wanglab/gogpt-training-data huggingface dataset:
Protein: Radish, isoform J (X2JJU0)
Organism: Drosophila melanogaster (Fruit fly)
Interaction partners:
Sequence:
MTMTAICFVCNLPIMSHQVGLVWQGGNGWDDLVREQLEESTIRQRLGGRRDSAAQITTPPSTSPPPGLQRRRRSSLAQLTDILREWSGGTKQQQQHHSQQQQQQLQQASRSKAQLNRRETLADLARSLPWRTSTTTDASTGAGGSGGGGCTTYMAPRKRRESSADSGIRSMRSRRDSNTAEFVRHWNRRESGAVEEQPSVSVPVVVECSKSASRRGSGESYLSSSRRDSNVAGRVTTPPPPGKYQMTKKRDSLAAPEFPNFRQEQRPSTSSAGSCSDHSMPLISTHSSTHHLAHQQVDSACQALPPPTIITSSVTPPATSPTAPKGRRDSQTQCGRVNRRDSKAGVSPERAPRLQRLQRQATAFDEGCLPGGSRRGSQPALSPDPPDDCERRTSRRDSLSPDSASRGGRRDSRTHLSPDRSHERDGSPRRHTLRRQSSSAARSPRSPDSNSCCSSRDPSPCSRPQTQTTVEQNQRPAIRRQSTTEEILIARGFRRQSTTEEMIRCRNFRRQSSQSDDVCRYRGRRDSSAQIIDGTIGTMTVETTSTFFDSSTQTEPSPLYDNNHYHEECLRCNSCGLNLTGPNQKRARRFKNQILCDLHFADVALMECSDFMQQLRSFKPQSLGCAVARRKSSTTLIFPLPPQACSDEFCEEYPHNLMPTPGYWIECSRQKITMPTPHTIWDESDSEHEDIRAGSASDAYLERECSDLYEDDEDSEATPSPRKKTTIEEQWDQQGAFELISVEQETYEKYFYGTEHWNYFTSDEDLGPVILSIKQETLNGRDQFRILVRAGSYTVHGLIPASCVFADRYNREEVVRSLGKEVNLNPPLTLGQLPDTPEELLKLDQVFIKSELKVGVIFVKEDQYTEEQILDNNENSPLFDEFLTLLGDRVRLRGFDKYKGGLDTVHDLTGLFSVYTNWRNIEIMFHVSTLLPYEKHDPQKLQRKRHIGNDIVCVVFLEADNTRFSPACIKSHFLHTFILVRVSARIKHKPTRYEVSVVTRDEVGAYKPYLWEQSVFEKGPMFREWLLTKIVNGERASYSAPKFARMQERTRSQMLEDLVMNLSNHAETGQIPKPYRRGSWRPIGEDEYIKMLHARVLDNNTHHEQQQQLLLQQQHMQHTQHMQHLPSHNICCYCNNNATELHTAGAIHNNNDNNNTTTTTTFTHRHNNNNNNYSEQQQQQLPQQQQHDSQQQQQLLQPQQHQLLHQLQLSTSSLTHTSCCAMLHLCARHSHMRPSSPLLDSVRDQFEDYDQLAKDFTRVFLNEEPSCLTNAHLFDVVFLVGQSKQKARFIGVRAILGVRSRVFQEMLYGIQTGFGSPQIPVAEIFARPAPSLVSPQNQKPKSNNYLTVPDSDSIRPKSVPSSPMVKRAFSRLGTITAGWGRSIRNKNTNQLNPDDKKKWISSTDYRDSKDKDKDKPGNNQLAVPRLSVCADAQKVDRAKLAQTEFNIIEFDPDTFRVLLDYLHTGTCPLTCVSIPGLLCAAEHYDLPELLQACFHHCKQFLRIEVVCPMLISLENYYWRYTSASELVNMILSFVESKAHSLFKCPEFLHLSESMVQMIMCRELQTPEIRKFEAMLAWAQHKVGKLKNHPNKDTQFEFECIMERLTRDLNLCRISPSELLTVVLPSKSMKNERIMETLMVQVNLGTYRMPELDAYRQQLRQQESAEATVQVHRAHQNHHNPPPIDARAYAMASLAAALEMQNSSNPLQSNAARDAADEEVELYASFDNAPSTSRVAAQMQAAKEARRKRWAADGASGSSGDGGCASGSSGSGRRY
Protein: UBX domain-containing protein 1 (SAPK substrate protein 1) (Q499N6)
Organism: Rattus norvegicus (Rat)
Function: Ubiquitin-binding protein that interacts with the BRCA1-BARD1 heterodimer, and regulates its activity. Specifically binds 'Lys-6'-linked polyubiquitin chains. Interaction with autoubiquitinated BRCA1, leads to inhibit the E3 ubiquitin-protein ligase activity of the BRCA1-BARD1 heterodimer. Component of a complex required to couple deglycosylation and proteasome-mediated degradation of misfolded proteins in the endoplasmic reticulum that are retrotranslocated in the cytosol (By similarity).
Subcellular location: Cytoplasm {ECO:0000250}.
Interaction partners:
- UBX domain-containing protein 7
- FAS-associated factor 2
- FAS-associated factor 1
- Transitional endoplasmic reticulum ATPase
- UBX domain-containing protein 7
- BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 2
- Large proline-rich protein BAG6
- BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 3
- BTB/POZ domain-containing protein 9
- Melanoma-associated antigen D1
Sequence:
MAELTALESLIEMGFPRGRAEKALALTGNQGIEAAMDWLMEHEDDPDVDEPLETPLSHILGREPTPSEQVGPEGSGSAAGESKPVLTEEERQEQTKRMLELVAQKQREREEREEREALEREKQRRRQGQELSAARQKLQEDEIRRAAEERRREKAEELAARQRVREKIERDKAERAQKYGGTVGSRSSPPATDPGPVPSSPRQEPPTKREYDQCRIQVRLPDGTSLTQTFRAREQLAAVRLYVELHRGEEPGQDQDPVQLLSGFPRRAFSEADMERPLQELGLVPSAVLIVAKKCPS
Protein: Brassinosteroid-responsive RING protein 1 (Q9XF92)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: May be involved in the brassinosteroids (BRs) signaling pathway and regulate the growth and development of rosette leaves. Seems to prevent over development of leaves and inflorescence stems.
Subcellular location: Membrane {ECO:0000255}; Single-pass membrane protein {ECO:0000255}.
Interaction partners:
- BNR/Asp-box repeat family protein
- E3 ubiquitin protein ligase RIE1
- RING-H2 finger protein ATL14
- At5g63780
- E3 ubiquitin-protein ligase XBAT32
- E3 ubiquitin-protein ligase SINAT5
- E3 ubiquitin-protein ligase SIS3
- E3 ubiquitin-protein ligase SDIR1
Sequence:
MGFPVGYTEVFLPKLFVQTLSILGFIRTIVFSIFRFLGLSDFLEMDQTWPDYTSYPTRIPETRSPFSALLIREILPVIKFEELTNSGEDLPENCAVCLYEFEGEQEIRWLRNCRHIFHRSCLDRWMDHDQKTCPLCRTPFVPDEMQEEFNQRLWAASGVHDFHCPVTELL
Protein: ADP-ribosylation factor GTPase activating protein 1, isoform B (M9PFF1)
Organism: Drosophila melanogaster (Fruit fly)
Interaction partners:
Sequence:
MASPRTRRVLQELKPQDENSKCFECGTHNPQWVSVTYGIWICLECSGKHRSLGVHLSFVRSVTMDKWKDIELEKMKAGGNRNAREFLEDQEDWNERAPITQRYNSKAAALYRDKIATLAQGKSWDLKEAQGRVGSNNSFSSGGSSNSSYQSRPSATGYGGNGGYQNGGGAEPGGYQQYQTQEFKDQKEEFFSRRQVENASRPENLPPSQGGKYAGFGFTREPPPKTQSQELFDSTLSTLASGWSLFSTNASKLASTAKEKAVTTVNLASTKVTDMGKRGWNNLAGSNISSPQGGYNDPNFEDSSAYQRSNSVGGNLAGGLGQQSGVSDSDWGGWQDNGNSKSHMTSSSSYHNQLSSSSGGGTASAGLTRDADWSGFEATNYQSSETSYQNASSGGSTARRNMKLQDTSQKLSEGFESLDVKSVKPKTATASSANKGTAEDDAWNLLMN
Protein: Neuromedin U (Neuromedin-U isoform X1) (F1R3S7)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Interaction partners:
- Neuromedin U receptor 1a
- Neuromedin U receptor 1b
- Neuromedin U receptor 3
- Pro-neuropeptide Y
- Neurotensin receptor 1
- Neurotensin.
- Neuropeptide B
- FMRFamide related peptide 1
- Voltage-gated delayed rectifier potassium channel KCNH4
- Hypocretin
Sequence:
MRNSNQCERATAHSAMSPGNTSALMLAVLLLSFIPITTSAPMLLNPSSLEHEQLLTQITDLCSFYLSADPSFRTSDVLEDLCFLMLGSLQKSKEITARETSKRFLFHYTKPNGAGLSDGTSTVLHPLLELIPQLARRRSRRMKLNENLQGPGRIQSRGYFLYRPRNGRRSDEYV
Protein: Pre-rRNA-processing protein TSR2 (Q386Y2)
Organism: Trypanosoma brucei brucei (strain 927/4 GUTat10.1)
Interaction partners:
- 40S ribosomal protein S26
- Bms1-type G domain-containing protein
- RNA-binding protein NOB1
- Protein LTV1 homolog
- Nitroreductase, putative
- Ribosome production factor 2 homolog
- Histone-binding protein RBBP4-like N-terminal domain-containing protein
- U3 small nuclear ribonucleoprotein
- 60S ribosomal protein L24, putative
- Nop14-like protein
Sequence:
MQQQQQVPVGLQLMRQPYRATAEQFQRFIVGLDAVLNQWTALHLVSQHCDLSALTSMYRELVSWFQKDGEVYSDDLEIFFENFFGEARSVIVEDDSMKEVGDVLHDMYCRCCQNDFSTVERYVASLEVYRRVNPVQLSMNVGGADDEDELAGAGAMSNTYDGVVGNEEEEMETMGDGLDMKDEVEESEQRKKRRSKKRKNAYERDADGWCVVRN
Protein: RNA 2',3'-cyclic phosphodiesterase (RNA 2',3'-CPDase) (EC 3.1.4.58) (Two-histidine 2',3'-cyclic phosphodiesterase acting on RNA) (P37025)
Organism: Escherichia coli (strain K12)
Function: Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'-phosphomonoester. In vitro, can also ligate 5' and 3' half-tRNA molecules with 2',3'-cyclic phosphate and 5'-hydroxyl termini, respectively, to the product containing the 2'-5' phosphodiester linkage. This reaction does not require ATP and is reversible.
Interaction partners:
- NMN amidohydrolase-like protein YfaY
- Sugar fermentation stimulation protein A
- RNA-splicing ligase RtcB
Sequence:
MSEPQRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLAGRIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPFHPHITLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWALTQ
Protein: Cell death protein rpr (Protein reaper) (Q24475)
Organism: Drosophila melanogaster (Fruit fly)
Function: Activator of apoptosis, as well as grim and hid, that acts on the effector Dredd.
Interaction partners:
- Death-associated inhibitor of apoptosis 1
- Caspase Dronc
- Dual E2 ubiquitin-conjugating enzyme/E3 ubiquitin-protein ligase BIRC6
- Cell death protein Grim
- Caspase drICE
- Apoptosome protein Dark
- Death-associated inhibitor of apoptosis 2
- Transmembrane GTPase Marf
- Transmembrane GTPase fzo
- Tumor necrosis factor family member eiger
Sequence:
MAVAFYIPDQATLLREAEQKEQQILRLRESQWRFLATVVLETLRQYTSCHPKTGRKSGKYRKPSQ
Protein: Uncharacterized protein YKR045C (P36138)
Organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Subcellular location: Cytoplasm {ECO:0000269|PubMed:11914276}.
Interaction partners:
- Uncharacterized protein YNL144C
- PH domain-containing protein YHR131C
- Protein SBE2
Sequence:
MSNSHHTSQGRRNKLSVWVKKIINTTTTTNASVSSSKPRRGTRAGPTRVKRAELDPDGTTISSSLRPLVDRNSLHSSESDDEGDRRVAWDEPPTGKVRQQQQQQQQQQNDNASVIPLVSFCSSSVKSSTFSDIHSIQSTRPTIFSNRTFETNSSVLAIPPQSILDRSRTLPPSNASNTTTRRP
Protein: 2-aminomuconic semialdehyde dehydrogenase (EC 1.2.1.32) (Aldehyde dehydrogenase family 8 member A1) (Retinal dehydrogenase 4) (Q8BH00)
Organism: Mus musculus (Mouse)
Function: Catalyzes the NAD-dependent oxidation of 2-aminomuconic semialdehyde of the kynurenine metabolic pathway in L-tryptophan degradation.
Subcellular location: Cytoplasm {ECO:0000269|PubMed:12519776}.
Interaction partners:
- 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase
- HBS1-like protein
- UDP-glucuronosyltransferase 3A1
Sequence:
MAGKRELLMLENFIGGKFLPCNSYIDSYDPSTGEVYCKVPNSGKEEIEAAVEAAREAFPAWSSRSPQERSLVLNRLADVLEQSLEELAQAESKDQGKTLTLARTMDIPRSVLNFRFFASSNLHHVSECTQMSHLGCMHYTVRTPVGIAGLISPWNLPLYLLTWKIAPAIAAGNTVIAKPSEMTSVTAWMFCKLLDKAGVPPGVINIVFGTGPRVGEALVSHPEVPLISFTGSQPTAERITQLSAPHCKKLSLELGGKNPAIIFEDANLEECIPATVRSSFANQGEICLCTSRIFVQRSIYSEFLKRFVEATRKWKVGVPSDPSANMGALISKAHLEKVRSYVLKAQTEGARILCGEGVDQLSLPLRNQAGYFMLPTVITDIKDESRCMTEEIFGPVTCVVPFDSEEEVITRANSVRYGLAATVWSKDVGRIHRVAKKLQSGLVWTNCWLIRELNLPFGGMKSSGIGREGAKDSYDFFTEIKTITIKY
Protein: Functional amyloid subunit FapC (Amyloid-like fimbrin subunit FapC) (ALF subunit FapC) (Fibril amyloid subunit FapC) (Q9I2F0)
Organism: Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Subcellular location: Fimbrium {ECO:0000269|PubMed:23504942}. Secreted {ECO:0000269|PubMed:23504942}. Note=Part of an extracellular amyloid fibril. {ECO:0000269|PubMed:23504942}.
Interaction partners:
- Functional amyloid subunit FapB
- Probable functional amyloid protease FapD
- Functional amyloid transporter FapF
- Secretin/TonB short N-terminal domain-containing protein
Sequence:
MKATMVLTPLALAMAAVLSVSAYAGNEGGWHPPKPNPQSNNKGGATALVVDTQQNYNNKVSNFGTLNNASVSGSIKDASGNVGVNVAAGDNNQQANAAALASADASFVFGTATASTSVLQSGYGNTLNNYSNPNTASLSNSANNVSGNLGVNVAAGNFNQQKNDLAAAVSNGQYSTAGSAASQTSTGNTTVNSANYAYGGTYVSLKLNADGSYKGTSDQIGDVYLDTWEGQTHPGGSNTGHIDVDSQAQGAKDLNHDGGAFAFKEKGDVDLKGTVSGFIPAIVGFKTPVTNNASLSNSLQNVSGNVGVNIAAGGGNQQSNSLSIAAGCSSCPAGGESLGF
Protein: Protein arginine N-methyltransferase 8 (EC 2.1.1.319) (Heterogeneous nuclear ribonucleoprotein methyltransferase-like protein 4) (Q9NR22)
Organism: Homo sapiens (Human)
Function: S-adenosyl-L-methionine-dependent and membrane-associated arginine methyltransferase that can both catalyze the formation of omega-N monomethylarginine (MMA) and asymmetrical dimethylarginine (aDMA) in proteins such as NIFK, myelin basic protein, histone H4, H2A and H2A/H2B dimer. Able to mono- and dimethylate EWS protein; however its precise role toward EWS remains unclear as it still interacts with fully methylated EWS.
Subcellular location: Cell membrane {ECO:0000269|PubMed:16051612, ECO:0000269|PubMed:18320585, ECO:0000269|PubMed:26876602}; Lipid-anchor {ECO:0000269|PubMed:16051612, ECO:0000269|PubMed:18320585, ECO:0000269|PubMed:26876602}; Cytoplasmic side {ECO:0000269|PubMed:16051612, ECO:0000269|PubMed:18320585, ECO:0000269|PubMed:26876602}.
Interaction partners:
- Protein arginine N-methyltransferase 1
- rRNA 2'-O-methyltransferase fibrillarin
- Heterogeneous nuclear ribonucleoprotein Q
- Protein arginine N-methyltransferase 5
- Histone H4
- Heterogeneous nuclear ribonucleoprotein U
- RNA-binding protein EWS
Sequence:
MGMKHSSRCLLLRRKMAENAAESTEVNSPPSQPPQPVVPAKPVQCVHHVSTQPSCPGRGKMSKLLNPEEMTSRDYYFDSYAHFGIHEEMLKDEVRTLTYRNSMYHNKHVFKDKVVLDVGSGTGILSMFAAKAGAKKVFGIECSSISDYSEKIIKANHLDNIITIFKGKVEEVELPVEKVDIIISEWMGYCLFYESMLNTVIFARDKWLKPGGLMFPDRAALYVVAIEDRQYKDFKIHWWENVYGFDMTCIRDVAMKEPLVDIVDPKQVVTNACLIKEVDIYTVKTEELSFTSAFCLQIQRNDYVHALVTYFNIEFTKCHKKMGFSTAPDAPYTHWKQTVFYLEDYLTVRRGEEIYGTISMKPNAKNVRDLDFTVDLDFKGQLCETSVSNDYKMR
Protein: Zinc finger protein 8 (P93751)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Probable transcription factor required for the initiation of inflorescence trichomes in response to gibberellin and cytokinin. Is not involved in the regulation of trichome branching. Is functionally equivalent to GIS2. Acts as negative regulator of abscisic acid (ABA) signaling during germination and early seedling development.
Subcellular location: Nucleus {ECO:0000250|UniProtKB:Q39261}.
Interaction partners:
- MYB-like transcription factor TCL2
- Transcription factor GLABRA 3
- MYB-like transcription factor TCL1
- Transcription factor MYB23
- Transcription factor EGL1
- Homeobox-leucine zipper protein GLABRA 2
- MYB-like transcription factor ETC2
- MYB-like transcription factor ETC1
- Transcription factor TRY
- Protein indeterminate-domain 11
Sequence:
MDETNGRRETHDFMNVNVESFSQLPFIRRTPPKEKAAIIRLFGQELVGDNSDNLSAEPSDHQTTTKNDESSENIKDKDKEKDKDKDKDNNNNRRFECHYCFRNFPTSQALGGHQNAHKRERQHAKRGSMTSYLHHHQPHDPHHIYGFLNNHHHRHYPSWTTEARSYYGGGGHQTPSYYSRNTLAPPSSNPPTINGSPLGLWRVPPSTSTNTIQGVYSSSPASAFRSHEQETNKEPNNWPYRLMKPNVQDHVSLDLHL
Protein: Rho GTPase activating protein 45 (F5H1R4)
Organism: Homo sapiens (Human)
Interaction partners:
Sequence:
MCICGTAHPVLDEGPVRCRAGPRDLLEARRPRAHECLGEALRVMHQIISKYPLLNTVETLTAAGTLIAKVKAFHYESNNDLEKQEFEKALETIAVAFSSTVSEFLMGEVDSSTLLAVPPGDSSQSMESLYGPGSEGTPPSLEDCDAGCLPAEEVDVLLQRCEGGVDAALLYAKNMAKYMKDLISYLEKRTTLEMEFAKGLQKIAHNCRQSVMQEPHMPLLSIYSLALEQDLEFGHSMVQAVGTLQTQTFMQPLTLRRLEHEKRRKEIKEAWHRAQRKLQEAESNLRKAKQGYVQRCEDHDKARFLVAKAEEEQAGSAPGAGSTATKTLDKRRRLEEEAKNKAEEAMATYRTCVADAKTQKQELEDTKVTALRQIQEVIRQSDQTIKSATISYYQMMHMQTAPLPVHFQMLCESSKLYDPGQQYASHVRQLQRDQEPDVHYDFEPHVSANAWSPVMRARKSSFNVSDVARPEAAGSPPEEGGCTEGTPAKDHRAGRGHQVHKSWPLSISDSDSGLDPGPGAGDFKKFERTSSSGTMSSTEELVDPDGGAGASAFEQADLNGMTPELPVAVPSGPFRHEGLSKAARTHRLRKLRTPAKCRECNSYVYFQGAECEECCLACHKKCLETLAIQCGHKKLQGRLQLFGQDFSHAARSAPDGVPFIVKKCVCEIERRALRTKGIYRVNGVKTRVEKLCQAFENGKELVELSQASPHDISNVLKLYLRQLPEPLISFRLYHELVGLAKDSLKAEAEAKAASRGRQDGSESEAVAVALAGRLRELLRDLPPENRASLQYLLRHLRRIVEVEQDNKMTPGNLGIVFGPTLLRPRPTEATVSLSSLVDYPHQARVIETLIVHYGLVFEEEPEETPGGQDESSNQRAEVVVQVPYLEAGEAVVYPLQEAAADGCRESRVVSNDSDSDLEEASELLSSSEASALGHLSFLEQQQSEASLEVASGSHSGSEEQLEATAREDGDGDEDGPAQQLSGFNTNQSNNVLQAPLPPMRLRGGRMTLGSCRERQPEFV
Protein: Potassium channel toxin gamma-KTx 1.10 (CmERG1) (C0HLM3)
Organism: Centruroides margaritatus (Central American bark Scorpion)
Function: Blocks human Kv11.1/KCNH2/ERG1 potassium channels (reversible, IC(50)=3.4 nM). At high toxin concentrations, block of Kv11.1/KCNH2/ERG1 macroscopic current is almost complete. Does not accelerate the kinetics of the closing process and has no effect on the activation and inactivation kinetics of the Kv11.1/KCNH2/ERG1 channels.
Subcellular location: Secreted {ECO:0000269|PubMed:34201318}.
Interaction partners:
Sequence:
DRDSCVDKSRCAKYGYFQECTDCCKKYGHNGGTCMFFKCKCA
Protein: Killer protein (Q88MI5)
Organism: Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440)
Interaction partners:
- Antidote protein
- BrnT family toxin
- Toxin-antitoxin system, higB toxin like
- Type II toxin-antitoxin system HicA family toxin
- Hexulose-6-phosphate isomerase
- PemI-like protein
- HtrA suppressor protein sohA
- Type II toxin-antitoxin system HigB family toxin
- Ribbon-helix-helix protein CopG domain-containing protein
- Excisionase domain protein
Sequence:
MIRSFSCADTEALFTTGKTRRGSDIKSVAERKLAMLDAATELRDLRSPPGNRLESLSGNRADQHSIRVNDQWRLCFTWTEHGPVNVEIVDYH
Protein: Proteasome subunit alpha type (Q57X58)
Organism: Trypanosoma brucei brucei (strain 927/4 GUTat10.1)
Subcellular location: Cytoplasm {ECO:0000256|RuleBase:RU000551}. Nucleus {ECO:0000256|RuleBase:RU000551}.
Interaction partners:
- Proteasome subunit beta
- Proteasome alpha 7 subunit
- Protease regulatory ATPase subunit 4
- Proteasome subunit alpha type
- Proteasome subunit beta
- Proteasome regulatory non-ATP-ase subunit 10
- Proteasome subunit beta
- Proteasome regulatory non-ATP-ase subunit 7
- Proteasome subunit beta
- Proteasome subunit alpha type
Sequence:
MSSRYDSRTTTFSPEGRLYQVEYAEEAISQAGTIIGILTTGGVVLGAERGQQHGLFDTENMEDRNISGEKVYKISNHLGCSVAGVTSDAYALINYARLSAARHFYSFQEPIAAEDLCRMVCDEKQLYTQYGGVRPFGVSFLFAGWDRHYGYQLYHTDASGNYSAWRAYAVGQNDQVAQSLLKRDWKPELTLEEGIVLCLRVLGKTMDAVKLTPERLEVAVLQRVQAPLTQKLLDPYGVNPKMVPSFKILTDEELKPHVDEANRQREAEEAEEAEKEKKNEKRLASP
Protein: D-lactate dehydrogenase (cytochrome) (EC 1.1.2.4) (Q9D635)
Organism: Mus musculus (Mouse)
Subcellular location: Mitochondrion {ECO:0000256|ARBA:ARBA00004173}.
Interaction partners:
Sequence:
MAMLLRVATQRLSPWRSFCSRGSQGGLSQDFVEALKAVVGSPHVSTASAVREQHGHDESMHRCQPPDAVVWPQNVDQVSRVASLCYNQGVPIIPFGTGTGVEGGVCAVQGGVCINLTHMDQITELNTEDFSVVVEPGVTRKALNTHLRDSGLWFPVDPGADASLCGMAATGASGTNAVRYGNMRDNVINLEVVLPDGRLLHTAGRGAITEECSGSISQTLCGSEGPGHHYINHPAPAPCAEATVAATCAFPSVQAAVDSTVQILQAAVPVARIEFLDDVMMDACNRHSKLNCPVAPTLFLEFHGSQQTLAEQLQRTEAITQDNGGSHFSWAKEAEKRNELWAARHNAWYAALALSPGSKAYSTDVCVPISRLPEILVETKEEIKASKLTGAIVGHVGDGNFHCILLVDPDDAEEQRRVKAFAENLGRRALALGGTCTGEHGIGLGKRQLLQEEVGPVGVETMRQLKNTLDPRGLMNPGKVL
Protein: InTestinal NeureXin-like (O45000)
Organism: Caenorhabditis elegans
Subcellular location: Membrane {ECO:0000256|ARBA:ARBA00004167}; Single-pass membrane protein {ECO:0000256|ARBA:ARBA00004167}.
Interaction partners:
- DEgenerin Linked to Mechanosensation
- DEgenerin Linked to Mechanosensation
- Col_cuticle_N domain-containing protein
- Col_cuticle_N domain-containing protein
- ShKT domain-containing protein
- Contactin rig-6
- SCP domain-containing protein
Sequence:
MWQLLVPLAVLLTVSGQSTDEISHERIFLKYPSSFVNFTSDNWKLTETDNQLIIAVKFQASSHIGQIFSVRFINPDGSLKALLTAGIAAGILQINLYDDKNTKILNKPMENSPINVHEHSLAVGLNTTARNLWYKLGADNDLNCEINQAIDISNTEVTVTIGGGSQSMIGCVSIVAVSAGESSPVSQGTPIAYQDIDECPKADACTTKDCNTGRCIQLEVPTCDCYGTEMAGPNCRLPAPTIQLRNNDENEESSAYLRYKPWEMDSHFSRLSMDFRFSDSDAKEGILVYGETSQGKIFKIYVVGTKGKVMLDTTNVADFELREDHSIFHSIIVKIVDGIFNMLVDDNVHRRAFNESDALVFDTIQFGAPIPTDVSEVGVTACVKNVYVDHVDIIELAVLTNDSRTTASRVRSCNNEDLTEFQGPSLFSADPLAEILVEDPSDIKSEFGESVIGADMFPVPSNKKPKTQPLSSCEKANAYMCQNGAGCKKESETEFTCFCKEGYIGKFCQFTTIPRSCAEAYDFLKLPNGATWVDVDGNRKLDPSVTMCTDGQTEIPHDMKPGYVVRDTTYQNHSLFVLSYRDFNSWQLAKYIKNSGSCSQTVNYRCNKAPLRFKEGKTWFKSVSNATEKIKQIGMLPNSCPCLDRGCQSGEKCNCDSGAISEDIGELTGRYSGICEVVTLFDEADVRAEMTISELKCSGYENEKPIRFTERTELKISDWTGESIDLQFRTTETPASLVTVQGNYGEKIISVSLTDGHTVQISNFEALKIIESQTKLNDSNWHHVLIELADGEIRVTVDATHVLMTIGDNAVLEGSVVLGGEGDGLIGCVRNVLINDEPVNLQEIVKTSEKTGITETCDTRCTADFCQNGAKCYEDFVSGMPFCQCAFPDVHSGVNCEIDINTNSSVSFHGGYLKFDDVKNVLNAPIYFSFRTDRTHALLFFAHDQNNNFLQVHLSEEVNVTLTLNNLDIVSQCTVRAQPGTEYGDMRWIQVAITHDSKSSQLQVDDAACTIRTSRVLSEIPITRLLDVYNSELVGMPVGLAAPVKPNPYTFTFIGNVNTGEKTNGKRLLFSDCLPRRRSPSIFLMLIFPDGSFILAPKYESPIPRFYGCIRGFQINREMIDMREKTEHLATSEMYEAYGPALVKVGCEVGCSSITCLNGGHCSVAWANTDPSAATTTCDCSRTSYTGASCSLDEGVHMERSGFIEFDISKEMARYVFIEQNSKIPQLLKFAFSSSPEIVLKDKSMLALVVFREKQKLEIEINPNRTINVAITYENGKSDVLNFVGDFLDGYRHFVVVQTNQASATAVMIDSLRQDFEYRGKDKNIDLFNAERIRIGGGPRDRYTETDGYLKAGYTGCISNFIVDYQRGSSLTYKPITYFANPTHHLSKLIMTNRIVLGGCAAFEVPNSLPVYQNRVKFPVWDTEFRRFVYFRDVEPLNDNNDTEWTDEDSGSLMWVVFIIFVLGVIFLIIFCIFMKCCREKIHARDDEYLHDEDIPLHMAPTILRHPQPSPPPIKKSAASNYKIPNPNIDFNKENTFDYDDEDEFAGIADDNVTDDVTVRNEVDDSDNETIRHIDDEVQDEDGMVIVSRPTQVSHLPQRVSSFRTGDPTAPKDSPLYSNIRPPTSPIHASVPVPPPRMSNNSPFA
Protein: V protein (F8V2V1)
Organism: Mumps orthorubulavirus (MuV)
Interaction partners:
Sequence:
MDQFIKQDETGDLIETGMNVANHFLSAPIQGTNLLSKATIIPGVAPVLIGNPEQKNIQYPTASHQGSKSKGRSSGAKPIIVSSSEVGTGGTQIPEPLFAQTGQGGTVTTVYQDPTIQPTGSYRSVELAKIGKERMINRFVEKPRTSTPVTEFKRGAGSGCSRPDNPRGGHRREWSLSWVQGEVRVFEWCNPICSPITAAARFHSCKCGNCPAKCDQCERDYGPP
Protein: Putative phagocytic receptor 1c (Q7YTA6)
Organism: Dictyostelium discoideum (Social amoeba)
Subcellular location: Membrane {ECO:0000305}; Multi-pass membrane protein {ECO:0000305}.
Interaction partners:
Sequence:
MLNIIVVLLLLFFSNNVIDSRYISYSKPNYYKTNDKIPVYMNNVRSGLSIFDYYKYPFPKPSTIEYKQSFMSKLAGDLNSTSLYDEVSLHTSVDCIALGKPINYTLDDVNQLKYLIDKHFRINFFIDDLPIGELFKNNRLVEYNNSNSKSSEITSPPSSPSSSSSSSSSPSSSIEEEDDDDTENDHIYLGHPIGFKYNSKYYLYNHLIIIINSTSTKSDKGFYTIKSVNVEPYSCVDCKIDSGIGGVEISPELFDDDKIKQLTIQYTYSIRNHETTTTNSGKSFQSWSIYYVNQFKLSNIDIIMSFIIVLAVSACLAIILLKIFRKTNSKTYTQLSPDDGGWKSIYADVFRSPNNFMTFSIIIGFGVQIVASLFILMVFSVAGLTSIATPGGMAIASILIFSFTGIFNGYSSMRTYIMLGGTRKLYNSVITTTLIPFTILLLMFIGYFQVWSNKFTYGASIGTVFFILAMWLLVCVPCSLLSSYFVRTWPPAEYPVRINPIPRFIPTAKWYQNQYLHMILGGIIPFVIIFTDLSFFLSSWVLGEHYSYSLSFALTFILMIISIVETNMIIEYYQLSLENYNWWWRSLLGPMVTGLYTFIYFIYFGITRIETEGVGFYYFMFSLVFSILVSLFCSSIGFLGNLWFTKKIYSTLHFD
Protein: Cell adhesion molecule 4 (Zgc:101704) (B0CLV3)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Subcellular location: Membrane {ECO:0000256|ARBA:ARBA00004479}; Single-pass type I membrane protein {ECO:0000256|ARBA:ARBA00004479}.
Interaction partners:
- Cell adhesion molecule 3.
Sequence:
MMMAFSSVWKYWAPLPLLLLLYSHTARGQAVQAENVTVLEGGTAQISCRLQNYDGSIVVIQNPRRQTLFFNGTRALKDDRFQMVLFTPKLVRITLTNVSVSDEGGYFCQLYTDDTHHQVATLSVVVPPEVPSVEVKTEAVEGGEVELTCLSLRSKPPATLRWVRDRREIPGVISQQENGKTVSVSNTIRIPVERKDNRAALSCEASHPALVSQKRVRHYSLDVHFAPTVKIVPPQGILREGDSLSLTCSVTGNPLPRDIQWSRVNDTLPERAEKTGNILHMSRLSQSHNGTYLCQAHNNYGRAADHYTLLVYVSVAQSHPAIAHPNLPSSKEYQDPGAVVETHSAVPFAVIGGILALLVFTVICVLIVTIWCSVRQKGSYLTHEASGLDEHGEVQEAFLNGNDASQGKKEYLL
Protein: Small ribosomal subunit protein uS13m (37S ribosomal protein SWS2, mitochondrial) (Sick without securin protein 2) (P53937)
Organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Function: Component of the mitochondrial ribosome (mitoribosome), a dedicated translation machinery responsible for the synthesis of mitochondrial genome-encoded proteins, including at least some of the essential transmembrane subunits of the mitochondrial respiratory chain. The mitoribosomes are attached to the mitochondrial inner membrane and translation products are cotranslationally integrated into the membrane.
Subcellular location: Mitochondrion {ECO:0000269|PubMed:10649453, ECO:0000269|PubMed:14562095}. Note=Mitoribosomes are tethered to the mitochondrial inner membrane and spatially aligned with the membrane insertion machinery through two distinct membrane contact sites, formed by the 21S rRNA expansion segment 96-ES1 and the inner membrane protein MBA1. {ECO:0000269|PubMed:25609543}.
Interaction partners:
- Small ribosomal subunit protein uS9m
- Small ribosomal subunit protein uS14m
- Small ribosomal subunit protein bS16m
- Small ribosomal subunit protein uS19m
- Small ribosomal subunit protein bS6m
- Small ribosomal subunit protein uS10m
- Small ribosomal subunit protein uS5m
- Small ribosomal subunit protein bS18m
- Small ribosomal subunit protein uS7m
- Small ribosomal subunit protein uS2m
Sequence:
MVVHILGKGFKGKEVIKIALASKFYGIGKTTAEKICSKLGFYPWMRMHQLSEPQIMSIASELSTMTIEGDARAIVKDNIALKRKIGSYSGMRHTLHLPVRGQHTRNNAKTARKLNKIDRRGIHTFSQAKVQHNPSLWSCIFGK
Protein: DNA-directed RNA polymerase subunit (EC 2.7.7.6) (Q26791)
Organism: Trypanosoma brucei
Interaction partners:
Sequence:
MSGGAALPVSQMELHKVNEVQFEIFKERQIKSYAVCLVEHAKSYERGRPVRGGINDLRMGTTDFEFACETCHRKHPECPGHFGYIELAEPVFNIGVFDLVLLVLKCVCKTCGALLLNTREQDVHKKLQHMTGLNRLRQVAKMAEAKCRVSTSTEDDMGIDGFDSAPFNGGSGMGPGATRGCGASQPRVSRFYGIYPTLVIKAVHEEQDAEWHADKVRQVLDRVSDDDARLMGFDPQRCHPRDLVLTVLPVPPPQVRPAISFGGLRSDDELTHQIMSIVKRNNQLRRDKESDVQAAIDRSRALLQEHVATYFNNASTYYKPTKVNDTKKLKSLTERLKGKYGRLRGNLMGKRVDFSARTVITGDPNIDVDEVGVPFSVAMTLTFPERVNTVNKKRLTEFARRTVYPSANYIHHPNGTITKLALLRDRSKVTLNIGDVVERHVINGDVVLFNRQPTLHRMSMMGHRVRVLNYNTFRLNLSCTTPYNADFDGDEMNLHVPQSLLTKAELIEMMMVPKNFVSPNKSAPCMGIVQDSLLGSYRLTDKDTFLDKYFVQSVALWLDLWQLPIPAILKPRPLWTGKQVFSLILPEVNHPATPQDRPPFPHNDSVVMIRRGQLLCGPITKSIVGAAPGSLIHVIFNEHGSDEVARFINGVQRVTTFFLLNFGFSVGVQDTVADSDTLRQMNDVLVKTRRNVEKIGAAANNRTLNRKAGMTLLQSFEADVNSALNKCREEAAKKALSNVRRTNSFKVMIEAGSKGTDLNICQIAVFVGQQNVAGSRIPFGFRRRTLPHFMLDDYGETSRGMANRGYVEGLKPHEFFFHTMAGREGLIDTAVKTSDTGYLQRKLIKALEDVHAAYDGTVRNANDELIQFMYGEDGLDGARIEGGQLFPLPFRDDKEMEDTYKYEYDVDGTFSGKVGGNYMDPHVRKMLRADPQNVRKLQEEYEQLTADREWSRKMLDLEDRDKLKLNLPVNPGRLIQNARSTMGKRSQVSNLSPITIIDHVRKLQEDLMKLFPSYHRGGDGYIRNTLSRERIESALTLFNVHLRQLLASKRVLKEYKLNDRAFEYLLKEIRTKYHQSLTTPGENIGAIAAQSCGEPATQMTLNTFHNAGISSKNVTLGVPRLLELLNVSRNQKHASMTVSLFPPYDEKRNAQKAQHLIEYCTLESITRRIQFIYDPDPRHTVVEADRDILELEWNVMDESDAELRIQEVVAGSPWVVRLELDVDMVTDKALDMKDVKQAILRVDESYIIETGMANNVRQRTIRMRSRYNEGADSIPKLKREIPALLARVHLRGIPGVRRALLKDTTEFTVDQATGKMSGNKIWAIDTDGTALRRAFIGVVGEDGKNIINAVKTSSNKVPEVCSLLGIEAARSKMLTELREAYLAYGLNINYRHYTILVDTICQHGYLMAVSRSGINRSDTSGPLMRCSFEETVKVLMAAASFGECDPVRGVSANLVLGNQARVGTGLFDLVLNMAALQQAVPQAEAVAPGKDVNVYHSLGSTLQQNIQSSIAYRPRDHDATPFVNNASLFLRQGFGGGSSSAPVTASAPYNPSTTYHGGRLEASAVHRSQAYSTSPALEYGGREASASQMYSVMSSASAFNPVSTRMSSVAHSYSEYSEASSYHLQHSVAPTSMQASLPRTDNSMTMQGIGSVSVPYTPHAMSSAAPPSQVYASTEVGRSHSEDSRSQSALYVPTLSPTHAGYAIRGDEPSTHRSDSNVMWREAGGGREQDEEDDLSTNYMPTAKTPQQAAPPTAAEFGDEEEEEQ