wanglab/gogpt-training-data huggingface dataset:
Protein: Ribosome-releasing factor 2, mitochondrial (RRF2mt) (Elongation factor G 2, mitochondrial) (EF-G2mt) (mEF-G 2) (O94429)
Organism: Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Function: Mitochondrial GTPase that mediates the disassembly of ribosomes from messenger RNA at the termination of mitochondrial protein biosynthesis. Not involved in the GTP-dependent ribosomal translocation step during translation elongation.
Subcellular location: Mitochondrion {ECO:0000255|HAMAP-Rule:MF_03059}.
Interaction partners:
- Small ribosomal subunit protein bS6m
- Small ribosomal subunit protein uS3
- Large ribosomal subunit protein bL12m
- Small ribosomal subunit protein bS16m
- Large ribosomal subunit protein uL29
- Large ribosomal subunit protein bL9m
- Large ribosomal subunit protein bL27m
- Small ribosomal subunit protein uS9m
- Large ribosomal subunit protein bL36m
- Large ribosomal subunit protein uL24
Sequence:
MLRIVWKPLKIRLPVWRRYQSNISINSIRNVGIIAHIDAGKTTLTEKMLYYGGFTSHFGNVDTGDTVMDYLPAERQRGITINSAAISFTWRNQRINLIDTPGHADFTFEVERSVAVLDGAVAIIDGSAGVEAQTKVVWKQATKRGIPKVIFVNKMDRVGSSLGSTIRSIYTNLDCPYPLVLQLPVYSDGLQERKFLGILDILQQKMILWDTSDNKLGTDGTHVQELPIPESHMERFIEARNALVMSLCDVDETLCDEYLENEDSLAFTNDRLFKIIKQKTISGNVVPVLCGSSLKNIAVQPIMDAIIDYLPSPVEFYEKNASKETSSDKIISLDKRPLLAKIFKVIHHASRGILTYVRVNEGTLSRGMMMFNPRTKKSERAIRLYNVFADQTQEVDCISAGNIGVISGIKQFHTGDIIINKENSKNFHEYLSGNQSVISIPEPVCIASIEPYSLKDEPALLEALANMNREDPSFRYTQDLENGQLLIQGMGIMHLQVSYERLVSEFGARASLGKVQVGYRETLIDVSFNSVTLSTENKENLIINVYLIPISDEGDETLKKYFSEGEIQKVRSKGQEDGVLFYGWKPENSCTLPDHLSFQRIQENIYFGIVAGLSHGPLHGFPLTNLQSFCTISSFLSNDFPLSLLTQASMKATKNAVFSLYKRSPKSFRILEPYMDVTITTPEEYVGIVSKDLVGKRGATIKEITEIGKNAASKDSQIAIGILGERYLPADEPSSVKANNASSLLQSSSVIKCIRAQVPLEQILDYNSVISSLTKGNAKFLMSHPMESQTPKLVNYGSSFHPMSMQRQKRIFP
Protein: Intraflagellar transport protein 46 homolog (A7MBP4)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Function: Forms part of a complex involved in intraflagellar transport (IFT), the bi-directional movement of particles required for the assembly, maintenance and functioning of primary cilia. Plays a role in early embryonic development.
Subcellular location: Cytoplasm, cytoskeleton, cilium basal body {ECO:0000250|UniProtKB:Q9DB07}. Cell projection, cilium {ECO:0000250|UniProtKB:Q9DB07}.
Interaction partners:
- Intraflagellar transport protein 70A
- Intraflagellar transport 52 homolog
- Intraflagellar transport protein 56
- Intraflagellar transport 88 homolog.
- Intraflagellar transport 81 homolog.
- Intraflagellar transport 74.
- Intraflagellar transport protein 57 homolog
- Intraflagellar transport 27 homolog
- Intraflagellar transport 80 homolog
- Intraflagellar transport protein 22 homolog
Sequence:
MASVAYICSLPVNTSRDQVSLATVHRLVFMERSERQKIQLTTNQPYDESFEVNAEEAASVHTPSPRQIVSRRTGRQKQSTMSGYAGEKLEEDTKRKKEPPPGPRGANKNDEEEDEDDDDDDDDDDSDDTESDEEEEEPGSAPEGAYDPADYEHLPVTGEIKELFQYITRYTPQTIELDHKLKPFIPDFIPAVGDIDAFLKVPRPDGKPDNLGLLVLDEPCTKQSDPTVLSLWLSENSKQHNVTEVKVKSIENPEKNPKAIDNWIESISELHRSKPPATVHYTRPMPDIDSLMQEWPSEFEELLGKVNLPTADIDCDLAEYVDMICGILDIPVYKNRIHSLHVLFTLYSEFKNSQHFKSATDGQKSDTPPASRSATAEIERLTLD
Protein: Imidazoleglycerol-phosphate dehydratase (IGPD) (EC 4.2.1.19) (P06633)
Organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Interaction partners:
- Histidinol-phosphate aminotransferase
- Imidazole glycerol phosphate synthase hisHF
- Histidine biosynthesis trifunctional protein
- 1-
- ATP phosphoribosyltransferase
- N-
- 3-isopropylmalate dehydrogenase
- L-2-aminoadipate reductase
- Orotidine 5'-phosphate decarboxylase
- Phosphoribosylaminoimidazole carboxylase
Sequence:
MTEQKALVKRITNETKIQIAISLKGGPLAIEHSIFPEKEAEAVAEQATQSQVINVHTGIGFLDHMIHALAKHSGWSLIVECIGDLHIDDHHTTEDCGIALGQAFKEALGAVRGVKRFGSGFAPLDEALSRAVVDLSNRPYAVVELGLQREKVGDLSCEMIPHFLESFAEASRITLHVDCLRGKNDHHRSESAFKALAVAIREATSPNGTNDVPSTKGVLM
Protein: Mekk1, isoform D (EC 2.7.11.25) (Q9VE37)
Organism: Drosophila melanogaster (Fruit fly)
Interaction partners:
Sequence:
MTRNRIGALEEDMPPEDELAAHYEAFGTTPPRTRLKIKNRDWERKQKVVNVTASADLPASVGGTPKKTRTARSRVLRRNTMDCALLNEMFVNDESKRTDKRLQSLLRDSEREMKNSLATTAVAAPRGNSFHETAHPLESLDQIMPLNSEAMAPIPLRIASKVVESCNRYRCVSSRPIGYRSSAPPLAFAAQLPAGMLRSDGRATPGLGKRKDFHETFANLIKLGSVDRQDAKLSQEEHTWQTELKDLIWLELQAWQADRTVEQQDKYLFEARQGVSDLLTHIINYKFQPRYRREPSLISLDSGTHSDSNSNASSPLPSKMCQGCMSLYCKDCMDHQELALREVEGMLTRLEAAEALYPSSQAMGALHPIYKSQSFVGRIKSMCLWYNITKQNKLKLSILGKILARLQDEKFSWPVCTSSYIATDSGSSSASGVENDDSAVNSMDSSKPPSMAGSASRKGVTPCHKVQFMLNDATHVPGETSSSNESTSTEVSQWSSECSHSHMRKGSMHDINIFSVEPLGTCSSNGTGEQSTGLYRKFIENVLKSRGLAKSLAFLHKLHNVALYKAHIALEKPGAEDFDYESDAESIEEDVPRLDPEISREQVVELRTYGYWSEEAQSINLPSYIPTFVFLSGIPLQFMHEFLRMRLETRPVRPNPLSLEQLMKELREGLTLALTHRERYQRHITTALVENEAELGSYISILNHYDATVRKTFELYLEYIDQLVLVAVPEGNQKSVLEKEWMFTKLISPMIKGMHTLASQKFCGIISKLLRSISERLVKRTVELDQQIDGTADTDDNEEVKWQLLTICRETQSLLTVERERSIKVLFFAKTFCRDVETTDFHREHYEHDVANQQHDFICSDVKAAFKLLQQDVLQVRNKLTAIIEGVQKRCCLSNMRDLDEQDKQAVLSRTREILHQGYKFGFEYHKDVIRLFEQKIMDQKDSGAHTVDLALGIIAYAKMWMHFVMERCERGRGMRPRWASQGLEFLILACDPQITQHLDDDEFEALKQQMDRCISHVIGITSEPEKVAKKKASPRTRKTSSPATSRSRTPTRTPMSAGMVLNPNTPPLQSPPYNKLLHPQFSLKEDVSGTSYSPVDSSDYVDTPCQRSANGELRLLVPQTPPTPASPGKSSLESTPLALRQERVRDAVNRLDMDLEDGLRERRLIGQVKSLNSSDKVHIRARSVHFRWHRGIKIGQGRFGKVYTAVNNNTGELMAMKEIAIQPGETRALKNVAEELKILEGIKHKNLVRYYGIEVHREELLIFMELCSEGTLESLVELTGNLPEALTRRFTAQLLSGVSELHKHGIVHRDIKTANIFLVDGSNSLKLGDFGSAVKIQAHTTVPGELQGYVGTQAYMAPEVFTKTNSDGHGRAADIWSVGCVVVEMASGKRPWAQFDSNFQIMFKVGMGEKPQAPESLSQEGHDFIDHCLQHDPKRRLTAVELLEHNFCKYGRDECSSEQLQMQVRGSFRRNVATSSS
Protein: C-type lectin domain family 12 member B (Macrophage antigen H) (Q2HXU8)
Organism: Homo sapiens (Human)
Function: Inhibitory receptor postulated to negatively regulate immune and non-immune functions. Upon phosphorylation, recruits SH2 domain-containing PTPN6 and PTPN11 phosphatases to its ITIM motif and antagonizes activation signals. Although it inhibits KLRK1/NKG2D-mediated signaling, it does not bind known ligands of KLRK1/NKG2D and therefore is not its inhibitory counterpart. May limit activation of myeloid cell subsets in response to infection or tissue inflammation. May protect target cells against natural killer cell-mediated lysis. May negatively regulate cell cycle and differentiation of melanocytes via inactivation of STAT3.
Subcellular location: Cell membrane {ECO:0000269|PubMed:17562706}; Single-pass type II membrane protein {ECO:0000255}.
Interaction partners:
- C-type lectin domain family 12 member A
Sequence:
MSEEVTYATLTFQDSAGARNNRDGNNLRKRGHPAPSPIWRHAALGLVTLCLMLLIGLVTLGMMFLQISNDINSDSEKLSQLQKTIQQQQDNLSQQLGNSNNLSMEEEFLKSQISSVLKRQEQMAIKLCQELIIHTSDHRCNPCPKMWQWYQNSCYYFTTNEEKTWANSRKDCIDKNSTLVKIDSLEEKDFLMSQPLLMFSFFWLGLSWDSSGRSWFWEDGSVPSPSLFSTKELDQINGSKGCAYFQKGNIYISRCSAEIFWICEKTAAPVKTEDLD
Protein: Transmembrane protein 184A (Q4QQS1)
Organism: Rattus norvegicus (Rat)
Function: Acts as a heparin receptor in vascular cells. May be involved in vesicle transport in exocrine cells and Sertoli cells (By similarity).
Subcellular location: Cell membrane {ECO:0000269|PubMed:26769966}; Multi-pass membrane protein {ECO:0000255}. Cytoplasm, perinuclear region {ECO:0000269|PubMed:26769966}. Early endosome membrane {ECO:0000250|UniProtKB:Q3UFJ6}; Multi-pass membrane protein {ECO:0000305}. Endosome {ECO:0000250|UniProtKB:Q3UFJ6}. Cytoplasmic vesicle, secretory vesicle membrane {ECO:0000250|UniProtKB:Q3UFJ6}. Cytoplasmic vesicle membrane {ECO:0000250|UniProtKB:Q1RMW2}; Multi-pass membrane protein {ECO:0000255}. Note=Colocalizes with CAV1 (PubMed:26769966). {ECO:0000269|PubMed:26769966}.
Interaction partners:
- Potassium channel tetramerization domain containing 14
Sequence:
MRNASGFLKTAGAPLVSATWLPPSPPPAMPMVAAGPQMERVDNGSQGAPQLFLTSALARGVSGVFVWTALLLTGHQIYSHLRSYTVPREQRFVIRLLFIVPIYAFDSWLSLLLLGGHPYYVYFDSVRDCYEAFVIYSFLTLCFQYLGGESAIMAEIRGKPIRSSCFYGTCCLRGMSYSITFLRFCKQATLQFCIVKPVMALITIILQAFDKYHDGDFNIHSGYLYVTLVYNASVSLALYALFLFYFATRDLLRPFEPVLKFLTIKAIIFLSFWQGMLLAILERCGVIPEVQAVDGTRVGAGTLAAGYQNFLICIEMLFASLALRYAFPSQVYSEKKNSPAPPAPMQSISSGLKETISPQDIVQDAIHNFSPAYQQYTQQSTHEAPGPGQGGHPSPSTHPGPASGSGGGKKSRNIEKRMLIPSEDL
Protein: Skywalker, isoform C (Q9VIH6)
Organism: Drosophila melanogaster (Fruit fly)
Subcellular location: Cytoplasmic vesicle membrane {ECO:0000256|ARBA:ARBA00004156}. Endomembrane system {ECO:0000256|ARBA:ARBA00004184}; Peripheral membrane protein {ECO:0000256|ARBA:ARBA00004184}. Synapse {ECO:0000256|ARBA:ARBA00034103}.
Interaction partners:
Sequence:
MVGKVLGIKDLEQFSSRRSSVYVDPECDKFFELPLFIAASSNDITTKCQCFQFSPGKEPALRSYTEIQQLLQQGKKRDVKNILRENSWPINSPIRAQLWPMLCGQHQTKQQMLDGFYWEMVHQVFGTTELSEKPIMLPAFVDATHCLPYHLTSTGRAVADRIVNVLGYDCPDITYSPVLYPITSILLHFMSEEEAYICLAGLVGSKEKVFINQTKLQHEVTWKTVMQIAKKHTKSATSYFQRICPGLKLERIFMDWCWWILAGLPFQHLVRIMDCYFHEGIKVLYRVALVILNLFHKECQSNNEWSPDNIKNDIGNALIKFCKKIPVSPAKLLHAAFSIRGLSTQYISRIFIKTEMLLKSRSVLTSGSKQLIKSRSSDNLPTSQSQVNIQMMSHTLTIREHFGLPGTKNFIKTWTDRQFLFTLWSWLPVRITMYQPVLLYTTEEHGCSLTTFYVRVEQHEPTLLMIKTCNNEVFGAYCSSRWFERNVKDDKGQRQAYFGTGETFLFSLYPERAKYPWVGIEGDKDLGHSSELFMAADSKMITIGGGEGQAIWMDENIRFGKTDSCKTFNNPPLCPSGDFEIRVLEVYGFVGI
Protein: Polyamine transporter 3 (Q06451)
Organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Function: Cell membrane polyamine/proton antiporter, involved in the detoxification of excess polyamines in the cytoplasm. Recognizes spermine, but not spermidine.
Subcellular location: Cell membrane {ECO:0000269|PubMed:12562762, ECO:0000269|PubMed:14562095}; Multi-pass membrane protein {ECO:0000269|PubMed:12562762, ECO:0000269|PubMed:14562095}.
Interaction partners:
- Polyamine transporter 2
- Quinidine resistance protein 2
- Transcriptional activator HAA1
- Putative vacuolar protein sorting-associated protein TDA6
- Protein YRO2
- Glutathione peroxidase-like peroxiredoxin 2
- ATP-dependent permease PDR12
- Serine/threonine-protein kinase HRK1
- Azole resistance protein 1
Sequence:
MNRQESINSFNSDETSSLSDVESQQPQQYIPSESGSKSNMAPNQLKLTRTETVKSLQDMGVSSKAPVPDVNAPQSSKNKIFPEEYTLETPTGLVPVATLHSIGRTSTAISRTRTRQIDGASSPSSNEDALESDNNEKGKEGDSSGANDEAPDLDPEIEFVTFVTGDPENPHNWPAWIRWSYTVLLSILVICVAYGSACISGGLGTVEKKYHVGMEAAILSVSLMVIGFSLGPLIWSPVSDLYGRRVAYFVSMGLYVIFNIPCALAPNLGSLLACRFLCGVWSSSGLCLVGGSIADMFPSETRGKAIAFFAFAPYVGPVVGPLVNGFISVSTGRMDLIFWVNMAFAGVMWIISSAIPETYAPVILKRKAARLRKETGNPKIMTEQEAQGVSMGEMMRACLLRPLYFSVTEPVLVATCFYVCLIYSLLYAFFFAFPVIFGELYGYKDNLVGLMFIPIVIGALWALATTFYCENKYLQIVKQRKPTPEDRLLGAKIGAPFAAIALWILGATAYKHIIWVGPASAGLAFGFGMVLIYYSLNNYIIDCYVQYASSALATKVFLRSAGGAAFPLFTIQMYHKLNLHWGSWLLAFISTAMIALPFAFSYWGKGLRHKLSKKDYSIDSIE
Protein: Protein phosphatase 2C homolog 3 (PP2C-3) (EC 3.1.3.16) (Q09173)
Organism: Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Function: Has an important role in osmotic stability and cell shape control. It may negatively regulate the osmosensing signal transmitted through wis1 map kinase.
Subcellular location: Cytoplasm {ECO:0000250|UniProtKB:P34221}. Nucleus {ECO:0000250|UniProtKB:P34221}.
Interaction partners:
- Tyrosine-protein phosphatase 2
- Protein phosphatase 2C homolog 1
- Tyrosine-protein phosphatase 1
- Mitogen-activated protein kinase sty1
- Putative serine/threonine-protein phosphatase C26H8.05c
- Uncharacterized N-acetyltransferase C9.02c
Sequence:
MGQTLSEPVTEKHSVNGSNEFVLYGLSSMQGWRISMEDAHSAILSMECSAVKDPVDFFAVYDGHGGDKVAKWCGSNLPQILEKNPDFQKGDFVNALKSSFLNADKAILDDDQFHTDPSGCTATVVLRVGNKLYCANAGDSRTVLGSKGIAKPLSADHKPSNEAEKARICAAGGFVDFGRVNGNLALSRAIGDFEFKNSNLEPEKQIVTALPDVVVHEITDDDEFVVLACDGIWDCKTSQQVIEFVRRGIVAGTSLEKIAENLMDNCIASDTETTGLGCDNMTVCIVALLQENDKSAWYKKIADRVAANDGPCAPPEYAENHGPGWRSGDNNKKVIVPPNFHQVKLNGSDGYDKDANENSKEDDSTNGSLAAGFRWKEHFFPHKAEEENSSSETDIVNSNKDVADDHKEAVSAAD
Protein: ADP,ATP carrier protein 1, chloroplastic (ADP/ATP translocase 1) (Adenine nucleotide translocase 1) (Q39002)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: May function as an ATP importer.
Subcellular location: Plastid, chloroplast membrane {ECO:0000269|PubMed:9025303}; Multi-pass membrane protein {ECO:0000269|PubMed:9025303}.
Interaction partners:
- Chloroplast envelope quinone oxidoreductase homolog
- Protein TIC 20-II, chloroplastic
- D-xylose-proton symporter-like 3
- Glucose-6-phosphate/phosphate translocator 1, chloroplastic
- Plastidal glycolate/glycerate translocator 1, chloroplastic
- Protein CLT2, chloroplastic
Sequence:
MEAVIQTRGLLSLPTKPIGVRSQLQPSHGLKQRLFAAKPRNLHGLSLSFNGHKKFQTFEPTLHGISISHKERSTEFICKAEAAAAGDGAVFGEGDSAAVVASPKIFGVEVATLKKIIPLGLMFFCILFNYTILRDTKDVLVVTAKGSSAEIIPFLKTWVNLPMAIGFMLLYTKLSNVLSKKALFYTVIVPFIIYFGAFGFVMYPLSNYIHPEALADKLLTTLGPRFMGPIAILRIWSFCLFYVMAELWGSVVVSVLFWGFANQITTVDEAKKFYPLFGLGANVALIFSGRTVKYFSNLRKNLGPGVDGWAVSLKAMMSIVVGMGLAICLLYWWVNRYVPLPTRSKNKKEKPKMGTMESLKFLVSSPYIRDLATLVVAYGISINLVEVTWKSKLKAQFPSPNEYSAFMGDFSTCTGVATFTMMLLSQYVFNKYGWGVAAKITPTVLLLTGVAFFSLILFGGPFAPLVAKLGMTPLLAAVYVGALQNIFSKSAKYSLFDPCKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALIQQFMILSFGSLANSTPYLGMILLVIVTAWLAAAKSLEGQFNSLRSEEELEKEMERASSVKIPVVSQDESGNGSLGESPSSSPEKSAPTNL
Protein: Casein kinase II subunit alpha (CK II subunit alpha) (EC 2.7.11.1) (P18334)
Organism: Caenorhabditis elegans
Function: Casein kinases are operationally defined by their preferential utilization of acidic proteins such as caseins as substrates. The alpha chain contains the catalytic site. May participate in Wnt signaling. Modulates two aspects of male mating behavior; response to hermaphrodite contact and vulval location, acting in the same pathway as lov-1 and pkd-2.
Subcellular location: Cell projection, axon {ECO:0000269|PubMed:16481400}. Cell projection, cilium {ECO:0000269|PubMed:16481400}. Cell projection, dendrite {ECO:0000269|PubMed:16481400}. Perikaryon {ECO:0000269|PubMed:16481400}. Note=Enriched in cilia in male sensory neurons.
Interaction partners:
- Casein kinase II subunit beta
- FACT complex subunit spt-16
- Ribosomal RNA-processing protein 7 homolog
- Nucleolar protein 6
- DiSHevelled related
- DiSHevelled related
- FUN14 domain-containing protein fndc-1
- FACT complex subunit SSRP1-A
- G-patch domain-containing protein
- NUC153 domain-containing protein
Sequence:
MPPIPSRARVYAEVNPSRPREYWDYEAHMIEWGQIDDYQLVRKLGRGKYSEVFEGFKMSTDEKVVVKILKPVKKKKIKREIKILENLRGGTNIITLLDVVKDPISRTPALIFEHVNNSDFKQLYQTLSDYDIRYYLYELLKALDFCHSQGIMHRDVKPHNVMIDAEKRELRLIDWGLAEFYHPRQDYNVRVASRYFKGPELLVDYQCYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTDELYEYIARYHIDLDPRFNDILGRHSRKRWERFIHAENQHLVTPEALDFLDKLLRYDHAERLTAQEAMGHEYFRPVVEAHARANGTEQADGQGASNSASSQSSDAKIDGA
Protein: Something about silencing protein 10 (UTP3 small subunit processome component) (Zgc:92127) (Q66I02)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Subcellular location: Nucleus, nucleolus {ECO:0000256|ARBA:ARBA00004604}.
Interaction partners:
- WD repeat domain 36
- U3 small nucleolar RNA-associated protein 25 homolog
- NOP14 nucleolar protein homolog
- UTP18 small subunit processome component.
- BMS1 ribosome biogenesis factor
- U3 small nucleolar RNA-associated protein 11
- WD repeat domain 46.
- Nucleolar complex protein 4 homolog
- U3 small nucleolar ribonucleoprotein protein MPP10
- Si:dkey-251i10.3
Sequence:
MVRARRAVKKPRTKKQQEYDSDDPEAYTNEAIPDKKSSSYVEDKVDEFHNEKISKLLARGVPEISDEEDEDKAVEVMPLTLSESDEDDDEEKEEEEDDDDDEEDGTDMESDLEGKKDDDLPNDLAWGNKKKIFYDTDYATKKGKSLEEIEAEDKEEEDEATKIQKRLAAKLSEEDYDLNLLEEFVVDAEVEKEVKKEERIVKDLKTLSQKEKLKLLKKESPELLELIQDFKAKLTELRDEVQPLVKMVKNGRIPPGKGANYIITKQQLYLNYCTNISFYLVLKAKRIPAHNHPVIERLLTYRNLINELGAVDARLAPQLRQLLSGEKPDRLPKRLPGSKHTKLTEKAGLEEAEESESDEEANLRFYNAMAEKQKLKRKKSEMQNEDKLEENEEMEGDAKRRITYEMSKNKGLTPKRKKIDRNPRVKHREKFRRAQIRRKGQVREVRHEEARYSGEWSGIRAGVKRSVKLK
Protein: S-adenosylmethionine decarboxylase/ornithine decarboxylase (EC 4.1.1.17, EC 4.1.1.50) (Q8IJ77)
Organism: Plasmodium falciparum (isolate 3D7)
Interaction partners:
- Ribosomal protein L16, mitochondrial, putative
- Arginase
- Ornithine aminotransferase
- Spermidine synthase
- Aspartate aminotransferase
- Glutamine synthetase, putative
- aspartate carbamoyltransferase
- carbamoyl-phosphate synthase
- Diphthine--ammonia ligase
- indole-3-glycerol-phosphate synthase
Sequence:
MNGIFEGIEKRVVIKLKESFFKGNRNVNSFLDIPKELWEEKLKYIGCSIVSEISEDKNERRGERCRVYLLSESSLYIFDDSLFIKTCGKTRVLFFIPFVVDLLIYHMDNVGIIEKNCVYDETFIENEKFHNIAEFIKEHFLYCFFTHMNYRNKTKDGYFEQEYPHKSLEDEKKFFEFFFKNVQMYNTHLPMEKMHYIFFYSSDDVHMTDIASTFKFCSEIHLFGINKYNEKNQFHDAYLNNKSLNLFTRVHEDNLKLYDSSDADKEVTTHIYSTRGTYEDTGMVNCVDVIYKNESTLLNRNNIENIPSIENKESNNNSRCCHNNNYSGSCHNIVSVVPSERNNDHVHHRHYEDTLNRSNISAEDNNRNAQLEKEKDEDVRRDDEENKVLIKMIDTNLYECINYNKESFLYNEFYFTPCGYSCNVSEKNNYFCVHYSPEDSVSYVSVEVSSNLSCDRFLDFMHKQLNFYNGKYMFMINYVFCEESNNMSKMVPDDDNNNYSSGKSCVYYQDLNKKEKEEYYRLNKKLRNDLFINSKQFYELHTFTERTVGFMRVQYFVYKLRDVVKCVEKETLLARSSSCLFMFNNIKRNDVHDDYVTKSSNGGVIKQLTERDVDDMYEYALNFCKQNKIVVVDTNTFFDASKRKENLIKLEKVQTNEKDEYEEKDEVYRRGNNELSSLDHLDSKNNLIHMYYEKNKCDIINKDDENSTIATNNNDNNNDNNNDSSSYDKSITISRSSSCNNSHLSYSSFDNNHGNEKMKDYISVDENNNNNNNNNNNNNNNNNKNNNVLLTLQRNSDDENGKDKDNEKNDVSLENNMEKNYKEEIWNYYTKNKVEVKTLEKVLNENIDTSVVCINLQKILAQYVRFKKNLPHVTPFYSVKSNNDEVVIKFLYGLNCNFDCASIGEISKVIKLLPNLSRDRIIFANTIKSINSLIYARKENINLCTFDNLDELKKIYKYHPKCSLILRINVDFKNYKSYMSSKYGANEYEWEEMLLYAKKHNLNIVGVSFHVGSNTKNLFDFCLAIKLCRDVFDMSSNMGFNFYIINLGGGYPEELEYDNAKKHDKIHYCTLSLQEIKKDIQKFLNEETFLKTKYGYYSFEKISLAINMSIDHYFSHMKDNLRVICEPGRYMVAASSTLAVKIIGKRRPTFQGIMLKDLKDHYDPLNFAQQENKKQDETKINHNNDNNDNNDNNDNNDNNINNNNNNQKGGQGNIMNDLIITSTNDSTNKKNDHSSSQVIQNVSCTIRDKEGDNIKINTHTINNPNINGKENTVDGDNINIAHKNIGNNFSSSNSKLGNITNIKKKVVNINDNRYNYFSYYVSDSIYGCFSGIIFDEYNRCPIYVIKNKNNPNQNFMNFNLYLANVFGQSCDGLDMINSITYLPECYINDWLLYEYAGAYTFVSSSNFNGFKKCKKVYIFPESKPSLKGQPNKHW
Protein: TRUD domain-containing protein (Q38A69)
Organism: Trypanosoma brucei brucei (strain 927/4 GUTat10.1)
Interaction partners:
Sequence:
MFPPCLKQSNQKRGCVWGDMTVVESPFTMHDRERLVGIRFSLLNAHLVGREGIGAFKRLVVSMKTLYSDFVVRELSLLYNDGKPLVLESLQHTEADAKPHDTVGAKRQRDAESGGRDGVADIGEVALEGIRAKLEGVVPAEELDSVTKSLCAGEPSVTLRCSLTKPQRTRIHEVVRELLGGRYISRAESGTLVIERATHATRRADERRLNPVRSQKFLHFTLYKENIDSNHALREVASYLHVPTRSLLFSGTKDKRAVTLQRVAVRGVSPEKLIGINSRSFGQDRKVKVCSFRTMDHGLRLGDAVGNHFLIALRLLPESRDIDSDTLNTVESTINREGVVNYFGTQRFGTTDVLTGDVGIQLLSGHFENALRLVFRSKSMVEPSMLAAVDALEKGSFEEAVKLVPHYCHQERDMLNHLVDSPNDFLGSFSKIPRTMSMMYFHAVQSLIWNIMASKRLEVGVVPQVGDLVLKSRYTARLRCNQQSDCLEGLDLSANEMDDTTEEKERGLPEVVHLTTEDVATGLFQIADILLPVPGPDEKLQYPTVSACDRSAYIETLALKGAESLVRASNPLVKLFHYHGAYRHLVVKPRGFRMRLCNTKSLREPIIPTDLELLTGSKGCVEEATGASVSNGDGTNLPCKAIVVEFSLPPGAYATCVLREFCDCRTEGYHRASSKAAGNSEPSAG
Protein: DUF21 domain-containing protein At4g14230 (CBS domain-containing protein CBSDUF2) (Q4V3C7)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Subcellular location: Membrane {ECO:0000305}; Multi-pass membrane protein {ECO:0000305}.
Interaction partners:
- Putative reverse transcriptase
- AT5G45030 protein
- NOL1/NOP2/sun family protein
- TLC domain-containing protein At5g14285
- rRNA
- MLO-like protein 11
Sequence:
MHPINAVVAARMLAGISQSNALQSEAIPFGSLEWITYAGISCFLVLFAGIMSGLTLGLMSLGLVELEILQRSGTPKEKKQSAAIFPVVQKQHQLLVTLLLFNALAMEGLPIYLDKIFNEYVAIILSVTFVLFVGEVIPQAICTRYGLAVGANLVWLVRILMVLSYPISFPIAKMLDWVLGHNDPLFRRAQLKALVSIHGEAAGKGGELTHDETTIISGALDLTEKTAQEAMTPIESTFSLDVNSKLDREAMDKIQARGHSRVPVYSDNPKNVIGLLLVKSLLTVRPETGTLVSAVGIRRIPRVPANMPLYDILNEFQKGSSHMAAVVKVKGKSKGHPSTLHEENSGESNVSSNNSELTAPLLLKREGNHDSVIVRIDKANGQSFISEAGRQGFSHTSEEIEDGDVIGIITLEDVFEELLQEEIVDETDEYIDVHKRIRVATVAAVAISSLARAPSGRRLLGPKGSGGPKTPKASSTPKPDDKLMGTMTGPPQGNN
Protein: tRNA modification GTPase MnmE (EC 3.6.-.-) (Q8YN91)
Organism: Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)
Function: Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34.
Subcellular location: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00379}.
Interaction partners:
- tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG
- tRNA-specific 2-thiouridylase MnmA
- CcdA protein
- Large ribosomal subunit protein uL15
- Ribosomal RNA small subunit methyltransferase G
- Ribosome biogenesis GTPase A
- Pseudouridine synthase
- Large ribosomal subunit protein uL11
- Large ribosomal subunit protein bL21
- rRNA methylase
Sequence:
MAITGTIAAIATAIVPQQGSVGIVRVSGSQAIAIAQTLFDAPGKQVWESHRILYGYIRHPQTRQIVDEALLLLMKAPRSYTREDVVEFHCHGGIIAVQQVLQLCLESGARLAQPGEFTLRAFLNGRLDLTQAESIADLVGARSPQAAQTALAGLQGKLAHPIRQLRANCLDILAEIEARIDFEEDLPPLDDEAIISDIENIAAEISQLLATKDKGELLRTGLKVAIVGRPNVGKSSLLNAWSQSDRAIVTDLPGTTRDVVESQLVVGGIPVQVLDTAGIRETSDQVEKIGVERSRQAANTADLVLLTIDAATGWTTGDQEIYEQVKHRPLILVMNKIDLVEKQLITSLEYPENITQIVHTAAAQKQGIDSLETAILEIVQTGKVQAADMDLAINQRQAAALTQAKMSLEQVQATITQQLPLDFWTIDLRGAIQALGEITGEEVTESVLDRIFSRFCIGK
Protein: Flagellar basal body rod protein FlgB (Putative proximal rod protein) (P0ABW9)
Organism: Escherichia coli (strain K12)
Function: Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body (By similarity).
Subcellular location: Bacterial flagellum basal body {ECO:0000250}.
Interaction partners:
- Flagellar P-ring protein
- Flagellar basal-body rod protein FlgG
- Flagellar hook protein FlgE
- Flagellar motor switch protein FliG
- Flagellar L-ring protein
- Flagellar motor switch protein FliN
- Flagellar hook-associated protein 2
- Basal-body rod modification protein FlgD
- Flagellar hook-basal body complex protein FliE
- Flagellar basal-body rod protein FlgF
Sequence:
MLDKLDAALRFQQEALNLRAQRQEVLAANIANADTPGYQARDIDFASELKKVMQRGRDATSVVALTMTSTQHIPAQALTPPTAELQYRIPDQPSLDGNTVDMDRERTQFADNSLQYQMSLSALSGQIKGMMNVLQSGN
Protein: Uncharacterized kinase C24B10.02c (EC 2.7.1.-) (Q9P7K3)
Organism: Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Subcellular location: Cytoplasm {ECO:0000269|PubMed:16823372}. Nucleus {ECO:0000269|PubMed:16823372}.
Interaction partners:
- Nicotinamide/nicotinic acid mononucleotide adenylyltransferase
- Putative glutamine-dependent NAD
- NAD-dependent histone deacetylase sir2
- NAD-dependent protein deacetylase hst4
- Uncharacterized kinase C3H5.11
- NAD-dependent protein deacetylase hst2
- NAD-capped RNA hydrolase
- Putative nicotinamide mononucleotide adenylyltransferase
- General alpha-glucoside permease
- Glutathione S-transferase omega-like 2
Sequence:
MATKVEEINKLKKKNLHFRQCSADSLSNSSMQFDLSGLNTPVGELATSNLPSPAHPPFGELHQESRTSNSSAMHIENVVASRLMYNEVANGSFALEPKNILVVTKPRKHSLVYKTAEITKYILTIGTPETKVYVDMRLARSKRFSAHNIAKEANTDIDRIKYWNPYICLIKPSIFDLAITIGDNSTLLYTSWLFQKIGPPVLSFSDDDVPGFLTHFSLSNYQQHLYQVLTQNVSLRFCSRLQCSFHKYDEKTKQYSLASTTYSLDEILISRGEHPFISNLNVYNNSELMTVVQADGLVVATPTGSTNISANAGGSLVHPALNAILVTPVCPHTLSFRPIILPDYNVLNVEIPLDSRSSAFFSVDRHESVEMHRGDYLSIVTSHYPFTTIQNPGYQWTKVLEDKFNWNVRERQKPFSRKPSLSDVKDTSDDKFDITDNSYCREFSADIDG
Protein: NAC domain-containing protein 104 (ANAC104) (Protein XYLEM NAC DOMAIN 1) (Q8GWK6)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Probable transcription factor that influences tracheary elements and xylem development by negatively regulating secondary cell wall fiber synthesis and programmed cell death.
Subcellular location: Nucleus {ECO:0000255|PROSITE-ProRule:PRU00353}.
Interaction partners:
- NAC domain-containing protein 73
- NAC domain-containing protein 10
- Transcription factor MYB46
- Transcription factor MYB83
- Homeobox protein knotted-1-like 7
- Transcription factor MYB63
- Transcription factor
- Cysteine protease XCP1
- Cysteine protease XCP2
- MYB transcription factor
Sequence:
MNLPPGFRFFPTDEELVVHFLHRKASLLPCHPDVIPDLDLYHYDPWDLPGKALGEGRQWYFYSRKTQERVTSNGYWGSMGMDEPIYTSSTHKKVGIKKYLTFYLGDSQTNWIMQEYSLPDSSSSSSRSSKRSSRASSSSHKPDYSKWVICRVYEQNCSEEEDDDGTELSCLDEVFLSLDDLDEVSLP
Protein: Transcription factor MYB51 (Myb-related protein 51) (AtMYB51) (Protein HIGH INDOLIC GLUCOSINOLATE 1) (Transcription factor HIG1) (O49782)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Transcription factor positively regulating indolic glucosinolate biosynthetic pathway genes.
Subcellular location: Nucleus {ECO:0000255|PROSITE-ProRule:PRU00625, ECO:0000269|PubMed:17461791}.
Interaction partners:
- Cytochrome P450 81F2
- Tryptophan N-monooxygenase 1
- Transcription factor MYC2
- Tryptophan N-monooxygenase 2
- Cytosolic sulfotransferase 16
- Probable WRKY transcription factor 33
- Transcription factor MYC3
- Transcription factor MYC4
- Indole glucosinolate O-methyltransferase 2
- Indole glucosinolate O-methyltransferase 1
Sequence:
MVRTPCCKAELGLKKGAWTPEEDQKLLSYLNRHGEGGWRTLPEKAGLKRCGKSCRLRWANYLRPDIKRGEFTEDEERSIISLHALHGNKWSAIARGLPGRTDNEIKNYWNTHIKKRLIKKGIDPVTHKGITSGTDKSENLPEKQNVNLTTSDHDLDNDKAKKNNKNFGLSSASFLNKVANRFGKRINQSVLSEIIGSGGPLASTSHTTNTTTTSVSVDSESVKSTSSSFAPTSNLLCHGTVATTPVSSNFDVDGNVNLTCSSSTFSDSSVNNPLMYCDNFVGNNNVDDEDTIGFSTFLNDEDFMMLEESCVENTAFMKELTRFLHEDENDVVDVTPVYERQDLFDEIDNYFG