wanglab/gogpt-training-data huggingface dataset:
Protein: Lipophorin receptor 1, isoform K (A8JRD0)
Organism: Drosophila melanogaster (Fruit fly)
Subcellular location: Membrane {ECO:0000256|ARBA:ARBA00004167}; Single-pass membrane protein {ECO:0000256|ARBA:ARBA00004167}.
Interaction partners:
- Terribly reduced optic lobes, isoform AT
Sequence:
MAIESRSTSTASETTKTAIKSTTSSKSPVTFGNLGEKRRAEQLFRCACANFNLLLLTLMLGFGKCCTATPTPLNTPSTNTPTSAVSPHNPQTLDESGSLSKVIDGKAFINMGFKFLNVSGKIGTPLGIGQSLEAKCDEKQFQCHSGDCIPIRFVCDGDADCKDHSDEQIKECKFIEATCSSDQFRCGNGNCIPNKWRCDQESDCADGSDEANELCMNACPNNEFKCQTVDQCIPRSWLCDGSNDCRDKSDEAHCRARTCSPDEYACKSGEGQCVPLAWMCDQSKDCSDGSDEHNCNQTCRADEFTCGNGRCIQKRWKCDHDDDCGDGSDEKECPVVPCDSVAEHTCTNGACIAKRWVCDGDPDCSDGSDERSCANVTKTTTPCLSHEYQCKDRITCLHHSWLCDGDRDCPDGDDEHTANCKNVTCRADQFQCGDRSCIPGHLTCNGDKDCADGSDERDCGLSLSLGINQGGCNATSEFDCGGGQCVPLSKVCDKRKDCPDGEDEPAGKCGINECASKNGGCMHQCIDLKVGHHCECHEGYKLSPDKRNCQDINECEVPGKCSQICVNEIGGFKCECEAGYMRDPKNHTRCKASEGHASLLLARRHDIRKIALDHMEMTSIVNSTKAATALDFVFRTGMIFWSDVTTQSIYKAPIDEGNEKTVVLTKSSVTSDGLAVDWIYNHVYFTDTHKCTIELTNFEGSMGKVLVKDSLDIPRSIALDPIEGWMYWSDWGASPRIERAGMDGSHRTTIISYDVKWPNGITLDLVKKRIYWVDGKLNVISSANYDGSQRSQVLYSGEYLRHPFSITTFEDNVYWTDWDKQAVFKANKFTGEDVEPVTAMHMLQHPMVVHVYHPYRQPDGVNHCQSVNGHCSHLCLPAPRINERSPRISCACPTGLKLMVDGLMCVEDPLYLPPVTRPPRARKTKPRPKSPRRRLPTGVQVGHADIRIEINDDLQLSTRLPLLPTTFVADQRPVKNHTQIEKTTTPSEQPDSGFIALVVIASLSGFAVLLSVLLLIGYRYCSKRRINSMNFENPIYRKTTTTEDHFSLRKNLPARIYDHTSVMDEEYSPVIGISSY
Protein: Glutathione S-transferase rho (Gstr1 protein) (Rho-class glutathione S-transferase) (Q1L907)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Interaction partners:
- Glutathione S-transferase 3, mitochondrial
- Glutathione S-transferase omega 1
- glutathione transferase
- Glutathione S-transferase theta 1b.
- Glutathione S-transferase
- glutathione transferase
- Glutathione S-transferase omega 2.
- Glutathione peroxidase
- Iron-sulfur cluster assembly enzyme b
- Thymocyte nuclear protein 1
Sequence:
MAQNMLLYWGTGSPPCWRLMIALEEKQLQGYKHKLLSFDKKEHQSPEVKALNPRAQLPTFKHGEIVVNESFAACLYLESVFKSQGTRLIPDNPAEMALVYQRMFETENLQQKMYEVAFYDWLVPEGERLESALKRNKEKLIEELKLWEGYLEKMGKGSYLAGKNFSMADVVCFPVIAYFPRLQCPKERCPRLMEYYEMVKDRPSIKASWPPEWLEKPVGEDILKSL
Protein: Dynein axonemal intermediate chain 3 (WD repeat-containing protein 63) (B2RY71)
Organism: Mus musculus (Mouse)
Function: Acts as a negative regulator of cell migration, invasion, and metastasis downstream of p53/TP53, through inhibition of Arp2/3 complex-mediated actin polymerization (By similarity). Via its association with the multisubunit axonemal dynein complex, is potentially involved in the regulation of cilia function. May play a role in osteogenesis of dental tissue-derived mesenchymal stem cells.
Subcellular location: Cytoplasm {ECO:0000250|UniProtKB:Q8IWG1}.
Interaction partners:
- Dynein axonemal heavy chain 5
- Dynein, axonemal, heavy chain 9
- Dynein axonemal heavy chain 2
- Dynein axonemal intermediate chain 7
- Dynein axonemal intermediate chain 4
- Thioredoxin domain-containing protein 3
- Dynein axonemal heavy chain 1
- Cytoplasmic dynein 1 intermediate chain 2
- Dynein, axonemal, heavy chain 10
- Dynein, axonemal, heavy chain 6
Sequence:
MAPKPPKSPKGQKKGKKNMKQQLLVPEEEEPMNMESMGHPEIYPLVLTTKTQEIFNCRVDEDMTDEQTYKLIKKEDILADLQNRAAVSDFHPVKKIVREYPGEELLLVYDKDFKYGLNFYLIGTEDGKENFLKPPEVPEEQEEPKEHVQEDVYVYNPPVSKPWVSLGSEKEIEEESVQESGKRVTYMISRKRSEFGAPVTFSDQNASSVKDAYIECTSYPEKNYTLSQVEKDVGLQVIAEVKDTSTQTKWAFPKNATTQYYPREFSEEEKSLIGKSKSLVDFFNNVSTSVEVALQQNEIMNTFIDDWKNLAEEESTFGDKTDTHLKEYQSFTDLHNTMEKMITCVSWHPTIFGLIVVSVAVRLSYEERVQNSGRLLLQPSLLLFWSFSDPIHPQLMLESPDDIFCFEFCPSDPNIIAGGCINGQIVLWDITAHADRIENIKTGGHRSKKTSLKPMFLLEPDSNKESMYIRHCAVSSIENGHRKVITDIHWLPDSFEINRMGSVFENRSGINCQLVTCSADCTICFWDIRPQKPAVTAAAAASAATTATNNANSQQSPVEKKKEENIDIPFDVPSTFLHLDLSWKPLSRLKLSKGDTSLDHCPTKLSLGEDPFLCKIQGTSSIHIILRDKMLSQIKMVKTSEINPYQNLEAGIANILKPIEDFCTKFFVGTEEGEVIYTDWKMERDSDTGRLMAKKPVSLYTVHDGAVHTIQRSPFFNDIVLTVGGWNVAIWKEEVMTGPLLQTCCGPKRYTAGHWSLTRPGVFYIGREDGNVDIWDLLEKTHEPAQSQNICITMITYIKPWTFSSKQQFIAVADYYGTLHILEIPWTLSHPSLNEVSSVNYYFEREVRHLEYVQQRKEIREQEKIDMALELVKKKAKIYQKTKEQMEAELKLEYESYLDLEKSVLFALGLSKVSEKKSYLDSH
Protein: Regulatory protein MIG1 (Regulatory protein CAT4) (P27705)
Organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Function: Involved in glucose repression of the SUC, GAL and MAL genes as well as of the CAT8 gene. Binds to two sites in the upstream region of SUC2.
Subcellular location: Nucleus.
Interaction partners:
- Carbon catabolite-derepressing protein kinase
- General transcriptional corepressor CYC8
- General transcriptional corepressor TUP1
- Hexokinase-2
- Regulatory protein CAT8
- 5'-AMP-activated protein kinase subunit gamma
- Protein SIP4
- SNF1 protein kinase subunit beta-3
- SNF1 protein kinase subunit beta-1
- Regulatory protein MIG2
Sequence:
MQSPYPMTQVSNVDDGSLLKESKSKSKVAAKSEAPRPHACPICHRAFHRLEHQTRHMRIHTGEKPHACDFPGCVKRFSRSDELTRHRRIHTNSHPRGKRGRKKKVVGSPINSASSSATSIPDLNTANFSPPLPQQHLSPLIPIAIAPKENSSRSSTRKGRKTKFEIGESGGNDPYMVSSPKTMAKIPVSVKPPPSLALNNMNYQTSSASTALSSLSNSHSGSRLKLNALSSLQMMTPIASSAPRTVFIDGPEQKQLQQQQNSLSPRYSNTVILPRPRSLTDFQGLNNANPNNNGSLRAQTQSSVQLKRPSSVLSLNDLLVGQRNTNESDSDFTTGGEDEEDGLKDPSNSSIDNLEQDYLQEQSRKKSKTSTPTTMLSRSTSGTNLHTLGYVMNQNHLHFSSSSPDFQKELNNRLLNVQQQQQEQHTLLQSQNTSNQSQNQNQNQMMASSSSLSTTPLLLSPRVNMINTAISTQQTPISQSDSQVQELETLPPIRSLPLPFPHMD
Protein: Protein transport protein SEC23 (Q8IGT0)
Organism: Drosophila melanogaster (Fruit fly)
Subcellular location: Cytoplasmic vesicle, COPII-coated vesicle membrane {ECO:0000256|RuleBase:RU365030}; Peripheral membrane protein {ECO:0000256|RuleBase:RU365030}; Cytoplasmic side {ECO:0000256|RuleBase:RU365030}. Endoplasmic reticulum membrane {ECO:0000256|RuleBase:RU365030}; Peripheral membrane protein {ECO:0000256|RuleBase:RU365030}; Cytoplasmic side {ECO:0000256|RuleBase:RU365030}.
Interaction partners:
Sequence:
MTTYEEFIQQNEDRDGVRLTWNVWPSSRIEASRLVVPLACLYQPLKERPDLPPIQYEPVLCTRSNCRAILNPLCQVDYRAKLWVCNFCFQRNPFPPQYAAISEQHQPAELIPGFSTIEYTITRTPTMPPVFIFLVDTCMDEEELDALKDSLQMSLSLLPTNALVGLITFGKMIQVHELGAEGCSKSYVFRGTKDLTAKQVQDMLGIGRGAAPGPQQQQHLPGQPAGAAAPVPPAHRFLQPIGQCDAALGDLLSELQRDPWPVPQGKRYLRSTGAALSIAVGLLECTYPNTGGRIMTFVGGPCSQGPGQVVDDELKHPIRSHYDIHKDNVRFMKKAIKHYDALALRAATNGHSVDIYSCALDQTGLLEMKQLCNSTGGHMVMGDSFNSSLFKQTFQRVFARDGRNDLKMAFNATLEVKCSRELKISGGIGSCVSLNVKSPSVSDVEIGMGNTVQWKLCTLNPSSTVAYFFEVVNQHAAPIPQGGRGCIQFSTQYQHPSGQRRIRVTTLARNWADATSNVHHISAGFDQEAAAVLMARMVVYRAETDEGPDILRWVDRQLIRLCQKFGEYSKDDPNSFRLSQNFSLFPQFMYHLRRSQFLQVFNNSPDETTFYRHMLMREDLTQSLIMIQPILYSYSFNGPPEPVLLDTASIQADRILLMDTFFQILIYHGETIAQWRALKYQDMPEYENFKQLLQAPVDDAQEILQTRFPMPRYIDTEHGGSQARFLLSKVNPSQTHNNMYAYGQDGGAPVLTDDVSLQLFMEHLKKLAVSTTT
Protein: Flap endonuclease GEN-like 1 (OsGEN-L) (Protein OsGEN-like) (EC 3.1.-.-) (OsRAD) (Q64MA3)
Organism: Oryza sativa subsp. japonica (Rice)
Function: Endonuclease which cleaves flap structures at the junction between single-stranded DNA and double-stranded DNA. Possesses both single-stranded and double-stranded DNA-binding activities. Involved in early microspore development, but does not alter meiosis or tapetal cells development. Possesses Holliday junction (HJ) resolvase activity in vitro. Cleaves HJ at symmetrically related sites of the branch point.
Subcellular location: Nucleus {ECO:0000269|PubMed:15792960}.
Interaction partners:
- Proliferating cell nuclear antigen
- Os01g0685500 protein
- DNA polymerase delta catalytic subunit
- ATP-dependent DNA helicase
- Os01g0660500 protein
- DNA ligase
- DNA polymerase delta small subunit
- DNA replication ATP-dependent helicase/nuclease
- Crossover junction endonuclease MUS81
- Os05g0358200 protein
Sequence:
MGVGGSFWDLLKPYARHEGAGYLRGRRVAVDLSFWVVSHSAAIRARSPHARLPHLRTLFFRTLSLFSKMGAFPVFVVDGQPSPLKSQVRAARFFRGSGMDLAALPSTEAEASADALVQPRNAKFTRYVEDCVELLEYLGMPVLRAKGEGEALCAQLNNQGHVDACITSDSDAFLFGAKTVIKVLRSNCKEPFECYNMADIESGLGLKRKQMVAMALLVGSDHDLHGVPGFGPETALRFVQLFDEDNVLAKLYEIGKGVYPFIGVSAPNIDDLPSPSTKSLPRARSPHCSHCGHPGNKKNHIKDGCNFCLVDSLENCVEKPAGFICECPSCDKARDLKVQRRNENWQIKVCKRIAAETNFPNEEIINLYLNDDNLDNENGVPLLTWNKPDMEILVDFLSFKQNWEPAYIRQRMLPMLSTIYLREMASSQSKSFLLYDQYKFHSIQRIKIRYGHPYYLVKWKRVTRSMISNDPPSKQTELEGKNDKVEVLDGDDEVVDEEEEEPTMISETTELLDEPDVPQVLDDDKDCFLLTDEDIELVNAAFPDEAQRFQEEQRLKEAKSIARKSKLNVAGFETPKGPRPSGVQLSIKEFYRSKKGLSGDSGKDGSRKSSDVDLSKNLPKSVRRRLLFD
Protein: Syntaxin-43 (AtSYP43) (Q9SUJ1)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Contributes to the regulation of secretory and vacuolar transport pathways in the post-Golgi network, and to the maintenance of the Golgi apparatus and trans-Golgi network (TGN) morphologies. Vesicle trafficking protein that functions in the secretory pathway and mediates liposome fusion. Required for extracellular resistance responses to a fungal pathogen. Also involved in the protection of chloroplasts from salicylic acid-dependent biotic stress. Also involved in the protection of chloroplasts from salicylic acid-dependent biotic stress.
Subcellular location: Golgi apparatus, trans-Golgi network membrane {ECO:0000269|PubMed:15342965, ECO:0000269|PubMed:22307646}; Single-pass type IV membrane protein {ECO:0000255}.
Interaction partners:
- Vacuolar protein sorting-associated protein 45 homolog
- Vesicle transport v-SNARE 12
- Vesicle transport v-SNARE 11
- Syntaxin-61
- VAMP-like protein YKT62
- Vesicle transport v-SNARE 13
- VAMP-like protein YKT61
- Syntaxin-52
- Syntaxin-51
- Vesicle transport v-SNARE family protein
Sequence:
MATRNRTLLFRKYRNSLRSVRAPMGSSSSSTLTEHNSLTGAKSGLGPVIEMASTSLLNPNRSYAPVSTEDPGNSSRGTITVGLPPDWVDVSEEISVYIQRARTKMAELGKAHAKALMPSFGDGKEDQHQIETLTQEVTFLLKKSEKQLQRLSAAGPSEDSNVRKNVQRSLATDLQNLSMELRKKQSTYLKRLRLQKEDGADLEMNLNGSRYKAEDDDFDDMVFSEHQMSKIKKSEEISIEREKEIQQVVESVSELAQIMKDLSALVIDQGTIVDRIDYNIQNVASTVDDGLKQLQKAERTQRQGGMVMCASVLVILCFIMLVLLILKEILL
Protein: Beta-glucosidase 23 (AtBGLU23) (EC 3.2.1.21) (Protein PHOSPHATE STARVATION-RESPONSE 3.1) (Q9SR37)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Beta-D-glucosidase active on scopolin > esculin >> 4-MU-glucoside >> DIMBOA-glucoside. No activity with pNP-glucoside, oNP-glucoside and sinigrin as substrates. May possess beta-D-fucosidase activity. Required for the beneficial interaction with the endophytic fungus P.indica. May participate in the control of root colonization by P.indica by repressing defense responses and modulating other responses required for a mutualistic interaction.
Subcellular location: Endoplasmic reticulum lumen {ECO:0000255|PROSITE-ProRule:PRU10138, ECO:0000269|PubMed:12581307, ECO:0000269|PubMed:15155889, ECO:0000269|PubMed:15919674, ECO:0000269|PubMed:18248598, ECO:0000269|PubMed:19147648}. Note=Located in ER bodies.
Interaction partners:
- TSA1-like protein
- PYK10-binding protein 1
- Transcription factor NAI1
- Membrane protein of ER body 2
- PYK10-binding protein 2
- Membrane protein of ER body 1
- Jacalin-related lectin 34
- Inactive GDSL esterase/lipase-like protein 23
- MD-2-related lipid-recognition protein 3
- Beta-glucosidase 22
Sequence:
MVLQKLPLIGLLLLLTIVASPANADGPVCPPSNKLSRASFPEGFLFGTATAAYQVEGAINETCRGPALWDIYCRRYPERCNNDNGDVAVDFFHRYKEDIQLMKNLNTDAFRMSIAWPRIFPHGRKEKGVSQAGVQFYHDLIDELIKNGITPFVTVFHWDTPQDLEDEYGGFLSERIVKDFREYADFVFQEYGGKVKHWITFNEPWVFSHAGYDVGKKAPGRCSSYVNAKCQDGRSGYEAYLVTHNLLISHAEAVEAYRKCEKCKGGKIGIAHSPAWFEAHDLADSQDGASIDRALDFILGWHLDTTTFGDYPQIMKDIVGHRLPKFTTEQKAKLKASTDFVGLNYYTSVFSNHLEKPDPSKPRWMQDSLITWESKNAQNYAIGSKPLTAALNVYSRGFRSLLKYIKDKYANPEIMIMENGYGEELGASDSVAVGTADHNRKYYLQRHLLSMQEAVCIDKVNVTGYFVWSLLDNFEWQDGYKNRFGLYYVDFKNNLTRYEKESGKYYKDFLSQGVRPSALKKDEL
Protein: Endochitinase At2g43620 (EC 3.2.1.14) (O22841)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Interaction partners:
- F-box protein At2g18780
- GDSL esterase/lipase At1g58430
- Protease inhibitor
- RING-type E3 ubiquitin transferase
- Regulator of Vps4 activity in the MVB pathway protein
- At1g25420/F2J7_16
- Regulator of Vps4 activity in the MVB pathway protein
- Regulator of Vps4 activity in the MVB pathway protein
- Regulator of Vps4 activity in the MVB pathway protein
- Regulator of Vps4 activity in the MVB pathway protein
Sequence:
MATLRAMLKNAFILFLFTLTIMAKTVFSQQCGTTGCAANLCCSRYGYCGTTDAYCGTGCRSGPCSSSTTPIPPTPSGGAGGLNADPRDTIENVVTPAFFDGIMSKVGNGCPAKGFYTRQAFIAAAQSFDAYKGTVAKREIAAMLAQFSHESGSFCYKEEIARGKYCSPSTAYPCTPGKDYYGRGPIQITWNYNYGAAGKFLGLPLLTDPDMVARSPQVAFQCAMWFWNLNVRPVLDQGFGATTRKINGGECNGRRPAAVQSRVNYYLEFCRTLGITPGANLSC
Protein: Uncharacterized dipeptidase C965.12 (EC 3.4.13.19) (O59832)
Organism: Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Interaction partners:
- 4,5-DOPA dioxygenase extradiol-like protein
- Putative glutamine amidotransferase PB2B2.05
- Uncharacterized dipeptidase C3A11.10c
- Probable NADH-ubiquinone oxidoreductase C947.15c, mitochondrial
Sequence:
MTVDLREEKELAQQRFKEICKHAKIVDTHNDFPYLLRVQLRNKLQLAEFDFENGLTSHTDLVKMRQGQVGVQFFSCFIECKNPNYLYQDFDTPTTVVRDTLEQIDVTRRLVCKYNNDLKFVDCADDAIAAFRNNGKIAIALGVEGLHQVDTSLAVLRQYYSLGVRYITLTHNCDNPFATAASSITGGLPDRGLSAYGIECIFEMNRLGMMVDLSHVSHRTMHDALDVTKAPVIFSHSSAYTLTEHERNVRDDVLERLKTNGGVVQVNFYQDFIRKPGSDRATIDDAADHILHIIKVAGWEHVGLGSDFDGIPQGPKGLEDVSKYPDLICKIIERTNATNEQIEGLMGLNVLRVWKKTELVALQLSKKLEPIESSWSGRKWEFYSYAKEFPELFPDAYKLNEKSTVWNYDQPLNIEK
Protein: Protein mes1 (P41005)
Organism: Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Function: Specifically required for meiosis II (MII). Binds to slp1, an activator of the anapahase promoting complex/cyclcosome (APC/C), and counteracts its function in promoting proteolysis of cdc13. By suppressing the degradation of cdc13 at anaphase I this protein may help maintain a sufficient level of cdc2 kinase activity to complete MII.
Subcellular location: Cytoplasm {ECO:0000269|PubMed:16823372}. Nucleus {ECO:0000269|PubMed:16823372}.
Interaction partners:
- Meiotic fizzy-related protein 1
- Uncharacterized WD repeat-containing protein C343.17c
- Inner kinetochore subunit cnl2
- WD repeat-containing protein slp1
Sequence:
MVNTDNKENEPPNMEKAHMDSSNALYRVQRPLQRRPLQELSIELVKPSQTITVKKSKKSTNSSSYFAQLHAASGQNPPPSVHSSHKQPSKARSPNPLLSMR
Protein: Tropinone reductase homolog At2g29340 (EC 1.1.1.-) (F4IKM1)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Interaction partners:
- At3g12510
- AGAMOUS-like 89
- MADS-box family protein
- AGAMOUS-like 99
- MADS-box family protein
- strictosidine synthase
- MADS-box family protein
- Protein STRICTOSIDINE SYNTHASE-LIKE 11
- Protein STRICTOSIDINE SYNTHASE-LIKE 2
- AGAMOUS-like 91
Sequence:
MDKRWSLKGMTALVTGGASGIGYAIVEELAGFGARIHVCDISEAKLNQSLSEWEKKGFQVSGSVCDVASRPEREELMQTVSSQFDGKLNILVSNVGVIRSKPTTEYTEDDFAFHISSNVEAAYHFSQLSHPLLKASGYGSIIFVSSIAGVISFDAGSIYGLTKGALIQLAKNLACEWAKDGIRANAVAPNVINTPLSQSYLEDVSFKKALLSRTPLGRVGEPNEVASLVAFLCLPAASYITGQTICVDGGLTVNGFSYQPEEALLSRTSLRRVGEPNEVSSLVVFLCLPAASYITGQMVKPFVLMEV
Protein: Protoporphyrinogen oxidase 1, chloroplastic (EC 1.3.3.4) (SO-POX1) (Q9LRI8)
Organism: Spinacia oleracea (Spinach)
Function: Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX.
Subcellular location: Plastid, chloroplast thylakoid membrane {ECO:0000269|PubMed:10982422}; Peripheral membrane protein {ECO:0000305}; Stromal side {ECO:0000269|PubMed:10982422}. Plastid, chloroplast inner membrane {ECO:0000269|PubMed:10982422}; Peripheral membrane protein {ECO:0000305}; Stromal side {ECO:0000269|PubMed:10982422}. Note=Preferentially associates with the stromal side of the thylakoid membrane, but also localizes on the stromal side of the inner envelope membrane. {ECO:0000269|PubMed:10982422}.
Interaction partners:
Sequence:
MSAMALSSTMALSLPQSSMSLSHCRHNRITILIPSSSLRRRGGSSIRCSTISTSNSAAAANYQNKNIGTNGVDGGGGGGGVLDCVIVGGGISGLCIAQALSTKYSNLSTNFIVTEAKDRVGGNITTMEADGYLWEEGPNSFQPSDAVLTMAVDSGLKEELVLGDPNSPRFVLWNGKLRPVPSKLTDLPFFDLMSFPGKIRAGLGALGLRPSPPAHEESVEQFVRRNLGDEVFERLIEPFCSGVYAGDPSKLSMKAAFGRVWVLEQKGGSIIGGTLKTIQERKDNPKPPRDPRLPKPKGQTVGSFRKGLSMLPTAISERLGNKVKVSWTLSGIAKSSNGEYNLTYETPDGLVSVRTKSVVMTVPSYVASSLLRPLSDVAAESLSKFHYPPVAAVSLSYPKEAIRSECLIDGELKGFGQLHSRSQGVETLGTIYSSSLFPGRAPPGRTLILNYIGGDTNPGILDKTKDELAEAVDRDLRRILINPNAKAPRVLGVRVWPQAIPQFLIGHFDLLDAAKAALTDGGHKGLFLGGNYVSGVALGRCIEGAYESAAEVVDFLSQYSDK
Protein: 1,4-alpha-glucan-branching enzyme 2-1, chloroplastic/amyloplastic (AtSBE II-1) (EC 2.4.1.18) (Branching enzyme 3) (AtBE3) (Starch-branching enzyme 2-1) (O23647)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Catalyzes the formation of the alpha-1,6-glucosidic linkages in starch by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position.
Subcellular location: Plastid, chloroplast stroma {ECO:0000269|PubMed:18431481}. Plastid, amyloplast {ECO:0000250}.
Interaction partners:
- Alpha-glucan phosphorylase 2, cytosolic
- 4-alpha-glucanotransferase DPE2
- Alpha-glucan phosphorylase 1
- 4-alpha-glucanotransferase DPE1, chloroplastic/amyloplastic
- Probable starch synthase 4, chloroplastic/amyloplastic
- Starch synthase 3, chloroplastic/amyloplastic
- Granule-bound starch synthase 1, chloroplastic/amyloplastic
- Alpha-amylase 3, chloroplastic
- Alpha-amylase 1
- Probable alpha-amylase 2
Sequence:
MVYTISGVRFPHLPSIKKKNSSLHSFNEDLRRSNAVSFSLRKDSRSSGKVFARKPSYDSDSSSLATTASEKLRGHQSDSSSSASDQVQSRDTVSDDTQVLGNVDVQKTEEAQETETLDQTSALSTSGSISYKEDFAKMSHSVDQEVGQRKIPPPGDGKRIYDIDPMLNSHRNHLDYRYGQYRKLREEIDKNEGGLEAFSRGYEIFGFTRSATGITYREWAPGAKAASLIGDFNNWNAKSDVMARNDFGVWEIFLPNNADGSPAIPHGSRVKIRMDTPSGIKDSIPAWIKYSVQPPGEIPYNGVYYDPPEEDKYAFKHPRPKKPTSLRIYESHVGMSSTEPKINTYANFRDDVLPRIKKLGYNAVQIMAIQEHAYYASFGYHVTNFFAPSSRFGTPDDLKSLIDKAHELGLVVLMDIVHSHASKNTLDGLDMFDGTDGQYFHSGSRGYHWMWDSRLFNYGSWEVLRYLLSNARWWLEEYKFDGFRFDGVTSMMYTHHGLQVEFTGNYNEYFGYSTDVDAVVYLMLVNDLIHGLYPEAIVVGEDVSGMPAFCVPVEDGGVGFDYRLHMAVADKWIELLKKRDEDWQVGDITFTLTNRRWGEKCVVYAESHDQALVGDKTIAFWLMDKDMYDFMAVDRQATPRVDRGIALHKMIRLITMGLGGEGYLNFMGNEFGHPEWIDFPRTDQHLPDGRVIAGNNGSYDKCRRRFDLGDAEYLRYHGLQEFDRAMQNLEETYGFMTSEHQYISRKDEGDRVIVFERGNLLFVFNFHWTNSYSDYRIGCSVPGKYKIVLDSDNSLFGGFNRLDDSAEFFTSDGRHDDRPCSFMVYAPCRTAVVYAAVDDDDDDERSSLVPIGLLPEDV
Protein: Type 2A encapsulin shell protein (35 kDa antigen) (Major membrane protein I) (MMPI) (P46841)
Organism: Mycobacterium leprae (strain TN)
Function: Shell component of a type 2A encapsulin nanocompartment. Forms encapsulin nanocompartments about 24 nm in diameter from 60 monomers. Probably encapsulates at least cysteine desulfurase (CyD, AC O32975) and allows passage of cysteine into its interior, probably involved in sulfur metabolism (By similarity). Expression in M.smegmatis generates a multimeric protein, whereas expression in E.coli does not.
Subcellular location: Encapsulin nanocompartment {ECO:0000250|UniProtKB:Q55032}. Cytoplasm, cytosol {ECO:0000305|PubMed:7476185}. Cell membrane {ECO:0000305|PubMed:7476185}; Peripheral membrane protein {ECO:0000305|PubMed:7476185}. Note=Soluble or peripheral membrane protein. {ECO:0000305|PubMed:7476185}.
Interaction partners:
- Probable cysteine desulfurase 1
- Possible transcriptional regulator
Sequence:
MTSAQNESQALGDLAAGQLANATKTVPQLSTITPRWLLHLLNWVPVEAGVYRVNRVVNPERVAVKAEAGAGTEAPLPETFVDYETSPREYTLRTISTLLDIHTRVSDLYSSPHDQITQQLRLTIETIKERQECELVNSPEFGLLAQVTPEQTIRTFAGAPTPDDLDALITKVWKMPSFFLTHPQGIAAFGREATYRGVPPVVVSLFGAQFITWRGIPLIPSDKVPVQDGETKFILVRTGEERQGVVGLFQPGLVGEQAPGLSVRFTGINQAAIATYLVTLYTSLAVLTDDALAVLDNVAVDQFHEYK
Protein: Schlafen family member 8 (EC 3.1.-.-) (Schlafen-8) (mSLFN8) (B1ARD8)
Organism: Mus musculus (Mouse)
Function: Endoribonuclease that cleaves tRNAs and rRNAs. Cleaves tRNAs 11 nucleotides from the 3'-terminus at the acceptor stem. May be involved in immune system via regulation of inflammation.
Subcellular location: Cytoplasm {ECO:0000250|UniProtKB:Q68D06}.
Interaction partners:
Sequence:
METHPSLAVKWSCPDLTIYAGEVTIGEEDRNKMDSKKRKLEKTRITEAACALLNSGGGLIAMQMTNKSEHPVEMGQDLEKSLRELIMSPNMQAFFETKQQEDQFYIFVKSWSCRPEDGSTKPRICSLGSSLYCRSITSKVAMDSREAFEFLKDKKACIKYRPTDDGAPPAKIPRAMCQNSLESNPAFEIFQSKKLEYGQCLLFSESTSIEFKQFSTKHVQAYMKNIIPEYISAFANTQGGYLFIGVDDKRIILGCPKDNVDRDSLKTVANETISKVPVFHFCSSKDKDKVSYETRVIDVFQEGNLYGYLCVIKVEPFCCAVFSEAPISWMVDKEKGVYRLNTEEWVRMMVDFGPEASSKDLSKDFECQLSLCNSPPHCRPVYSKKGLQHKVDLQQRLFQVSPDCLKYTPESLWKELCSQHKRLKGLVKQQIRSFSCGLLILYRSWAVDLNLKEKQEVICDALLIAQNSPPILYTILGEQDEQGQDYCNHTAFTLKQKLVNTGGYTGRVCVMTKVLCLSSQNNIETNGGSVSPINYPSSYNLANIQEMQDLLQALVIVLLNFRSFLSDQLGCEILNLLTAQQYEILSKSLRKTRELFVHGLPGSGKTIIAMKIMEKIRNTFHCETDSILYICENQPLRDFIRAKRICQAVTRKTFMNYRFKTNSFQHIIVDEAQNFRTEDGNWYGKAKAISRRVKSCPGMFWIFLDYFQTSHLKESGLPDFSRQYPREELTQVVRNGDKIAEFLQKELQKIRDNPPCSIPRQSLNIVHEFKWSQSVSGNIKTEQFTLEDMVIYVADKCYDFLRKGYSLQDIAVLFSTDKEKKTYESMFLGEMRKRRRASEMNHAYLCDSNMFDSIRRFSGLERSIVFGINPIATEQPISHNLLLCLASRAMKHLYILYFSTPEGHSSTEAC
Protein: Eukaryotic translation initiation factor isoform 4E (eIF(iso)-4E) (eIF(iso)4E) (eIF-(iso)4F 25 kDa subunit) (eIF-(iso)4F p28 subunit) (mRNA cap-binding protein) (M1J8U6)
Organism: Prunus domestica (Garden plum)
Function: Component of the protein complex eIF4F, which is involved in the recognition of the mRNA cap, ATP-dependent unwinding of 5'-terminal secondary structure and recruitment of mRNA to the ribosome (By similarity). Recognizes and binds the 7-methylguanosine-containing mRNA cap during an early step in the initiation of protein synthesis and facilitates ribosome binding by inducing the unwinding of the mRNAs secondary structures (By similarity). Key component of recessive resistance to potyviruses such as the plum pox virus (PPV) strain D.
Subcellular location: Cytoplasm {ECO:0000269|PubMed:23382802}. Nucleus {ECO:0000269|PubMed:23382802}. Note=(Microbial infection) Binds to potyvirus viral genome-linked protein (VPg) in cytoplasm and nucleus. {ECO:0000269|PubMed:23382802}.
Interaction partners:
Sequence:
MATEVAAAVPPPQLDAEENSGLEAAAAEAKIQPSSGPHKLERKWTFWFDNQSKPKQGAAWGSSLRKAYTFETVQEFWCLYDQVFKPSKFPPNADFHLFRAGVEPKWEDPECANGGKWTVTSRSKASLDTMWLETLMALIGEQFDEADEICGVVASVRQRQDKLALWTRNAANEAAQMGIGRKWKEIIDVTDKITYSFHDDSKRERSAKPRYNV
Protein: Serine (Or cysteine) peptidase inhibitor, clade B, member 9f (Q80UK5)
Organism: Mus musculus (Mouse)
Interaction partners:
- NK21B
- NK26
- Cathepsin G
- Albumin
- Serine
- Thyroglobulin
- T-cell surface glycoprotein CD4
- Leukocyte elastase inhibitor
- Interleukin-4
- Granulocyte-macrophage colony-stimulating factor
Sequence:
MNTLSQANGTFAIHLLKVLCQDNPSKNVCYSPMSISSALAMVLLGAKGDTAVQICQALHLNPDEDVHQGFQLLLHNLNKQNNQKYCLRMANRLFVENTCELLPTFKESCLKFYHSEMEQLSFAKAAEESRQHINMWVSKQTNGKIPDLLSKDSVNSQTRLILANALYFHGTWCKRFEKNRTKEMPFKINKKETRPVQMMWREDTLFHAYVKEIQAQVLVMPYEGIDLNFVVLLPDEGVDISKVENNLTFEKLTAWTKPEFMNRTEFHVYLPKFQLQEDYDMNSLLQHLGILNVFDGSKADLSGMSTKENLCLSEFVHKCVVEVNEEGTEAAAASAVEFIFLCLGPDPETFCADHPFLFFIMHSTTNSILFCGRFSSP
Protein: BH-Pcdh-c (O88274)
Organism: Mus musculus (Mouse)
Interaction partners:
Sequence:
PFRRVTFSVVSQPQDPHQGSLQSCYDSGLEESETPSSKSSSGPRLGALPLPEDNYERTTPDGSVGEAEHMENDSRPLPDVALTGKCTRECDEYGHSDSCWMPVRTSPERKKSQPKLSTFMPVDERGSQEKLANGEAAIMGDRNRNLLNKKLTSSYETFSAASFSKNEEANPEDIPLTKTGEYKPSPVNTLTRREVYL
Protein: Non-selective voltage-gated ion channel VDAC2 (Outer mitochondrial membrane protein porin 2) (A0A024QZT0)
Organism: Homo sapiens (Human)
Subcellular location: Mitochondrion outer membrane {ECO:0000256|ARBA:ARBA00004294}.
Interaction partners:
Sequence:
MATHGQTCARPMCIPPSYADLGKAARDIFNKGFGFGLVKLDVKTKSCSGVEFSTSGSSNTDTGKVTGTLETKYKWCEYGLTFTEKWNTDNTLGTEIAIEDQICQGLKLTFDTTFSPNTGKKSGKIKSSYKRECINLGCDVDFDFAGPAIHGSAVFGYEGWLAGYQMTFDSAKSKLTRNNFAVGYRTGDFQLHTNVNDGTEFGGSIYQKVCEDLDTSVNLAWTSGTNCTRFGIAAKYQLDPTASISAKVNNSSLIGVGYTQTLRPGVKLTLSALVDGKSINAGGHKVGLALELEA