wanglab/gogpt-training-data huggingface dataset:
Protein: Inositol hexakisphosphate (Q57YX2)
Organism: Trypanosoma brucei brucei (strain 927/4 GUTat10.1)
Interaction partners:
- Uncharacterized protein
- Recombination initiation protein NBS1, putative
- BRCT domain-containing protein
- Uncharacterized protein
- non-specific serine/threonine protein kinase
Sequence:
MKQKETASDINGARSLQGSAGTVASPRPPTVYKTYGGSSHLPLIGRLQRAVRRPGSRSRLTLTTSGSSEELTNLKQLLQTQKDRLSRRCQMIDDSLEDCSANRENGTAGIVEGGEEGGKEGVTCPAIRRLAERMLGHVNPETNDLEEYEDEEEEEDSEVRALEDDLCRREARLNIIKDKMKRLWVEKQISPAAAVPPPEPTVLAATTDQEVIDVAEMMYKFASGTSRDNENGKEKMEGSSSIIVGDQQVFDDGISDATAISITDSPATVRPSGAIKSEERACLVPLRSSSLGRLTSGARVFMDLLPNMRDIIVLSPGEVGVARRGDILSENHILKVDSQEALRSRKGAMGIISGAPYFRMVPKLNVAGVGQPRASAVRTIVNELRRVMDGLVVWVNLREEPLVYINNEAHIVRQRSDPTTPIIIPHVTGKSIALIDDKLKKEVIREASENSGNVSVHMEGKDGHMEDQWESVEKDQVFTLEEVFRPLRTNIVYHRLPITQNVGPQPGDFDFVFDLCSDDPRKMIIFNCQTGRGKTSAMMTIASIVRFYQLFAHDAVLDASLLRTEGRCFSFRTIKTIVSLIPNGKLHERRLLVLLDLSDKVYSIADHINNAFTSGTTPAEEAIMHLKQYAYFLVFSYYCEQRIWSFSTKQPFSQWLLGNNEIKLLLERIETMEEEFKEERIAAPVSEAGDFDTDPVRKRRGTVLSANRILCSFPFFASGKEETIGSLRQLAPGVPIFTCGRLTEEGRQCVVKDMRHYFPGKIMWLSLRAEPMVFINEMGYTLVDYDVTTYGKGGEGITMHTSLHAIEQMEERLRRDVLLEAQEHKGYILLHNFDETGKRKAMQIKACSVRTPRSIMTDFAATYDVSYFRIPIPLSGEMLPSDVDPLLEHLSKNTKDTTVFIINDTQGSVRTTVALNILTMYRVSRTCNLRSMSNPARIAAALRTGNSDVVLPQVDIIAYQGRVTDSATRNYKELQVASTICQMLRAGSLLCVTDALIDVGGCGKRWNIVHTIHHYANAITAGTIERTKGIREAVAMVRVYLFVLLSTIYIDAQGDYDAREPFNLWLERRVEVANILSGLEQRAEKAFKYITPSSVGIPSVVHRRGDVLTANYALKADHFPGCQKKGIRPEVCGAPNFRKVRDVNVYGVAIPTILGIRNILSLLGASFESLETYEGEQNDMDLHLGFAAPRLFDPRFQTETLSKPLRGHVVWVNLREEPILYVGDKPFVLRNLETPYVNVELTGIAADEVERVERQLRQDVLKEAEENEGLFLIHDEETPGELVGVCKPVTTEMVKTLRDVYDDFVSNGCRVTLLRLPVTDEQSPTEGNFDALVEALLPHITAHMDRRETLSFVFNCQMGRGRTTTGMVVCCLLIGLVMPEYYKELDSIYDPLYKEEDSKLACGEYRCISDLKRTLTGGREAKHRVDLVIEACSTMQNLRTAIEFFALQVQSPDVTEEQRGRAHHHGVHYLRRYFNLIAFAAYLEEEYDAMKKRVRCSFSRWLAQRRDVTTLCDSAALK
Protein: Protein PRRC2A (HLA-B-associated transcript 2) (Large proline-rich protein BAT2) (Proline-rich and coiled-coil-containing protein 2A) (Protein G2) (P48634)
Organism: Homo sapiens (Human)
Function: May play a role in the regulation of pre-mRNA splicing.
Subcellular location: Cytoplasm {ECO:0000269|PubMed:15752841}. Nucleus {ECO:0000269|PubMed:15752841}.
Interaction partners:
- Large proline-rich protein BAG6
- YTH domain-containing family protein 1
- Ubiquitin-associated protein 2-like
- Phosphatidylserine lipase ABHD16A
- YTH domain-containing family protein 2
- YTH domain-containing family protein 3
- YTH domain-containing protein 1
- 3'-5' RNA helicase YTHDC2
- G patch domain and ankyrin repeat-containing protein 1
- N
Sequence:
MSDRSGPTAKGKDGKKYSSLNLFDTYKGKSLEIQKPAVAPRHGLQSLGKVAIARRMPPPANLPSLKAENKGNDPNVSLVPKDGTGWASKQEQSDPKSSDASTAQPPESQPLPASQTPASNQPKRPPAAPENTPLVPSGVKSWAQASVTHGAHGDGGRASSLLSRFSREEFPTLQAAGDQDKAAKERESAEQSSGPGPSLRPQNSTTWRDGGGRGPDELEGPDSKLHHGHDPRGGLQPSGPPQFPPYRGMMPPFMYPPYLPFPPPYGPQGPYRYPTPDGPSRFPRVAGPRGSGPPMRLVEPVGRPSILKEDNLKEFDQLDQENDDGWAGAHEEVDYTEKLKFSDEEDGRDSDEEGAEGHRDSQSASGEERPPEADGKKGNSPNSEPPTPKTAWAETSRPPETEPGPPAPKPPLPPPHRGPAGNWGPPGDYPDRGGPPCKPPAPEDEDEAWRQRRKQSSSEISLAVERARRRREEEERRMQEERRAACAEKLKRLDEKFGAPDKRLKAEPAAPPAAPSTPAPPPAVPKELPAPPAPPPASAPTPETEPEEPAQAPPAQSTPTPGVAAAPTLVSGGGSTSSTSSGSFEASPVEPQLPSKEGPEPPEEVPPPTTPPVPKVEPKGDGIGPTRQPPSQGLGYPKYQKSLPPRFQRQQQEQLLKQQQQHQWQQHQQGSAPPTPVPPSPPQPVTLGAVPAPQAPPPPPKALYPGALGRPPPMPPMNFDPRWMMIPPYVDPRLLQGRPPLDFYPPGVHPSGLVPRERSDSGGSSSEPFDRHAPAMLRERGTPPVDPKLAWVGDVFTATPAEPRPLTSPLRQAADEDDKGMRSETPPVPPPPPYLASYPGFPENGAPGPPISRFPLEEPGPRPLPWPPGSDEVAKIQTPPPKKEPPKEETAQLTGPEAGRKPARGVGSGGQGPPPPRRESRTETRWGPRPGSSRRGIPPEEPGAPPRRAGPIKKPPPPTKVEELPPKPLEQGDETPKPPKPDPLKITKGKLGGPKETPPNGNLSPAPRLRRDYSYERVGPTSCRGRGRGEYFARGRGFRGTYGGRGRGARSREFRSYREFRGDDGRGGGTGGPNHPPAPRGRTASETRSEGSEYEEIPKRRRQRGSETGSETHESDLAPSDKEAPTPKEGTLTQVPLAPPPPGAPPSPAPARFTARGGRVFTPRGVPSRRGRGGGRPPPQVCPGWSPPAKSLAPKKPPTGPLPPSKEPLKEKLIPGPLSPVARGGSNGGSNVGMEDGERPRRRRHGRAQQQDKPPRFRRLKQERENAARGSEGKPSLTLPASAPGPEEALTTVTVAPAPRRAAAKSPDLSNQNSDQANEEWETASESSDFTSERRGDKEAPPPVLLTPKAVGTPGGGGGGAVPGISAMSRGDLSQRAKDLSKRSFSSQRPGMERQNRRPGPGGKAGSSGSSSGGGGGGPGGRTGPGRGDKRSWPSPKNRSRPPEERPPGLPLPPPPPSSSAVFRLDQVIHSNPAGIQQALAQLSSRQGSVTAPGGHPRHKPGLPQAPQGPSPRPPTRYEPQRVNSGLSSDPHFEEPGPMVRGVGGTPRDSAGVSPFPPKRRERPPRKPELLQEESLPPPHSSGFLGSKPEGPGPQAESRDTGTEALTPHIWNRLHTATSRKSYRPSSMEPWMEPLSPFEDVAGTEMSQSDSGVDLSGDSQVSSGPCSQRSSPDGGLKGAAEGPPKRPGGSSPLNAVPCEGPPGSEPPRRPPPAPHDGDRKELPREQPLPPGPIGTERSQRTDRGTEPGPIRPSHRPGPPVQFGTSDKDSDLRLVVGDSLKAEKELTASVTEAIPVSRDWELLPSAAASAEPQSKNLDSGHCVPEPSSSGQRLYPEVFYGSAGPSSSQISGGAMDSQLHPNSGGFRPGTPSLHPYRSQPLYLPPGPAPPSALLSGLALKGQFLDFSTMQATELGKLPAGGVLYPPPSFLYSPAFCPSPLPDTSLLQVRQDLPSPSDFYSTPLQPGGQSGFLPSGAPAQQMLLPMVDSQLPVVNFGSLPPAPPPAPPPLSLLPVGPALQPPSLAVRPPPAPATRVLPSPARPFPASLGRAELHPVELKPFQDYQKLSSNLGGPGSSRTPPTGRSFSGLNSRLKATPSTYSGVFRTQRVDLYQQASPPDALRWIPKPWERTGPPPREGPSRRAEEPGSRGDKEPGLPPPR
Protein: Putative disease resistance RPP13-like protein 1 (Q9LRR4)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Potential disease resistance protein.
Interaction partners:
- Disease resistance family protein / LRR family protein
- Protein kinase superfamily protein
- Protein kinase superfamily protein
- Protein kinase superfamily protein
- At5g50330
- Bromodomain transcription factor
- Transcription initiation factor TFIID subunit 8
- At3g02160
- Protein DA1-related 5
- Protein kinase superfamily protein
Sequence:
MTGIGEMFLAAFLQALFQTLVSEPFRSFFKRRELNENLLERLSTALLTITAVLIDAEEKQITNPVVEKWVNELRDVVYHAEDALDDIATEALRLNIGAESSSSNRLRQLRGRMSLGDFLDGNSEHLETRLEKVTIRLERLASQRNILGLKELTAMIPKQRLPTTSLVDESEVFGRDDDKDEIMRFLIPENGKDNGITVVAIVGIGGVGKTTLSQLLYNDQHVRSYFGTKVWAHVSEEFDVFKITKKVYESVTSRPCEFTDLDVLQVKLKERLTGTGLPFLLVLDDLWNENFADWDLLRQPFIHAAQGSQILVTTRSQRVASIMCAVHVHNLQPLSDGDCWSLFMKTVFGNQEPCLNREIGDLAERIVHKCRGLPLAVKTLGGVLRFEGKVIEWERVLSSRIWDLPADKSNLLPVLRVSYYYLPAHLKRCFAYCSIFPKGHAFEKDKVVLLWMAEGFLQQTRSSKNLEELGNEYFSELESRSLLQKTKTRYIMHDFINELAQFASGEFSSKFEDGCKLQVSERTRYLSYLRDNYAEPMEFEALREVKFLRTFLPLSLTNSSRSCCLDQMVSEKLLPTLTRLRVLSLSHYKIARLPPDFFKNISHARFLDLSRTELEKLPKSLCYMYNLQTLLLSYCSSLKELPTDISNLINLRYLDLIGTKLRQMPRRFGRLKSLQTLTTFFVSASDGSRISELGGLHDLHGKLKIVELQRVVDVADAAEANLNSKKHLREIDFVWRTGSSSSENNTNPHRTQNEAEVFEKLRPHRHIEKLAIERYKGRRFPDWLSDPSFSRIVCIRLRECQYCTSLPSLGQLPCLKELHISGMVGLQSIGRKFYFSDQQLRDQDQQPFRSLETLRFDNLPDWQEWLDVRVTRGDLFPSLKKLFILRCPELTGTLPTFLPSLISLHIYKCGLLDFQPDHHEYSYRNLQTLSIKSSCDTLVKFPLNHFANLDKLEVDQCTSLYSLELSNEHLRGPNALRNLRINDCQNLQLLPKLNALPQNLQVTITNCRYLRQPMEQQPQYHHPQFHLPRSNVSGSPKSHGSHRSYDSRSSSRYD
Protein: Msu1p (A0A1D8PI61)
Organism: Candida albicans (strain SC5314 / ATCC MYA-2876) (Yeast)
Interaction partners:
- ATP-dependent RNA helicase SUV3, mitochondrial
- Exosome non-catalytic core subunit
- Exosome non-catalytic core subunit
- Ribosomal RNA-processing protein 42
- Exosome non-catalytic core subunit
- Exosome non-catalytic core subunit
- Exosome non-catalytic core subunit
- Exosome non-catalytic core subunit
- Exosome nuclease subunit
- Exosome complex protein
Sequence:
MLRLQEVHIRKCYGSKIILKHNLHISSTLLYNKPSIPSSRRSRSKQKFTSKSKYDDSFFKNIFQENKDNKSKSIETQSQDTHQEVKTSGLEKIQNLVKSKVKSRSIFDSYANLRIDITKPNDELVRSIIKNTKTMNKKRFTDPATSWLSNFSQKEIQELQDFLNNDLPINGTINGKTMETPVKIGDLVTLGSESLRLYLVTSVPKTFNSRICTFLSDRGEIMFAPFSTIGYRFSGLIPDKYHKNIEKFVVLEQKYLNIPPIGIPDAVFSKSNSALPKELQDRENGTKKVVTEEKEEVVDVDGNGDPDESAYLDPNDFIVQQASSQLLSNTDVQTFIVPTTVRQIYVPALLQISNEAFWKMGPMYRKLEELHRSLQVDDNNGEFNTPRTVSIFEILSKLKQPTSEQSTSTIKLGKSPTNSIDYDQRQYKISDVMAVLSLLKKQSHLWTILPCKSSFTPTKVTIWPLAQTKEEERTVEYLNNDDGLTEITKYCGQVALGQKPANTKPIFYNNVEKMLREYVNGKYKDDASISTTLVSLLRKVDKYFVELGIPLKEEAYKNEYSYGKAYDLLTKLNNDVVVNPLLWSEQANLPTEENASANTLTKQKFYNYMDQELANETPNEILQNTIANEIYNEDPLQHLRQDMREIPIYCIDDPTAHEIDDGISIHEDQQDYIVSIHVAEPSSYIKPESIISSLAFEKTSTSYMPDTAFPMLPKLVSDIAGLGIPDKDTRTFVIQYRVDKKTVDEYISNKVNDKNYKVDQLLLDQIISQINESSNIIFATVSNFRQGFTYDKVNEVLNDEIKINQYKSMGQSNDLDFNNLIKLQYISSLLWEIRKSNHAYTNSGNTKLMVKKNNTSNTNCDTEFIYDANELQMKLANSNNTVSIGFANLESASIKLVTENMIIANYLTARFATTNNIKILYRYLDPKFNDELLSEYQKLMKLSDTNNNTSIPTDQLTQMFPFFTRGLVTDKPQKHLLMGLSMYSNITSPLRRYIDLVNQWKIQDFFLGKQQQQQQQSRIDDKNIPAIASYLNGQGEIIRNIQSRANTFWQGLFLRNYQDLKNNYNHNHNHNPIDFKLKLITNPTMGPTVGVYIPNFRFINAHVEVSSEMLEDFKSGQLKIGGLIDSNKLHLKQVDFLENEVIFEYK
Protein: Serine/threonine-protein kinase nekl-3 (EC 2.7.11.34) (Molting protein MLT-1) (Never in mitosis A kinase-like 3) (NimA kinase-like 3) (G5EFM9)
Organism: Caenorhabditis elegans
Function: Probable serine/threonine-protein kinase required for the completion of molting.
Subcellular location: Cytoplasm {ECO:0000269|PubMed:25523392}. Note=In hyp7 syncytium, localizes in puncta and small tubules near the plasma membrane apical region. Does not co-localize with nekl-2. {ECO:0000269|PubMed:25523392}.
Interaction partners:
- SAM domain-containing protein
- ANK_REP_REGION domain-containing protein
- ANK_REP_REGION domain-containing protein
- JmjC domain-containing protein
Sequence:
MDKISNIYNFDDPPPDKLSLELFIIEKKIGKGQFSEVFRAQCTWVDLHVALKKIQVFEMVDQKARQDCLKEIDLLKQLNHVNVIRYYASFIDNNQLNIVLELAEAGDMSRMIKHFKKGGRLIPEKTIWKYFVQLARALAHMHSKRIMHRDIKPANVFITGNGIVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIQESGYNFKSDLWSTGCLLYEMAALQSPFYGDKMNLYSLCKKIENCEYPPLPADIYSTQLRDLVSRCILPEASKRPETSEVLQVAEHMNNYFSPSGDQSTTPSTQF
Protein: Olfactory receptor 10H5 (Olfactory receptor OR19-25) (Olfactory receptor OR19-26) (Q8NGA6)
Organism: Homo sapiens (Human)
Function: Odorant receptor.
Subcellular location: Cell membrane; Multi-pass membrane protein.
Interaction partners:
Sequence:
MQGLNHTSVSEFILVGFSAFPHLQLMLFLLFLLMYLFTLLGNLLIMATVWSERSLHMPMYLFLCALSITEILYTVAIIPRMLADLLSTQRSIAFLACASQMFFSFSFGFTHSFLLTVMGYDRYVAICHPLRYNVLMSLRGCTCRVGCSWAGGLVMGMVVTSAIFHLAFCGHKEIHHFFCHVPPLLKLACGDDVLVVAKGVGLVCITALLGCFLLILLSYAFIVAAILKIPSAEGRNKAFSTCASHLTVVVVHYGFASVIYLKPKGPQSPEGDTLMGITYTVLTPFLSPIIFSLRNKELKVAMKKTCFTKLFPQNC
Protein: Protein FAM9B (Q8IZU0)
Organism: Homo sapiens (Human)
Subcellular location: Nucleus {ECO:0000269|PubMed:12213195, ECO:0000269|PubMed:34507348}. Cytoplasm {ECO:0000269|PubMed:34507348}. Chromosome {ECO:0000269|PubMed:34507348}. Note=In the testis, localizes to primary spermatocyte nuclei and Sertoli cell cytoplasm (PubMed:34507348). Colocalizes with the synaptonemal complex in primary spermatocytes (PubMed:34507348). In the ovary, expressed in follicle cell nuclei and diffusely dispersed in the granular cell cytoplasm (PubMed:34507348). {ECO:0000269|PubMed:34507348}.
Interaction partners:
Sequence:
MAAWGKKHAGKDPVRDECEERNRFTETREEDVTDEHGEREPFAETDEHTGANTKKPEDTAEDLTAKRKRMKMDKTCSKTKNKSKHALRKKQLKRQKRDYIHSLKLLNVLEEYITDEQKEEEEEEGEEEELIRIFQEQQKKWQQYRSVRRERLKEMKLLRDQFVKALEDFEDLCDRVFSDEDSELDN
Protein: Transposon Ty2-OR1 Gag-Pol polyprotein (TY2A-TY2B) (Transposon Ty2 TYA-TYB polyprotein) [Cleaved into: Capsid protein (CA); Ty2 protease (PR) (EC 3.4.23.-); Integrase (IN); Reverse transcriptase/ribonuclease H (RT) (RT-RH) (EC 2.7.7.49) (EC 2.7.7.7) (EC 3.1.26.4)] (Q12113)
Organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Function: Capsid protein (CA) is the structural component of the virus-like particle (VLP), forming the shell that encapsulates the retrotransposons dimeric RNA genome. The particles are assembled from trimer-clustered units and there are holes in the capsid shells that allow for the diffusion of macromolecules. CA has also nucleocapsid-like chaperone activity, promoting primer tRNA(i)-Met annealing to the multipartite primer-binding site (PBS), dimerization of Ty2 RNA and initiation of reverse transcription (By similarity).
Subcellular location: Cytoplasm. Nucleus {ECO:0000250}.
Interaction partners:
Sequence:
MESQQLSQNSPTFHGSAYASVTSKEVPSNQDPLAVSASNLPEFDRDSTKVNSQQETTPGTSAVPENHHHVSPQPASVPPPQNGQYQQHGMMTPNKAMASNWAHYQQPSMMTCSHYQTSPAYYQPDPHYPLPQYIPPLSTSSPDPIGSQDQHSEVPQAKTKVRNNVLPPHTLTSEENFSTWVKFYIRFLKNSNLGDIIPNDQGEIKRQMTYEEHAYIYNTFQAFAPFHLLPTWVKQILEINYSDILTVLCKSVSKMQTNNQELKDWIALANLEYNGSTSADTFEITVSTIIQRLKENNINVSDRLACQLILKGLSGDFKYLRNQYRTKTNMKLSQLFAEIQLIYDENKIMNLNKPSQYKQHSEYKNVSRTSPNTTNTKVTTRNYHRTNSSKPRAAKAHNIATSSKFSRVNNDHINESTVSSQYLSDDNELSLGQQQKESKPTRTIDSNDELPDHLLIDSGASQTLVRSAHYLHHATPNSEINIVDAQKQDIPINAIGNLHFNFQNGTKTSIKALHTPNIAYDLLSLSELANQNITACFTRNTLERSDGTVLAPIVKHGDFYWLSKKYLIPSHISKLTINNVNKSKSVNKYPYPLIHRMLGHANFRSIQKSLKKNAVTYLKESDIEWSNASTYQCPDCLIGKSTKHRHVKGSRLKYQESYEPFQYLHTDIFGPVHHLPKSAPSYFISFTDEKTRFQWVYPLHDRREESILNVFTSILAFIKNQFNARVLVIQMDRGSEYTNKTLHKFFTNRGITACYTTTADSRAHGVAERLNRTLLNDCRTLLHCSGLPNHLWFSAVEFSTIIRNSLVSPKNDKSARQHAGLAGLDITTILPFGQPVIVNNHNPDSKIHPRGIPGYALHPSRNSYGYIIYLPSLKKTVDTTNYVILQNKQTKLDQFDYDTLTFDDDLNRLTAHNQSFIEQNETEQSYDQNTESDHDYQSEIEINSDPLVNDFSSQSLNPLQLDKEPVQKVRAPKEVDADISEYNILPSTIRSRTPHIINKESTEMGGTIESDTTSPRHSSTFTARNQKRPGSPNDMIDLTSQDRVNYGLENIKTTRLGGTEEPYIQRNSDTNIKYRTTNSTPSIDDRSSNSESTTPIISIETKAACDNTPSIDTDPPEYRSSDHATPNIMPDKSSKNVTADSILDDLPLPDLTHQSPTDTSDVSKDIPHIHSRQTNSSLGGMDDSNVLTTTKSKKRSLEDNETEIEVSRDTWNNKNMRSLEPPRSKKRINLIAAIKGVKSIKPVRTTLRYDEAITYNKDNKEKDRYVEAYHKEISQLLKMNTWDTNKYYDRNDIDPKKVINSMFIFNKKRDGTHKARFVARGDIQHPDTYDSDMQSNTVHHYALMTSLSIALDNDYYITQLDISSAYLYADIKEELYIRPPPHLGLNDKLLRLRKSLYGLKQSGANWYETIKSYLINCCDMQEVRGWSCVFKNSQVTICLFVDDMILFSKDLNANKKIITTLKKQYDTKIINLGEGDNEIQYDILGLEIKYQRSKYMKLGMEKSLTEKLPKLNVPLNPKGKKLRAPGQPGHYIDQDELEIDEDEYKEKVHEMQKLIGLASYVGYKFRFDLLYYINTLAQHILFPSRQVLDMTYELIQFMWDTRDKQLIWHKNKPTKPDNKLVAISDASYGNQPYYKSQIGNIFLLNGKVIGGKSTKASLTCTSTTEAEIHAVSEAIPLLNNLSHLVQELNKKPIIKGLLTDSRSTISIIKSTNEEKFRNRFFGTKAMRLRDEVSGNNLYVYYIETNKNIADVMTKPLPIKTFKLLTNKWIH
Protein: Large ribosomal subunit protein uL15m (39S ribosomal protein L15, mitochondrial) (L15mt) (MRP-L15) (Q0VC21)
Organism: Bos taurus (Bovine)
Subcellular location: Mitochondrion {ECO:0000269|PubMed:10593885, ECO:0000269|PubMed:11279069}.
Interaction partners:
- Large ribosomal subunit protein bL21m
- Large ribosomal subunit protein uL4m
- Large ribosomal subunit protein mL49
- Large ribosomal subunit protein mL62
- Large ribosomal subunit protein bL28m
- Large ribosomal subunit protein uL13m
- Large ribosomal subunit protein bL27m
- Large ribosomal subunit protein bL12m
- Small ribosomal subunit protein mS29
- Large ribosomal subunit protein bL35m
Sequence:
MAGPVRGAAGPWALDLLRALPRVSLANLRPNPGSRKPERRRRGQRRGRKCGRGHKGERQRGTRPRLGFEGGQTPFYLRIPKYGFNEGHSFRRQYQPLSLNRLQYLIDLGRVDPTQPIDLTQLVNGRGVTIQPSKRDYGVQLVEEGADTFKAKVNIEVQLASELAIAAIEKNGGVVTTAFYDPRSLEILCKPIPFFLRGQPIPKRMLPPEALVPYYTDARNRGYLADPARFPEARLELAKKYGYILPDITKDELFKMLSSRKDPRQIFFGLAPGWVVNMADKKILKPTDEKLLEYYSS
Protein: Histone deacetylase (EC 3.5.1.98) (Q7K6A1)
Organism: Plasmodium falciparum (isolate 3D7)
Subcellular location: Nucleus {ECO:0000256|PIRNR:PIRNR037913}.
Interaction partners:
- Zinc finger protein, putative
- SANT domain-containing protein
- EELM2 domain-containing protein, putative
- Histone deacetylase 2
- Chromatin assembly factor 1 protein WD40 domain, putative
- Chromatin assembly factor 1 P55 subunit, putative
- Chromatin assembly factor 1 subunit B, putative
- histone deacetylase
- LisH domain-containing protein, putative
- U3 small nucleolar RNA-associated protein 15, putative
Sequence:
MSNRKKVAYFHDPDIGSYYYGAGHPMKPQRIRMTHSLIVSYNLYKYMEVYRPHKSDVNELTLFHDYEYIDFLSSISLENYREFTYQLKRFNVGEATDCPVFDGLFQFQQSCAGASIDGASKLNHHCADICVNWSGGLHHAKMSEASGFCYINDIVLGILELLKYHARVMYIDIDVHHGDGVEEAFYVTHRVMTVSFHKFGDYFPGTGDITDVGVNHGKYYSVNVPLNDGMTDDAFVDLFKVVIDKCVQTYRPGAIIIQCGADSLTGDRLGRFNLTIKGHARCVEHVRSYNIPLLVLGGGGYTIRNVSRCWAYETGVVLNKHHEMPDQISLNDYYDYYAPDFQLHLQPSNIPNYNSPEHLSRIKMKIAENLRHIEHAPGVQFSYVPPDFFNSDIDDESDKNQYELKDDSGGGRAPGTRAKEHSTTHHLRRKNYDDDFFDLSDRDQSIVPY
Protein: dual-specificity kinase (EC 2.7.12.1) (Q5SY34)
Organism: Homo sapiens (Human)
Interaction partners:
Sequence:
MKWKEKLGDGVYDTFMMIDETKCPPCSNVLCNPSEPPPPRRLNMTTEQFTGDHTQHFLDGGEMKVEQLFQEFGNRKSNTIQSDGISDSEKCSPTVSQGKSSDCLNTVKSNSSSKAPKVVPLTPEQALKQYKHHLTAYEKLEIINYPEIYFVGPNAKKRHGVIGGPNNGGYDDADGAYIHVPRDHLAYRYEVLKIIGKGSFGQVARVYDHKLRQYVALKMVRNEKRFHRQAAEEIRILEHLKKQ
Protein: Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 2 (EC 3.1.3.16) (Small C-terminal domain phosphatase 2) (Small CTD phosphatase 2) (SCP2) (Q8BX07)
Organism: Mus musculus (Mouse)
Function: Preferentially catalyzes the dephosphorylation of 'Ser-5' within the tandem 7 residue repeats in the C-terminal domain (CTD) of the largest RNA polymerase II subunit POLR2A. Negatively regulates RNA polymerase II transcription, possibly by controlling the transition from initiation/capping to processive transcript elongation. Recruited by REST to neuronal genes that contain RE-1 elements, leading to neuronal gene silencing in non-neuronal cells (By similarity).
Subcellular location: Nucleus {ECO:0000250}.
Interaction partners:
Sequence:
MEHGSIITQARREDALVLTKQGLVSKSSPKKPRGRSIFKALLCCFHTQHVVQSSSSTELTHKEEANTIAKSDLLQCLQYQFYQIPGTCLLPEVTEQDQGRICVVIDLDETLVHSSFKPINNADFIVPVEIEGTTHQVYVLKRPYVDEFLRRMGELFECVLFTASLAKYADPVTDLLDRCGVFRARLFREACVFHQGCYVKDLSRLGRDLRKTVILDNSPASYIFHPENAVPVQSWFDDMADTELLNLIPVFEELSGTDDVYTSLGQLRAP
Protein: WD40 domain protein beta Propeller (Q72FE8)
Organism: Nitratidesulfovibrio vulgaris (strain ATCC 29579 / DSM 644 / CCUG 34227 / NCIMB 8303 / VKM B-1760 / Hildenborough) (Desulfovibrio vulgaris)
Interaction partners:
- Ferredoxin, 4Fe-4S, putative
- Membrane protein, putative
- Acidic cytochrome c3
- Universal stress protein family
- histidine kinase
- TPR domain protein
- OmpA family protein
- histidine kinase
- Uncharacterized protein
- Protein DVU_0532
Sequence:
MGRKVIAESVAPLEGHLWQEEAQFAPDGSAFAAVVCVEEGAFSLRVNDTVWDTTFEKAWYPRYTPDGRLTALVQIDGEWTLAVDGTPWEEMYGFVWDTHFGSNGDIILPVQQDMQYGLSINGTPWETLYENANNFSVSPSGARTAAVVQTVSLGQADIETYQKGAYTVAIDGEPWPRVFINAWTPVFDTHGRRVAAQVRLSLYDYTIAVDGEPWPVTFPCVWEPVFDPATGSVAAPVRKDGRWGMALDGNLIWPASFFQCWHPRFSPDGRRLWAIVAPDYGSFTVACDGIPWGNRFPVVSDLVLSPDGSRAAAVGNHDNTRFSVIVDDKVWPGEWDMVWAPVFSADGAHVAVKARKGDTFHFIVDGKPWREGFSQAGTPVFGPDGDRLLMCGVQNGAAVRHIVACNDF
Protein: C-terminal-binding protein 2 (CtBP2) (P56545)
Organism: Homo sapiens (Human)
Function: Corepressor targeting diverse transcription regulators. Functions in brown adipose tissue (BAT) differentiation (By similarity).
Subcellular location: Nucleus {ECO:0000305}. Synapse {ECO:0000250}.
Interaction partners:
- C-terminal-binding protein 1
- DNA endonuclease RBBP8
- Zinc finger E-box-binding homeobox 1
- Zinc finger protein 217
- Krueppel-like factor 3
- Histone deacetylase 2
- Histone deacetylase 1
- Krueppel-like factor 8
- Transcription factor 7
- Histone-lysine N-methyltransferase MECOM
Sequence:
MALVDKHKVKRQRLDRICEGIRPQIMNGPLHPRPLVALLDGRDCTVEMPILKDLATVAFCDAQSTQEIHEKVLNEAVGAMMYHTITLTREDLEKFKALRVIVRIGSGYDNVDIKAAGELGIAVCNIPSAAVEETADSTICHILNLYRRNTWLYQALREGTRVQSVEQIREVASGAARIRGETLGLIGFGRTGQAVAVRAKAFGFSVIFYDPYLQDGIERSLGVQRVYTLQDLLYQSDCVSLHCNLNEHNHHLINDFTIKQMRQGAFLVNAARGGLVDEKALAQALKEGRIRGAALDVHESEPFSFAQGPLKDAPNLICTPHTAWYSEQASLEMREAAATEIRRAITGRIPESLRNCVNKEFFVTSAPWSVIDQQAIHPELNGATYRYPPGIVGVAPGGLPAAMEGIIPGGIPVTHNLPTVAHPSQAPSPNQPTKHGDNREHPNEQ
Protein: Expressed protein (FkbM family methyltransferase) (O48783)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Interaction partners:
- Alpha/beta-Hydrolases superfamily protein
- T-complex protein 1 subunit eta
- Structural maintenance of chromosomes protein 1
- K
- Magnesium-chelatase subunit ChlD, chloroplastic
Sequence:
MASAWKKDKNQKLLSPKTLISLLVLSIIFLSSLFFFFSNSSLQYSNPNLSINSPYPIPPFDCFKCPQSKPIIANVVENLKYPFVYSLADLGNLPEKPHKNIVRLLKGKPFRKPDISATIQEVLDSMRASGKNGIVVDVGANVGMASFAAAVMGFKVLAFEPVFENLQRICDGIWFNRVASLVTVFEAAASDRTGDITFHKLVGRLDNSAVSEVGARLAFKSNKEIAVQVKSIPLDKLIPPSQPVLLIKIDVQGWEYHVLKGAKKLLSGKPAEAPYLIYEEDERLLTASNSSSKEIRDFLKSVGYSKCSQHGTDAHCTKE
Protein: B-lymphocyte antigen CD19 (B-lymphocyte surface antigen B4) (Differentiation antigen CD19) (T-cell surface antigen Leu-12) (CD antigen CD19) (P15391)
Organism: Homo sapiens (Human)
Function: Functions as coreceptor for the B-cell antigen receptor complex (BCR) on B-lymphocytes. Decreases the threshold for activation of downstream signaling pathways and for triggering B-cell responses to antigens. Activates signaling pathways that lead to the activation of phosphatidylinositol 3-kinase and the mobilization of intracellular Ca(2+) stores. Is not required for early steps during B cell differentiation in the blood marrow. Required for normal differentiation of B-1 cells (By similarity). Required for normal B cell differentiation and proliferation in response to antigen challenges. Required for normal levels of serum immunoglobulins, and for production of high-affinity antibodies in response to antigen challenge.
Subcellular location: Cell membrane {ECO:0000269|PubMed:1373518, ECO:0000269|PubMed:1383329, ECO:0000269|PubMed:16672701, ECO:0000269|PubMed:1702139, ECO:0000269|PubMed:2463100, ECO:0000269|PubMed:9317126, ECO:0000269|PubMed:9382888}; Single-pass type I membrane protein {ECO:0000305}. Membrane raft {ECO:0000250|UniProtKB:P25918}; Single-pass type I membrane protein {ECO:0000250|UniProtKB:P25918}.
Interaction partners:
- Tyrosine-protein kinase Lyn
- Interferon-induced transmembrane protein 1
- Complement receptor type 2
- CD81 antigen
- B-cell antigen receptor complex-associated protein alpha chain
- Low affinity immunoglobulin gamma Fc region receptor III-B
- Proto-oncogene vav
- Low affinity immunoglobulin gamma Fc region receptor III-A
- B-cell receptor CD22
- B-cell antigen receptor complex-associated protein beta chain
Sequence:
MPPPRLLFFLLFLTPMEVRPEEPLVVKVEEGDNAVLQCLKGTSDGPTQQLTWSRESPLKPFLKLSLGLPGLGIHMRPLAIWLFIFNVSQQMGGFYLCQPGPPSEKAWQPGWTVNVEGSGELFRWNVSDLGGLGCGLKNRSSEGPSSPSGKLMSPKLYVWAKDRPEIWEGEPPCLPPRDSLNQSLSQDLTMAPGSTLWLSCGVPPDSVSRGPLSWTHVHPKGPKSLLSLELKDDRPARDMWVMETGLLLPRATAQDAGKYYCHRGNLTMSFHLEITARPVLWHWLLRTGGWKVSAVTLAYLIFCLCSLVGILHLQRALVLRRKRKRMTDPTRRFFKVTPPPGSGPQNQYGNVLSLPTPTSGLGRAQRWAAGLGGTAPSYGNPSSDVQADGALGSRSPPGVGPEEEEGEGYEEPDSEEDSEFYENDSNLGQDQLSQDGSGYENPEDEPLGPEDEDSFSNAESYENEDEELTQPVARTMDFLSPHGSAWDPSREATSLGSQSYEDMRGILYAAPQLRSIRGQPGPNHEEDADSYENMDNPDGPDPAWGGGGRMGTWSTR
Protein: Insulin-like growth factor 1 (Insulin-like growth factor I) (G8HMZ3)
Organism: Gallus gallus (Chicken)
Interaction partners:
Sequence:
MEKINSLSTQLVKCCFCDFLKVKMHTVSYIHFFYLGLCLLTLTSSAAAGPETLCGAELVDALQFVCGDRGFYFSKPTGYGSSSRRLHHKGIVDECCFPICDLRRLEVYCAPIKPPNSARSVLGQRHTDMPKAQKEVHLKNTSRGNTGNRNYGM
Protein: Polyamine deacetylase HDAC10 (EC 3.5.1.48) (EC 3.5.1.62) (Histone deacetylase 10) (HD10) (Q969S8)
Organism: Homo sapiens (Human)
Function: Polyamine deacetylase (PDAC), which acts preferentially on N(8)-acetylspermidine, and also on acetylcadaverine and acetylputrescine. Exhibits attenuated catalytic activity toward N(1),N(8)-diacetylspermidine and very low activity, if any, toward N(1)-acetylspermidine. Histone deacetylase activity has been observed in vitro. Has also been shown to be involved in MSH2 deacetylation. The physiological relevance of protein/histone deacetylase activity is unclear and could be very weak. May play a role in the promotion of late stages of autophagy, possibly autophagosome-lysosome fusion and/or lysosomal exocytosis in neuroblastoma cells. May play a role in homologous recombination. May promote DNA mismatch repair.
Subcellular location: Cytoplasm {ECO:0000269|PubMed:11677242, ECO:0000269|PubMed:11726666, ECO:0000269|PubMed:11739383, ECO:0000269|PubMed:11861901, ECO:0000269|PubMed:23801752}. Nucleus {ECO:0000269|PubMed:11677242, ECO:0000269|PubMed:11726666, ECO:0000269|PubMed:11739383, ECO:0000269|PubMed:11861901}. Note=Excluded from nucleoli. {ECO:0000269|PubMed:11726666}.
Interaction partners:
- Nuclear receptor corepressor 2
- Histone acetyltransferase KAT2A
- Histone deacetylase 2
- Histone H4
- Histone acetyltransferase KAT2B
- Histone H2B type 2-E
- Histone H2A type 2-C
- Histone H2A type 2-A
- Histone H2AX
- Nuclear receptor corepressor 1
Sequence:
MGTALVYHEDMTATRLLWDDPECEIERPERLTAALDRLRQRGLEQRCLRLSAREASEEELGLVHSPEYVSLVRETQVLGKEELQALSGQFDAIYFHPSTFHCARLAAGAGLQLVDAVLTGAVQNGLALVRPPGHHGQRAAANGFCVFNNVAIAAAHAKQKHGLHRILVVDWDVHHGQGIQYLFEDDPSVLYFSWHRYEHGRFWPFLRESDADAVGRGQGLGFTVNLPWNQVGMGNADYVAAFLHLLLPLAFEFDPELVLVSAGFDSAIGDPEGQMQATPECFAHLTQLLQVLAGGRVCAVLEGGYHLESLAESVCMTVQTLLGDPAPPLSGPMAPCQSALESIQSARAAQAPHWKSLQQQDVTAVPMSPSSHSPEGRPPPLLPGGPVCKAAASAPSSLLDQPCLCPAPSVRTAVALTTPDITLVLPPDVIQQEASALREETEAWARPHESLAREEALTALGKLLYLLDGMLDGQVNSGIAATPASAAAATLDVAVRRGLSHGAQRLLCVALGQLDRPPDLAHDGRSLWLNIRGKEAAALSMFHVSTPLPVMTGGFLSCILGLVLPLAYGFQPDLVLVALGPGHGLQGPHAALLAAMLRGLAGGRVLALLEENSTPQLAGILARVLNGEAPPSLGPSSVASPEDVQALMYLRGQLEPQWKMLQCHPHLVA