wanglab/gogpt-training-data huggingface dataset:
Protein: Neuromedin-U receptor 2 (NMU-R2) (G-protein coupled receptor FM-4) (G-protein coupled receptor TGR-1) (Q9GZQ4)
Organism: Homo sapiens (Human)
Function: Receptor for the neuromedin-U and neuromedin-S neuropeptides.
Subcellular location: Cell membrane; Multi-pass membrane protein.
Interaction partners:
- Neuromedin-S
- Neuromedin-U
- Guanine nucleotide-binding protein G
- Neuromedin-U receptor 1
- Guanine nucleotide-binding protein G
- Pro-opiomelanocortin
- Neuropeptide S
- Neurotensin/neuromedin N
Sequence:
MSGMEKLQNASWIYQQKLEDPFQKHLNSTEEYLAFLCGPRRSHFFLPVSVVYVPIFVVGVIGNVLVCLVILQHQAMKTPTNYYLFSLAVSDLLVLLLGMPLEVYEMWRNYPFLFGPVGCYFKTALFETVCFASILSITTVSVERYVAILHPFRAKLQSTRRRALRILGIVWGFSVLFSLPNTSIHGIKFHYFPNGSLVPGSATCTVIKPMWIYNFIIQVTSFLFYLLPMTVISVLYYLMALRLKKDKSLEADEGNANIQRPCRKSVNKMLFVLVLVFAICWAPFHIDRLFFSFVEEWSESLAAVFNLVHVVSGVFFYLSSAVNPIIYNLLSRRFQAAFQNVISSFHKQWHSQHDPQLPPAQRNIFLTECHFVELTEDIGPQFPCQSSMHNSHLPAALSSEQMSRTNYQSFHFNKT
Protein: BIP2 protein (Q9U1I0)
Organism: Drosophila melanogaster (Fruit fly)
Subcellular location: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
Interaction partners:
Sequence:
MMADRYASDLALVVVAQITQTIGYSCTLSAPLELLQDILQKFVQEFARDMHRHMEHANRIEPNLKDARLSIKNLSINVQELLDYIGNVAPVGFIRDVPQFPIGKSVNMNFLKPGSAETLTRPVYIFEYLPPMQDPELREIPADVQKEFSEKQEFCSKAEYSSTNAADKLGAKHIDSISPNTVINFRSNAFELDVGSSVREMSSVVMTTGGFISPAIEGKLPEDIIPDIVEKFLGLDAPFSPTIIVNSLQKSPQLALSDRDKTVNPRKIIPSETKIFKQNAALLTSGHSESSIIYASNNHTMLTVTTPKKNRKQKHDLICEPGQSELLTNPFEKAQEKSQRKALKMYKQTSKNQRDSSINQIQNMKKLKKKFNRGSFDPNKKHLEKIFKKQSKLKQNDLQLDIDEKHFLQNSQTTSGLAIKANSNENALQADIPSQPPTVTSQIENNFRNSIYPVQPSVIQQTQVLLAEKKSGSEPERSKLDIFKKISKPRTPRPDIGATLVPPGTGVSVFGSTMTPSALISLPSGTTITPTPSLGLNSENKNVPSMKINPCNIFDGTIPLTKAGVEMSIIDSPKPKKRGRKPGGKNLIKQTNVISQPLINKVERKKSSQAITLPLSSSPMIITQSSLNVSPPTEPLNLCNTEQPSNNFLSNLYAKEKKDRKKYKSLPENVMQLDKSCSPEKASTLHNSIRPTKQNNDVQCSDKFVTISNALSNASIYPGIQTGMVPLLPLLQFPPRPGLIPTGPGLFPAVTGLVGFGNHGNRIPISPFIDYPGPEESVADTVRCPPIKDSPVTDSDQFLSRSSTQTDLQMDRNYCNVAPLVPDSMKFAECKSVSCASTILENPSAQATSKINTKPLLEASGNPDDPIEVSDDSDESMHNRQMVQRKTPISSPTYVKTSFAELNPSSFTSAASNGEEKSKMDLRNIVSLSSNEPLKKFKKLVKQSFPDVKSVPHTPASHSSFPQFNLPNFMGGDKFSLAGGADLIPLSRVSDSEYSSKIVPFSSLGGTIPNQIKISEEHNIFSTFSNYEDITITPTGLTSLEPKMRKHHKKLKKVKEGKNKKKKEKKDKSKKADQIGLPSFKSDRKIKANDKRQKKEKKKDKDKQILVHIPDDTEEFDKVPLANNDEPVLKSSSMTINPSLGAATSGISPNQIPKLTLKLSGKSTLFSSSEKEMTDAGKLKQTTILSSENKKRERDNSPELARFSPLVTGPPKNKQSETLHLGNSSTAVLPVPSPVAVRAVQLPVSQTSSNSAGWLSNPNNSNTASSTLSASSVLLPQQLMLAPHTIMNNFVPAMCNSTGTVSKSGLCSSPPNTSEENANAMQIAESSRPSSYVDAEGNRIWICPACGKVDEGSAMIGCDGCDAWYHWICVGITFAPKDNDDWFCRVCVTKKRIHGSEKKKRRNKKK
Protein: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 (EC 3.6.4.-) (HepA-related protein) (hHARP) (Sucrose nonfermenting protein 2-like 1) (Q9NZC9)
Organism: Homo sapiens (Human)
Function: ATP-dependent annealing helicase that binds selectively to fork DNA relative to ssDNA or dsDNA and catalyzes the rewinding of the stably unwound DNA. Rewinds single-stranded DNA bubbles that are stably bound by replication protein A (RPA). Acts throughout the genome to reanneal stably unwound DNA, performing the opposite reaction of many enzymes, such as helicases and polymerases, that unwind DNA. May play an important role in DNA damage response by acting at stalled replication forks.
Subcellular location: Nucleus {ECO:0000269|PubMed:19793862, ECO:0000269|PubMed:19793863}. Note=Recruited to damaged DNA regions.
Interaction partners:
- Replication protein A 32 kDa subunit
- DNA-directed primase/polymerase protein
- Replication protein A 14 kDa subunit
- Replication protein A 70 kDa DNA-binding subunit
- CST complex subunit STN1
- Bifunctional 3'-5' exonuclease/ATP-dependent helicase WRN
- DNA repair protein RAD51 homolog 1
- Structure-specific endonuclease subunit MUS81
- Fanconi anemia group M protein
- RPA-related protein RADX
Sequence:
MSLPLTEEQRKKIEENRQKALARRAEKLLAEQHQRTSSGTSIAGNPFQAKQGPSQNFPRESCKPVSHGVIFKQQNLSSSSNADQRPHDSHSFQAKGIWKKPEEMPTACPGHSPRSQMALTGISPPLAQSPPEVPKQQLLSYELGQGHAQASPEIRFTPFANPTHKPLAKPKSSQETPAHSSGQPPRDAKLEAKTAKASPSGQNISYIHSSSESVTPRTEGRLQQKSGSSVQKGVNSQKGKCVRNGDRFQVLIGYNAELIAVFKTLPSKNYDPDTKTWNFSMNDYSALMKAAQSLPTVNLQPLEWAYGSSESPSTSSEGQAGLPSAPSLSFVKGRCMLISRAYFEADISYSQDLIALFKQMDSRRYDVKTRKWSFLLEEHSKLIAKVRCLPQVQLDPLPTTLTLAFASQLKKTSLSLTPDVPEADLSEVDPKLVSNLMPFQRAGVNFAIAKGGRLLLADDMGLGKTIQAICIAAFYRKEWPLLVVVPSSVRFTWEQAFLRWLPSLSPDCINVVVTGKDRLTAGLINIVSFDLLSKLEKQLKTPFKVVIIDESHFLKNSRTARCRAAMPVLKVAKRVILLSGTPAMSRPAELYTQIIAVKPTFFPQFHAFGLRYCDAKRMPWGWDYSGSSNLGELKLLLEEAVMLRRLKSDVLSQLPAKQRKIVVIAPGRINARTRAALDAAAKEMTTKDKTKQQQKDALILFFNRTAEAKIPSVIEYILDLLESGREKFLVFAHHKVVLDAITQELERKHVQHIRIDGSTSSAEREDLCQQFQLSERHAVAVLSITAANMGLTFSSADLVVFAELFWNPGVLIQAEDRVHRIGQTSSVGIHYLVAKGTADDYLWPLIQEKIKVLAEAGLSETNFSEMTESTDYLYKDPKQQKIYDLFQKSFEKEGSDMELLEAAESFDPGSASGTSGSSSQNMGDTLDESSLTASPQKKRRFEFFDNWDSFTSPL
Protein: V-type proton ATPase subunit D (V-ATPase subunit D) (Vacuolar proton pump subunit D) (P32610)
Organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Function: Subunit of the V1 complex of vacuolar(H+)-ATPase (V-ATPase), a multisubunit enzyme composed of a peripheral complex (V1) that hydrolyzes ATP and a membrane integral complex (V0) that translocates protons. V-ATPase is responsible for acidifying and maintaining the pH of intracellular compartments.
Subcellular location: Vacuole membrane {ECO:0000269|PubMed:7797485}; Peripheral membrane protein {ECO:0000305}; Cytoplasmic side {ECO:0000305}.
Interaction partners:
- V-type proton ATPase subunit a, vacuolar isoform
- V-type proton ATPase subunit c
- V-type proton ATPase subunit a, Golgi isoform
- V-type proton ATPase subunit E
- V-type proton ATPase subunit G
- V-type proton ATPase subunit c'
- V-type proton ATPase subunit F
- V-type proton ATPase subunit C
- V-type proton ATPase catalytic subunit A
- V-type proton ATPase subunit d
Sequence:
MSGNREQVFPTRMTLGLMKTKLKGANQGYSLLKRKSEALTKRFRDITKRIDDAKQKMGRVMQTAAFSLAEVSYATGENIGYQVQESVSTARFKVRARQENVSGVYLSQFESYIDPEINDFRLTGLGRGGQQVQRAKEIYSRAVETLVELASLQTAFIILDEVIKVTNRRVNAIEHVIIPRTENTIAYINSELDELDREEFYRLKKVQEKKQNETAKLDAEMKLKRDRAEQDASEVAADEEPQGETLVADQEDDVIF
Protein: Consortin (Q6PJW8)
Organism: Homo sapiens (Human)
Function: Required for targeting of connexins to the plasma membrane.
Subcellular location: Cell membrane {ECO:0000269|PubMed:19864490}; Single-pass membrane protein {ECO:0000269|PubMed:19864490}. Golgi apparatus, trans-Golgi network membrane {ECO:0000269|PubMed:19864490}; Single-pass membrane protein {ECO:0000269|PubMed:19864490}. Cytoplasmic vesicle, secretory vesicle {ECO:0000269|PubMed:19864490}. Note=Located predominantly in the trans-Golgi network. Probably trafficks between the trans-Golgi network and the cell membrane via the secretory pathway.
Interaction partners:
- V-type proton ATPase subunit F
- V-type proton ATPase catalytic subunit A
- V-type proton ATPase subunit B, brain isoform
- V-type proton ATPase subunit B, kidney isoform
- V-type proton ATPase subunit E 1
- V-type proton ATPase subunit E 2
- Lens fiber membrane intrinsic protein
- V-type proton ATPase subunit d 1
- V-type proton ATPase subunit d 2
- V-type proton ATPase 16 kDa proteolipid subunit c
Sequence:
MDDSDTPTYYLQIEPQDGCHPGDSVERSVTCLPSASDENENQLDGDGHEHLTSSDSAMGKPQVSEQDSLNNNESCTLSCEVAAGENLQNTLCEASRDEQAFLGKDKKIPGKRSPRSKKGTAKKIPPGLFSGDIAPLMQEKVLSAVTYAVDDEEAAEVNANEQPEAPKLVLQSLFSLIRGEVEQLDSRALPLCLHQIAESYFQEEDYEKAMKFIQLERLYHEQLLANLSAIQEQWETKWKTVQPHTVTALRNSEKGFNGEDFERLTKICATHQDPLLSKHKIAAVEKSQERKCSTQLLVSEDPKEGGATTKESESKTCLGTESSKESQHTVEPLGSSPCCHQMDVQTDSPSLSVTAGKDHMEELLCSAEATLALHTQSSETAGSPSGPDSSEDACEDDSRLQLAQTEACQDVARIEGIAEDPKVFLSSKSKTEPLISPGCDRIPPALISEGKYSQAQRKELRLPLRDASEALPTDQLENNELNELQQPDLTDSDGKSPQAQADSDGSENVLCGNNQISDLGILLPEVCMAPEEKGDKDDQLNKETEDYLNSLLEGCLKDTEDSLSYEDNQDDDSDLLQDLSPEEASYSLQENLPSDESCLSLDDLAKRIEIAEVVPTEGLVSILKKRNDTVGDHPAQMQHKPSKRRVRFQEIDDSLDQDEVGGGSCILLVLLCIATVFLSVGGTALYCTFGDMESPVCTDFADNMDFYYTKLLQGVAELKHWIYLS
Protein: Calsequestrin (F1NQT9)
Organism: Gallus gallus (Chicken)
Subcellular location: Sarcoplasmic reticulum lumen {ECO:0000256|ARBA:ARBA00004564}.
Interaction partners:
Sequence:
MKATCWILAGFCLLFCCKAEEGLNFPTYDGKDRVIDLNEKNYKHALKKYDMLCLLFHEPVSSDRVSQKQFQMTEMVLELAAQVLEPRSIGFGMVDSKKDAKLAKKLGLVEEGSLYVFKEERLIEFDGELATDVLVEFLLDLLEDPVEIINSKLELQAFDQIDDEIKLIGYFKGEDSEHYKAFEEAAEHFQPYVKFFATFDKGVAKKLGLKMNEVDFYEPFMDEPVHIPDKPYTEEELVEFVKEHKRATLRKLRPEDMFETWEDDMEGIHIVAFAEEDDPDGFEFLEILKQVARDNTDNPDLSIVWIDPDDFPLLITYWEKTFKIDLFRPQIGIVNVTDADSVWMEIRDDDDLPTAEELEDWIEDVLSGKINTEDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
Protein: Probable membrane bound polyketide synthase Pks6 (O86335)
Organism: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Interaction partners:
- Probable fatty acid synthase Fas
- Phenyloxazoline synthase MbtB
- Probable long-chain-fatty-acid--AMP ligase FadD30
- Malonyl CoA-acyl carrier protein transacylase
- Isonitrile lipopeptide synthase
- Peptide synthetase MbtE
- Thioesterase TesA
- Peptide synthetase MbtF
- NADH-quinone oxidoreductase subunit C
- NADH-quinone oxidoreductase subunit I
Sequence:
MTDGSVTADKLQKWFREYLSTHIECHPNEVSLDVPIRDLGLKSIDVLAIPGDLGDRFGFCIPDLAVWDNPSANDLIDSLLNQRSADSLRESHGHADRNTQGRGSINEPVAVIGVGCRFPGDIDGPERLWDFLTEKKCAITAYPDRGFTNAGTFAESGGFLKDVAGFDNRFFDIPPDEALRMDPQQRLLLEVSWEALEHAGIIPESLRLSRTGVFVGVSSTDYVRLVSASAQQKSTIWDNTGGSSSIIANRISYFLDIQGPSIVIDTACSSSLVAVHLACRSLSTWDCDIALVGGTNVLISPEPWGGFREAGILSQTGCCHAFDKSADGMVRGEGCGVIVLQRLSDARLEGRRILAILTGSAVNQDGKSNGIMAPNPSAQIGVLENACKSARVDPLEIGYVEAHGTGTSLGDRIEAHALGMVFGRKRPGSGPLMIGSIKPNIGHLEGAAGIAGLIKAVLMVERGSLLPSGGFTEPNPAIPFTELGLRVVDELQEWPVVAGRPRRAGVSSFGFGGTNAHVIVEEAGSVGADTVSGRADVGGSGGGVVAWVISGKTASALAAQAGRLGRYVRARPALDVVDVGYSLVSTRSVFDHRAVVVGQTRDELLAGLAGVVAGRPEAGVVCGVGKPAGKTAFVFAGQGSQWLGMGSELYAAYPVFAEALDAVVDELDRHLRYPLRDVIWGHDQDLLNTTEFAQPALFAVEVALYRLLMSWGVRPGLVLGHSVGELAAAHVAGALCLPDAAMLVAARGRLMQALPAGGAMFAVQAREDEVAPMLGHDVSIAAVNGPASVVISGAHDAVSAIADRLRGQGRRVHRLAVSHAFHSALMEPMIAEFTAVAAELSVGLPTIPVISNVTGQLVADDFASADYWARHIRAVVRFGDSVRSAHCAGASRFIEVGPGGGLTSLIEASLADAQIVSVPTLRKDRPEPVSVMTAAAQGFVSGMGLDWASVFSGYRPKRVELPTYAFQHQKFWLAPAPSVSDPTAAGQIGASDGGAELLASSGFAARLAGRSADEQLAAAIEVVCEHAAAVLGRDGAAGLDAGQAFADSGFNSLSAVELRNRLTAVTAVTLPATAIFDHPTPTELAQYLITQIDGHGSSAAAAANPAERIDALTDLFLQACDAGRDADGWKMVALASNTRERMSSPVRNNVSKNVALLADGISDVVVICIPTLTVLSDQREYRDIANAMTGRHSVYSLTLPGFDSSDALPQNADMIVETVSNAIIDVVGGSCRFVLSGYSSGGVLAYALCSHLSVKHQRNPLGVALIDTYLPSQIANPSMNEGFSPNDTGKGLSREVIRVARMLNRLTATRLTAAATYAAIFQAWEPGRSMAPVLNIVAKDRIATVENLREERINRWRTAAAEAAYSVAEVPGDHFGMMSTSSEAIATEIHDWISGLVRGPHR
Protein: Transcription initiation factor TFIID subunit 12 (Q5B9L1)
Organism: Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) (Aspergillus nidulans)
Subcellular location: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
Interaction partners:
- Transcription initiation factor TFIID subunit 10
- Transcription initiation factor TFIID subunit 6
- Transcription initiation factor TFIID subunit 2
- Transcription initiation factor TFIID subunit 9
- Transcription initiation factor TFIID subunit 7, putative
- Transcription initiation factor TFIID subunit 5
- Transcription factor TFIID complex 145 kDa subunit, putative
- Transcription initiation factor TFIID subunit 13
- TATA-box-binding protein
- SAGA-like transcriptional regulatory complex subunit Spt3, putative
Sequence:
MEGNQASSPQQMVPQHSNLIRTDQVQKLPHLNDQQKVQHTQLVRNFWEILNSRDAQSPEYQQAHTRLSQLSQSLMKGMRMYQQNRQLQHQQMQAASAAQGQPVQRSQSVNPQNFAQLLPQFQQKVNSLQLFLPPNISSEQAGTWLPEAKLRYGIALQKQEIGRARLSELRQQHSQRQSAGNLTQEEMQEFKNRQVQAEKLFREGSEFLAKFKEQQDLFKAQQQRAGTQHSSQQLPQQSGARPVTTAPTTSAGAPTAPSAVHPGPTPAAHTINSAVNAARNQAAQAAMSPTPQPGQASSNQGPTPAPAVAAGTPQQQPPQSQMSAQQNASGFNQVSAPDGSTPTGSTAQATNVQGPPRPLSQQAAMAQAAQNYSNNTNANNTNNTNAVQQQNMNQPSVNSHAHPQGYIQNRSTENSARNVNMVIPKNLNVPPPKPVPMAPDRPTLSSGPSHGAMGMMGQPAIQKHPGYVLEGEGQRVLSKKMLDVLVRQVTGGGEGEGLTPDAEEFMLQMADDFVDDVITAACRLAKLRHSSSLEIRDIQLVLERNYNMRISGFSTDDLRTVKKPQPTQGWTQKMSAIQAAKVTQGKAE
Protein: Olfactory receptor 9G1 (Olfactory receptor 9G5) (Olfactory receptor OR11-114) (Q8NH87)
Organism: Homo sapiens (Human)
Function: Odorant receptor.
Subcellular location: Cell membrane; Multi-pass membrane protein.
Interaction partners:
- Guanine nucleotide-binding protein G
Sequence:
MQRSNHTVTEFILLGFTTDPGMQLGLFVVFLGVYSLTVVGNSTLIVLICNDSCLHTPMYFFTGNLSFLDLWYSSVYTPKILVTCISEDKSISFAGCLCQFFFSAGLAYSECYLLAAVAYDRYVAISKPLLYAQAMSIKLCALLVAVSYCGGFINSSIITKKTFSFNFCRENIIDDFFCDLLPLVELACGEKGGYKIMMYFLLASNVICPAVLILASYLFIITSVLRISSSKGYLKAFSTCSSHLTSVTLYYGSILYIYALPRSSYSFDMDKIVSTFYTVVFPMLNLMIYSLRNKDVKEALKKLLP
Protein: Protein quick-to-court (Q9VMU5)
Organism: Drosophila melanogaster (Fruit fly)
Function: In adult males, modulates sexual behavior by playing a role in sex discrimination and maintaining normal levels of sexual activity towards both males and females.
Interaction partners:
Sequence:
MMTSLQLETSLPAVEEQVQREKDNDSAEDSHTASTTPTRIPHPAVARFRRSASLRLRGNPAELGLRAEHCPAGGGGFSSRAKLTAIPSSLETRSHPVHLRRNRSWCNLGHKTEQEPEVEASTEALCNAAQCLSLDKEALAPKVGNSSMANGKPRNLSLQLNGGSDISSSGTSSSSSNNKESSPRTTRTPRTPQTPQTPQTPASGVAASVAETPHSCIRQGNCVKANQVKLSTLHESKISPRTPPVTPDSPSTYLDDDIDSMYSFATTTSGRSTMSCEHPYVARNGTTFSGRKMKYVVHCSNYAGQVGPDYLTPTQRAQRQIRRLKELLCIARQDLEQKDTELLRLTREVVELRLFKASLSSPEERSASSDAVTVREAELKTSQDVSPIVDMVDEGNAKGSPRHLSRQQQQQANHSLQAMQMSAEMQSSYADSGHFEDLTMSSVHSKDSQTQSEACGTATPDGEADVGCGAGGDSASNLENYELQRQELISMYEHRIEELIRSQDSATSDLKRSHNDKVEALLQKLAECNTRYSDMVPDYEQAKQRIRELEKQLEDLQRKLIEHEEKQNKMYLHMYQQGQEAERISRADQALDLAQRQPESKVSINELLHQLQSTQDELENIRASECRMRECGSNHALLTAKEAISLWVLGARKTIYRRLLEAQKNRTHVDPEVTLQFLKSAIFYFLTDKENSQGHLQAIESILEFTDAEKQKISAANRTPK
Protein: Spindlin-2A (Protein DXF34) (Spindlin-like protein 2A) (SPIN-2) (SPIN-2A) (Q99865)
Organism: Homo sapiens (Human)
Function: May be involved in the regulation of cell cycle progression (By similarity). Exhibits H3K4me3-binding activity.
Subcellular location: Nucleus {ECO:0000250|UniProtKB:Q9BPZ2}.
Interaction partners:
Sequence:
MKTPNAQEAEGQQTRAAAGRATGSANMTKKKVSQKKQRGRPSSQPRRNIVGCRISHGWKEGDEPITQWKGTVLDQVPINPSLYLVKYDGIDCVYGLELHRDERVLSLKILSDRVASSHISDANLANTIIGKAVEHMFEGEHGSKDEWRGMVLAQAPIMKAWFYITYEKDPVLYMYQLLDDYKEGDLRIMPESSESPPTEREPGGVVDGLIGKHVEYTKEDGSKRIGMVIHQVETKPSVYFIKFDDDFHIYVYDLVKKS
Protein: Signal recognition particle receptor subunit beta (Q9FFK7)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Subcellular location: Endoplasmic reticulum membrane {ECO:0000256|ARBA:ARBA00004389}; Single-pass membrane protein {ECO:0000256|ARBA:ARBA00004389}.
Interaction partners:
- AT4g30600/F17I23_60
- Signal recognition particle subunit SRP68
- Signal recognition particle receptor subunit beta
- Signal recognition particle 14 kDa protein
- Signal recognition particle 9 kDa protein
- Serine/threonine-protein kinase ATR
- Signal recognition particle 19 kDa protein
- Cystatin/monellin superfamily protein
- Signal recognition particle subunit SRP72
- Signal recognition particle subunit SRP72
Sequence:
MENLEDLKILAEQWSHQGIEYLQKIPPNQLYAAIGVLLFTTILLFLSIRLVRRTKSNTVLLSGLTGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSENTKKGKIKPVHLVDVPGHSRLRPKLEEFLPQAAAIVFVVDALEFLPNCRAASEYLYEILTNANVVKKKIPVLLCCNKTDKLTAHTKEFIRKQMEKEIEKLRASRSAVSTADIANDFTIGIEGEVFSFTHCSNKVTVAEASGLTGETIQIEDFIREYIKP
Protein: Helix-loop-helix DNA-binding domain containing protein, expressed (Os03g0811400 protein) (Q7XZF8)
Organism: Oryza sativa subsp. japonica (Rice)
Interaction partners:
- Transcription factor RF2a
- Os03g0829900 protein
- Os06g0520733 protein
- Os02g0286933 protein
- Os02g0579800 protein
- Expressed protein
- Os10g0560200 protein.
- Os02g0763000 protein.
- Os06g0266266 protein
- Os03g0830500 protein
Sequence:
MFPVEVAAAAAAAGRMQGEAVVPMMLPPFFMDSGIWPAAAGVVDVAASAEEEAAAAAAAAQDRALAASRNHREAEKRRRERIKSHLDRLRAVLACDPKIDKASLLAKAVERVRDLKQRMAGIGEAAPAHLFPTEHDEIVVLASGGGGVGGAGGAAAVFEASVCCDDRCDLLPELIETLRALRLRTLRAEMATLGGRVRNVLVLARDAGGAGEGGDGDDDRAGYSAVSNDGGDFLKEALRALVERPGAAAGDRPKRRRVVSDMNMQAAA
Protein: AT4g38690/F20M13_250 (PLC-like phosphodiesterases superfamily protein) (Q9SZP6)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Interaction partners:
- Peptidyl-prolyl cis-trans isomerase CYP21-1
- Probable magnesium transporter NIPA6
- Dirigent protein 15
- Protein MANNAN SYNTHESIS-RELATED 1
- PEARLI 4 protein family protein)
- Protein MANNAN SYNTHESIS-RELATED 2
- Probable magnesium transporter NIPA7
- Peptidyl-prolyl cis-trans isomerase CYP18-3
- Dirigent protein 4
- At2g21200
Sequence:
MGSHLSKQLERRKAISTEKKALTDLEKSCGCEFPGCDYMPSDRKNWMAGVGPEKLHINKIVWPGTHDSATNKIGIRFVSRPFAKCQSLSIYNQLVAGTRVLDIRVQEDRRVCHGILKTYSVDVVLADLKRFLSETESEIVILEIRTEFGHEDPPEFDKYLVEQLGEHLIHQDDHVFSKTVAELLPKRVICVWKPRKSPQPKHGDPLWSAGYLKDNWIDTDLPSTKFESNIKHLSQQQPATSRKFFYRVENTVTPQPDNPIMCVKPVTKRIHCYAKVFIIECVKRGCADKLQIFSTDFIDNEFVDACVGLTFARAEGKA
Protein: GINS subunit domain-containing protein (Q583F3)
Organism: Trypanosoma brucei brucei (strain 927/4 GUTat10.1)
Subcellular location: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
Interaction partners:
- DNA replication licensing factor MCM4
- DNA replication licensing factor MCM5
- Uncharacterized protein
- DNA replication complex GINS protein SLD5
- Cell division cycle 45
- DNA replication licensing factor MCM3
- DNA helicase
- GINS subunit domain-containing protein
- Uncharacterized protein
- DNA polymerase II subunit 2
Sequence:
MIKNYFDLSSILSNEELIPVTFTTPLFGLGKDVNPRTAEGETHDEVQVGSTATLPLWAAVAFRQVGHIVPQVPSRYTTSVFREFKTDPLAVSLHAKSPYYYEAGLLLCAMLPTGDGNRLAGQLFRLYQLRYLKIIRAAAKKGFDLSDVREKLCESERDLLDALIRGMEEERQWYRSAF
Protein: Uncharacterized protein C594.02c (O74505)
Organism: Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Subcellular location: Endoplasmic reticulum membrane {ECO:0000269|PubMed:16823372}; Multi-pass membrane protein {ECO:0000269|PubMed:16823372}.
Interaction partners:
- Uncharacterized membrane protein C18H10.18c
- Uncharacterized membrane protein C30D10.09c
- Probable lipase C14C8.15
- TBC domain-containing protein C23D3.03c
- Putative mannan endo-1,6-alpha-mannosidase C1198.07c
- GTPase-activating protein gyp3
- Putative lysophosphatidic acid:oleoyl-CoA acyltransferase
Sequence:
MAPAVFTSDYWKKYFSNKKKPTVKNTSDIDLLHINRGRQPFDEGLSINEDSFFYRHNIHVPRIVYLIIVACGSFIITGGIEFAIAYGMYKKTETSVRLWRLPDTLSGDAAVTNFVQAIVTYWVESILVQGDLRSGLVKPIYFGWWPENFLLREVLRAKPRYHFKFIVFRWMEWLVFVGLRGLVWSVPLWFLFWPATVGILCAPGRHEGNDYYFNNYPAPQVFKLIFGGGEGFVLTPWIAFLHMYMYGHYLHVAKNQKSLPKTSDLEQQRGTSSSQPSENDANITALPKPEPKMYENSDLTPARTPVTPAPLEKPVNLAPEVVEPTNAAASPLQLNAPKLTDVDDSALAYDPTKVQDGEDRFVHNDVPLENAENPSRFVHSDAPIDMTHTTTVISEAQNLPSTLLPQDGNAVHHDTDAPSLSNVRKSVDSPRVPPSFSDDAVSSFSLVTAPSINNVGGSTAPSVNNQEREYDYDDTSSRSSTLTERPVVH
Protein: Adenine DNA glycosylase (EC 3.2.2.31) (MutY homolog) (rMYH) (Q8R5G2)
Organism: Rattus norvegicus (Rat)
Function: Involved in oxidative DNA damage repair. Initiates repair of A*oxoG to C*G by removing the inappropriately paired adenine base from the DNA backbone. Possesses both adenine and 2-OH-A DNA glycosylase activities.
Subcellular location: Nucleus {ECO:0000250|UniProtKB:Q9UIF7}. Mitochondrion {ECO:0000250|UniProtKB:Q99P21}.
Interaction partners:
- N-glycosylase/DNA lyase
- Endonuclease III-like protein 1 lyase)
- DNA mismatch repair protein
- Endonuclease 8-like 3
- G/T mismatch-specific thymine DNA glycosylase
- Uracil-DNA glycosylase
- DNA mismatch repair protein Msh2
- DNA repair nuclease/redox regulator APEX1
- Flap endonuclease 1
- DNA polymerase lambda
Sequence:
MKKLRASVRSHKKQPANHKRRGKCALSSSQAKPSGLDGLAKQKREELLKTPVSPYHLFSDIADVTAFRRNLLSWYDQEKRDLPWRKRVKEETNLDRRAYAVWVSEVMLQQTQVATVIDYYTRWMQKWPTLQDLASASLEEVNQLWSGLGYYSRGRRLQEGARKVVEELGGHVPRTAETLQQLLPGVGRYTAGAIASIAFDQVTGVVDGNVIRVLCRVRAIGADPTSSFVSHHLWDLAQQLVDPARPGDFNQAAMELGATVCTPQRPLCNHCPVQSLCRAHQRVGQGRLSALPGSPDIEECALNTRQCQLCLPSTNPWDPNMGVVNFPRKASRRPPREEYSATCVVEQPGATGGPLILLVQRPNSGLLAGLWEFPSVTLEPSGQHQHKALLQELQHWSAPLPTTPLQHLGEVIHVFSHIKLTYQVYSLALEGQTPASTTLPGARWLTWEEFRNAAVSTAMKKVFRVYEEHRRGTCKGSKRPQVCTPSSRKKPSRGQQVLDRFFQRHIPTHKPNSTTQ
Protein: Tyrosine-protein kinase (EC 2.7.10.2) (D3ZD03)
Organism: Rattus norvegicus (Rat)
Interaction partners:
- Interferon alpha/beta receptor 1
- Tyrosine-protein kinase
- Suppressor of cytokine signaling 3
- Suppressor of cytokine signaling 1
- Interleukin 10 receptor subunit beta
- Signal transducer and activator of transcription
- Signal transducer and activator of transcription 3
- Interleukin-10 receptor subunit alpha
- Interleukin-12 receptor subunit beta-1
- Interleukin-13 receptor subunit alpha-1
Sequence:
MVTSMPLCGRRAASEDSKADGTEAQPLVPTGRLMVLLHWPGPEGGEPWVTFSQPSLTAEEMCIHIAHKVGITPPCLNLFALYDAQAKVWLPPNHVLDTSQDATLRLYFRMRFYFRNWHGMNPQEPAVYRCGFPGAETSSDHAEQGVQLLDSASFEYLFEQGKHEFMNDVVSLRDLSSEEEIHHFKNESLGMAFLHLCHLALNRGVPLEEMAREISFKNCIPHSFRQHIRQHNVLTRLRLRRVFRRFLQAFQPGHLSQQVVMVKYLATLERLAPRFGSEHIPVCHLEVLAQPERDPCYIQNSGQTTGDPGPELASGPATHEVLVTGTGGIQWRPLQTQDSERGHSRGNPQGSQSGKKPKAPESGEHLAGSPQEPPWTYFCDFQDISHVVLKERRVHIHLQDNKCLLLCLCSQAEALSFVALVDGYFRLTADSSHYLCHEVAPPRLVTSIQNGIHGPLMDPFVQAKLWPEDGLYLIQWSTSHLHRLILTVAHRNPASRNGPRGLRLRKFPITQQPGAFVLDGWGRSFDSLGDLRQALQGCSLRAGDDCFPLHHCCLPRPREISNLVIMRGSRAHTRPLNLSQLSFHRVHQDEITQLSHLGQGTRTNVYEGLLSVGGPNEGKVDSGCPSGPDRGSGQQLRVVLKVLDPSHHDIALAFYETASLMSQVSHMHLAFLHGVCVRGSENIIVAEFVEHGPLDVWLRRQRGRVPMPWKMVVAQQLASALSYLEDKNLVHGNVCGRNILLARLGLEEGTNPFIKLSDPGVGQGALSREERVERIPWTAPECLSGGANSLGTATDMWGFGATLLEICFDGEAPLQGRGPSEKERFYTKKHQLPEPSCPELATLTRQCLSYEPAQRPSFRTILRDLTRLQPQNLVGTSTVNSDSPASDPTVFHKRYLKRIRDLGEGHFGKVSLYCYDPNNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHSVGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLTYCDSSQSPPTKFIELIGVTQGQMTVLRLTELLERGERLPRPDRCPCEIYHLMKNCWESEASFRPTFQNLVPILKTAQEKYQGQVPSVFSVC
Protein: LYR motif-containing protein 4 (Q8K215)
Organism: Mus musculus (Mouse)
Function: Stabilizing factor, of the core iron-sulfur cluster (ISC) assembly complex, that regulates, in association with NDUFAB1, the stability and the cysteine desulfurase activity of NFS1 and participates in the [2Fe-2S] clusters assembly on the scaffolding protein ISCU (By similarity). The core iron-sulfur cluster (ISC) assembly complex is involved in the de novo synthesis of a [2Fe-2S] cluster, the first step of the mitochondrial iron-sulfur protein biogenesis. This process is initiated by the cysteine desulfurase complex (NFS1:LYRM4:NDUFAB1) that produces persulfide which is delivered on the scaffold protein ISCU in a FXN-dependent manner. Then this complex is stabilized by FDX2 which provides reducing equivalents to accomplish the [2Fe-2S] cluster assembly. Finally, the [2Fe-2S] cluster is transferred from ISCU to chaperone proteins, including HSCB, HSPA9 and GLRX5 (By similarity). May also participates in the iron-sulfur protein biogenesis in the cytoplasm through its interaction with the cytoplasmic form of NFS1 (By similarity).
Subcellular location: Mitochondrion {ECO:0000250|UniProtKB:Q9HD34}. Nucleus {ECO:0000250|UniProtKB:Q9HD34}.
Interaction partners:
- Frataxin, mitochondrial
- Cysteine desulfurase
- Iron-sulfur cluster assembly enzyme ISCU
- Acyl carrier protein, mitochondrial
- Ferredoxin-2, mitochondrial
- Adrenodoxin, mitochondrial
- Iron-sulfur cluster assembly factor IBA57, mitochondrial
- Glutaredoxin-related protein 5, mitochondrial
- Selenocysteine lyase
- NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
Sequence:
MAASSRAQVLDLYRAMMRESKHFSAYNYRMYAVRRIRDAFRENKNVKDPVEIQALVNKAKRDLEIIRRQVHIGQLYSTDKLIIENQEKPRT