wanglab/gogpt-training-data huggingface dataset:
Protein: Candida glabrata strain CBS138 chromosome M complete sequence (Q6FII6)
Organism: Candida glabrata (strain ATCC 2001 / BCRC 20586 / JCM 3761 / NBRC 0622 / NRRL Y-65 / CBS 138) (Yeast) (Nakaseomyces glabratus)
Subcellular location: Membrane {ECO:0000256|ARBA:ARBA00004141}; Multi-pass membrane protein {ECO:0000256|ARBA:ARBA00004141}.
Interaction partners:
- Candida glabrata strain CBS138 chromosome L complete sequence
- Candida glabrata strain CBS138 chromosome F complete sequence
Sequence:
MRGFKFLKYLEVPVEERQTLSFLKNPDLVPIPKSHQTWGFWSNFAYWGTIAFTVGTWMGATAALTVGLSYPETIATFILGNALTIVYSLANCYPGWDWKVGYTLSQRFTFGIYGSAFGVIIRVLLSIVNYGSNAWLGGLCINLILNSWSHHYLELKNTLSPHVAMTTKELIGFVIFHIVCALCYLMKPYQINRILIIACAGTCFSMLGIIIYLCHANGGAGSLFHTQKTTVSGSDRAWAWVYMISYWFGAVSPGAVNQSDYSRFGSSLKGIYLGTIVGLMIPPNLVPAYGVIGASTTQELYGESMWMPTEICNYWLNHGYHPAARAASFFCGVFFALSQIAYTISNAGFASGMDLAGLLPKYVNIKRGAFFTAIVSVAVQPWNFYNSSSTFLTVMSSFGVVMVPILAVMICDNFIIRKRNYSASQAFILKGEYYFTKGFNWRAFIAMIVPMAPGLPGIAWQVNHNAFNNRGIVNFYYGDSFFAFVMSFCLYWILCIIFPFKINVLQDDKDYYGAFDEKTAIKKGMVPYSGLTEAERQEYFIPTANEVMREEQPTESDSEISRAYVEEGTEKGSTKDGVAEI
Protein: Tachykinin-related peptide 1 (TKRP-1) (P86575)
Organism: Nezara viridula (Southern green stink bug) (Cimex viridulus)
Subcellular location: Secreted {ECO:0000269|PubMed:19084564, ECO:0000305}.
Interaction partners:
Sequence:
GPSGFLGMR
Protein: Dynein axonemal assembly factor 10 (WD repeat-containing protein 92) (A8J3F6)
Organism: Chlamydomonas reinhardtii (Chlamydomonas smithii)
Function: Key assembly factor specifically required for the stability of axonemal dynein heavy chains in cytoplasm.
Subcellular location: Dynein axonemal particle {ECO:0000305|PubMed:30428028}.
Interaction partners:
- 1-phosphatidylinositol 4-kinase
Sequence:
MDLQNKPQILEHLHKSLTVTLYDCRWIPGTAKFVTLGSYARNTGCLQVYELEGPDLKTVKETEKKHSFKCGTFGASSLAERRLATGNFGGEVQIWDLENTAQPVFTAQAHASIVNAIDGCGGQAKGYGAPELATCGRDGCVRVWDVRQQDAPVAAFEPADPNNVRDCWCVAFGNSFNDNERCLLAGYDNGDVKMFDLRMNKVRWETNVRNGVCGLQFDRKDISMNKFAVCCLEAQFHVFDARTQHPKKGFASVSEKITAGATVWGAQHLPQNREVFMVSAGDGNLYLYKYHYPDQRKVKDHDGQELGVAGSVEMLNYKNISTQPVAGFDWSPDKEGLFACVAFDQAVRVGIVTKLNKV
Protein: Phosducin thioredoxin-like domain-containing protein (Q9U1X7)
Organism: Caenorhabditis elegans
Interaction partners:
- Guanine nucleotide-binding protein subunit beta-1
- Guanine nucleotide-binding protein subunit beta-2
- Polynucleotide 5'-hydroxyl-kinase nol-9
- Rab-GAP TBC domain-containing protein
- G-protein coupled receptors family 1 profile domain-containing protein
- Neuropeptide-Like Protein
- Fatty-acid and retinol-binding protein 1
- Casein kinase II subunit alpha
- G protein gamma domain-containing protein
- Casein kinase II subunit beta
Sequence:
MNLESRILDGKPAGYCSSSEGEEDDFKVVNDEDEHQANVMKRMGPSSNTGAKGVLNEFKAFREQTRLAVESKNQKLIEQAKKGMMIGSKEEREKAQREDDEDEDFEMTLEGLKAKRLREMRKIAANRVIEMTDKKQYSDAVDGSSSYLLCVLIYEPESDECEYLTRIVKILAADCPKTKFVRATSTLLEMSRAFRTNGVPCLQFYSNGNLIGNFVKISAILGQDYDCKKLTKFLRGQHIDLMAGGYASDSDNESEDDD
Protein: Krueppel-like factor 2 (Lung krueppel-like factor) (Q9ET58)
Organism: Rattus norvegicus (Rat)
Function: Transcription factor that binds to the CACCC box in the promoter of target genes such as HBB/beta globin or NOV and activates their transcription. Might be involved in transcriptional regulation by modulating the binding of the RARA nuclear receptor to RARE DNA elements (By similarity).
Subcellular location: Nucleus {ECO:0000250}.
Interaction partners:
- Transcription factor p65
- Nuclear factor NF-kappa-B p105 subunit
- Homeobox protein NANOG
- Sphingosine 1-phosphate receptor 1
- Thrombomodulin
Sequence:
MALSEPILPSFATFASPCERGLQERWPRNEPEAGSTDEDLNSVLDFILSMGLDGLGAENPPEPPPQPPPPAFYYPEPGAPPPYGTPAAGLGTELLRPDLDAPQGPALHGRFLLAPPGRLVKAEPPEVDGGGYGCAAGLARGPRGLKLEGALGATGACMRGPAGRPPPPSDTPPLSPDGPPRLPAPGPRNPFPPPFGPGPSFGGPGPALHYGPPAPGAFGLFDDAAAALGLAPPATRGLLTPPSSPLELLEAKPKRGRRSWPRKRAATHTCSYTNCGKTYTKSSHLKAHLRTHTGEKPYHCNWDGCGWKFARSDELTRHYRKHTGHRPFQCHLCDRAFSRSDHLALHMKRHM
Protein: Synaptonemal complex central element protein 2 (Central element synaptonemal complex protein 1) (Q6PIF2)
Organism: Homo sapiens (Human)
Function: Major component of the transverse central element of synaptonemal complexes (SCS), formed between homologous chromosomes during meiotic prophase. Requires SYCP1 in order to be incorporated into the central element. May have a role in the synaptonemal complex assembly, stabilization and recombination (By similarity).
Subcellular location: Nucleus {ECO:0000250|UniProtKB:Q505B8}. Chromosome {ECO:0000250|UniProtKB:Q505B8}. Note=Associates with chromatin. In prophase I stage of meiosis, localizes in the transverse central elements of the central region between lateral elements of the synaptonemal complexes. Found only where the chromosome cores are synapsed. Colocalizes with SYCE1 in the central elements (By similarity). {ECO:0000250|UniProtKB:Q505B8}.
Interaction partners:
- Synaptonemal complex central element protein 1
- Testis-expressed protein 12
- Synaptonemal complex protein 1
- Synaptonemal complex central element protein 3
- Synaptonemal complex protein 3
- Synaptonemal complex protein 2
- Protein SIX6OS1
- Deleted in azoospermia-like
- Cohesin subunit SA-3
- Structural maintenance of chromosomes protein 1B
Sequence:
MERQGVDVPHVKCKDQEPQPLGESKEHPRWEENCEEEAGGGPASASCQLTVLEGKSGLYFSSLDSSIDILQKRAQELIENINKSRQKDHALMTNFRNSLKTKVSDLTEKLEERIYQIYNDHNKIIQEKLQEFTQKMAKISHLETELKQVCHSVETVYKDLCLQPEQSLRLRWGPDHSRGKSPPRPGNSQPPDVFVSSVAETTSQATASEVQTNRDGEC
Protein: Dihydroxy-acid dehydratase, mitochondrial (DAD) (EC 4.2.1.9) (P39522)
Organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Function: Dihydroxyacid dehydratase that catalyzes the third step in the common pathway leading to biosynthesis of branched-chain amino acids. Catalyzes the dehydration of (2R,3R)-2,3-dihydroxy-3-methylpentanoate (2,3-dihydroxy-3-methylvalerate) into 2-oxo-3-methylpentanoate (2-oxo-3-methylvalerate) and of (2R)-2,3-dihydroxy-3-methylbutanoate (2,3-dihydroxyisovalerate) into 2-oxo-3-methylbutanoate (2-oxoisovalerate), the penultimate precursor to L-isoleucine and L-valine, respectively. Required for the synthesis of alpha-isopropylmalate which modulates the activity of LEU3 and subsequently regulates the expression of LEU1.
Subcellular location: Mitochondrion {ECO:0000269|PubMed:20008079, ECO:0000269|PubMed:22954227}.
Interaction partners:
- Branched-chain-amino-acid aminotransferase, cytosolic
- Ketol-acid reductoisomerase, mitochondrial
- 2-isopropylmalate synthase
- Acetolactate synthase catalytic subunit, mitochondrial
- 2-isopropylmalate synthase 2, mitochondrial
- Branched-chain-amino-acid aminotransferase, mitochondrial
- 3-isopropylmalate dehydratase
- Acetolactate synthase small subunit, mitochondrial
- Threonine dehydratase, mitochondrial
- 3-methyl-2-oxobutanoate hydroxymethyltransferase
Sequence:
MGLLTKVATSRQFSTTRCVAKKLNKYSYIITEPKGQGASQAMLYATGFKKEDFKKPQVGVGSCWWSGNPCNMHLLDLNNRCSQSIEKAGLKAMQFNTIGVSDGISMGTKGMRYSLQSREIIADSFETIMMAQHYDANIAIPSCDKNMPGVMMAMGRHNRPSIMVYGGTILPGHPTCGSSKISKNIDIVSAFQSYGEYISKQFTEEEREDVVEHACPGPGSCGGMYTANTMASAAEVLGLTIPNSSSFPAVSKEKLAECDNIGEYIKKTMELGILPRDILTKEAFENAITYVVATGGSTNAVLHLVAVAHSAGVKLSPDDFQRISDTTPLIGDFKPSGKYVMADLINVGGTQSVIKYLYENNMLHGNTMTVTGDTLAERAKKAPSLPEGQEIIKPLSHPIKANGHLQILYGSLAPGGAVGKITGKEGTYFKGRARVFEEEGAFIEALERGEIKKGEKTVVVIRYEGPRGAPGMPEMLKPSSALMGYGLGKDVALLTDGRFSGGSHGFLIGHIVPEAAEGGPIGLVRDGDEIIIDADNNKIDLLVSDKEMAQRKQSWVAPPPRYTRGTLSKYAKLVSNASNGCVLDA
Protein: ADP-ribosylation factor GTPase activating protein 3, isoform H (A8JNX0)
Organism: Drosophila melanogaster (Fruit fly)
Interaction partners:
- Coatomer subunit gamma
- Coatomer subunit beta'
- Coatomer subunit beta
- Coatomer subunit alpha
- Coatomer subunit delta
- ADP-ribosylation factor GTPase-activating protein 1
- Coatomer subunit zeta
- ADP-ribosylation factor 1
- BET1 homolog
- Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1
Sequence:
MASPAAGPSKQEIESVFSRLRAQPANKSCFDCAAKAPTWSSVTYGIFICIDCSAVHRNLGVHLTFVRSTNLDTNWTWLQLRQMQLGGNANAAQFFRAHNCSTTDAQVKYNSRAAQLYRDKLCAQAQQAMKTHGTKLHLEQTDKSEGNEAAREEDFFAQCDNEVDFNVQNNNVSKQDPNPPTVAPVISVETQQGGAPSVNLLNSVVPAAVPSSIGARKVQPKKGGLGARKVGGLGATKVKTNFADIEARANAANEMKTSAAAAPVVKPQTAEDELETVASMRLAYQELSMQKTREEAKLKTMDPAKAKQMERLGMGFNLRGSDMAHSALGDMETIQQSAAPKAKLSLLESENFFTDFSLYGNSSSGGGGGGSSEKRESSVGGTSKLDKFELDALGYETIEPIGGSHSNITSMFSRSNDYDKPKTSAPVKKNSGSSQTHTKGGTSTDPVIAQQKFGNSKGFGSDQYFASEQSSADVSASLNRFQGSRAISSSDYFGDGSPGGTGGNRASSVNFSAPDLDVESVKESVRQGVHKVAGRLSNLANDVMTSWQDKYGY
Protein: DNA-directed RNA polymerase (EC 2.7.7.6) (Plastid-encoded RNA polymerase subunit alpha) (Q2LIP8)
Organism: Oryza sativa (Rice)
Subcellular location: Plastid, chloroplast {ECO:0000256|ARBA:ARBA00004229}.
Interaction partners:
Sequence:
RVDSKRLYYGRFILSPLRKGQADTVGIALRRALLGETEGTCITHAKFGSVPHEYSTIAGIEESVQEILLNLKEIVLRSNLYGVRTASICVKGPRYITAQDIILPPSVEIVDTAQPIANLTEPTDFRIELRIKRDRGYHTEVRKNTQDGSYPIDAVSMPVRNVNYSIFACGNGNAKYEILFLEIWTNGSLTPKEALYEASRNLIDLFLPFLHTEEEGTRFQENKNRFTSPLLSFQKRLTNLKKNKKRIPLNCIFIDQLELPSRTYNCLKRANIHTLLDLLSKTEEDLMRIDSFRMQDGKQIWDTLEKHLPMDLPKNKF
Protein: Formate dehydrogenase, nitrate-inducible, iron-sulfur subunit (Anaerobic formate dehydrogenase iron-sulfur subunit) (Formate dehydrogenase-N subunit beta) (FDH-N subunit beta) (P0AAJ3)
Organism: Escherichia coli (strain K12)
Function: Formate dehydrogenase allows E.coli to use formate as major electron donor during anaerobic respiration, when nitrate is used as electron acceptor. The beta subunit FdnH is an electron transfer unit containing 4 iron-sulfur clusters; it serves as a conduit for electrons that are transferred from the formate oxidation site in the alpha subunit (FdnG) to the menaquinone associated with the gamma subunit (FdnI) of formate dehydrogenase-N. Formate dehydrogenase-N is part of a system that generates proton motive force, together with the dissimilatory nitrate reductase (Nar).
Subcellular location: Cell inner membrane {ECO:0000269|PubMed:11884747}; Single-pass membrane protein {ECO:0000269|PubMed:11884747}.
Interaction partners:
- Formate dehydrogenase, nitrate-inducible, cytochrome b556
- Formate dehydrogenase, nitrate-inducible, major subunit
- Formate dehydrogenase, cytochrome b556
- Formate dehydrogenase-O major subunit
- Protein FdhE
- Formate dehydrogenase-O iron-sulfur subunit
- Probable Ni/Fe-hydrogenase 2 b-type cytochrome subunit
- Formate dehydrogenase H
- Trimethylamine-N-oxide reductase 1
- Formate hydrogenlyase subunit 2
Sequence:
MAMETQDIIKRSATNSITPPSQVRDYKAEVAKLIDVSTCIGCKACQVACSEWNDIRDEVGHCVGVYDNPADLSAKSWTVMRFSETEQNGKLEWLIRKDGCMHCEDPGCLKACPSAGAIIQYANGIVDFQSENCIGCGYCIAGCPFNIPRLNKEDNRVYKCTLCVDRVSVGQEPACVKTCPTGAIHFGTKKEMLELAEQRVAKLKARGYEHAGVYNPEGVGGTHVMYVLHHADQPELYHGLPKDPKIDTSVSLWKGALKPLAAAGFIATFAGLIFHYIGIGPNKEVDDDEEDHHE
Protein: SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 (cDNA FLJ55202, highly similar to SWI/SNF-related matrix-associatedactin-dependent regulator of chromatin subfamily E member 1) (B4DGM3)
Organism: Homo sapiens (Human)
Interaction partners:
Sequence:
MPSTPGFVGYNPYSHLAYNNYRLGGNPGTNSRVTASSGITIPKPPKPPDKPLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIEYNESMKAYHNSPAYLAYINAKSRAEAALEEESRQRQSRMEKGEPYMSIQPAEDPDDYDDGFSMKHTATARFQRNHRLISEILSESVVPDVRSVVTTARMQVLKRQVQSLMVHQRKLEAELLQIEERHQEKKRKFLESTDSFNNELKRLCGLKVEVDMEKIAAEIAQAEEQARKRQEEREKEAAEQAERSQSSIVPEEEQAANKGEEKKDDENIPMETEETHLEETTESQQNGEEGTSTPEDKESGQEGVDSMAEEGTSDSNTGSESNSATVEEPPTDPIPEDEKKE
Protein: Sexual stage-specific protein G37 (A0A509AET3)
Organism: Plasmodium berghei (strain Anka)
Function: Involved in the development of male gametocytes.
Subcellular location: Cell membrane {ECO:0000269|PubMed:29866905}; Multi-pass membrane protein {ECO:0000255}. Note=In exflagellating male gametes, mostly localizes to the residual body. {ECO:0000269|PubMed:29866905}.
Interaction partners:
Sequence:
MKLYLVTFLFFVIYKNKTFVDCVTKKQDVYLDDEFKSFTFFFASSPSANFLSRIVHSNEAKFTQIKNKTDIWNKTIDKAYSINQVSNNIMRVYISLLSLFLFPYFSYIGIFGHSRNKANLTLSSLLAYFALLVSFFLFNGILNIGFVTSLPLVVAVLIFILGVSDCEINFLYKYTRYIFCFIISKLIYDVVTYISKDGANIFDYGFSGHIYMNLLRGKYYIVLKLIHLIILSLISLIIIKICPKIFSNNHLKSPISITFDKYIISFLCSLPIATAISQVFYLLSKTINPIDPSIFFMIPSSINFSSTGTIFSLSIWILMSYLMTFLRNKVEADFNNILNKIPNNLPDFI
Protein: Galectin (Q18625)
Organism: Caenorhabditis elegans
Interaction partners:
Sequence:
MSSHENDTPLPVPYTSRLGQPLDAGQTLNVHGKINEGAQVAEINLLQGGGEIGPNTQVILHLKLNFKEKKVILNSYENGVWGKEERESLPFQAGQEFDLRIRVLDEGLEISADNKKIHEFKHRLPFQSIEYLSVRGDLSLNGIHWGGRFYKLPWETAFPAGFLEKGQRVHLYGIPKGDRWSLDLVARNQDILFHFNPRIKDKAVVRNSHRNGFWDTEEREGGFPFKKDVGFDLTIVNEEYSIQIFINRERFGTFQHRTQNPIGDYIGLRIDGEVEVTGIEFSH
Protein: ADIPOR-like receptor IZH3 (Implicated in zinc homeostasis protein 3) (Q07959)
Organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Function: ADIPOR-like receptor involved in zinc metabolism either by altering membrane sterol content or by directly altering cellular zinc levels.
Subcellular location: Endoplasmic reticulum membrane {ECO:0000305}; Multi-pass membrane protein {ECO:0000305}.
Interaction partners:
- ADIPOR-like receptor IZH4
- Zinc-responsive transcriptional regulator ZAP1
- GTP cyclohydrolase 1
Sequence:
MMDSSSKSLTQYIPSPMGSLSRLKQKGVDNFQKVKKSGKSIYNYNYSKFVPHPFSTIDESVKHSESGRYDDLEIIRPTKEKEVTSSVYKRNSGKSLNTESQFSLGDSDAATLVNSVATFKLNNASTSTSLVSSSSTVCSQAKSSLRSPTSRLNDTKIKEENNYISSVKDYCGPMRKSMVKTEILIEEPLNPTTDIKSFINSYNHGKAYSLGETQHLHYYQLPFPWRENRYIIHGYRFYNTHSKSLLSIFNWYGWHNETSNIWSHLLGAIYIIYLAIYDFPQSEVWRNSQVPPQARWIVFMFLAAALKCMLSSVFWHTFNGTSFLKLRSKFACVDYSGITILITASILTTEFVTMYSCYWAMYTYMSISLALGVFGVFMNWSPRFDRPEARPLRIRFFILLATMGVLSFLHLIFLTDLHYAATLFSPVTYKSVVWYLVGVVFYGSFIPERFRSDVQVDKTIPTNYELSTDLEIITKQREIHFREVPTAHSKCSSCPSHAKSFKSLWWVDYFGCSHTFWHFFVVLGVIGHYRAILDMFAKRWILS
Protein: Patatin family protein (Q54GD5)
Organism: Dictyostelium discoideum (Social amoeba)
Interaction partners:
Sequence:
MTDKPIRIVTVIDGGGTRGYYTVWLLEKLFQEVGCDLINESSLVGGTSTGGIIAISKAVGKLNNEALSNLYVGEDAKKIFVSSYLENIKNIYLRAEAYDSSKLEELARTTLIGNSGPIENNQKFFVTACSPKKEGNEDELIVDIISNYKPVDNDNKQLIIDSQRFIVGSGDDKNQLSVIEAIRATSDIPGAFKLITKDDVTFYDGGFLYNNPILIAYGEARNQFPNDRIIILSFGTGGIVDADGITNDQLKEMNRQSNSQLEQILTPIDEATSTALESNLQFVGPIQGIKNGIEFKKMIDLSKRLALKSPSTHTLFENFMNFRRNSEFSDDDLFVFRFESKLEKHVEFTDTSKEGFTTLMNGALDLANSKHFKKTAELLRKVIIKNNGGKEPSYTPETIALPK
Protein: Ran-specific GTPase-activating protein homolog (Ran-binding protein 1) (RanBP1) (Q54KD9)
Organism: Dictyostelium discoideum (Social amoeba)
Interaction partners:
- Nuclear pore protein
- Uncharacterized protein
- Peptidyl-prolyl cis-trans isomerase A
- Peptidyl-prolyl cis-trans isomerase B
- Peptidyl-prolyl cis-trans isomerase D, mitochondrial
- Peptidyl-prolyl cis-trans isomerase
- peptidylprolyl isomerase
- GTP-binding nuclear protein Ran
- GTP-binding nuclear protein Ran
- Nuclear pore protein
Sequence:
MSEVEKKEEETTTTTTVEKTEEKKEETSSFAPAAEIKEYAADVEPNVEYEATLKRDVVEVKTNEENEDTLFEIRAKLYRFDTDPSPQWKERGTGNVRFLEDKDSKRIRVVMRRDKTLKVCLNHHISPALSLGEMTGSDKSWVWKCPKDFSDEEKPEGVEELFAIRFATPENAGLFKTEFQKCQAKNEAIEKKTE
Protein: Transducin beta-like protein 3 (WD repeat-containing protein SAZD) (Q12788)
Organism: Homo sapiens (Human)
Subcellular location: Nucleus, nucleolus {ECO:0000269|PubMed:12429849, ECO:0000269|PubMed:34516797}.
Interaction partners:
- U3 small nucleolar ribonucleoprotein protein MPP10
- WD repeat-containing protein 43
- Nucleolar protein 6
- U3 small nucleolar RNA-associated protein 18 homolog
- WD repeat-containing protein 3
- RNA cytidine acetyltransferase
- U3 small nucleolar ribonucleoprotein protein IMP4
- Periodic tryptophan protein 2 homolog
- Ribosomal RNA-processing protein 7 homolog A
- U3 small nucleolar RNA-interacting protein 2
Sequence:
MAETAAGVGRFKTNYAVERKIEPFYKGGKAQLDQTGQHLFCVCGTRVNILEVASGAVLRSLEQEDQEDITAFDLSPDNEVLVTASRALLLAQWAWQEGSVTRLWKAIHTAPVATMAFDPTSTLLATGGCDGAVRVWDIVRHYGTHHFRGSPGVVHLVAFHPDPTRLLLFSSATDAAIRVWSLQDRSCLAVLTAHYSAVTSLAFSADGHTMLSSGRDKICIIWDLQSCQATRTVPVFESVEAAVLLPEEPVSQLGVKSPGLYFLTAGDQGTLRVWEAASGQCVYTQAQPPGPGQELTHCTLAHTAGVVLTATADHNLLLYEARSLRLQKQFAGYSEEVLDVRFLGPEDSHVVVASNSPCLKVFELQTSACQILHGHTDIVLALDVFRKGWLFASCAKDQSVRIWRMNKAGQVMCVAQGSGHTHSVGTVCCSRLKESFLVTGSQDCTVKLWPLPKALLSKNTAPDNGPILLQAQTTQRCHDKDINSVAIAPNDKLLATGSQDRTAKLWALPQCQLLGVFSGHRRGLWCVQFSPMDQVLATASADGTIKLWALQDFSCLKTFEGHDASVLKVAFVSRGTQLLSSGSDGLVKLWTIKNNECVRTLDAHEDKVWGLHCSRLDDHALTGASDSRVILWKDVTEAEQAEEQARQEEQVVRQQELDNLLHEKRYLRALGLAISLDRPHTVLTVIQAIRRDPEACEKLEATMLRLRRDQKEALLRFCVTWNTNSRHCHEAQAVLGVLLRREAPEELLAYEGVRAALEALLPYTERHFQRLSRTLQAAAFLDFLWHNMKLPVPAAAPTPWETHKGALP
Protein: Geranylgeranyl diphosphate (GGPP) synthase (EC 2.5.1.-) (Q5FJG8)
Organism: Lactobacillus acidophilus (strain ATCC 700396 / NCK56 / N2 / NCFM)
Interaction partners:
- Isoprenyl transferase
- diphosphomevalonate decarboxylase
- Exodeoxyribonuclease 7 small subunit
- Exodeoxyribonuclease 7 large subunit
- Isopentenyl-diphosphate delta-isomerase
- Hemolysin-like protein
- Bifunctional protein FolD
- DNA repair protein RecN
- ASCH domain-containing protein
- 1-deoxy-D-xylulose-5-phosphate synthase
Sequence:
MTAFTYFKDEWTPVIDNYLAKHLASEIDDQKISQIMSYSVMAGGKRLRPLLFLATLNALGKKIEESEIRLACGIELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAILAGDALLPLGVQWIAEGSNSSELVIMITKAIGANGMVGGQYLDIDSTNNASVADDEKFINKMEWLKTGCLIQASVEMAAVYAKASDIEQVKLVDFAKTFGRSYQIYDDLVDVVETSEEAGKATHKDEEEGKNNTLTLLGIEKSRKELKDLISQAKADLHGINNEVLLGFLDLYHKVL
Protein: Transcription factor Sox-18A (xSox18alpha) (SRY (sex determining region Y)-box 18A) (Q90ZH8)
Organism: Xenopus laevis (African clawed frog)
Function: Probable transcription factor. Binds to the consensus DNA sequence 5'-AACAAT-3'. Also binds 5'-CACAAT-3' and 5'-AATAAT-3' with similar affinity.
Subcellular location: Nucleus {ECO:0000255|PROSITE-ProRule:PRU00267}.
Interaction partners:
Sequence:
MHRSESSYCREETTLCQGVNSTWVPPADTVPEVSLIPSSPPAPDSPAPSPKPGYGFSTCEEKHGDPRIRRPMNAFMVWAKDERKRLAQQNPDLHNAVLSKMLGQSWKNLTSVEKRPFVEEAERLRVQHLQDHPNYKYRPRRKKQAKKLKRMDPSPLLRNEGFTRGQPMVNLSHFRNLHPLGGSGELESYGLPTPEMSPLDVLEPSEPAFFPPHMREDTDPVPFRTYQHGMDFSQEKTMREISLPYSSSPSHMGSFLRTPTPSAFYYKAHGGSPVCTPLGQLSPPPEAPALDAMDHLNQAELWGDFDRNEFDQYLNMSRTQRPGYSFPMSKLGAPRTIPCEENSLISALSDASTAMYYTPCITG
Protein: Emb|CAB16785.1 (Pyridoxal phosphate (PLP)-dependent transferases superfamily protein) (Q9FGD5)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Interaction partners:
- Iron-sulfur cluster assembly protein 3
- Iron-sulfur cluster assembly protein 2
- Iron-sulfur cluster assembly protein 1
- SufE-like protein 2, chloroplastic
- Iron-sulfur cluster assembly SufBD family protein ABCI9
- Iron-sulfur cluster assembly SufBD family protein ABCI8, chloroplastic
- Protein ABCI7, chloroplastic
Sequence:
MHISLWKPIYHCAAALVLDKKSSGSSSSSSRNRDVTQRKLHESKLREALEQASEDGLLVKSQDMEEEDESQDQILGRSRSLARLNAQREFLRATSLAAQRAFESEETLPELEEALTIFLTMYPKYQSSEKVDELRNDEYFHLSLPKVCLDYCGFGLFSYLQTVHYWDTCTFSLSEISANLSNHAIYGGAEKGSIEHDIKIRIMDYLNIPENEYGLVFTVSRGSAFKLLAESYPFHTNKKLLTMFDHESQSVSWMGQCAKEKGAKVGSAWFKWPTLRLCSMDLKKEILSKKKRKKDSATGLFVFPVQSRVTGSKYSYQWMALAQQNNWHVLLDAGALGPKDMDSLGLSLFRPDFIITSFYRVFGYDPTGFGCLLIKKSVISCLQSQSGKTSSGIVKITPEYPLYLSDSMDGLEGLTGIQDNGIAINGDNKALGTQLPAFSGAYTSAQVQDVFETDMDHEIGSDRDNTSAVFEEAESISVGELIKSPVFSEDESSDSSLWIDLGQSPADSDNAGHLNKQKSPLLVRKNHKRRSSPKPASKANNGSNGGRHVLSFDAAVLSVSHEVGEEVIEEENSEMNQIDTSRRLRVTEIEEEEEEGGSSKLTAHANGSSSGIKDSAIRRETEGEFRLLGRREKSQYNGGRLLVNEDEHPSKRRVSFRSVDHGEASVISLGDEDEEEDGSNGVEWDDDQREPEIVCRHIDHVNMLGLNKTTSRLRYLINWLVTSLLQLRLPRSDSDGEHKNLVQIYGPKIKYERGSSVAFNIRDLKSGMVHPEIVQKLAEREGISLGIGYLSHIKIIDNRSEDSSSWKPVDREGRNNGFIRVEVVTASLGFLTNFEDVYRLWNFVAKFLSPGFAKQGTLPTVIEEDDSSET
Protein: Constitutive coactivator of PPAR-gamma-like protein 1 (Oxidative stress-associated SRC activator) (Protein FAM120A) (Q9NZB2)
Organism: Homo sapiens (Human)
Function: May participate in mRNA transport in the cytoplasm (By similarity). Critical component of the oxidative stress-induced survival signaling. Activates src family kinases and acts as a scaffolding protein enabling src family kinases to phosphorylate and activate PI3-kinase. Binds RNA and promotes the secretion of IGF-II. May play a pivotal role in the progression of scirrhous-type gastric cancer by supporting cancer cell survival in environments with various oxidative stresses.
Subcellular location: Cytoplasm {ECO:0000269|PubMed:19015244}. Cell membrane {ECO:0000269|PubMed:19015244}; Peripheral membrane protein {ECO:0000305|PubMed:19015244}; Cytoplasmic side {ECO:0000305|PubMed:19015244}. Note=Translocates from the cytosol to plasma membrane after UV irradiation. {ECO:0000269|PubMed:19015244}.
Interaction partners:
- Insulin-like growth factor 2 mRNA-binding protein 2
- Heterogeneous nuclear ribonucleoprotein Q
- Regulator of nonsense transcripts 1
- Heterogeneous nuclear ribonucleoprotein A1
Sequence:
MGVQGFQDYIEKHCPSAVVPVELQKLARGSLVGGGRQRPPQTPLRLLVDADNCLHRLYGGFYTDWVSGGQWNHMLGYLAALAKACFGGNIELFVFFNGALEKARLHEWVKRQGNERQTAQQIVSHVQNKGTPPPKVWFLPPVCMAHCIRLALIRFHVKVAQSIEDHHQEVIGFCRENGFHGLVAYDSDYALCNIPYYFSAHALKLSRNGKSLTTSQYLMHEVAKQLDLNPNRFPIFAALLGNHILPDEDLASFHWSLLGPEHPLASLKVRAHQLVLPPCDVVIKAVADYVRNIQDTSDLDAIAKDVFQHSQSRTDDKVIRFKRAIGYYSATSKPMSFHPPHYLAARPGPFGMPGMVPPHVPPQMLNIPQTSLQAKPVAPQVPSPGGAPGQGPYPYSLSEPAPLTLDTSGKNLTEQNSYSNIPHEGKHTPLYERSSPINPAQSGSPNHVDSAYFPGSSTSSSSDNDEGSGGATNHISGNKIGWEKTGSHSEPQARGDPGDQTKAEGSSTASSGSQLAEGKGSQMGTVQPIPCLLSMPTRNHMDITTPPLPPVAPEVLRVAEHRHKKGLMYPYIFHVLTKGEIKIAVSIEDEANKDLPPAALLYRPVRQYVYGVLFSLAESRKKTERLAFRKNRLPPEFSPVIIKEWAAYKGKSPQTPELVEALAFREWTCPNLKRLWLGKAVEDKNRRMRAFLACMRSDTPAMLNPANVPTHLMVLCCVLRYMVQWPGARILRRQELDAFLAQALSPKLYEPDQLQELKIENLDPRGIQLSALFMSGVDMALFANDACGQPIPWEHCCPWMYFDGKLFQSKLLKASREKTPLIDLCDGQADQAAKVEKMRQSVLEGLSFSRQSHTLPFPPPPALPFYPASAYPRHFGPVPPSQGRGRGFAGVCGFGGPYGETVATGPYRAFRVAAASGHCGAFSGSDSSRTSKSQGGVQPIPSQGGKLEIAGTVVGHWAGSRRGRGGRGPFPLQVVSVGGPARGRPRGVISTPVIRTFGRGGRYYGRGYKNQAAIQGRPPYAASAEEVAKELKSKSGESKSSAMSSDGSLAENGVMAEEKPAPQMNGSTGDARAPSHSESALNNDSKTCNTNPHLNALSTDSACRREAALEAAVLNKEE
Protein: Invariant surface glycoprotein, putative (Q57VX5)
Organism: Trypanosoma brucei brucei (strain 927/4 GUTat10.1)
Interaction partners:
Sequence:
MMPVTLRITATVFLLCGICALDVTWAEELVWWKSYVTSGGKKVDGEGARSICVIKAIVDLVSERAFFLESEALSQLSKAKTVLSNVTISDNIRTSLTKKKQEEILMTRELVEAVRKHIEAAYKRTKEAALDASRLLSDILKWHCIDVEKMRGSPYNYSTGANCDPDAFSRERFHYYHVNDRRNNSILCDYKVIRSGDTVASFETMGRALDKWNFVKPKPNLTRLSECWNGQWRDEATETLVPCMLRESWLEDYNASRYSMRRLYDLTHVAVRIRKYAEMLSLGEGTSAEGVHEEDKAANERAVEERSKHQAAGRVVNEARNVFEDVEKRWLLLKRDAEARSRDADAVREAESKLREVTTKIEELSKALEEAKANKEKLEAAALLMAGESRKKIQAEKDAKSRLREVEKEAEISKKALEGAETEMMKADDAAIIAQWEAEDTLRSCADLKKEVYQSLARVSKYDKGDEVFDAHQRDNHRITRLLVRFIILLLLLGSFLFFVIRGRREMQLYHNIHNDGLFSEERAVKDTPAIDAFVELPRITPTVKHEKEQSI
Protein: Myogenic factor 5 (Myf-5) (Q08856)
Organism: Gallus gallus (Chicken)
Function: Acts as a transcriptional activator that promotes transcription of muscle-specific target genes and plays a role in muscle differentiation. Induces fibroblasts to differentiate into myoblasts. Probable sequence specific DNA-binding protein (By similarity).
Subcellular location: Nucleus.
Interaction partners:
- PAX7 protein
- Paired box 3
- Growth/differentiation factor 8
- Myocyte enhancer factor 2D
- Myocyte enhancer factor 2B
- Myogenic factor 6
- Transcription factor 12
- Myocyte enhancer factor 2C.
- Insulin gene enhancer protein ISL-1
- Myosin-1B
Sequence:
MEVMDSCQFSPSELFYDSSCLSSPEGEFPEDFEPRELPPFGAPAPTEPACPEEEEHVRAPSGHHQAGHCLMWACKACKRKSTTMDRRKAATMRERRRLKKVNQAFETLKRCTTANPNQRLPKVEILRNAIRYIESLQELLREQVENYYHLPGQSCSEPTSPSSSCSDVMADSRSPVWPARGSSFEAGYCREMPHGYATEQSGALSSLDCLSSIVDRLSPAEEPGLPLRHAGSLSPGASIDSGPGTPGSPPPRRTYQAL
Protein: E3 SUMO-protein ligase NSE2 (E3 SUMO-protein transferase NSE2) (Non-structural maintenance of chromosomes element 2 homolog) (Q8I8H9)
Organism: Drosophila melanogaster (Fruit fly)
Subcellular location: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
Interaction partners:
Sequence:
MSDFVSDFSDGGKIKKLLEQSVEQSVEHAVNVVHMKIKHQSLNKAMNQVKNSSATIEEFEEVWKERSKAVEQKRINVKNLDEFKNFVKAVESAAGQAGAEVNDQANGTAYDEDLIMEDSGSEVFSFYDPWSKALIKNPMRNKMCGHIYDRDSVMPIIMDRIGIRCPVLGCANLCYIQPDHLVQDANVQQKIQQSMSNAIVDVTASEEDEE
Protein: Alpha/beta-Hydrolases superfamily protein (Q94IU8)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Interaction partners:
Sequence:
MSLSLPSSSAAAAAASTSGSSSSPAAASSSSTTTSWFSGIVRGRGDKSGTAKLSKSSSMAGGGSGSGDYGGPIKGKNQFRGVLFKYGPKSIQVAFKTGEYKQQVIFIGGLTDGLLATDYLEPLAIALDKEKWSLVQLLMSSSYSGFGTSSLKQDAQEIDQLINHLINKENSEGVVLLGHSTGCQDIVYYMGTNAACSRAVRAAILQAPVSDREYKATLPETPAMIDLAANMIKEGRGEELMPREADPCAPISAYRYHSLCAYMGDDDMFSSDLSDDQLKTRLGHMANTPCQVIFSMGDEYVPDYVDKKALVNRLSKAMGGAEKVEIEHGNHSLSNRVHEAVQAIIGFVKREGPSGWDDPWS