASSLPSLRNFLGSDGDDDGESEREMIVKALEIRRKVTKEIIKESLVRKGRFGITYATNVTDRLGDFVDHVMIQAAALKRLPEFSESRFNLRARTVIEDSNFVPLVRWLKHHELSYNRIAKIICMSKGNLDSIRIMIEWLKSIHVKGEFIAVAFLRSGDNILQRNREELNEIVEYLESNGVRRDWMGYVVGRCPELLSFSMEEVKSRVDFFLKMGMNQNDFGTMVYDYPKIIGFFSFQVMEKKINYLKEFGLSTEEVGRLLAYKPHLMGCSIEERWKPLVKYFYYLGIPKEGMKRILVVKPILYCIDLEKTIAPKVRFLQEMGIPNEAIGNMLVKFPSLLTNSLYKKIRPVVIFLLTRAGVTQKDIGKVIAMDPALLGCSIGTKLEPNMRYYISLGIRFYQLGEMIADFPMLLRYNVDNLRPKYRYLRRTMIRPLQDLIEFPRFFSYSLERRIIPRHTIMVENRVNFKLRYMLACTDEEFERRVRDKVERRERFEAGLDSEDSQPSDENISDQEIAFSDEAEEEEDLTE