wanglab/gogpt-training-data huggingface dataset:
Protein: Melanopsin (Opsin-4) (Q9QXZ9)
Organism: Mus musculus (Mouse)
Function: Photoreceptor that binds cis-retinaldehydes. Contributes to pupillar reflex, photoentrainment and other non-image forming responses to light. May be involved in the optokinetic visual tracking response. May be involved in the regulation of retinal hyaloid vessel growth and regression.
Subcellular location: Cell membrane {ECO:0000269|PubMed:19793992}; Multi-pass membrane protein {ECO:0000255}. Cell projection, axon {ECO:0000269|PubMed:11834834}. Cell projection, dendrite {ECO:0000269|PubMed:11834834}. Perikaryon {ECO:0000269|PubMed:11834834}.
Interaction partners:
- Beta-adrenergic receptor kinase 1
- Cyclic nucleotide-gated channel alpha-3
- Guanine nucleotide-binding protein G
- Hypocretin neuropeptide precursor
- Cryptochrome-1
- Cryptochrome-2
- Period circadian protein homolog 2
- POU domain, class 4, transcription factor 2
- Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta
- POU domain, class 4, transcription factor 1
Sequence:
MDSPSGPRVLSSLTQDPSFTTSPALQGIWNGTQNVSVRAQLLSVSPTTSAHQAAAWVPFPTVDVPDHAHYTLGTVILLVGLTGMLGNLTVIYTFCRNRGLRTPANMFIINLAVSDFLMSVTQAPVFFASSLYKKWLFGETGCEFYAFCGAVFGITSMITLTAIAMDRYLVITRPLATIGRGSKRRTALVLLGVWLYALAWSLPPFFGWSAYVPEGLLTSCSWDYMTFTPQVRAYTMLLFCFVFFLPLLIIIFCYIFIFRAIRETGRACEGCGESPLRQRRQWQRLQSEWKMAKVALIVILLFVLSWAPYSTVALVAFAGYSHILTPYMSSVPAVIAKASAIHNPIIYAITHPKYRVAIAQHLPCLGVLLGVSGQRSHPSLSYRSTHRSTLSSQSSDLSWISGRKRQESLGSESEVGWTDTETTAAWGAAQQASGQSFCSQNLEDGELKASSSPQVQRSKTPKVPGPSTCRPMKGQGARPSSLRGDQKGRLAVCTGLSECPHPHTSQFPLAFLEDDVTLRHL
Protein: Cathelicidin-3 (Fowlicidin-3) (C4PFJ9)
Organism: Gallus gallus (Chicken)
Subcellular location: Secreted {ECO:0000256|ARBA:ARBA00004613}.
Interaction partners:
Sequence:
MLSCWVLLLALLGGACALPAPLGYSQALAQAVDSYNQRPEVQNAFRLLSADPEPGPNVQLSSLHNLNFTIMETRCQARSGAQLDSCEFKEDGLVKDCAAPVVLQGGRAVLDVTCVDSMADPVRVKRFWPLVPVAINTVAAGINLYKAIRRK
Protein: Mitosis inhibitor protein kinase wee1 (EC 2.7.10.2) (P107 protein kinase homolog) (P07527)
Organism: Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Function: Protein kinase that acts both on serines and on tyrosines. It acts as a dosage-dependent negative regulator of entry into mitosis (G2 to M transition). Phosphorylates and inhibits cdc2.
Subcellular location: Nucleus {ECO:0000269|PubMed:10759889}.
Interaction partners:
- Cyclin-dependent kinase 1
- G2/mitotic-specific cyclin cdc13
- M-phase inducer phosphatase
- Mitosis inducer protein kinase cdr1
- Mitosis inducer protein kinase cdr2
- G2/mitotic-specific cyclin cig2
- Serine/threonine-protein kinase plo1
- Protein arginine N-methyltransferase skb1
- Serine/threonine-protein kinase chk1
- Serine/threonine-protein kinase cds1
Sequence:
MSSSSNTSSHRSYGLRRSQRSMNLNRATLLAPPTPSSLYDANNSTSSTSSQKPNTSFTSLFGPRKQTTSSPSFSHAAPLHPLSPPSFTHSQPQIQAQPVPRRPSLFDRPNLVSRSSSRLGDSPSLSPVAQVANPIHHTAPSPSDVRAFPIHKNASTGVKRSFFSSSMSNGAMSPPSHSPSPFLQSSQHIPPSTPAQKLRKKNNFDSFRISNSHISPFASGSFSPFATSSPNFLSTSTPAPPNSNNANPSTLFSSIPSSRHTTSNHFPSNSAQSSLFSPTARPLTARKLGFASSQTKSAVSNNHSRNSSKDASFMMKSFIPSNRSHPQTQQNESSLFSDNSMVNSSSNSFSLFPNATLPNPPSSELLTTPFQQIKPPSQVFMSTGLLSKQHRPRKNINFTPLPPSTPSKPSTFVRPHSSSTDSPPSPSTPSNTQTDSYFIQRENTPTNHNSIPTIQLEKSSMDFLRFDPPPSAVKTSHNYGLPFLSNQRCPATPTRNPFAFENTVSIHMDGRQPSPIKSRNNNQMSFAMEEEADVSQPSSSSFTLSFPSALTSSKVSSSTSHLLTRFRNVTLLGSGEFSEVFQVEDPVEKTLKYAVKKLKVKFSGPKERNRLLQEVSIQRALKGHDHIVELMDSWEHGGFLYMQVELCENGSLDRFLEEQGQLSRLDEFRVWKILVEVALGLQFIHHKNYVHLDLKPANVMITFEGTLKIGDFGMASVWPVPRGMEREGDCEYIAPEVLANHLYDKPADIFSLGITVFEAAANIVLPDNGQSWQKLRSGDLSDAPRLSSTDNGSSLTSSSRETPANSIIGQGGLDRVVEWMLSPEPRNRPTIDQILATDEVCWVEMRRKAGAIIYEGIHGSSSNPQGDQMMEDWQVNV
Protein: Ribonucleases P/MRP protein subunit POP8 (EC 3.1.26.5) (RNA-processing protein POP8) (RNases P/MRP 15.5 kDa subunit) (P38208)
Organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Function: Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends. Also a component of RNase MRP, which cleaves pre-rRNA sequences.
Subcellular location: Nucleus {ECO:0000269|PubMed:14562095}.
Interaction partners:
- Ribonuclease P protein subunit RPR2
- Ribonucleases P/MRP protein subunit POP3
- Ribonucleases P/MRP protein subunit POP6
- Ribonuclease P/MRP protein subunit POP5
- Ribonucleases P/MRP protein subunit POP7
- Ribonuclease MRP protein subunit RMP1
- Ribonuclease P/MRP protein subunit RPP1
- Ribonucleases P/MRP protein subunit POP1
- RNases MRP/P 32.9 kDa subunit
- Ribonuclease P protein component, mitochondrial
Sequence:
MGKKTFREWQYFKLSITSFDQDVDDAHAIDQMTWRQWLNNALKRSYGIFGEGVEYSFLHVDDKLAYIRVNHADKDTFSSSISTYISTDELVGSPLTVSILQESSSLRLLEVTDDDRLWLKKVMEEEEQDCKCI
Protein: Large ribosomal subunit protein bL33m (39S ribosomal protein L33, mitochondrial) (L33mt) (MRP-L33) (O75394)
Organism: Homo sapiens (Human)
Subcellular location: Mitochondrion {ECO:0000269|PubMed:25278503, ECO:0000269|PubMed:25838379, ECO:0000269|PubMed:28892042}.
Interaction partners:
- Elongation factor Tu, mitochondrial
- Large ribosomal subunit protein uL13m
- Large ribosomal subunit protein uL4m
- Large ribosomal subunit protein bL32m
- Small ribosomal subunit protein bS16m
- Large ribosomal subunit protein bL36m
- Large ribosomal subunit protein bL21m
- Small ribosomal subunit protein uS9m
- Large ribosomal subunit protein uL23
- Large ribosomal subunit protein bL12m
Sequence:
MFLSAVFFAKSKSKNILVRMVSEAGTGFCFNTKRNRLREKLTLLHYDPVVKQRVLFVEKKKIRSL
Protein: Serine rich endogenous peptide 2 (AtSCOOP2) (Phytocytokine SCOOP2) (Precursor of serine rich endogenous peptide phytocytokine 2) (A0A1P8BDL3)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Brassicaceae-specific phytocytokine (plant endogenous peptide released into the apoplast) perceived by MIK2 in a BAK1/SERK3 and SERK4 coreceptors-dependent manner, that modulates various physiological and antimicrobial processes including growth prevention and reactive oxygen species (ROS) response regulation.
Subcellular location: Cell membrane {ECO:0000250|UniProtKB:B3H7I1}. Secreted, extracellular space, apoplast {ECO:0000250|UniProtKB:B3H7I1}. Note=The precursor of SCOOP2, PROSCOOP2, accumulates at the plasma membrane and is proteolytically cleaved to release the SCOOP2 in the apoplasm. {ECO:0000250|UniProtKB:B3H7I1}.
Interaction partners:
Sequence:
MANNLGLVILLLVIVLVSCSKSSDCALASPQKSRPSSEWRRKLIPVRSSRSPRSPSFAPKKPPPPPPSPPLSPSSPPSN
Protein: Pentatricopeptide repeat-containing protein At2g40240, mitochondrial (Q9S733)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Subcellular location: Mitochondrion {ECO:0000305}.
Interaction partners:
- Defensin-like protein 141
- YDG domain-containing protein At5g47150
- Putative ABC1 protein At2g40090
- Uncharacterized protein
- Transducin family protein / WD-40 repeat family protein
- F-box/kelch-repeat protein At5g43190
- Aspartate-glutamate racemase family
- Protein LURE 1.1
- Protein GOLVEN 5
Sequence:
MSLLRRRFVKQSVNCITFLQILAERSFSTVKIPPGRRKTTEFDKLINEAGSSGDFETVRRLLNNRIVLGSFNTSDTFKFLTNTASYSSYLEDLRRVLPQIDGGFSRKNAYDILISRLCKLGRIDDALIVIGDMSNGRLGLTPSTYHPILCSLTRKYKIEEAWRVVESMRSKSVSMDVTAYNYFLTSHCYDGELESASEVMRKIEEDGNSPDSRSYDALVLGACRAGKVEAAMAILRRMEEDGVTVLYSTHAHVITGLVEGGYYALGLEFVMAYAGKDLRLDSESFGFLAGKLVKRKRYEEAMIVVKEMVMRGLRMGDELRQFYEGNVRYDDDDEDSLVQSERECYIEQKLN
Protein: Cytochrome P450, family 706, subfamily A, polypeptide 1 (F4JLY4)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Interaction partners:
- Auxin-responsive endogenous peptide 1
- T-complex protein 1 subunit theta
- T-complex protein 1 subunit epsilon
- ATP binding / aminoacyl-tRNA ligase/ nucleotide binding protein
- Cytochrome P450 like protein
- E6-like protein
Sequence:
MSTLPLFSLHHHTTQNLQTNNQNTVRYFSLKPKMETASSNFSLSQILNIEEPYSSVMLGVAALLAVVCYFWIQGKSKSKNGPPLPPGPWPLPIVGNLPFLNSDVLHTQFQALTLKHGPLMKIHLGSKLAIVVSSPDMAREVLKTHDITFANHDLPEVGKINTYGGEDILWSPYGTHWRRLRKLCVMKMFTTPTLEASYSTRREETRQTIVHMSEMAREGSPVNLGEQIFLSIFNVVTRMMWGATVEGDERTSLGNELKTLISDISDIEGIQNYSDFFPLFSRFDFQGLVKQMKGHVKKLDLLFDRVMESHVKMVGKKSEEEEDFLQYLLRVKDDDEKAPLSMTHVKSLLMDMVLGGVDTSVNASEFAMAEIVSRPEVLNKIRLELDQVVGKDNIVEESHLPKLPYLQAVMKETLRLHPTLPLLVPHRNSETSVVAGYTVPKDSKIFINVWAIHRDPKNWDEPNEFKPERFLENSLDFNGGDFKYLPFGSGRRICAAINMAERLVLFNIASLLHSFDWKAPQGQKFEVEEKFGLVLKLKSPLVAIPVPRLSDPKLYTA
Protein: CAP-Gly domain-containing linker protein 2 (Cytoplasmic linker protein 115) (CLIP-115) (Cytoplasmic linker protein 2) (O55156)
Organism: Rattus norvegicus (Rat)
Function: Seems to link microtubules to dendritic lamellar body (DLB), a membranous organelle predominantly present in bulbous dendritic appendages of neurons linked by dendrodendritic gap junctions. May operate in the control of brain-specific organelle translocations.
Subcellular location: Cytoplasm {ECO:0000269|PubMed:9427243}. Cytoplasm, cytoskeleton {ECO:0000269|PubMed:9427243}. Note=Localizes preferentially to the ends of tyrosinated microtubules. {ECO:0000250|UniProtKB:Q9Z0H8}.
Interaction partners:
- CLIP-associating protein 2
- Microtubule-associated protein RP/EB family member 3
- Dynactin subunit 1
Sequence:
MQKPSGLKPPGRGGKHSSPVGRPSIGSASSSVVASASGSKEGSPLHKQASGPSSAGATTTVSEKPGPKAAEVGDDFLGDFVVGERVWVNGVKPGVVQYLGETQFAPGQWAGVVLDDPVGKNDGAVGGLRYFECPALQGIFTRPSKLTRQPAAEGSGSDGHSVESLTAQNLSLHSGTATPPLTGRVIPLRESVLNSSVKTGNESGSNLSDSGSVKRGDKDLHLGDRVLVGGTKTGVVRYVGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCPPKFGLFAPIHKVIRIGFPSTSPAKAKKTKRMAMGVSALTHSPSSSSISSVSSVASSVGGRPSRSGLLTETSSRYARKISGTTALQEALKEKQQHIEQLLAERDLERAEVAKATSHICEVEKEIALLKAQHEQYVAEAEEKLQRARLLVENVRKEKVDLSNQLEEERRKVEDLQFRVEEESITKGDLETQTQLEHARIGELEQSLLLEKAQAERLLRELADNRLTTVAEKSRVLQLEEELSLRRGEIEELQHCLLQSGPPPADHPEAAETLRLRERLLSASKEHQRDSTLLQDKYEHMLKTYQTEVDKLRAANEKYAQEVADLKAKVQQATTENMGLMDNWKSKLDSLASDHQKSLEDLKATLNSGPGAQQKEIGELKALVEGIKMEHQLELGNLQAKHDLETAMHGKEKEGLRQKLQEAQEELAGLQQHWRAQLEEQAAAPAELQEAQDQCRDAQLRVQELEGLDVEYRGQAQAIEFLKEQISLAEKKMLDYEMLQRAEAQSRQEAERLREKLLVAENRLQAVESLCSAQHSHVIESNDLSEEKIRMKETVEGLQDKLNKRDKEVAALTSQMDMLRAQVSALENKCKSGEKKIDSLLKEKRRLEAELEAVSRKTHDASGQLVHISQELLRKERSLNELRVLLLEANRHSPGPERDLSREVHKAEWRIKEQKLKDDIRGLREKLTGLDKEKSLSEQKRYSLIDPASAPELLRLQHQLVSTEGCLRDALDQAQQVERLVEALRGCSDRTQTISNSGSANGIHQPDKAHKQEDKH
Protein: Skywalker, isoform L (M9PDI9)
Organism: Drosophila melanogaster (Fruit fly)
Subcellular location: Cytoplasmic vesicle membrane {ECO:0000256|ARBA:ARBA00004156}. Endomembrane system {ECO:0000256|ARBA:ARBA00004184}; Peripheral membrane protein {ECO:0000256|ARBA:ARBA00004184}. Synapse {ECO:0000256|ARBA:ARBA00034103}.
Interaction partners:
Sequence:
MPYHRGGDASSQADKLSGIVEESDLYEGFAPHVETSEIKTLDFYNLPKQTGKEPALRSYTEIQQLLQQGKKRDVKNILRENSWPINSPIRAQLWPMLCGQHQTKQQMLDGFYWEMVHQVFGTTELSEKPIMLPAFVDATHCLPYHLTSTGRAVADRIVNVLGYDCPDITYSPVLYPITSILLHFMSEEEAYICLAGLVGSKEKVFINQTKLQHEVTWKTVMQIAKKHTKSATSYFQRICPGLKLERIFMDWCWWILAGLPFQHLVRIMDCYFHEGIKVLYRVALVILNLFHKECQSNNEWSPDNIKNDIGNALIKFCKKIPVSPAKLLHAAFSIRGLSTQYISRIFIKTEMLLKSRSVLTSGSKQLIKSRSSDNLPTSQSQVNIQMMSHTLTIRELHSESCRNLGEKSPGHRAIAMGVYPIHNLKSQACKNEDLFTLWSWLPVRITMYQPVLLYTTEEHGCSLTTFYVRVEQHEPTLLMIKTCNNEVFGAYCSSRWFERNVKDDKGQRQAYFGTGETFLFSLYPERAKYPWVGIEGDKDLGHSSELFMAADSKMITIGGGEGQAIWMDENIRFGKTDSCKTFNNPPLCPSGDFEIRVLEVYGFVGI
Protein: Thyroid hormone receptor interactor 11 (Q8BVJ9)
Organism: Mus musculus (Mouse)
Subcellular location: Golgi apparatus {ECO:0000256|ARBA:ARBA00004555}.
Interaction partners:
Sequence:
MSSWLGGLGSGLGQSLGQVGGSLASLTGQISNFTKDMLLEGTEDVPDFPNSGREENEATHSVLRSENERLKKLYTDLEEKHEASELQIKQQSSSYRSQLQQKEEEINHLKARQLALQDELLRLQSAAQSAHLGSGSAPAASASSSFSYGVSHRVSAFHEDDMDFGDVISSQQEINRLSNEVSRLESELGHWRHIAQTKVQGAQSSDQTEICKLQNIIKELKQNRSQDLDDHQHELSALQNAHQQKLTEISRRHREELSDYEERIEELENLLQQGGSGVTVTDHSKVYEMQNTIQILQMEKVESTKQIEDLENKIKEIHKRLSSAEHDQEVWKKEQERLEVEKREMTEQCERLKLELSEAQQSALRQSDAAVEEETILPHSSSVAEVLRLQQALTDAENEIMRLRSLNQDISLAEDNQKLQMCVQTLEKEKSLLSQEKEELQISLSKLSSEYEVIKSTATRDLDLFSQVHDLKHNLEAKEQELNQSIHENEILMAELEELDKQNQEATKHVILIKDQLSKQQSEGDSV
Protein: Small ribosomal subunit protein RACK1 (Guanine nucleotide-binding protein subunit beta-like protein) (P46800)
Organism: Dictyostelium discoideum (Social amoeba)
Interaction partners:
- Small ribosomal subunit protein eS30
- Small ribosomal subunit protein uS3
- Small ribosomal subunit protein uS5
- Small ribosomal subunit protein eS12
- Small ribosomal subunit protein eS7
- Small ribosomal subunit protein uS2
- Large ribosomal subunit protein uL10
- Small ribosomal subunit protein eS10
- Small ribosomal subunit protein eS26
- Small ribosomal subunit protein eS6
Sequence:
MEQQKAPQVTYLEVGSLVGHNGFVTSIAVSPENPDTIISSSRDKTVMVWQLTPTDATSPGKAHRSLKGHSHFVQDVVISHDGQFALSGSWDNTLRLWDITKGVSTRLFKGHTQDVMSVAFSSDNRQIISGSRDATIKVWNTLGECKFTLEGPEAHQDWVSCIRFSPNTPTIVSGSWDNKVKIWDIKSFKCNHTLTDHTGYVNTVTISPDGSLCASGGKDTFACLWELSSGKPLYKLEARNTINALAFSPNKYWLSAATDDKIIIWDLLTKQVLAEIVPEVKEQAFDSKKKKESKPKAPACLSLAWSADGSVLYAGYNDGLIRVYKSSSQ
Protein: Vacuolar protein sorting-associated protein 54 (Hepatocellular carcinoma protein 8) (Tumor antigen HOM-HCC-8) (Tumor antigen SLP-8p) (Q9P1Q0)
Organism: Homo sapiens (Human)
Function: Acts as component of the GARP complex that is involved in retrograde transport from early and late endosomes to the trans-Golgi network (TGN). The GARP complex is required for the maintenance of the cycling of mannose 6-phosphate receptors between the TGN and endosomes, this cycling is necessary for proper lysosomal sorting of acid hydrolases such as CTSD. Within the GARP complex, required to tether the complex to the TGN. Not involved in endocytic recycling.
Subcellular location: Golgi apparatus, trans-Golgi network {ECO:0000269|PubMed:18367545, ECO:0000269|PubMed:25799061}. Membrane {ECO:0000250|UniProtKB:Q9JMK8}. Note=Associates with membranes in an EIPR1-independent manner. {ECO:0000250|UniProtKB:Q9JMK8}.
Interaction partners:
- Vacuolar protein sorting-associated protein 53 homolog
- Vacuolar protein sorting-associated protein 51 homolog
- Vacuolar protein sorting-associated protein 52 homolog
- Syndetin
- Syntaxin-16
- Syntaxin-6
- EARP and GARP complex-interacting protein 1
- Vesicle-associated membrane protein 4
- Conserved oligomeric Golgi complex subunit 4
- Conserved oligomeric Golgi complex subunit 6
Sequence:
MASSHSSSPVPQGSSSDVFFKIEVDPSKHIRPVPSLPDVCPKEPTGDSHSLYVAPSLVTDQHRWTVYHSKVNLPAALNDPRLAKRESDFFTKTWGLDFVDTEVIPSFYLPQISKEHFTVYQQEISQREKIHERCKNICPPKDTFERTLLHTHDKSRTDLEQVPKIFMKPDFALDDSLTFNSVLPWSHFNTAGGKGNRDAASSKLLQEKLSHYLDIVEVNIAHQISLRSEAFFHAMTSQHELQDYLRKTSQAVKMLRDKIAQIDKVMCEGSLHILRLALTRNNCVKVYNKLKLMATVHQTQPTVQVLLSTSEFVGALDLIATTQEVLQQELQGIHSFRHLGSQLCELEKLIDKMMIAEFSTYSHSDLNRPLEDDCQVLEEERLISLVFGLLKQRKLNFLEIYGEKMVITAKNIIKQCVINKVSQTEEIDTDVVVKLADQMRMLNFPQWFDLLKDIFSKFTIFLQRVKATLNIIHSVVLSVLDKNQRTRELEEISQQKNAAKDNSLDTEVAYLIHEGMFISDAFGEGELTPIAVDTTSQRNASPNSEPCSSDSVSEPECTTDSSSSKEHTSSSAIPGGVDIMVSEDMKLTDSELGKLANNIQELLYSASDICHDRAVKFLMSRAKDGFLEKLNSMEFITLSRLMETFILDTEQICGRKSTSLLGALQSQAIKFVNRFHEERKTKLSLLLDNERWKQADVPAEFQDLVDSLSDGKIALPEKKSGATEERKPAEVLIVEGQQYAVVGTVLLLIRIILEYCQCVDNIPSVTTDMLTRLSDLLKYFNSRSCQLVLGAGALQVVGLKTITTKNLALSSRCLQLIVHYIPVIRAHFEARLPPKQYSMLRHFDHITKDYHDHIAEISAKLVAIMDSLFDKLLSKYEVKAPVPSACFRNICKQMTKMHEAIFDLLPEEQTQMLFLRINASYKLHLKKQLSHLNVINDGGPQNGLVTADVAFYTGNLQALKGLKDLDLNMAEIWEQKR
Protein: Beta-crystallin B3 (Beta-B3 crystallin) [Cleaved into: Beta-crystallin B3, N-terminally processed] (P26998)
Organism: Homo sapiens (Human)
Function: Crystallins are the dominant structural components of the vertebrate eye lens.
Interaction partners:
- Alpha-crystallin A2
- Alpha-crystallin B chain
- N-acetyllactosaminide beta-1,6-N-acetylglucosaminyl-transferase
- Gap junction alpha-8 protein
- Filensin
- Beta-crystallin A3
- Lens fiber membrane intrinsic protein
- Gap junction alpha-3 protein
- Phakinin
- CCA tRNA nucleotidyltransferase 1, mitochondrial
Sequence:
MAEQHGAPEQAAAGKSHGDLGGSYKVILYELENFQGKRCELSAECPSLTDSLLEKVGSIQVESGPWLAFESRAFRGEQFVLEKGDYPRWDAWSNSRDSDSLLSLRPLNIDSPHHKLHLFENPAFSGRKMEIVDDDVPSLWAHGFQDRVASVRAINGTWVGYEFPGYRGRQYVFERGEYRHWNEWDASQPQLQSVRRIRDQKWHKRGRFPSS
Protein: Glucose-1-phosphate adenylyltransferase small subunit, chloroplastic (EC 2.7.7.27) (ADP-glucose pyrophosphorylase) (ADP-glucose synthase) (AGPase B) (Alpha-D-glucose-1-phosphate adenyl transferase) (P55228)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: This protein plays a role in synthesis of starch. It catalyzes the synthesis of the activated glycosyl donor, ADP-glucose from Glc-1-P and ATP.
Subcellular location: Plastid, chloroplast {ECO:0000250}.
Interaction partners:
- Granule-bound starch synthase 1, chloroplastic/amyloplastic
- Phosphoglucomutase, chloroplastic
- Probable phosphoglucomutase, cytoplasmic 1
- Probable phosphoglucomutase, cytoplasmic 2
- Probable starch synthase 4, chloroplastic/amyloplastic
- Sucrose synthase 3
- Sucrose synthase 5
- Sucrose synthase 6
- Sucrose-phosphate synthase 1
- Sucrose synthase 2
Sequence:
MASVSAIGVLKVPPASTSNSTGKATEAVPTRTLSFSSSVTSSDDKISLKSTVSRLCKSVVRRNPIIVSPKAVSDSQNSQTCLDPDASSSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEYLILAGDHLYRMDYEKFIQAHRETDADITVAALPMDEQRATAFGLMKIDEEGRIIEFAEKPKGEHLKAMKVDTTILGLDDQRAKEMPFIASMGIYVVSRDVMLDLLRNQFPGANDFGSEVIPGATSLGLRVQAYLYDGYWEDIGTIEAFYNANLGITKKPVPDFSFYDRSAPIYTQPRYLPPSKMLDADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDSLLMGADYYETATEKSLLSAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIINSDNVQEAARETDGYFIKSGIVTVIKDALIPTGTVI
Protein: Thyroxine-binding globulin (Serpin A7) (T4-binding globulin) (P05543)
Organism: Homo sapiens (Human)
Function: Major thyroid hormone transport protein in serum.
Subcellular location: Secreted.
Interaction partners:
- Transthyretin
- Albumin
- Alpha-2-HS-glycoprotein
- UDP-glucuronosyltransferase 2B10
- Fibrinogen alpha chain
- Serpin A11
- Apolipoprotein A-V
- Sodium-dependent phosphate transport protein 3
- Sex hormone-binding globulin
- Prothrombin
Sequence:
MSPFLYLVLLVLGLHATIHCASPEGKVTACHSSQPNATLYKMSSINADFAFNLYRRFTVETPDKNIFFSPVSISAALVMLSFGACCSTQTEIVETLGFNLTDTPMVEIQHGFQHLICSLNFPKKELELQIGNALFIGKHLKPLAKFLNDVKTLYETEVFSTDFSNISAAKQEINSHVEMQTKGKVVGLIQDLKPNTIMVLVNYIHFKAQWANPFDPSKTEDSSSFLIDKTTTVQVPMMHQMEQYYHLVDMELNCTVLQMDYSKNALALFVLPKEGQMESVEAAMSSKTLKKWNRLLQKGWVDLFVPKFSISATYDLGATLLKMGIQHAYSENADFSGLTEDNGLKLSNAAHKAVLHIGEKGTEAAAVPEVELSDQPENTFLHPIIQIDRSFMLLILERSTRSILFLGKVVNPTEA
Protein: Chaperone protein DNAJ, putative (Q4GZ96)
Organism: Trypanosoma brucei brucei (strain 927/4 GUTat10.1)
Interaction partners:
Sequence:
MRGITLALAPPSLLFVPKIQRRCFNVIQRGNDREVDSLFALLGFAGDNEAHRIRRTRAELRQGFMREAMKLKDPQNDKSDAAKLEKLREAYQLLSNDRFRVQYAAHHYASPDASLHLLVDGGQVAANFNPEHQSFNFVDHAISRAAMSPSSRSSSDKQRSFSDFTGQYNSVIGNTGCSTDARPYNAPEARAAINGAGINFMLRISFDESVLGCTKTAVYEKNVSCQRCSGNGRMVLKRPRKCPQCRGRGSTHLPSATYHIERSCTYCNGDGVTPPPKCSGCRGAGVVPGHTVQVPVDIRPGTTNMTACRLRGMGHDGVRGGVAGDLIVTVLVQEHRVFHRDGLDLHMVLPITLSTALLGGMVSVPLLHGPFCTRVPPCVRNGQQIRLSGRGVTLDGSGVLTNAEEGIDTDSSASKQEQQQRGDLYIHLLVVIPKGEELTGAQRSALEQFVVEQDGNGAEGVDDITPTALKRRFRHWLPGT
Protein: Methionyl-trna formyltransferase (EC 2.1.2.9) (Q381N8)
Organism: Trypanosoma brucei brucei (strain 927/4 GUTat10.1)
Interaction partners:
- Bifunctional dihydrofolate reductase-thymidylate synthase
- Aminomethyltransferase
- methionine--tRNA ligase
- Tyrosyl/methionyl-tRNA synthetase, putative
- cysteine--tRNA ligase
- C-1-tetrahydrofolate synthase, cytoplasmic, putative
- Uncharacterized protein
- ferroxidase
- ATPase, putative
- NOL1/NOP2/Sun domain family member 4
Sequence:
MRQCISRCGHSVARACFWSHISSFLVNRRSRSSTTDPPAPSTMVGCVEQVTITGNGDKTRGTPNCAFTVCGMSKPPSIIFFGGDIVSLVALKALHNRLQLIMDARPLQEKGCSAATGSEKSQLVVVCPFLPADPFTVFKQYRRQYPVARYCVEHGIPLVPVDHPTSMAKSKTLEYLLHPKHLPTPVISGVAQVDHIAGRPLEMFDVAVVVSFRYFLPNKLLEKLRFTVNLHPSLLPRYRGASPIFAPLLRGDDKGGVSVIKLPPRGMFMDGGDVLLQRTIPIPPEMTIREYFPSVTEQGAEALCECLFGKVPVAPALSSPPGCLHLGPAVASGYCDWPRTFNALWNAAWKQGHDLHFTKDPWHAPLLKRESAVIYWHKVTADEAYGIWRAFVGGEYFSPTINATLDKGATPVRGQLIKRLLSRTVCELEKQTVWHRGDQLSGERCNEGLPKEQQRDGHGGGGTDEGGNAVQRKDITVASSKPSEKVDDAEDAGSHDHFRHRLLVRCTFTDAVYPQGTPSAVQWELQRLEQGTVTHFRNLHDCGDCGSNAPTTESFIEAGSAYFPKSAEDICAVKCRVGWFLWNAVVLEGSRKQSAGLLRKGMAMKTGVLYPRLFVVQANDKGKCSSRDIGGRSASNANATVTACRSNLASC
Protein: Ferredoxin (P83583)
Organism: Solanum lyratum (Lyreleaf nightshade)
Function: Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.
Subcellular location: Plastid, chloroplast {ECO:0000269|PubMed:12620316}.
Interaction partners:
Sequence:
ATYKVKLITPEGPVEFNCPDDVYILDSAEENGHDLPYSCRAGACSSCAGKITAGNVDQSDNSFLDDDQVAEGFVLTCVAYPKSNVTIETHKEDDLVG
Protein: Exocyst complex component 7 (Exocyst complex component Exo70) (P91149)
Organism: Caenorhabditis elegans
Interaction partners:
- Exocyst complex component 6
- Exocyst component Exo84 C-terminal domain-containing protein
- Exocyst complex component 4
- Exocyst complex component 5
- Exocyst complex component 2
- Exocyst complex component 1
- Exocyst complex component 3
- RNA polymerase II-associated protein 3
- Myosin motor domain-containing protein
- Ras-related protein rab-11.1
Sequence:
MLVVYYFYCFPFFSVNSRIFPMASDQNAAESIAKKLAQEEEWLQNFQKNIAKSAQIRQGIEQVVEKFDQRLSSLEKNVLPMHISNGKLQKKQHNIQRLINTIDATLQFYGKTSTVENAINSGNPSVDLDPYLENMESLQQAIIFFETHPNYRSQTDNMRITLDTGYTMLEKAYKNFLLKNSITVDPAPFVKNELTPRLSEIKIMTDEEPIIKIGVWLLKQPRVPNNFLGYYSEIRGAQILKNIKSIAEAQKSSQLASRSKLSTAVRKPVQRSEKVDVLIDLDACHAMCSALLSLLELEEKLMVKAIPDTSKRAQVFRELVSRPLAYAVVQTQKVVNEKDIGIVPLLPLLHLLSQNYARFHNLATNSIGDVQFDSLMRQLQVKCSSYVNEVIENLNEDTTKFVPPDGNVHPTTASTLNFLSSLTAHRVTVTQHVLALTAPQGSNTNLLLPKLFARILSALGSMLKKKANLYDDPTLATIFLLNNYNYIAKTLADEQDGLLPAITEMNSNILSFYHEEIATCTNEYLKSWNGIASILKSVDRIGEDKQMAKQIMSTFVRDFDQVLAQQMDYCISDPKISANVQTQVKSRIWKNYSQLLDTCQRLHVFPQGIKYTENTFEMAIRNLFSSARIN
Protein: Flap endonuclease GEN-like 1 (AtGEN1) (XPG-like endonuclease 1) (EC 3.1.-.-) (Q9LPD2)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Endonuclease which cleaves flap structures at the junction between single-stranded DNA and double-stranded DNA with a specific cleavage site in the 5' overhang strand exactly one nucleotide 3' of the branch point. Structure- and sequence-specific nuclease that resolves holliday junctions (HJs) by symmetrically oriented incisions in two opposing strands near the junction point, thus leading to ligatable products; HJs are physical links between homologous DNA molecules that arise as central intermediary structures during homologous recombination and repair in meiotic and somatic cells. Structure-specific nuclease with 5'-flap endonuclease activity, preferentially cleaving static flaps 5' overhang strand exactly one nucleotide in the 3' direction of the branch point. Also able to cleave double-stranded flap strand 1 exactly at the branch point.
Subcellular location: Nucleus {ECO:0000250|UniProtKB:Q17RS7}.
Interaction partners:
- Crossover junction endonuclease MUS81
- Proliferating cell nuclear antigen 2
- DNA ligase 6
- Proliferating cellular nuclear antigen 1
- DNA polymerase delta catalytic subunit
- Serine/threonine-protein kinase ATG1t
- DNA mismatch repair protein MLH1
- DNA replication ATP-dependent helicase/nuclease JHS1
- DNA polymerase delta small subunit
- DNA mismatch repair protein MLH3
Sequence:
MGVGGNFWDLLRPYAQQQGFDFLRNKRVAVDLSFWIVQHETAVKGFVLKPHLRLTFFRTINLFSKFGAYPVFVVDGTPSPLKSQARISRFFRSSGIDTCNLPVIKDGVSVERNKLFSEWVRECVELLELLGIPVLKANGEAEALCAQLNSQGFVDACITPDSDAFLFGAMCVIKDIKPNSREPFECYHMSHIESGLGLKRKHLIAISLLVGNDYDSGGVLGIGVDKALRIVREFSEDQVLERLQDIGNGLQPAVPGGIKSGDDGEEFRSEMKKRSPHCSRCGHLGSKRTHFKSSCEHCGCDSGCIKKPLGFRCECSFCSKDRDLREQKKTNDWWIKVCDKIALAPEFPNRKIIELYLSDGLMTGDGSSMSWGTPDTGMLVDLMVFKLHWDPSYVRKMLLPMLSTIYLREKARNNTGYALLCDQYEFHSIKCIKTRYGHQSFVIRWRKPKSTSGYSHSHSEPEESIVVLEEEEESVDPLDGLNEPQVQNDNGDCFLLTDECIGLVQSAFPDETEHFLHEKKLRESKKKNVSEEETATPRATTMGVQRSITDFYRSAKKAAAGQSIETGGSSKASAEKKRQATSTSSSNLTKSVRRRLLFG
Protein: Uncharacterized protein C24H6.08 (Q09762)
Organism: Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Interaction partners:
Sequence:
MTSHQTGKIEVHWNDPSSGIFLSQTQRTSSTSSLKKSASSRRLVYGDDMLAPKPLAGQVLSKSPLPPFSPSKIMNRSISVPPTNISVPQISSNPLNLMKKSSDNDIFTTFNDTTNDCMNEASCEDVRHSLLQIIESKSNLSDSVHKMLGERVKTNLLLQGQLENMEGFWLQKLSQTCRLALTGNISEAKAFIVEIMCAGVVTNCVRWCPVLKTLIENLAI
Protein: THAP domain-containing protein 10 (Q9P2Z0)
Organism: Homo sapiens (Human)
Interaction partners:
- THAP domain-containing protein 8
Sequence:
MPARCVAAHCGNTTKSGKSLFRFPKDRAVRLLWDRFVRGCRADWYGGNDRSVICSDHFAPACFDVSSVIQKNLRFSQRLRLVAGAVPTLHRVPAPAPKRGEEGDQAGRLDTRGELQAARHSEAAPGPVSCTRPRAGKQAAASQITCENELVQTQPHADNPSNTVTSVPTHCEEGPVHKSTQISLKRPRHRSVGIQAKVKAFGKRLCNATTQTEELWSRTSSLFDIYSSDSETDTDWDIKSEQSDLSYMAVQVKEETC