wanglab/gogpt-training-data huggingface dataset:
Protein: Protein transport protein SEC23 (Q7ZVV7)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Subcellular location: Cytoplasmic vesicle, COPII-coated vesicle membrane {ECO:0000256|RuleBase:RU365030}; Peripheral membrane protein {ECO:0000256|RuleBase:RU365030}; Cytoplasmic side {ECO:0000256|RuleBase:RU365030}. Endoplasmic reticulum membrane {ECO:0000256|ARBA:ARBA00004397, ECO:0000256|RuleBase:RU365030}; Peripheral membrane protein {ECO:0000256|ARBA:ARBA00004397, ECO:0000256|RuleBase:RU365030}; Cytoplasmic side {ECO:0000256|ARBA:ARBA00004397, ECO:0000256|RuleBase:RU365030}. Cytoplasm, cytosol {ECO:0000256|RuleBase:RU365030}.
Interaction partners:
Sequence:
MATYQEFIQQNEDRDGIRCSWNLWPSSRLEATRLVVPVSCLYTPLKERPDLPPVQYEPVPCTRANCKAVLNPLCQVDFRAKIWACNFCFQRNSFPPSYAGISEVNQPAELMPQFSTIEYIVQRGPPTPLIFLYLVDTCLEEEDLQALKESLQMSLSLLPPNALVGLITFGRMIQVHELSCEGIAKSYVFRGTKELAPKQIQEMLGLMKPATSGQQGKPLAPHDAAASCRFLQPVQMVDMNLTDLLGELQRDPWPVPQGKRPLRSTGIALSIAVGLLEGTFPNTGARVMLFTGGPPTQGPGMVVGDELKTPIRSWHDIQKDNARHLKKATKYYEALANRAAVNGHSVDIYACALDQTGLLEMKCLSNLTGGHIVMGDSFNTSLFKQTFQRVFNKDYNGEFRMAFGATLEVKTSRELKVSGAIGPCVSLNTKGPCVSDSEMGVGGTCQWKICSLSPATTLAMYFEVVNQHNAPVPQGGRGVVQFVTQYQHSNTQRRIRVTTIARNWADAQSQIQHIESSFDQEASAVLMARLGVFRAESEEGPDVLRWLDRQLIRLCQKFGQFNKDDPNSFRLSESLSLYPQFMFHLRRSPFLQVFNNSPDESSYYRHHFVRQDLTQSLIMIQPILYSYSFHGPPEPVLLDSSSILPDRILLMDTFFQLVIYHGETIAQWRKAGYQEMAEYENFKQLLQAPLDDAQEILQTRFPMPRYIDTEHGGSQARFLLSKVNPSQTHNNLYAWGQESGAPILTDDVSLQVFMDHLKKLAVSSSA
Protein: Chromatin structure-remodeling complex protein RSC14 (Low dye-binding protein 7) (Remodel the structure of chromatin complex subunit 14) (P38210)
Organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Function: Component of the chromatin structure-remodeling complex (RSC), which is involved in transcription regulation and nucleosome positioning. RSC is responsible for the transfer of a histone octamer from a nucleosome core particle to naked DNA. The reaction requires ATP and involves an activated RSC-nucleosome intermediate. Remodeling reaction also involves DNA translocation, DNA twist and conformational change. As a reconfigurer of centromeric and flanking nucleosomes, RSC complex is required both for proper kinetochore function in chromosome segregation and, via a PKC1-dependent signaling pathway, for organization of the cellular cytoskeleton. Together with HTL1, NPL6, RSC3, RSC30 components, defines a fungal-specific module within the RSC complex that plays a role in many cellular functions including the maintenance of cell wall integrity. May be involved in the transfer of mannosylphosphate (MP) groups into N-linked oligosaccharides.
Subcellular location: Nucleus.
Interaction partners:
- Chromatin structure-remodeling complex subunit RSC7
- Chromatin structure-remodeling complex subunit RSC4
- High temperature lethal protein 1
- Nuclear protein STH1/NPS1
- Chromatin structure-remodeling complex protein RSC8
- Chromatin structure-remodeling complex protein RSC58
- Regulator of Ty1 transposition protein 102
- Chromatin structure-remodeling complex protein RSC3
- Chromatin structure-remodeling complex protein RSC30
- Chromatin structure-remodeling complex subunit RSC2
Sequence:
MSGSNMGYYDVLAGLSALEKSSQVVFSATELQQLTQQSHATDKGIEGSENSKAKVSKPKRVAVHGYLGGKVSLADAAQVEYEVGHSLLGSYVPRQQLEALSSVDFSHHFHRTLECKAALETHDVFLAGAGQLSLPFQSHIESPRNSEAKRKRKVIICKRCQSRFIGSHRRSQLREHACVD
Protein: Aldehyde dehydrogenase [NAD(P)+] 1 (EC 1.2.1.3) (P47771)
Organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Function: Cytoplasmic aldehyde dehydrogenase involved in ethanol oxidation. Required for pantothenic acid production through the conversion of 3-aminopropanal to beta-alanine, an intermediate in pantothenic acid (vitamin B5) and coenzyme A (CoA) biosynthesis.
Subcellular location: Cytoplasm {ECO:0000269|PubMed:11914276}.
Interaction partners:
- Acetyl-coenzyme A synthetase 1
- Acetyl-coenzyme A synthetase 2
- Polyamine oxidase FMS1
- 4-aminobutyrate aminotransferase
- NADP-dependent alcohol dehydrogenase 6
- Acetyl-CoA hydrolase
- Glutamate decarboxylase
- Alcohol dehydrogenase 4
- NADP-dependent alcohol dehydrogenase 7
- Pantoate--beta-alanine ligase
Sequence:
MPTLYTDIEIPQLKISLKQPLGLFINNEFCPSSDGKTIETVNPATGEPITSFQAANEKDVDKAVKAARAAFDNVWSKTSSEQRGIYLSNLLKLIEEEQDTLAALETLDAGKPYHSNAKGDLAQILQLTRYFAGSADKFDKGATIPLTFNKFAYTLKVPFGVVAQIVPWNYPLAMACWKLQGALAAGNTVIIKPAENTSLSLLYFATLIKKAGFPPGVVNIVPGYGSLVGQALASHMDIDKISFTGSTKVGGFVLEASGQSNLKDVTLECGGKSPALVFEDADLDKAIDWIAAGIFYNSGQNCTANSRVYVQSSIYDKFVEKFKETAKKEWDVAGKFDPFDEKCIVGPVISSTQYDRIKSYIERGKREEKLDMFQTSEFPIGGAKGYFIPPTIFTDVPQTSKLLQDEIFGPVVVVSKFTNYDDALKLANDTCYGLASAVFTKDVKKAHMFARDIKAGTVWINSSNDEDVTVPFGGFKMSGIGRELGQSGVDTYLQTKAVHINLSLDN
Protein: Defective proboscis extension response 12, isoform C (IP17045p) (A1Z6H9)
Organism: Drosophila melanogaster (Fruit fly)
Interaction partners:
- Dpr-interacting protein delta, isoform D
- Sidestep VI, isoform B
- Common Dpr-interacting protein
Sequence:
MPMVPPRLLLRLRRPLHLMELRILLLCLPTLLLATTLEPDQKSILTDNDWKKLWMRGGINGDSKLDNNLDSSDSPMFEDSELMAHNTTVQLGGTAFLVCKVSGVDRVGVNWNQISWIRRRDWHILSSGAQLYTNDERFAILHTPGSNMWTLQIKFVQRRDHGMYECQVSTPTGIISHFVNLQVVVPEAFILGSGELHVDMGSTINLVCIIEKSPTPPQYVYWQKNDRLINYVDSRRDITIETTPGPRTQSRLIIREPQVTDSGNYTCSASNTEPASIYVFVSKGDNMAAISRRKTSSADRLTHIFRSMLAPCLLLNTVVVRHIFLT
Protein: Altered inheritance of mitochondria protein 34, mitochondrial (Q03673)
Organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Subcellular location: Mitochondrion membrane {ECO:0000269|PubMed:14562095}; Single-pass membrane protein {ECO:0000269|PubMed:14562095}.
Interaction partners:
- Cytochrome c oxidase subunit 2
- Cytochrome c oxidase subunit 3
- Cytochrome b-c1 complex subunit Rieske, mitochondrial
- Cytochrome c1, heme protein, mitochondrial
- Bud site selection protein 22
- Cytochrome c oxidase subunit 4, mitochondrial
- Cytochrome c oxidase subunit 6, mitochondrial
- Cytochrome c oxidase subunit 8, mitochondrial
- Cytochrome b
- Cytochrome b mRNA maturase bI3
Sequence:
MSISLLGRIVSQQFSGIRAAEPGRSLYLPFTLLLKQPGAYKVSLHRYVHSTQTKSHLSFLMNNNDITPFQKFTVKVLKEQCKSRGLKLSGRKSDLLQRLITHDSCSNKKSSVKINEPKKKRILINDPIKITKKLVSDKTFRTIEKNISSLQNTPVIETPCDVHSHLQPRDRIFLLGFFMLSCLWWNLEPQESKPTIDH
Protein: Alpha-mannosidase I MNS4 (EC 3.2.1.-) (Q9FG93)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Can convert Man(9)GlcNAc(2) and Man(8)GlcNAc(2) into N-glycans with a terminal alpha-1,6-linked Man residue in the C-branch. Functions in the formation of unique N-glycan structures that are specifically recognized by components of the endoplasmic reticulum-associated degradation (ERAD) machinery, which leads to the degradation of misfolded glycoproteins. Most likely generates N-glycan signal on misfolded glycoproteins that is subsequently recognized by OS9. Required for ERAD of the heavily glycosylated and misfolded BRI1 variants BRI1-5 and BRI1-9. Does not seem to play role in N-glycan processing of correctly folded proteins destined for secretion.
Subcellular location: Endoplasmic reticulum membrane {ECO:0000269|PubMed:24737672}; Single-pass type II membrane protein {ECO:0000305}.
Interaction partners:
- Protein OS-9 homolog
- Alpha-mannosidase I MNS5
- UDP-glucose:glycoprotein glucosyltransferase
- Calnexin homolog 1
- ERAD-associated E3 ubiquitin-protein ligase component HRD3B
- Calnexin homolog 2
- Calreticulin-1
- Dol-P-Man:Man
- Alpha-1,2-mannosyltransferase ALG9
- Dol-P-Man:Man
Sequence:
MDSNFKWLLFAILISLTFSGFVLHHGVLAESVKPDEAKQLRDEVRGMFYHAFDGYMNNAFPLDELRPLSCQGEDTLGGYALTLIDSLDTLALLGDRERFTSSVEWIGKNLQFNINKTVSVFETTIRVLGGLLSAHLIASDYATGMRIPSYNNELLVLAENLARRMLPAFDTPTGIPFGSVNLMYGVDKHESKITSTAGGGTLSLEFGVLSRLTNDPVFEQVAKNAVRGLWARRSNLDLVGAHINVFTGEWTQKDAGIGTSIDSFYEYLLKAYILFGDEEYLYIFQEAYRSAMQYLHKDPWYVEVNMDSAAIVWPVFNSLQAFWPGLQVLAGDVDPAIRTHTAFFSVWKRYGFTPEGFNLATLSVQYGQKSYPLRPELIESTYWLYKATRDPRYLDAGRDFVASLQYGAKCPCGYCHITDVELHKQEDHMESFFLAETVKYLWLLFDLAVDSDNLVDNGPYKYIFSTEGHLLPITPQISLAREHCSYFGGYCPSNSTKLEQEVLGEDSSNDDHSNDYPYHESFPVTGLIKGLCPGLTHAQKYGFSYVLPEKTDREDVNQPKPVVTSSSIVLISDQTVEKRPQEEEGFTSQSEPIMTISGGSSNDQTGQELTLLESETDDQRSYSS
Protein: Carboxypeptidase Y-deficient protein 8 (Vacuolar protein sorting-associated protein 26) (Vacuolar protein-targeting protein 4) (P40335)
Organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Function: Plays a role in vesicular protein sorting. Required for the endosome-to-Golgi retrieval of the vacuolar protein sorting receptor VPS10. Component of the membrane-associated retromer complex which is essential in endosome-to-Golgi retrograde transport. The VPS29-VPS26-VPS35 subcomplex may be involved in cargo selection.
Interaction partners:
- Sorting nexin-3
- Vacuolar protein sorting-associated protein 29
- Vacuolar protein sorting-associated protein 5
- Vacuolar protein sorting-associated protein 35
- Vacuolar protein sorting-associated protein 17
- Vacuolar protein sorting/targeting protein VPS10
- Uncharacterized protein YKR078W
- Sorting nexin-4
- Ypt/Rab-type GTPase YPT7
- GTPase-activating protein GYP6
Sequence:
MSIFFKPPIDIEILFDNEESRKHVDIATRSSNSSYKSMKESLPVYEDGESLGGIVTLRVRDSKKVDHLGIKVSVIGSIDMLKSHGSGNSSSKKVTSSTSSSSSNGSVDVRKNSVDQFLCQSYDLCPAGELQHSQSFPFLFRDLSKRYESYKGKNVDVAYYVKVTVMRKSTDISKIKRFWVYLYNSVTTAPNTLSANETKATTNDIAGGNYAADNASDNTQTKSTQGEAADVNQVLPISHSNNEPKPVRLDIGIENCLHIEFEYAKSQYSLKEVIVGRIYFLLTRLRIKHMELSLITRESSGLQTSNVMTDSTAIRYEIMDGSSVKGETIPIRLFLSGYDLTPNMSCNYFNVKNYLSLVIIDEDGRRYFKQSEITLYRTR
Protein: Serpin I2 (Serine protease inhibitor 14) (Q9JK88)
Organism: Mus musculus (Mouse)
Subcellular location: Secreted {ECO:0000305}.
Interaction partners:
- WD repeat domain 49
- Phospholipase A2
Sequence:
MNKTILWSFLLFFSGSQTSRATDQKIADFAVDLYKAISLSHKNNIIFSPLGTTMLLGMVQLGAKGKAQQQILKTLRMRGTPAGEEFSVLKSLFSAISKKKQEFTFNLASALYLQEGFIVKETYLHSNKEFFQSATKLVDFLDAKTSAQAISTWVESKTDGKIKNMFSEEEFGPLTRLVLVNAIYFKGDWKQKFRKEDTEMTDFTKKDGSTVKVPMMKALLRAQYGYFSQSSMTCQVLELPYKADEFSLVIILPTEDTSIEEVENQVTAPHVRRWFSELHEEEVEVSLPRFKIEQKLDLKEALYSLNVTEIFSGGCDLSGITDSSEVYVSRVMQKVFFEINEDGSEAAASTGINIPAIMSLTQTQFLANHPFLFILKHIRTESILFMGKVTDPDIQTTKGRDLDSL
Protein: Ferredoxin--NADP reductase (FNR) (EC 1.18.1.2) (P21890)
Organism: Nostoc sp. (strain ATCC 29151 / PCC 7119) (Anabaena sp.)
Subcellular location: Cellular thylakoid membrane; Peripheral membrane protein; Cytoplasmic side. Note=May be bound to the thylakoid membrane or anchored to the thylakoid-bound phycobilisomes.
Interaction partners:
Sequence:
MSNQGAFDGAANVESGSRVFVYEVVGMRQNEETDQTNYPIRKSGSVFIRVPYNRMNQEMQRITRLGGKIVTIQTVSALQQLNGRTTIATVTDASSEIAKSEGNGKATPVKTDSGAKAFAKPPAEEQLKKKDNKGNTMTQAKAKHADVPVNLYRPNAPFIGKVISNEPLVKEGGIGIVQHIKFDLTGGNLKYIEGQSIGIIPPGVDKNGKPEKLRLYSIASTRHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEVKITGPVGKEMLLPDDPEANVIMLATGTGIAPMRTYLWRMFKDAERAANPEYQFKGFSWLVFGVPTTPNILYKEELEEIQQKYPDNFRLTYAISREQKNPQGGRMYIQDRVAEHADELWQLIKNQKTHTYICGLRGMEEGIDAALSAAAAKEGVTWSDYQKDLKKAGRWHVETY
Protein: exodeoxyribonuclease III (EC 3.1.11.2) (Q5TZT0)
Organism: Homo sapiens (Human)
Interaction partners:
Sequence:
MQTLIFFDMEATGLPFSQPKVTELCLLAVHRCALESPPTSQGPPPTVPPPPRVVDKLSLCVAPGKACSPAASEITGLSTAVLAAHGRQCFDDNLANLLLAFLRRQPQPWCLVAHNGDRYDFPLLQAELAMLGLTSALDGAFCVDSITALKALERASSPSEHGPRKSYSLGSIYTRLYGQSPPDSHTAEGDVLALLSICQWRPQALLRWVDAHARPFGTIRPMYGVTASARTKPRPSAVTTTAHLATTRNTSPSLGESRGTKDLPPVKDPGALSREGLLAPLGLLAILTLAVATLYGLSLATPGE
Protein: Shattered (Q9VXV3)
Organism: Drosophila melanogaster (Fruit fly)
Interaction partners:
- Cell division cycle protein 27 homolog
- Cell division cycle 16
- Anaphase-promoting complex subunit 2
- Anaphase-promoting complex subunit 5
- Anaphase-promoting complex subunit 4
- Anaphase-promoting complex subunit 10
- Cyclosome subunit 8
- Fizzy-related protein homolog
- Anaphase promoting complex subunit 7, isoform A
- Cell division cycle protein 20 homolog
Sequence:
MIAVAEPPLEFVPRGRQTSAEHPGPHDQPMARHQLPTTEHLLLQRLQNVNISSAGEDCPSGGQESWTVRELYDDYEASEERAALRRKLTERTKRCGLQATSLPNRLLNPPLVRRVEPMCDYMVNNEEELYVNRNTVVWTQGVNDDDDTDNGVYRRMCFTTDTPVRFACFLNRSFVRGRLAQLKAAVHPDDDHLTAICVMDQDALRVYCSNGEDFLANLDFPVSQLWQTKYGLLLEKDSSNALISHMSIPMPRLFSMSHPLHEACPVVLKTATGSTGYMTEPEYTVVFTTEESDLVMLYDAKFFKHFVARLRKVTPEEINYVSQQMELGQTLMGPRSMAGNSFSSTKQTGATPKATNLSFAARNINTTTTGMGNQFGLSQSQSFSGVLGQSNRASLGTPLSQLQSSISQQSMSVKDMRKLTHVKPAKPIEPELCMEHIWTENIYGTQREFCEMATRAFIHTDLVGQTFLCYLLARSCRLQLVRLTGYGRGEVQLSTHASTLAAKDAVGLKRMHMIAVLDPSGSLLLYTGTVLISKVHITPFLAPTSIPTPLVTPMTAAPSPSASPAPSHVKTPMAAAGPASGIPSGSSSFVEVRRSSLLPTKAPGDVAAFEEELHMLSPIQPQPVSYTQRQAHNVCKSLRDPAGNRLTLVYATGRMLRIALPFLNDTRLLTRCVATLRQVLSPTQFLDFVIRWYSDRNPPGSRNYSIEQEWLLFRSTLLALMGLTAAPDVDAGENYARCATPPLHTQFGGGATATESSDGSSCSSNSTLGGQDEPKKRRIYNDCDDFTDDDWEFLLLQTTLAPCGADGHSYSVNIGALLFRMIPAIFFSLHLLYEDLKLDADFYGALPYLATFLHQLAIDMQLESYVLHYILDFPELSNRTGKLSLLGAEHGAMMLHQELLRVPAPSVFAQLEHIIVGEEEVMPYTFLECVNERSRILLQLVSLVTHGHERLNYWWQLLEIPGAVQANFTRRSKRNITADAPRSHQMLQLLLAMRLTRRDIERFPAAVHLIVAEALEEARLSPPMGCSMATYELILRPELAAHAQLPFLETSTGQPHCGRVYKEDSLSARCPPTGGSETDSPAQLRRDDMDNMDTKLLRLRFPDDMRVDEVRRLLNSSEPVVIEVQQAPGTSDHEFIEEQEKQLFALCSRTMTLPVGRGMFTLRTMLPRPSESLTMPKLCLLGKEPLKGTTIEMQQIEFPANMQMWPSFHNGVATGLKISPQAQDIDSNWIVYNKPKTHSHNALEHAGFLMALGLNGHLKTLSFMSVYKYLVKCDEMTNVGLLLGISAAHRGTMDTKTTKLLSVHLEALLPATAMELDIPQSTQVAAIMGVGLLYQGSAKRHIAEVLLQEIGRPPGPEMENSIERESYAMTAGLSLGLVTLGQGESPAGLRDLQLPDTLHYYMVGGVKRPIGGSQKEKYRLASFQVREGDTVNIDVTAPGATLALGLMFFNSGNAAIAEWMQPPDSRYLLDMVRPDFLLLRTISRGLILWQDVRPDNAWFQAQFPRALRAHLKLPFYENEYAPEDYDVDYEAISQAYCNIMAGAAFCIGLKYAGTENLVAFATLRSVIKDFLRFPSRPMGECAGRTTVESCLMVLLISISLVFAGSGNCEILRIIRFLRSRVGPQYPHITYGSHMAIHMSLGLLFLGAGRFTISQTPESIAALVCAFFPKFPIHSNDNRYHLQALRHLYVLAVEPRLFLPRDIDTNKLCLANISVLEVGATELRRLPIAPCILPVLSTLQQVVVDDENYWPVCFERSRNWDQLEKALEMSAPIDIKKRTGCLSHLEDPDRLKSMLAQTLTMEQSICWQIDMNDLQQFASERMVKQFLSRCLDTKGTDLSPPELMKRHQVMLLFYNAVVKDRMHFLPVYLTLYDHVTKSMPNNIDVWQMKLIDAYLSRSQESEHPLISVELIQMMQELFKQEMEDSTRELCLPLREFLSRRRLDPSYVTTVSGPDLQRAFCVINYYNLLPNMLNGVDLSTGTVNYMRLLYEFRRLNLGAHTIFGLMKILQSLATEVVTLDEAALLAYTMGDQ
Protein: Metastasis associated 1-like, isoform A (Q9VNF6)
Organism: Drosophila melanogaster (Fruit fly)
Subcellular location: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
Interaction partners:
Sequence:
MATNMYRVGDYVYVETTPNSPYLIRRIEELNKNQTGNVEAKVMCFYRRRDLPNPLVQLADKHQLATAEDSPLATKLKKTWLRTPVSEEQAAQAVLDPSIAALDEERTSPTQTSGGGGSATGNSGSNSSGTSNNNSSSTAIGGGAGGSGGAGGDAEKGEALTSKQRYQIKHRELFLSRQVESIPATQIRGKCSVTLLNETESLQSYLNKDDTFFYCLVFDPNQKTLLADKGEIRVGSRYQCDIPAKLKDTATDDRKLEELESLVWTPEHSLTDRKIDQFLVVSRSIGTFARALDCSSSVKQPSLHMSAAAASRDITLFHAMNILHKHEYSIEESMSSLVPSTGPVLCRDEIEDWSASEANLFEEALEKYGKDFNDIRQDFLPWKTLKQIIEYYYMWKTTDRYVQQKRVKAVEAELKLKQVYIPQYNNNGKGNGTSTKAGGGIYNGTTNGSTDLSSNGKPCESCGTTKSSQWNSVSSGHSTSRLCLSCWEYWRRYGSMKSATKGDAGEGDAKKKSSSAASTPTATLAGLATTPTAVVDLNDDEKISDLTNRQLHRCSIVNCGKEFKLKTHLARHYAQAHGIAISSGSPRPIMKTRTAFYLHTNPMTRVARAICRSIVKPKKAARQSAYAINAMLVKQEFTNRISGKSQAEIKKLLLLKPKDRGSVTKIANRLGAPGSGPHEWLVLTPKDKMPLPAVVSFPKPPKAPDGSLVYDRVPNKSPDVVAVPADKELTIIPTQATSTIRKRAHEDQQLNGTEVTIVPSGPPAKRPNKDPMPSHCPSPEQFAAMMAASGQPLSRHHLNGKQKIAQMARGGNGRKQVISWMDAPDDVYFRANDTHKKTRKILSAVDLRRAARKPWRTLPIKPAAPEPSSRPIESQIVILD
Protein: Sp1 transcription factor (H3BVI2)
Organism: Homo sapiens (Human)
Interaction partners:
Sequence:
MDEMTAVVKIEKGVGGNNGGNGNGGGAFSQARSSSTGSSSSTGGGGQESQPSPLALLAATCSRIESPNENSNNSQGPSQSGGTGELDLTATQLSQGANGWQIISSSSGATPTSKEQSGSSTNGSNGSESSKNRTVSGGQYVVAAAPNLQNQQVLTGLPGVMPNIQYQVIPQFQTVDGQQLQFAATGAQVQQDGSGQIQIIPGANQQIITNRGSGGNIIAAMPNLLQQAVP
Protein: COP9 signalosome complex subunit 6 (Signalosome subunit 6) (Q5BB47)
Organism: Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) (Aspergillus nidulans)
Function: Component of the COP9 signalosome (CSN) complex that acts as an regulator of the ubiquitin (Ubl) conjugation pathway by mediating the deneddylation of the cullin subunit of SCF-type E3 ubiquitin-protein ligase complexes (By similarity). The CSN complex seems to link protein degradation to sexual development.
Subcellular location: Cytoplasm {ECO:0000250}. Nucleus {ECO:0000250}.
Interaction partners:
- COP9 signalosome complex subunit 3
- COP9 signalosome complex subunit 7
- COP9 signalosome complex subunit 1
- COP9 signalosome complex subunit 4
- COP9 signalosome complex subunit 5
- COP9 signalosome complex subunit 2
- Ubiquitin-like domain-containing protein
- Uncharacterized protein
- Ubiquitin ligase subunit CulD, putative
- Proteasome regulatory particle subunit
Sequence:
MPDEAISILSQKSSDSGLHIQLHPLALLTISDHITRHAARSQQGPIVGGLLGQHNGREITVEHGFECVVEIGPNGEAQLPNEWFVDRVKQFKDVHKVPALDLIGWWSTAPPSGPTTAHLPIHRQILQNHNESAVFLTFHPSQVQGASQSQGKLPLTIYESVYEGESVTENGKAMQVDGEEQLLNIRFRELPYTIETGEAEMIGIDTVARTARNAAATETSTVAAPSSQIDSDKQEQQPANTDLLSPEEEELIASLNTRLNAIRTLESRISLIKSYLSSISPSSEEGQKDSATKPDHTILRDINSLLSNLSLLTPHEQSAFSAETLAQNNDVSLVALLGQLSQSVNGMREVGKRTAIVNSVRRNRKQLGAQSRYEDDILGRDGVALG
Protein: Dynein light chain Tctex-type 3 (Protein 91/23) (T-complex-associated testis-expressed 1-like) (P56387)
Organism: Mus musculus (Mouse)
Function: Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. Probably binds BUB3 as part of transport cargo. Required for the efficient progression through mitosis.
Subcellular location: Nucleus {ECO:0000250}. Cytoplasm, cytoskeleton {ECO:0000250}. Chromosome, centromere, kinetochore {ECO:0000250}.
Interaction partners:
- Cytoplasmic dynein 1 light intermediate chain 1
- Dynein light chain roadblock-type 2
- Dynein light chain 2, cytoplasmic
- Dynein light chain roadblock-type 1
- Cytoplasmic dynein 1 intermediate chain 1
- Cytoplasmic dynein 1 heavy chain 1
- Dynein light chain 1, cytoplasmic
- Dynein light chain Tctex-type protein 2B
- Dynein light chain
- Cytoplasmic dynein 1 intermediate chain 2
Sequence:
MEGYQRPCDEVGFNADEAHNIVKECVDGVLGGNDYNENNINQWTASIVEQSITHLVKLGKAYKYIVTCAVVQRSPYGFHTASSCFWDTTSDGTCTIRWENRTMNCIVNVFAVAIVL
Protein: HIG1 domain family member 2A, mitochondrial (RCF1 homolog B) (RCF1b) (Q9BW72)
Organism: Homo sapiens (Human)
Function: Proposed subunit of cytochrome c oxidase (COX, complex IV), which is the terminal component of the mitochondrial respiratory chain that catalyzes the reduction of oxygen to water. May be involved in cytochrome c oxidase activity. May play a role in the assembly of respiratory supercomplexes.
Subcellular location: Mitochondrion membrane {ECO:0000255|PROSITE-ProRule:PRU00836, ECO:0000269|PubMed:22342701}; Multi-pass membrane protein {ECO:0000255|PROSITE-ProRule:PRU00836, ECO:0000269|PubMed:22342701}. Mitochondrion inner membrane {ECO:0000305|PubMed:22342701}.
Interaction partners:
- Cytochrome c oxidase subunit 5B, mitochondrial
- Mitochondrial import receptor subunit TOM6 homolog
- Cytochrome c oxidase subunit 6A1, mitochondrial
- Cytochrome c oxidase assembly protein COX14
- Cytochrome c oxidase subunit 6A2, mitochondrial
- Cytochrome c oxidase subunit 3
- Cytochrome c oxidase subunit 2
Sequence:
MATPGPVIPEVPFEPSKPPVIEGLSPTVYRNPESFKEKFVRKTRENPVVPIGCLATAAALTYGLYSFHRGNSQRSQLMMRTRIAAQGFTVAAILLGLAVTAMKSRP
Protein: MHC class II lymphocyte antigen beta chain (Q30059)
Organism: Homo sapiens (Human)
Subcellular location: Endosome membrane {ECO:0000256|ARBA:ARBA00004530}; Single-pass type I membrane protein {ECO:0000256|ARBA:ARBA00004530}. Lysosome membrane {ECO:0000256|ARBA:ARBA00004352}; Single-pass type I membrane protein {ECO:0000256|ARBA:ARBA00004352}.
Interaction partners:
Sequence:
MMVLQVSAAPRTVALTALLMVLLTSVVQGRATPENYVYQGRQECYAFNGTQRFLERYIYNREEYARFDSDVGEFRAVTELGRPAAEYWNSQKDILEEKRAVPDRVCRHNYELDEAVTLQRRVQPKVNVSPSKKGPLQHHNLLVCHVTDFYPGSIQVRWFLNGQEETAGVVSTNLIRNGDWTIQILVMLEMTPQQGDVYICQVEHTSLDSSVTVEWKAQSDSAQSKTLTGAGGFVLGLIICGVGLFMHRRSKKVQRGSA
Protein: Transportin (O76331)
Organism: Drosophila melanogaster (Fruit fly)
Subcellular location: Cytoplasm {ECO:0000256|ARBA:ARBA00004496}.
Interaction partners:
Sequence:
MTWEPQGEGLQQIIAILKESQSPDTATQMAVQMKLEEFNRYPDFNNYLIYVLTKLKTEDEPTRSLSGLILKNNIRMHGTTLQPEIVEYIKHECLQAVGDSSPLIRATVGILITTIASNGGLHNWPQLLPSLCEMLDNQDYNVCEGAFSALQKICEDSAEILDSAALNRPLNIMIPKFLEYFKHSSPKIRSHAIACINQFIINRSQALMLNIDSFIENLFHLSSDEDHEVRKNVCHGLVMLLKVRMDRLMPHMSQIIEYMLLRTQDTDEGVALEASEFWLSLAEQSICKDVLAPYLAQLAPVLVRGMRYSEVDIILLKGNVEEDDMVPDREEDIRPRFHKSRAHTIRSTQEGGAGATGDDDDDEFEDGMDDDSSLSEWNLRKCSAAALDVLANVFREDCLPIVLPILKETLFHQEWVIKESGVLALGAIAEGCMQGMIQHLPELIPYLISCLSDKKALVRSITCWTLSRYANWVVNQPHDQYLKPLMEELLKRILDSNKRVQEAACSAFATLEEEACTELVPYLEYILKTLVFAFSKYQHKNLLILYDAVGSLADSVGHHLNKPQYIDILMLPIIDKWNLLKDDDKDLFPLLECLSSIATALQSGFLPYCDPVYRRCISLIEQTINQEMLCKQNQTYDHPDKERMIVALDLLSGLAEGLDRHIETLVANSNIMHLLYQCMQDVLPEVRQSSFALLGDLTKACFPHVHPFMADFFPILGQNLNPDFISVCNNATWAIGEICMKLGEETKQYIRLVLSDLFIIINRPNTPKTLLENTAITIGRLGYVCPVEVAPYLPEFVRQWCTSLRHIRDNDEKDSAFRGMCHMITVNPAGVVADFIFFCDAIASWVNPPEDLHQMIQKILHGFKTQVGEENWCRFVEQFPPTLAERLTTMYNI
Protein: Major tail protein (Q7Y3F0)
Organism: Streptococcus phage C1
Interaction partners:
Sequence:
MTLSKIKLFYNTPFNNMQNTLHFNSNEERDAYFNSKFDVHEFTSTFNYRNMKGVLRVTIDLVSDRSCFEQLMGVNYCQVQYIQSNRVEYLFVTDIQQLNDKVCELSLVPDVVMTYTQGNVLNTLNNVNVIRQHYTQTEYEQNLEQIRSNNDVLATSTMRVHAIKSELFTQLEYILTIGANLRKSFGTAEKPKFPSSSGSTHDGIYNPYDMYWFNDYESLKEVMDYLTGYPWIQQSIKNVTIIPSGFIKQESLNDHEPVNGGDLSVRKLGKQGVSNQKDFNAISLDYQSLMFTLGLNPINDKHLLRPNIVTAELTDYAGNRLPIDLSLIETNLEFDSFVTMGAKNEIKVYVKNYNARGNNVGQYIDNALTINNFDTIGFSVDSGELGKANSAYSRELSNSRQMSSRINTVLDNDASVKDRLFNAISLSGGLSIKSALSGFNNEYEHYRDQKAQFKQMDALPNAITEGHVGYAPLFKQDKFGVHLRLGRISQDELNNVKKYYNMFGYECNDYSTKLSDITSMSICNWVQFKGIWTLPNVDTGHMNMLRALFEAGVRLWHKESDMINNTVVNNVIIK
Protein: Growth hormone releasing hormone receptor a precursor (PACAP-related peptide receptor) (B4XV21)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Subcellular location: Cell membrane {ECO:0000256|ARBA:ARBA00004651}; Multi-pass membrane protein {ECO:0000256|ARBA:ARBA00004651}.
Interaction partners:
Sequence:
MTVVHLCLFAGFWRAMHAIHPDCAIISQLIQDQETCIQTRKREIKNHSQQTGCGTDWDGIRCWHTANTGQLINVSCSDVFQHISNTQGFIYRNCVSNGWTDPYPPYEEACAFEDDSESGTVTTYLSTLKQLYTAGYATSLISLITAVIIFTCFRKFHCTRNYIHINLFVSFILRASAVFIKGTVLFSDETQDHCLMSTVLCKSAVTFFQFCILTNYFWLLVEGLYLQTLLALTFVSQRKYFWWYILIGWGVPSVVLVVWVLTRQFYDNRGCWDDTDNTNIWWIIKGPITASLFTNIIIFLNVIRILVQKLKSPGVGGNDTGHFMRLAKSTLFLIPLFGMHYTLFAFLPENTGEIIRFYIELGLGSFQGFVVALLYCFLNGEVQAELKRRLWTWLTQTHLSPCKKRRVTVTQIMMHESAHPHSDVCNGHITAV
Protein: Alpha-tocopherol transfer protein-like (Q9BTX7)
Organism: Homo sapiens (Human)
Function: May act as a protein that binds a hydrophobic ligand.
Interaction partners:
Sequence:
MSEESDSLRTSPSVASLSENELPPPPEPPGYVCSLTEDLVTKAREELQEKPEWRLRDVQALRDMVRKEYPNLSTSLDDAFLLRFLRARKFDYDRALQLLVNYHSCRRSWPEVFNNLKPSALKDVLASGFLTVLPHTDPRGCHVVCIRPDRWIPSNYPITENIRAIYLTLEKLIQSEETQVNGIVILADYKGVSLSKASHFGPFIAKKVIGILQDGFPIRIKAVHVVNEPRIFKGIFAIIKPFLKEKIANRFFLHGSDLNSLHTNLPRSILPKEYGGTAGELDTATWNAVLLASEDDFVKEFCQPVPACDSILGQTLLPEGLTSDAQCDDSLRAVKSQLYSCY
Protein: Small ribosomal subunit protein bS18m (37S ribosomal protein rsm18, mitochondrial) (Q9USL7)
Organism: Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Subcellular location: Mitochondrion {ECO:0000269|PubMed:16823372}.
Interaction partners:
- Small ribosomal subunit protein uS11m
- Small ribosomal subunit protein uS15m
- Small ribosomal subunit protein uS2m
- Small ribosomal subunit protein uS14m
- Small ribosomal subunit protein bS16m
- Small ribosomal subunit protein mS35
- Small ribosomal subunit protein uS5m
- Small ribosomal subunit protein mS29
- Small ribosomal subunit protein uS9m
- Small ribosomal subunit protein uS12m
Sequence:
MLGRRIFSPAPNRGFILCNLIQSNNSTRRGFSDNRKFNERNSEASSNVGFQRRVRSNIPSYLSASVEEGDIYSPNDLLFETVKAKNQAKFYEPVREDCFKTVNENPMNYWKNPVILSRFVTELGRIKPRGDTGLTAKNQRLLSRAIRRARAAGIMPTKYKSVYSEN
Protein: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 (G5E975)
Organism: Homo sapiens (Human)
Subcellular location: Nucleus {ECO:0000256|ARBA:ARBA00004123, ECO:0000256|PIRNR:PIRNR038126}.
Interaction partners:
Sequence:
MMMMALSKTFGQKPVKFQLEDDGEFYMIGSEVGNYLRMFRGSLYKRYPSLWRRLATVEERKKIVASSHDHGYTTLATSVTLLKASEVEEILDGNDEKYKAVSISTEPPTYLREQKAKRNSQWVPTLPNSSHHLDAVPCSTTINRNRMGRDKKRTFPLWCGCIAALTLRADSALVLHFDDHDPAVIHENASQPEVLVPIRLDMEIDGQKLRDAFTWNMNEKLMTPEMFSEILCDDLDLNPLTFVPAIASAIRQQIESYPTDSILEDQSDQRVIIKLNIHVGNISLVDQFEWDMSEKENSPEKFALKLCSELGLGGEFVTTIAYSIRGQLSWHQKTYAFSENPLPTVEIAIRNTGDADQWCPLLETLTDAEMEKKIRDQDRNTRRMRRLANTAPAW