wanglab/gogpt-training-data huggingface dataset:
Protein: Pleckstrin homology domain-containing family G member 7 (PH domain-containing family G member 7) (Q6ZR37)
Organism: Homo sapiens (Human)
Interaction partners:
Sequence:
MEKTESFCPEVPPQDCGASPRPSLRSLPKNQGSLLQFDRQAPGRISTSPTLRRLRTRGCGTRQDAWQVTTWGSWGAPVGFPCYLSKSLPGSPKDSSHLLSPLRLHSRLTSEPERALNAADSLEPQTRPTDKYLPPELQPVNEGSLHQASLRQQEGHFLPSPTLRHPSPQGEELHPSRFYEHRRSSVVLNLPGLEVFPGDLLVSDGAADYLCHPLLLLNSESKKPRWPFSKRGVGKDKHKHISDLENCLSSVKITSFRGYDFYGLKDKTWDEVLETHHKLPTDQLDLKKQQEAVWELFTSECTYFLDHLLVLKMIFMNTLRYLQTHEYLLDVDLWRLFANLEELTQTSLGFVNSLFGIIKDYVDASEISSSLDFISVLTKYFRGSLCQSHQTYCLNYSAAIFYLESLRQRDDFGIYLKWCEQNEQCRRLHVPELLVAPLQRLTRYPLLLKNIWKRSMDSAEKIMIYSIKEKVEKSIRDLEGKVKWLDNFQKFRYLQEIIVWPPLWDRDKRFFIPECLKHIFKEHMAENILSPTSRHLLYEGKLTLAESTRFLDVYLFLFNDFLLVTKTKCNKKKLGGSDPGLMCPSLTPELQAVIKEGGSCTVLDQPIPLDRLVVKSIEPLHVSVFGLRNAFLIQHENRYRQCIAAFLLQAQTENIKKTWMAQITTAISCFTKSQETKKISLFTLPAESSEI
Protein: Ubiquitin-conjugating enzyme E2 2 (EC 2.3.2.23) (E2 ubiquitin-conjugating enzyme 2) (Radiation sensitivity protein 6) (Ubiquitin carrier protein UBC2) (Ubiquitin-protein ligase UBC2) (O74201)
Organism: Candida albicans (strain SC5314 / ATCC MYA-2876) (Yeast)
Function: Catalyzes the covalent attachment of ubiquitin to other proteins. Plays a role in transcription regulation by catalyzing the monoubiquitination of histone H2B to form H2BK123ub1. H2BK123ub1 gives a specific tag for epigenetic transcriptional activation and is also a prerequisite for H3K4me and H3K79me formation. Also involved in postreplication repair of UV-damaged DNA, in N-end rule-dependent protein degradation and in sporulation.
Subcellular location: Cytoplasm {ECO:0000250|UniProtKB:Q5VVX9}. Nucleus {ECO:0000250|UniProtKB:Q5VVX9}.
Interaction partners:
- Postreplication repair E3 ubiquitin-protein ligase RAD18
- E3 ubiquitin-protein ligase BRE1
- Ubiquitin-activating enzyme E1 1
- Nucleoporin NSP1
- E3 ubiquitin-protein ligase
- Polyubiquitin
- Ubiquitin-ribosomal protein eS31 fusion protein
- E2 ubiquitin-conjugating protein
- HECT-type E3 ubiquitin transferase
- DNA polymerase
Sequence:
MSTPARRRLMRDFKRMQQDPPSGVSASPLPDNVMKWNAVIIGPSDTPFEDGTFRLLLSFDEQYPNKPPQVKFISEMFHPNVYASGELCLDILQNRWSPTYDVSSILTSVQSLLNDPNISSPANVEAANLYKDHRSLYVKRVRETVENSWNDDDDEEEEEEDEDEAEDEDDDDDDNIDED
Protein: Pcf11 cleavage and polyadenylation factor subunit, isoform F (A0A0B4LF47)
Organism: Drosophila melanogaster (Fruit fly)
Interaction partners:
Sequence:
MEQLFQNYRDDERRIGEEYLSSLQDLNCNSKPLINMLTMLAEENINYAHIIVKVVEYYISQVAPEFKLPILYLIDSIVKNVKSSYVQLFGQCIVNIFLHAFESVQHSQSQVLEKVRERMYALRQTWNEVFPPSKMYALDVKVKRLDNNWPITAKQPTNKIHVNPAIHVNPDFLKPGLVPGMPGNPTITSDMEEILQAKTRELLELKKRKLELELEQTKKHLEEQERQLTQTTDAMVGAPIIMPAPTPAAICPPITDPGIAVHNQRAPGVMGNVGPVMHNMPVAPQLFANKPKVHPVNPALLNSVRQRDPRLARQMHAASSHPAAPARNDPRLEAKSSSSQKSSRSRSKSPVRNSSSRSGKSGSSSHSSSSSRKRSESKSSTTSSSSSSSDVRHKGVTASSSNQPTVKRSGKITSKDSDRYVRNGSPLGSAKRKSSSPSSSPSKSKRSTSHKSSSSRGKTSSLRSRSRSPVFMDVDLRTGVRSKSPESRAVAPSSLPLAGASLPASAKAPKDLEKLSMLNSNPTTSGTPAASLVRQSSPSPSSSSISSQGNVSDALQLSINKLLQVQGGAGEKRPADALPPHIDGEEQPPQQKRSKSAKLDALFGSEDVDLRREILVVKPGVIVVEDDSMDECDVDKPTKKSGSPPKKATLEELRAKLANSARIQNKQGKSDKSRDQAVSQRLKQLAELKVNDDSQEAHDEKVRTILSQAQEMYENNGMNQEQYKDLVQKVVAINENSKIKESRRRDNDLERNAARDAVLRKRIPKLKGNENHSAGSPHTDGSPRYDDQPAAAPEKPSNKRDKTKREMKRRKPTKWGEQVDAGAAQRTAWQLANVNNNNNNNNNKRGGIQLPVQPQAGFRGMPWQQPPAMVLGQSAVPPPPQPPSMISMPPVPPVTMTKAINSLDNPMADVVRSITIDGGSKEIRFYNQVAIIFMDGDQPHEIGFQPGQRVIFIDHNEPLPLCFNDDYKPFHLDGQLHRIRFGFPSRELYIDEHWYEIYFGGPAVSVPIGNKLHIIKAEGPPPNVDIGRVRRDLVVGKINMIADAHTIVPLFLDARQQTFQLGAEQHSLQFVDSFQYALLDGQLQKMEYGGLPKGMMLNGGRSCFIRFGTLPKGVIAGKTHVADMVYIKTDAPAEPPKPPPIIVKPPPVVEQPKPAPVAVAPISLPAAAAALESLNINDLFQKLVSSGIIGGATAAPTLPAADSSAAKEPTASATEPSTASATVAPATLPAGPPAEPIKRIDLRKPESIKTRQAAVVAVLYLGMQCSSCGVRFPPEQTIKYSQHLDWHFRQNRRERDSTRKATSRKWYYDLNDWRQYEEIEDVEEREKNFLEAQGQPGGVEALDELSQQRSLDSPVPTCAAGRDDVDHCCDMCHEKFEQFYNEELEEWHLRSAIRVEDKIYHPLCYEDYKASLNPPTEVKSDQDVDMNNTDDNAMDTLIKVEDDEDEGTPNSSQPIFEDDDDDVIVLPNEEPSVTEIVDDDDEDEYVPGNVTRADMGNESQDKTESNSETKEPKKDQVELGEQQQNESANESDVEIQEPNIPFTDLDTYVEKEMDEATRAALLNVKIKEEPKDEYEEDEDDGFEDVGTVVSLLPLPEDEISIHSSETQTHTIGSSASPATIERPASVTSLSLPANEADELEQGDANTDTDAELNGEKQEATHNLSAVGPALPLASIVNKIKINITKNTSSNSHNSASNTTTTDSQVSAISVIGGSGAAGGASGAGDPVQQVNAIQTISTIPVLCGGNTFVPKIATSTPSNVISSISVIGSTYGASSSSNGSRSTTSTASSAPAASLLAETGSLKSPTPPLATVDPDPEPVVEQKPALRNATLKRTKKVQNGIETSGLCSIM
Protein: Uncharacterized protein C18G6.12c (Q10111)
Organism: Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Interaction partners:
- Acetyl-CoA acetyltransferase
- Secretory component protein psh3
- Large ribosomal subunit protein bL33m
- Small ribosomal subunit protein uS9m
- Large ribosomal subunit protein mL43
- Small ribosomal subunit protein mS29
- Small ribosomal subunit protein bS16m
- Probable acetyl-coenzyme A synthetase
- Large ribosomal subunit protein mL49
- Large ribosomal subunit protein bL36m
Sequence:
MAFSFQVSKMNSFDNYNAAIHPKHDLISVNAPVFGKDAKLSPHLAIVLADKGFMLEQVCLPWRYFTDRGFVVEFVIAESIFPPRPPKPNDSYMTGWKSHVLGASKEILDIYSVLCTLNEFNNPKCYRSNGFTFDNFSAVFITGGRNPFVREMLEDPLLHASLVPYIHSCRTIQPDEEVKDNRKIKVLGAISQGAAAIYLAEPNINMKTTTIPAWMERSNSFLNPTPDNSTYPYAATIIPKDKYVSGPYRRVAFTYQDENYYYISGRSNKDIGELSKKMYLMYKQAYKDLNASLRERRRRSTSNRRNSGI
Protein: General negative regulator of transcription subunit 4 (EC 2.3.2.27) (Modulator of transcription 2) (P34909)
Organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Function: Acts as component of the CCR4-NOT core complex, which in the nucleus seems to be a general transcription factor, and in the cytoplasm the major mRNA deadenylase involved in mRNA turnover. The NOT protein subcomplex negatively regulates the basal and activated transcription of many genes. Preferentially affects TC-type TATA element-dependent transcription. Could directly or indirectly inhibit component(s) of the general transcription machinery.
Subcellular location: Cytoplasm {ECO:0000305}. Nucleus.
Interaction partners:
- CCR4-Not complex 3'-5'-exoribonuclease subunit Ccr4
- General negative regulator of transcription subunit 1
- General negative regulator of transcription subunit 5
- General negative regulator of transcription subunit 2
- Poly
- Protein CAF130
- General negative regulator of transcription subunit 3
- Protein CAF40
- ATP-dependent RNA helicase DHH1
- Ubiquitin-conjugating enzyme E2 4
Sequence:
MMNPHVQENLQAIHNALSNFDTSFLSEDEEDYCPLCIEPMDITDKNFFPCPCGYQICQFCYNNIRQNPELNGRCPACRRKYDDENVRYVTLSPEELKMERAKLARKEKERKHREKERKENEYTNRKHLSGTRVIQKNLVYVVGINPPVPYEEVAPTLKSEKYFGQYGKINKIVVNRKTPHSNNTTSEHYHHHSPGYGVYITFGSKDDAARCIAQVDGTYMDGRLIKAAYGTTKYCSSYLRGLPCPNPNCMFLHEPGEEADSFNKRELHNKQQAQQQSGGTAFTRSGIHNNISTSTAGSNTNLLSENFTGTPSPAAMRAQLHHDSHTNAGTPVLTPAPVPAGSNPWGVTQSATPVTSINLSKNSSSINLPTLNDSLGHHTTPTTENTITSTTTTTNTNATSHSHGSKKKQSLAAEEYKDPYDALGNAVDFLDARLHSLSNYQKRPISIKSNIIDEETYKKYPSLFSWDKIEASKKSDNTLANKLVEILAIKPIDYTASVVQFLQSVNVGVNDNITITDNTKTPTQPIRLQTVSQQIQPPLNVSTPPPGIFGPQHKVPIQQQQMGDTSSRNSSDLLNQLINGRKIIAGN
Protein: RE13542p (Q8MS40)
Organism: Drosophila melanogaster (Fruit fly)
Interaction partners:
Sequence:
MCTPSRAALLTGKYPINTGMQHYVIVNDQPWGLPLNETTMAEIFRENGYRTSLLGKWHLGLSQRNFTPTERGFDRHLGYLGAYVDYYTQSYEQQNKGYNGHDFRDSLKSTHDHVGHYVTDLLTDAAVKEIEDHGSKNSSQPLFLLLNHLAPHAANDDDPMQAPAEEVSRFEYISNKTHRYYAAMVSRLDKSVGSVIDALARQEMLQNSIILFLSDNGGPTQGQHSTTASNYPLRGQKNSPWEGALRSSAAIWSTEFERLGSVWKQQIYIGDLLPTLAAAAGISPDPALHLDGLNLWSALK
Protein: Probable glycosyl transferase (Q9I4V9)
Organism: Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Interaction partners:
- PslA
Sequence:
MWPSCMARFPSDGQPGYRFVPSPGSGAGEEEMRPLVSVVCACFNISKYLDEAIASIYAQGYPNLELIVVDDGSTDDTYERLAMLRERHGFQLYRQANRGVSDALNHGLRHARGEFVMTPDLDDILLPGALDTRVDYLLAHPEVGCVGGFNICIDSAGNEVARDGFSEGCVERWGFDAALAETLVVMPLTALYRMEAMKRADFFDPSIRVQDFQITLRIAAQGYEIHRLPAYMGRYRRHGSGLSGRYKLNYEADMQAIEPYRAHPNYRRARQLILNKALKKAVVQDGRYAWQLFRSVPLRAWDRVTLKRFWRFLRYLPVLGLKGGTGVEGR
Protein: Piercer of microtubule wall 1 protein (Pierce1) (UPF0691 protein C9orf116 homolog) (Q32P67)
Organism: Bos taurus (Bovine)
Function: Microtubule inner protein involved in the attachment of outer dynein arms (ODAs) to dynein-decorated doublet microtubules (DMTs) in cilia axoneme, which is required for motile cilia beating. Functions at the initial step of left-right asymmetry specification of the visceral organs.
Subcellular location: Cytoplasm, cytoskeleton, cilium axoneme {ECO:0000269|PubMed:34715025}. Cytoplasm, cytoskeleton, flagellum axoneme {ECO:0000269|PubMed:37327785}.
Interaction partners:
- Calaxin
- Tektin-1
- Cilia and flagella associated protein 90
- Armadillo repeat containing 3
- Outer dynein arm-docking complex subunit 2
- Tektin-4
- Tektin-3
- Protein Flattop
- Tektin bundle-interacting protein 1
- EF-hand domain-containing family member C2
Sequence:
MSEEDPKACAEPEEPKAGPPPEKTSDWYRVSEDLPARFNNPAWFRGYRTKEPPSVYRTSNQAYGSRAPTVHEMPKVFYPNSYKFSRQVAVGGMFQNNTLNVYMEKSIVTGPDNYITSYDRLNFHPSYRVCRPSICD
Protein: Transcription repressor MYB6 (Myb-related protein 6) (AtMYB6) (Q38851)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Subcellular location: Nucleus {ECO:0000305}.
Interaction partners:
- WRKY transcription factor 1
- Dihydroflavonol 4-reductase
Sequence:
MGRSPCCEKAHTNKGAWTKEEDQRLVDYIRNHGEGCWRSLPKSAGLLRCGKSCRLRWINYLRPDLKRGNFTDDEDQIIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKLLSHGIDPQTHRQINESKTVSSQVVVPIQNDAVEYSFSNLAVKPKTENSSDNGASTSGTTTDEDLRQNGECYYSDNSGHIKLNLDLTLGFGSWSGRIVGVGSSADSKPWCDPVMEARLSLL
Protein: DUF1618 domain-containing protein (Q387E2)
Organism: Trypanosoma brucei brucei (strain 927/4 GUTat10.1)
Interaction partners:
Sequence:
MTNRENTWVHVGESPLFQFRVKNITTISFIRLQCSPRDDVLTPLKDSCITLWAKYSPYVRTADGVLCDLPPYVVASFRFDETGEAVSSALAWVLQEGSAVTICVATDTGVPEVLRDDAAERSAAAPWAASYGLGCNISVSLFGTEKLRDYYLSSWRPLLVYRWFELKDCVREATILPSRYRGPLTPNSTLKFRKRRFLHGGVREAKCISSCGNYVLWADGTMGPAGEVVPYWRRFAPARVDKRVRVRAFPHRFADIVGEVPFGCMVEAIGKKVDPSTREEYVLLVLGVLPNAASLAEAYELTYIETGKWIWGWSKIATRNGMVLLVEVSDTCGATAEGQMWVEHLPEPAFYTSASDDRRVRIRRGPSLHDDVVGHLERNEVKLAVALWHPVDGAICGAIPSEDVNNTNSDHGAGPRGEKVPQSVLHHFVEWESGGFSLLRNNDRVYLVAVELRKEPRHFPVCPRPEPQSPEIISISRKRARAESPVSEASEKAKADAPSSQLWSPSMLPEAVTMGLKSGRVRLEDLPTIESAGGSCGSLSSFEGD
Protein: 3-hydroxyisobutyrate dehydrogenase, mitochondrial (EC 1.1.1.31) (Q9V8M5)
Organism: Drosophila melanogaster (Fruit fly)
Subcellular location: Mitochondrion {ECO:0000250}.
Interaction partners:
- 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial
- Probable methylmalonate-semialdehyde/malonate-semialdehyde dehydrogenase [acylating], mitochondrial
- aldehyde dehydrogenase
- Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex
- Cytokine-like nuclear factor N-PAC
- (S)-3-amino-2-methylpropionate transaminase (GABA aminotransferase) (Gamma-amino-N-butyrate transaminase) (L-AIBAT)
- Alanine--glyoxylate aminotransferase 2, mitochondrial
- Uncharacterized protein, isoform B
- aldehyde dehydrogenase
- Short-chain specific acyl-CoA dehydrogenase, mitochondrial
Sequence:
MSLRVMSPAMLNAWSQTLVRAMSTQGGAKNIGFVGLGNMGANMASNLIKAGHKLHVFDISKPACDGLAAKGATVYAKTSELAKNSDFVITMLPNNAIVDASYDEMTADGVNKDTIFIDSSTISPDLVKSLQKKISAKGARFIDAPVSGGVPGAEQATLTFMVGGTEAEYNAVKAVLECMGKKITHCGVYGMGQAAKLCNNMMLAISMIGVSEAMNLAVRQGLDANVFAEIINSSTGRCWASEIYNPVPGVCPSAPANRDYAGGFSSALITKDLGLASGVANASNSPIPLGSLAHKVYQSLCDKGLGNKDFSVVYDLMKKEKFSV
Protein: HECT-type E3 ubiquitin transferase (EC 2.3.2.26) (Q54QF1)
Organism: Dictyostelium discoideum (Social amoeba)
Interaction partners:
Sequence:
MFNLNIFGISNLINNSNNNKNKNNNNINNNNNNNNNNNNNNNNNNNNSNNNNSNNNNNNSTNTNSSIININSNSNSNNSQMELINNNSLINSSESFLVSKKKENMKSLSNDRIGSGLYSIVSGNGIVGNIGDVGEDFCFQVSSYHKNGVRKKQGGDIISVNIQGCDYQNIEEQIKSRVIDRMNGCHLVYYNVSKSGNYLISVFVNQVPVVGSPFKVFVSPIPYSICIKQKLSSPSSSSSSSSSSSFSSSSSSSSSSSSSSSSTLNNQIIAGNLITCEISPTRVSSHIINDKIDLTIFIKENGVLKKTNVEINSEILNSINSSGSGGGGGDPSSSLSSNSNNRMISDFESMMISKFRLTKSGEYVLEGSTTGVLVFSKIITVIPGPVSSKYSQLIWDGKELISENKLFILKDNQNNDQSNSSPDFKFIIETKDKFGNNNQNSNSINDFKFYLKKSLSPILLNNNNNNNNNNNNNNNNSNINNINNKNNNNNNNNEENEKEKEKQKLELSSDENNNNNKNKNKNKNNTNNCEDYEKDLIEILPNSIYYNNQGNISFTFNGDQQNQVGWYCICVKINDEPISNSPFILAMIKEKDFQSLSNYYTNGKASFNCQVEKNGKLTNISLYLTQNKIEIIENYYFMNIKLYEFIINPTVQILLVNGGELVIQDNNSKVYLKGISMDQSFLILLTSFYFFGYTTQSEPKFDSKVKWLKGKLCKIQKKMITLKLNISSRSQILMESIQVLKQIDPNDLVLSRLFVKFNDEEGIDIGGISKEWFSNFSEELANTPLNGYHLFQEYSNSNKYHPSPFSNLIPDYRSIFKTLGRITGKSIIDSITKADRHFSLRFTPIFYKMILGEKITLDDLELIDPELYNNKVKLILNTPMNQVNEILGEPLCFVCDIYNQNELLKRSLNNNNNNDEDNNKIENNNNNNNSEFKIQIMKTINLKPFGNLIRVTDDNKLEYLELWVNSLFYNGVKTQIEEYREGLFQMIPHSILSIFNWKELEMLICGRERINLDDLKQHSSFTGYFNQTLIDEFWLIVNGFNEDEKKSLIKFVTGSSSVPLGGFYQLCPHFTINLTPPIQNGVNRLPISHTCFNRLDIPINCLSFKNLKLAITEGDGFSLV
Protein: Cell adhesion molecule-related/down-regulated by oncogenes (Cell adhesion-associated, oncogene-regulated) (Q1L8D0)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Interaction partners:
- Protein patched homolog 1
- Protein patched homolog 1
- Sonic hedgehog protein
- Growth arrest-specific 1a.
- Growth arrest-specific 1b
- Low density lipoprotein receptor-related protein 2a.
- Desert hedgehog protein
- Indian hedgehog B protein
- BOC cell adhesion-associated, oncogene-regulated.
- Tiggy-winkle hedgehog protein
Sequence:
MEDGGLRLLSAVLCVCHTLLLNCPTVLSFSFRAEPLSAILKQGSSVHLHCTTHPATARISWLFQGQPLDPSHHSGVELSQDSLSLSNLQPALTGSYQCSARSETGSIISRHARVTIADIEEFAETHRRSFTVNKGDTAVIECPLPRSNPPALPRFRIRGKWLEQSTDEYLILPSGNLQIVSVSSEHQGMYKCGAYNPLTRETRVEAHGTKLLVKDSESSSPVRIVYPITPRSLTVDQSGSLTLECVVSGSLSSKVKWMKNGAELSLSSKRMLSHSNLVLNDIQPGDGGHYSCSVPTDRGAVVSVNYTVNVLAHVSILRGLSDQAAVAGSSVRFTCAASGNPTPNITWLLNAAPLSSSPRLKISGTSLLISSTTLQDQGIYQCMFDNGISSAQSTGRLSIQSEPQSSSISAVPVKTQPSVHPIQSDEGDELFLSMGEAALGETVGPPTERIGDRPTPEAPIIISPPQTHKPNMYDLEWRAGRDWGIAIIAYFVKYRKVDDMGNVVGSWHTVRVPGSEKSLPLSELEPSSLYEVLMVARSAAGEGQPAMLTFRTGKERASPNKNPSKAPIVSLPEKTPEDKTTNTYYGVVIHDRVPEAPDRPTISMATESSVYVTWIPRANGGSPITAFRVEYRKQGRNGDWIIAADNISPLKLSVEVRNLEPGSTYRFRVIAMNNYGESPASATSRPYQVSMSSSPVSNRPVTGPHISSTDAVSDTQILLRWTYTPSSNNNTPIQGFYIYYRPTDSDNDSDYKKDVVEGFKFWHMIGELQPETSYDIKMQCYNDGGESEYSNVMICETKARQPPGVPSLRPITPPGFYPADTPSQPGGLLYLIVGCVLGVMVLILLVFIVMCLWRNRQQNSMHKYDPPNYIYQSAEMNGHVLDYSALPGSSHVNGSVHTGCGHTAPMMPQTCHHLHHKLPNGLALLNGSGGLYPAGHPHAHDTSLHQNNMEYEHPSPHHLHNGGGIYTALPQNDSSDCMSCQNFCNNNRCYTKTNGTFSGGTLPLMHRVAARQPDGLEMMPLNPILSRCHGRDSPQLNGCQDRDSVQQAEEGNVPPLSHNSPCLPVETKSSLEQQRGVQQVQHEDSEGPVVCWERLGLDLDCKEKTAWISTGSLTGDLIQPTVQEI
Protein: Mediator complex subunit 12 (A0A8I6A1Z4)
Organism: Rattus norvegicus (Rat)
Subcellular location: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
Interaction partners:
Sequence:
MAAFGILSYEHRPLKRLRLGPPDVYPQDPKQKEDELTALNVKQGFNNQPAVSGDEHGSAKNVNFNPAKISSNFSSIIAEKLRCNTLSDTGRRKSLMNQKDNFWLVTARSQSAINTWFTDLAGTKPLTHLAKKVPIFSKKEEVFGYLAKYTVPVMRAAWLIKMTCAYYAAMSETKVKKKNTADPFTEWTQIITKYLWEQLQKMAEYYRPGPAGSGVCGSAIGPLPHDVEMAIRQWDYNEKLALFMFQDGMLDRHEFLTWVLECFEKIRPGEDELLKLLLPLLLRYSGEFVQSAYLSRRLAYFCTRRLALQLDGVNSHSSHVISAQSTSSLPTTPAPQPPTSNTPSTPFSDLLMCPQHRPLVFGLSCILQTILLCCPSALVWHYSLTDSRIKTGSPLDHLPIAPSNLPMPEGNSAFTQQVRAKLREIEQQIKERGQAVEVRWSFDKCQEATAGFTIGRVLHTLEVLDSHSFERSDFSNSLDSLCNRIFGLGPSKDGHEISSDDDAVVSLLCEWAVSCKRSGRHRAMVVAKLLEKRQAEIEAERCGESEAADEKGSVASGSLSAPSAPIFQDVLLQFLDTQAPMLTDPRSESERVEFFNLVLLFCELIRHDVFSHNMYTCTLISRGDLAFGTPGPRPPSPFDDPADDPERKEAEGSSSSKLEDPGLSESMDIDPSSSVLFEDMEKPDFSLFSPTMPCEGKGSPSPEKPDVEKDVKPPPKEKIEGTLGILYDQPRHVQYATHFPIPQEESCSHECNQRLVVLFGVGKQRDDARHAIKKITKDILKVLNRKGTAETDQLAPIVPLNPGDLTFLGGEDGQKRRRNRPEAFPTAEDIFAKFQHLSHYDQHQVTAQVSRNVLEQITSFALGMSYHLPLVQHVQFVFDLMEYSLSISGLIDFAIQLLNELSVVEAELLLKSSDLVGSYTTSLCLCIVAVLRHYHACLILNQDQMAQVFEGLCGVVKHGMNRSDGSSAERCILAYLYDLYTSCSHLKSKFGELFSDFCSKVKNTIYCNVEPSESNMRWAPEFMIDTLENPAAHTFTYTGLGKSLSENPANRYSFVCNALMHVCVGHHDPDRVNDIAILCAELTGYCKSLSAEWLGVLKALCCSSNNGTCGFNDLLCNVDVSDLSFHDSLATFVAILIARQCLLLEDLIRCAAIPSLLNAACSEQDSEPGARLTCRILLHLFKTPQLNPCQSDGNKPTVGIRSSCDRHLLAASQNRIVDGAVFAVLKAVFVLGDAELKGSGFTVPGGTEELPEEEGGGGSSGRRQGGRNISVETASLDVYAKYVLRSICQQEWVGERCLKSLCEDSNDLQDPVLSSAQAQRLMQLICYPHRLLDSEDGENPQRQRIKRILKNLDQWTMRQSSLELQLMIKQTPNTEMNSLLENIAKATIEVFQQSAETGSSSGSTASNMPSSSKAKPVLSSLERSGVWLVAPLIAKLPTSVQGHVLKAAGEELEKGQHLGSSSRKERDRQKQKSMSLLSQQPFLSLVLTCLKGQDEQREGLLASLHSQVHQIVINWRENQYLDDCKPKQLMHEALKLRLNLVGGMFDTVQRSTQQTTEWAQLLLEIIISGTVDMQSNNELFTTVLDMLSVLINGTLAADMSSISQGSMEENKRAYMNLVKKLQKDLGERQSDSLEKVHQLLPLPKQNRDVITCEPQGSLIDTKGNKIAGFDSIFKKEGLQVSTKQKISPWELFEGLKPSTAPLSWAWFGTVRVDRRVARGEEQQRLLLYHTHLRPRPRAYYLEPLPLPPEDEEPPAPALLEPEKKAPEPPKTDKPGTAPPSTEERKKKSTKGKKRSQPATKSEDYGMGPGRSGPYGVTVPPDLLHHANPGSISHLSYRQSSMGLYTQNQPLPAGGPRVDPYRPVRLPMQKLPTRPTYPGVLPTTMTTVMGLEPSSYKTSVYRQQQPTVPQGQRLRQQLQQSQGMLGQSSVHQMTPSSSYGLQSSQGYTSYVSHVGLQQHTGPAGTMVPPSYSSQPYQSTHPSTNPTLVDPTRHLQQRPSGYVHQQAPTYGHGLTSTQRYPK
Protein: Cation transporter protein, putative (Q386W8)
Organism: Trypanosoma brucei brucei (strain 927/4 GUTat10.1)
Subcellular location: Membrane {ECO:0000256|ARBA:ARBA00004141}; Multi-pass membrane protein {ECO:0000256|ARBA:ARBA00004141}.
Interaction partners:
Sequence:
MLPGFPYKGNDISVANAISQLFSSRRERNLAMFLLLTTGVMVLELVYGIAVNSLGLISDAFHMMLDSASIAIGLCAAVVASFPSDERRYPFGYARYEVLGGFVNAVLLLFIAWYVTLESIERIIKPPEIEAGYLIQVSLIGLIVNILGIIFFHGMHGHSHAHGGCSGSVDHNIRGVYLHILADLLGSISVMTSSIIITLTGARISDPICSILCSFFIAASAFPLLEETGKVLLLSNQPYGELSFFQTLISEICSVVGVKRVLCLCAWTHSTSPRDSSLCAVKLLKHDSADQSSVRGLVKGSIRSFITSATGVRNTGIIVHVE
Protein: Ras-GTPase-activating protein SH3-domain-binding protein (cDNA, FLJ92947, Homo sapiens Ras-GTPase-activating protein SH3-domain-bindingprotein (G3BP), mRNA) (Q5U0Q1)
Organism: Homo sapiens (Human)
Subcellular location: Cytoplasm, Stress granule {ECO:0000256|ARBA:ARBA00004210}.
Interaction partners:
Sequence:
MVMEKPSPLLVGREFVRQYYTLLNQAPDMLHRFYGKNSSYVHGGLDSNGKPADAVYGQKEIHRKVMSQNFTNCHTKIRHVDAHATLNDGVVVQVMGLLSNNNQALRRFMQTFVLAPEGSVANKFYVHNDIFRYQDEVFGGFVTEPQEESEEEVEEPEERQQTPEVVPDDSGTFYDQAVVSNDMEEHLEEPVAEPEPDPEPEPEQEPVSEIQEEKPEPVLEETAPEDAQKSSSPAPADIAQTVQEDLRTFSWASVTSKNLPPSGAVPVTGIPPHVVKVPASQPRPESKPESQIPPQRPQRDQRVREQRINIPPQRGPRPIREAGEQGDIEPRRMVRHPDSHQLFIGNLPHEVDKSELKDFFQSYGNVVELRINSGGKLPNFGFVVFDDSEPVQKVLSNRPIMFRGEVRLNVEEKKTRAAREGDRRDNRLRGPGGPRGGLGGGMRGPPRGGMVQKPGFGVGRGLAPRQ
Protein: Inner membrane protein YbjO (P0AAZ0)
Organism: Escherichia coli (strain K12)
Subcellular location: Cell inner membrane; Multi-pass membrane protein.
Interaction partners:
- Inner membrane protein YedI
- 23S rRNA
- Putrescine transport system permease protein PotI
Sequence:
MEDETLGFFKKTSSSHARLNVPALVQVAALAIIMIRGLDVLMIFNTLGVRGIGEFIHRSVQTWSLTLVFLSSLVLVFIEIWCAFSLVKGRRWARWLYLLTQITAASYLWAASLGYGYPELFSIPGESKREIFHSLMLQKLPDMLILMLLFVPSTSRRFFQLQ
Protein: Replication factor C subunit 2 (Activator 1 40 kDa subunit) (A1 40 kDa subunit) (Activator 1 subunit 2) (Replication factor C 40 kDa subunit) (RF-C 40 kDa subunit) (RFC40) (P35250)
Organism: Homo sapiens (Human)
Function: The elongation of primed DNA templates by DNA polymerase delta and epsilon requires the action of the accessory proteins proliferating cell nuclear antigen (PCNA) and activator 1. This subunit binds ATP (By similarity).
Subcellular location: Nucleus {ECO:0000305}.
Interaction partners:
- Replication factor C subunit 5
- Replication factor C subunit 1
- Chromosome transmission fidelity protein 8 homolog
- Replication factor C subunit 4
- Sister chromatid cohesion protein DCC1
- Proliferating cell nuclear antigen
- Replication factor C subunit 3
- Cell cycle checkpoint protein RAD17
- ATPase family AAA domain-containing protein 5
- Chromosome transmission fidelity protein 18 homolog
Sequence:
MEVEAVCGGAGEVEAQDSDPAPAFSKAPGSAGHYELPWVEKYRPVKLNEIVGNEDTVSRLEVFAREGNVPNIIIAGPPGTGKTTSILCLARALLGPALKDAMLELNASNDRGIDVVRNKIKMFAQQKVTLPKGRHKIIILDEADSMTDGAQQALRRTMEIYSKTTRFALACNASDKIIEPIQSRCAVLRYTKLTDAQILTRLMNVIEKERVPYTDDGLEAIIFTAQGDMRQALNNLQSTFSGFGFINSENVFKVCDEPHPLLVKEMIQHCVNANIDEAYKILAHLWHLGYSPEDIIGNIFRVCKTFQMAEYLKLEFIKEIGYTHMKIAEGVNSLLQMAGLLARLCQKTMAPVAS
Protein: CACCC box-binding protein (Q15552)
Organism: Homo sapiens (Human)
Interaction partners:
Sequence:
MNIDDKLEGLFLKCGGIDEMQSSRTMVVMGGVSGQSTVSGELQDSVLQDRSMPHQEILAADEVLQESEMRQQDMISHDELMVHEETVKNDEEQMETHERLPQGLQYALNVPISVKQEITFTDVSEQLMRDKKQIREPVDLQKKKKRKQRSPAKILTINEDGSLGLKTPKSHVCEHCNAAFRTNYHLQRHVFIHTGEKPFQCSQCDMRFIQKYLLQRHEKIHTGEKPFRCDECGMRSIQKYHMERHKRTHSGEKPYQCEYCLQYFSRTDRVLKHKRIGHENHDKKLNTCAMKGGLLRSEEDSGFSTSPKDNSLPKKKRQKTEKKSSGMDKESALDKSDLKKDKNDYLPVYSSSTKVKDEYMVAEYAVEMPHSSVGGSHLEDASGEIHPPKLVLKKINSKRSLKQPLEQNHTISPLSTYEERKFQSMLLNLWINRLYWTQKAMLTLIRLIICRRAQ
Protein: Hyrax (Hyrax, isoform B) (LD47989p) (Q9VHI1)
Organism: Drosophila melanogaster (Fruit fly)
Subcellular location: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
Interaction partners:
- RNA polymerase II-associated factor 1 homolog
- Ctr9, isoform A
- Uncharacterized protein
- RNA polymerase-associated protein Rtf1
- Transcription elongation factor SPT5
- FACT complex subunit spt16
- Transcription elongation factor SPT4
- FACT complex subunit Ssrp1
- Another transcription unit protein
- Transcription elongation factor SPT6
Sequence:
MADPLSLLRQYNINKKEIVERDSQIIFGEFSWPKSVKTNYLKYGSGKKGAPREYYTLECLLYLLKNVMLQHSVYVRQCAAEDIPAVNRPDRKELLAYLNGETPTCASIDKSAPLEIPTQVKRAAEGEPSSVEVAAKKARFEETQVQKVREQLAARWDVNQKETAVNMDNIKSLSETMSVEKIAAIKAKRLANKRTTIKRTDNDEAMGTDLRAILDYDVDSTKDIISRERQWRTRTSILQSTGKIFAKNIFAMLQGIKAREEGRNRPQVPNPIKMPEPARIAKPQPQLSQYNRYDQERFNRQKEETEGFKIDTLGTYHGMSLKSVTEGSLAQRKAQANNLPGAPGVIAGAAAGRPKELLPAAQARQLPANGPSKRTSRTPIIIIPSANTSLITMLNAKDILQELRFMSTSDKKLQGCQRECEVLLQRKRNNQTVSYRVIDNPTKLSQQEWQRVVAVFVMGPQWQFKGWPWEGNPVDIFSKICAFHLCFSEMKLDSNVERWSVTLLRLSQNKRHMDRAVLSKFWETLDKYIAKYKPDLRY
Protein: Phenol 2-monooxygenase, oxygenase component DmpL (EC 1.14.13.244) (Phenol 2-monooxygenase P1 component) (Phenol hydroxylase P1 protein) (P19730)
Organism: Pseudomonas sp. (strain CF600)
Function: Part of a multicomponent enzyme which catalyzes the degradation of phenol and some of its methylated derivatives. DmpL, DmpN and DmpO form the oxygenase component of the complex. Required for growth on phenol and for in vitro phenol hydroxylase activity.
Interaction partners:
Sequence:
MSVEIKTNTVDPIRQTYGNLQRRFGDKPASRYQEASYDIEAVTNFHYRPLWDPQHELHDPTRTAIRMTDWHKVTDPRQFYYGAYVQTRARMQEATEHAYGFCEKRELLSRLPAELQAKLLRCLVPLRHAELGANMNNSSIAGDSIAATVTQMHIYQAMDRLGMGQYLSRIGLLLDGGTGEALDQAKAYWLDDPIWQGLRRYVEDSFVIRDWFELGLAQNLVLDGLLQPLMYQRFDQWLTENGGSDVAMLTEFMRDWYGESTRWVDAMFKTVLAENDANREQVQAWLEVWEPRAYEALLPLAEEATGIAALDEVRSAFATRLQKIGLKSREE
Protein: Auxin-responsive protein IAA28 (Indoleacetic acid-induced protein 28) (Q9XFM0)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations. Repression is thought to result from the interaction with auxin response factors (ARFs), proteins that bind to the auxin-responsive promoter element (AuxRE). Formation of heterodimers with ARF proteins may alter their ability to modulate early auxin response genes expression.
Subcellular location: Nucleus {ECO:0000250}.
Interaction partners:
- Protein TRANSPORT INHIBITOR RESPONSE 1
- Auxin transporter protein 1
- Auxin response factor 5
- Auxin response factor 18
- Auxin response factor 6
- Auxin response factor 9
- Auxin response factor 7
- GATA transcription factor 23
- Auxin-responsive protein IAA6
- Auxin response factor 12
Sequence:
MEEEKRLELRLAPPCHQFTSNNNINGSKQKSSTKETSFLSNNRVEVAPVVGWPPVRSSRRNLTAQLKEEMKKKESDEEKELYVKINMEGVPIGRKVNLSAYNNYQQLSHAVDQLFSKKDSWDLNRQYTLVYEDTEGDKVLVGDVPWEMFVSTVKRLHVLKTSHAFSLSPRKHGKE
Protein: Netrin 4 (A0A0R4IFE9)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Subcellular location: Secreted {ECO:0000256|ARBA:ARBA00004613}.
Interaction partners:
- Neogenin
- Neogenin 1b
- Netrin receptor UNC5
- Unc-5 netrin receptor B.
- Unc-5 netrin receptor C.
- Si:ch73-72b7.1.
- Netrin g1a.
- Cell adhesion molecule DSCAM
Sequence:
MKSCSYMQSEGLRSGVGFPCLLWIKPLMLLDTRNLWICVCFSSPGLMSTMELTGRCVLLAALVMSVPHHACSGCVNRVCNPRMGNLAVGRPIQTVSQCGSTSPEQFCMYRPDSCVLDCEICDASVSQHAHSPSSMTDSPFKQPLTWWQSAPGTAIETLQLDLEVEFYFTHLIIIFMSPRPAAMAIDRSRDFGQTWSLLMLFSHNCSEVSSLEDGQRCTAKYSSAEPCTNGEVIYRALSPYERLDPYSTDARSLLGVTNVRIRLLQPHSCPCPIADANAATPRYAISDLILKGGCLCHGHADQCVPTGGKHNSKTFGKHVVHGKCLCRHHTAGDHCERCHRLYNDRPWRAADGLTGEANQCVECKCNGHAESCHFDESVWLRSGQQHGGVCDCLHNTTGQHCQHCQSGFYRDPEKPSTAPDSCTPCMCNHVGSSYCKPDNGECVCKPGVAGRHCEQCMLGYWGLDEYGCKPCQCAGDCDPYTGDCMIRSESDDNSTAENHLFRTEELFSALSHPDKCICKQQALGNSKVFCNAKYAYAVKVRVLGAHDKGSHAEVDVKILKVLWDNTRLRLSRGSRTLYPESWMSRGCTCPVLFPGLEYLVVGHEDVRKGRPVVNMKSIVKPWRASLSRKVHQLLKTKCS