wanglab/gogpt-training-data huggingface dataset:
Protein: CD166 antigen homolog A (Activated leukocyte cell adhesion molecule A) (DM-GRASP homolog) (Neurolin) (CD antigen CD166) (Q90460)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Function: Cell adhesion molecule that mediates both heterotypic cell-cell contacts via its interaction with CD6, as well as homotypic cell-cell contacts. Promotes T-cell activation and proliferation via its interactions with CD6 (By similarity). Contributes to the formation and maturation of the immunological synapse via its interactions with CD6 (By similarity). Mediates homotypic interactions with cells that express ALCAM. Mediates attachment of dendritic cells onto endothelial cells via homotypic interaction. Inhibits endothelial cell migration and promotes endothelial tube formation via homotypic interactions. Required for normal organization of the lymph vessel network. Required for normal hematopoietic stem cell engraftment in the bone marrow. Plays a role in hematopoiesis; required for normal numbers of hematopoietic stem cells in bone marrow. Promotes in vitro osteoblast proliferation and differentiation (By similarity). Promotes neurite extension, axon growth and axon guidance; axons grow preferentially on surfaces that contain ALCAM (By similarity). Mediates outgrowth and pathfinding for retinal ganglion cell axons (By similarity).
Subcellular location: Cell membrane {ECO:0000250|UniProtKB:Q61490}; Single-pass type I membrane protein {ECO:0000250|UniProtKB:Q61490}. Cell projection, axon {ECO:0000269|PubMed:8026643, ECO:0000269|PubMed:8089660}. Cell projection, dendrite {ECO:0000250|UniProtKB:Q61490}. Note=Detected at the immunological synapse, i.e, at the contact zone between antigen-presenting dendritic cells and T-cells. Colocalizes with CD6 and the TCR/CD3 complex at the immunological synapse. {ECO:0000250|UniProtKB:Q13740}.
Interaction partners:
- Myosin light chain 2 Mlc2a
- Versican core protein
Sequence:
MHSVICLFGAFIAAALFAPGSCLPTVIGLYGETIEVPCNNGNNKPDGLIFTKWKYAKDDGSPGDLLIKQAQKDDPTVSAMDGYKTRVSIAANSSLLIAQGSLTDQRVFTCMVVSSTNLEEFSVEVKVHKKPSAPVIKNKVKELENGKLTQLGECVVESANPAADLIWMKNNQALVDDGKTIIITSDVTKDPVTGLSSTSSRLQYTARKEDVASQFTCVAKHVTGPNQVSTPDTFQIRYPTEKVSLQVVSQSPIREGDDVTLKCQADGNPPPTSFNFNIKGKKVTVTDKDVYTLTGVTRADSGVYKCSLLDNDVMESTQIVTVSFLDASLTPTGKVLKKLGENLVVSLEKNASSEVKVTWTKDNRKLDKLPDFSQLRYSDAGLYVCDVSIEGIKHSFSFELTVEGGPRITGLTKHRSNDGKHKVLTCEAEGSPKPEVQWSVNGTDDETSYVNGKATYKLTVVPSKNLTVSCLVTNKLGFDTKDISVFSLFEEDKPKPGKNEDGADQAKVIVGVVVGLFLAAALVGLIYWLYIKKTRQGSWKTGEKETGTSEESKKLEENNHKADV
Protein: MBL fold metallo-hydrolase (P96859)
Organism: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Interaction partners:
- Possible arsenical pump integral membrane protein ArsB2
- Possible conserved lipoprotein LppH
Sequence:
MPTARSDAPLSVTWMGVATLLVDDGSSALMTDGYFSRPGLARVAAGKVSPSAERVDGCLARANVSRLTAVIPVHTHIDHAMDSALVADRTGAQLVGGESAANVGRGYGLPEESLVVAVPGEPIQLGAFDVTLVESHHCPPDRFPGVISAPLTPPVKASAYRCGEAWSTLVHHRPSGRRLLIQDSAGFVSGALAGYRADAAYLSVGQLGLQPPSYLLEYWTETVRTVGVRRVILIHWDDFFRPLSKPLRALPYAADDLDLSIRILDELAAQDGVALQMPTVWRREDPWM
Protein: Translocon-associated protein subunit gamma (Signal sequence receptor subunit gamma) (Q9VL69)
Organism: Drosophila melanogaster (Fruit fly)
Subcellular location: Endoplasmic reticulum membrane {ECO:0000256|ARBA:ARBA00004477}; Multi-pass membrane protein {ECO:0000256|ARBA:ARBA00004477}.
Interaction partners:
- Translocon-associated protein subunit delta
- Translocon-associated protein subunit beta
- Protein transport protein Sec61 subunit beta
- Translocon-associated protein subunit alpha
- Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit
- DSec61alpha
- Protein transport protein Sec61 gamma-2 subunit
- LD33138p
- dolichyl-diphosphooligosaccharide--protein glycotransferase
- Signal peptidase complex subunit 2
Sequence:
MGSGKQQKVQSSGFTKEEELLLQDFSRNVSTKSSALFYGNAFIVSAVPIWLFWRIHNMDLWPSSILFVLVTAASTYLMATAYKNIKFQLKHKIAGRREEAVTREVNRQVGDDKKVTRKEKDERILWKKNEVADYEATTFSIFYNNAIYLAVIIFISFFILKNSTPFINYIFSVGIASGALSLFSTSAQTN
Protein: BHLH-transcription factor (Os09g0474100 protein) (cDNA clone:J023133H05, full insert sequence) (Q69JJ6)
Organism: Oryza sativa subsp. japonica (Rice)
Subcellular location: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
Interaction partners:
Sequence:
MDMSESSEKGMESNASSGPGNGIPVEWQSQFSSAFACQPSVAAQHQQHAMMDSFAAASAGLWASSDVVSAMSSAAPPRGAGFLAPVPGFLQQGLGHFPVDSGFIERAARSTCFGGGMMAGGPYGAADQAMGDAFGGTAEGLMDHHRNVGNDKAEEFAGNGHDEVPSSEVAGGDCSSKGSDSKKRRRPNEVMGTDQVHSSNLPSDSANESVHSKDKGEESSPATTNGGKSKGKGAKETSESQKEEYIHVRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDLNIEGLLSKDLLRFPGVPSSSIGFSPEMMHPQLQLSQPGLIHGGTAGMANPDVFRRIIQAQLGAKDGSQMPHSLNGSFSDVSQMAYPSLGSQDLSIRPSQDGFQM
Protein: SIM bHLH transcription factor 1 (E1C5G3)
Organism: Gallus gallus (Chicken)
Subcellular location: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
Interaction partners:
- Aryl hydrocarbon receptor nuclear translocator 2.
- Orthopedia homeobox
- Melanocortin receptor 4
- Pro-thyrotropin-releasing hormone
- NK2 homeobox 2
- Uncharacterized protein.
- Agouti-related protein
Sequence:
MKEKSKNAARTRREKENSEFYELAKLLPLPSAITSQLDKASIIRLTTSYLKMRVVFPEGLGEAWGHSSRTSPLDNVGRELGSHLLQTLDGFIFVVAPDGKIMYISETASVHLGLSQVELTGNSIYEYIHPADHDEMTAVLTAHQPYHSHFVQEYEIERSFFLRMKCVLAKRNAGLTCGGYKVIHCSGYLKIRQYSLDMSPFDGCYQNVGLVAVGHSLPPSAVTEIKLHSNMFMFRASLDMKLIFLDSRVAELTGYEPQDLIEKTLYHHVHGCDTFHLRCAHHLLLVKGQVTTKYYRFLAKHGGWVWVQSYATIVHNSRSSRPHCIVSVNYVLTDTEYKGLQLSLDQVTATKPAFSYANSTPTITDNRKGSKSRLSSTKSKSRTSPYPQYSGFHTERSESDHESQWGGSPLTDTASPQLLEPTDRPSSQHHDVSCAYRQYSDRSALCYGFALDHSRLGDDRHFHTQACEGGRCEAGRYFLGTPQPGREGWWGSRSALPLTKSSPESREAYENSMPHITSVHRIHGRGHWDEDSVVSSPDPGSASESGDRYRAEQYQSSPHEPSKIETLIRATQQMIKEEENRLQLRKTTPDPLISINGTGKKHTICFANYPQQQLAGDICRVPTVANTPPCEHIQQRDGKIMSPHENDYDNSPTTLSRISSPNSDRISKSSLVLAKDYLNTDMSPHQTPGDHPAASPNYYNSHRQYFDKHAYTLTGYALEHLYDTEAIRNYSLGCNGSHFDVTSHLRMQQDPAQGHKGTSVIITNGS
Protein: Transactivator/viroplasmin protein (Tav) (Inclusion body matrix protein) (P16666)
Organism: Cauliflower mosaic virus (strain Bari 1) (CaMV)
Function: Enhances the ribosomal termination-reinitiation event leading to the translation of major open reading frames on the polycistronic viral RNAs.
Subcellular location: Host cytoplasm. Note=Found in cytoplasmic occlusion bodies.
Interaction partners:
Sequence:
MEDIEKLLLQEKILMLELDLVRAKISLARAKGSMQQGGNSLHRETPVKEEAVHSALATFAPIQAKAIPEQTAPGKESTNPLMVSILPKDMKSVQTEKKRLVTPMDFLRPNQGIQIPQKSEPNSSVAPNRAESGIQHPHSNYYVVYNGPHAGIYDDWGSAKAATNGVPGVAHKKFATITEARAAADVYTTAQQAERLNFIPKGEAQLKPKSFVKALTSPPKQKAQWLTLGVKKPSSDPAPKEVSFDQETTMDDFLYLYDLGRRFDGEGDDTVFTTDNESISLFNFRKNANPEMIREAYNAGLIRTIYPSNNLQEIKYLPKKVKDAVKKFRTNCIKNTEKDIFLKIKSTIPVWQDQGLLHKPKHVIEIGVSKKIVPKESKAMESKDHSEDLIELATKTGEQFIQSLLRLNDKKKIFVNLVEHDTLVYSKNTKETVSEDQRAIETFQQRVITPNLLGFHCPSICHFIKRTVEKEGGAYKCHHCDKGKAIVQDASADSKVADKEGPPLTTNVEKEDVSTTSSKASG
Protein: I[[h]] channel, isoform I (A1Z9P0)
Organism: Drosophila melanogaster (Fruit fly)
Subcellular location: Cell membrane {ECO:0000256|ARBA:ARBA00004651}; Multi-pass membrane protein {ECO:0000256|ARBA:ARBA00004651}.
Interaction partners:
Sequence:
MPNIPIVSEKVSANFLKSQLQSWFQPTDNRLAMKLFGSRKALVKERIRQKTSGHWVIHPCSSFRFYWDLCMLLLLVANLIILPVAISFFNDDLSTRWIAFNCLSDTIFLIDIVVNFRTGIMQQDNAEQVILDPKLIAKHYLRTWFFLDLISSIPLDYIFLIFNQDFSDSFQILHAGRALRILRLAKLLSLVRLLRLSRLVRYVSQWEEVYFLNMASVFMRIFNLICMMLLIGHWSGCLQFLVPMLQGFPSNSWVSINELQESYWLEQYSWALFKAMSHMLCIGYGRFPPQSLTDMWLTMLSMISGATCYALFLGHATNLIQSLDSSRRQYREKVKQVEEYMAYRKLPRDMRQRITEYFEHRYQGKFFDEELILGELSEKLREDVINYNCRSLVASVPFFANADSNFVSDVVTKLKYEVFQPGDIIIKEGTIGTKMYFIQEGVVDIVMANGEVATSLSDGSYFGEICLLTNARRVASVRAETYCNLFSLSVDHFNCVLDQYPLMRKTMETVAAERLNKIGKNPNIMHQKDEQLSNPESNTITAVVNALAAEADDCKDDDMDLKENLLHGSESSIAEPVQTIREGLPRPRSGEFRALFEGNTP
Protein: Inactive sodium-dependent neutral amino acid transporter B(0)AT3 (Sodium- and chloride-dependent transporter XTRP2) (Solute carrier family 6 member 18) (System B(0) neutral amino acid transporter AT3) (Q96N87)
Organism: Homo sapiens (Human)
Function: Does not show neutral amino acid transporter activity.
Subcellular location: Membrane {ECO:0000305}; Multi-pass membrane protein {ECO:0000255}.
Interaction partners:
- Proton-coupled amino acid transporter 2
Sequence:
MAHAPEPDPAACDLGDERPKWDNKAQYLLSCTGFAVGLGNIWRFPYLCQTYGGGAFLIPYVIALVFEGIPIFHVELAIGQRLRKGSVGVWTAISPYLSGVGLGCVTLSFLISLYYNTIVAWVLWYLLNSFQHPLPWSSCPPDLNRTGFVEECQGSSAVSYFWYRQTLNITADINDSGSIQWWLLICLAASWAVVYMCVIRGIETTGKVIYFTALFPYLVLTIFLIRGLTLPGATKGLIYLFTPNMHILQNPRVWLDAATQIFFSLSLAFGGHIAFASYNSPRNDCQKDAVVIALVNRMTSLYASIAVFSVLGFKATNDYEHCLDRNILSLINDFDFPEQSISRDDYPAVLMHLNATWPKRVAQLPLKACLLEDFLDKSASGPGLAFVVFTETDLHMPGAPVWAMLFFGMLFTLGLSTMFGTVEAVITPLLDVGVLPRWVPKEALTGLVCLVCFLSATCFTLQSGNYWLEIFDNFAASPNLLMLAFLEVVGVVYVYGMKRFCDDIAWMTGRRPSPYWRLTWRVVSPLLLTIFVAYIILLFWKPLRYKAWNPKYELFPSRQEKLYPGWARAACVLLSLLPVLWVPVAALAQLLTRRRRTWRDRDARPDTDMRPDTDTRPDTDMRPDTDMR
Protein: Iodotyrosine deiodinase 1 (IYD-1) (EC 1.21.1.1) (Iodotyrosine dehalogenase 1) (Q6PHW0)
Organism: Homo sapiens (Human)
Function: Catalyzes the dehalogenation of halotyrosines such as 3-bromo-L-tyrosine, 3-chloro-L-tyrosine, 3-iodo-L-tyrosine and 3,5-diiodo-L-tyrosine. During thyroid hormone biosynthesis, facilitates iodide salvage by catalysing the oxidative NADPH-dependent deiodination of the halogenated by-products of thyroid hormone production, monoiodotyrosine (L-MIT) and diiodotyrosine (L-DIT). The scavanged iodide can then reenter the hormone-producing pathways. Acts more efficiently on 3-iodo-L-tyrosine than 3,5-diiodo-L-tyrosine.
Subcellular location: Cell membrane {ECO:0000269|PubMed:15289438}; Single-pass membrane protein {ECO:0000269|PubMed:15289438}. Cytoplasmic vesicle membrane {ECO:0000269|PubMed:15289438}.
Interaction partners:
- Dual oxidase maturation factor 2
- Dual oxidase 2
- Sodium/iodide cotransporter
- Pendrin
- Riboflavin kinase
- Methionine aminopeptidase 1D, mitochondrial
- Thyroid peroxidase
- Adrenodoxin, mitochondrial
- Ferredoxin-2, mitochondrial
- Corrinoid adenosyltransferase MMAB
Sequence:
MYFLTPILVAILCILVVWIFKNADRSMEKKKGEPRTRAEARPWVDEDLKDSSDLHQAEEDADEWQESEENVEHIPFSHNHYPEKEMVKRSQEFYELLNKRRSVRFISNEQVPMEVIDNVIRTAGTAPSGAHTEPWTFVVVKDPDVKHKIRKIIEEEEEINYMKRMGHRWVTDLKKLRTNWIKEYLDTAPILILIFKQVHGFAANGKKKVHYYNEISVSIACGILLAALQNAGLVTVTTTPLNCGPRLRVLLGRPAHEKLLMLLPVGYPSKEATVPDLKRKPLDQIMVTV
Protein: Small ribosomal subunit protein uS2B (40S ribosomal protein S0-B) (Q9P546)
Organism: Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Function: Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA-precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.
Subcellular location: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_03015, ECO:0000269|PubMed:16823372}.
Interaction partners:
- Small ribosomal subunit protein uS3
- Small ribosomal subunit protein uS10
- Elongation factor 3
- Small ribosomal subunit protein uS5
- Small ribosomal subunit protein eS7
- mRNA export factor elf1
- Small ribosomal subunit protein uS15
- Elongation factor 1-gamma
- Small ribosomal subunit protein uS14
- Small ribosomal subunit protein eS21
Sequence:
MAESIARPSVLNATDDDIKNLLAADSHIGSKNLEVRMENYVWKRRSDGIHIINLGKTWEKLVLAARVIATIENPADVCVISSRPYGHRAVLKFAAHTGATAIAGRFTPGNFTNYITRTYREPRLIIVTDPRADAQAIKEASFVNIPVIALCDTDSILNHVDVAIPINNKGYKSIGLAWYLLAREVLRLRGNISRTTAWEVMPDLYFYRDPEEIEREEEQKAAAAAAAEEEAQLAAQTAAAEFEVTDSAAGTVDPTILDNATAGQVGQTTWEGDAEWNITGAAPSEWA
Protein: Probable E3 ubiquitin-protein ligase HERC6 (EC 2.3.2.26) (HECT domain and RCC1-like domain-containing protein 6) (HECT-type E3 ubiquitin transferase HERC6) (Q8IVU3)
Organism: Homo sapiens (Human)
Function: E3 ubiquitin-protein ligase which accepts ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates.
Subcellular location: Cytoplasm, cytosol {ECO:0000269|PubMed:15676274}.
Interaction partners:
- Ubiquitin-like protein ISG15
- Interferon-induced protein 44
- S-adenosylmethionine-dependent nucleotide dehydratase RSAD2
- Probable ATP-dependent RNA helicase DDX60
- Ubl carboxyl-terminal hydrolase 18
- 2'-5'-oligoadenylate synthase 2
- 2'-5'-oligoadenylate synthase 3
- Interferon-induced GTP-binding protein Mx1
- Interferon-induced protein 44-like
- Antiviral innate immune response effector IFIT1
Sequence:
MYFCWGADSRELQRRRTAGSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFGHGPSDTSKPTHPEALTENFDISCLISAEDFVDVQVKHIFAGTYANFVTTHQDTSSTRAPGKTLPEISRISQSMAEKWIAVKRRSTEHEMAKSEIRMIFSSPACLTASFLKKRGTGETTSIDVDLEMARDTFKKLTKKEWISSMITTCLEDDLLRALPCHSPHQEALSVFLLLPECPVMHDSKNWKNLVVPFAKAVCEMSKQSLQVLKKCWAFLQESSLNPLIQMLKAAIISQLLHQTKTEQDHCNVKALLGMMKELHKVNKANCRLPENTFNINELSNLLNFYIDRGRQLFRDNHLIPAETPSPVIFSDFPFIFNSLSKIKLLQADSHIKMQMSEKKAYMLMHETILQKKDEFPPSPRFILRVRRSRLVKDALRQLSQAEATDFCKVLVVEFINEICPESGGVSSEFFHCMFEEMTKPEYGMFMYPEMGSCMWFPAKPKPEKKRYFLFGMLCGLSLFNLNVANLPFPLALYKKLLDQKPSLEDLKELSPRLGKSLQEVLDDAADDIGDALCIRFSIHWDQNDVDLIPNGISIPVDQTNKRDYVSKYIDYIFNVSVKAVYEEFQRGFYRVCEKEILRHFYPEELMTAIIGNTDYDWKQFEQNSKYEQGYQKSHPTIQLFWKAFHKLTLDEKKKFLFFLTGRDRLHARGIQKMEIVFRCPETFSERDHPTSITCHNILSLPKYSTMERMEEALQVAINNNRGFVSPMLTQS
Protein: Low molecular weight phosphotyrosine protein phosphatase (PTPase) (EC 3.1.3.48) (Low molecular weight cytosolic acid phosphatase) (EC 3.1.3.2) (P40347)
Organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Function: Acts on tyrosine phosphorylated proteins, low-MW aryl phosphates and natural and synthetic acyl phosphates.
Subcellular location: Cytoplasm {ECO:0000269|PubMed:7629177}.
Interaction partners:
- Flavin adenine dinucleotide synthase
- Acid phosphatase PHO12
- Repressible alkaline phosphatase
- Riboflavin kinase
- Thiamine biosynthetic bifunctional enzyme
- Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase THI20
- Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase THI21
- Thiamine pyrophosphokinase
- Riboflavin synthase
- Constitutive acid phosphatase
Sequence:
MTIEKPKISVAFICLGNFCRSPMAEAIFKHEVEKANLENRFNKIDSFGTSNYHVGESPDHRTVSICKQHGVKINHKGKQIKTKHFDEYDYIIGMDESNINNLKKIQPEGSKAKVCLFGDWNTNDGTVQTIIEDPWYGDIQDFEYNFKQITYFSKQFLKKEL
Protein: Protein artemis (EC 3.1.-.-) (DNA cross-link repair 1C protein) (Protein A-SCID) (SNM1 homolog C) (hSNM1C) (SNM1-like protein) (Q96SD1)
Organism: Homo sapiens (Human)
Function: Nuclease involved in DNA non-homologous end joining (NHEJ); required for double-strand break repair and V(D)J recombination. Required for V(D)J recombination, the process by which exons encoding the antigen-binding domains of immunoglobulins and T-cell receptor proteins are assembled from individual V, (D), and J gene segments. V(D)J recombination is initiated by the lymphoid specific RAG endonuclease complex, which generates site specific DNA double strand breaks (DSBs). These DSBs present two types of DNA end structures: hairpin sealed coding ends and phosphorylated blunt signal ends. These ends are independently repaired by the non homologous end joining (NHEJ) pathway to form coding and signal joints respectively. This protein exhibits single-strand specific 5'-3' exonuclease activity in isolation and acquires endonucleolytic activity on 5' and 3' hairpins and overhangs when in a complex with PRKDC. The latter activity is required specifically for the resolution of closed hairpins prior to the formation of the coding joint. Also required for the repair of complex DSBs induced by ionizing radiation, which require substantial end-processing prior to religation by NHEJ.
Subcellular location: Nucleus {ECO:0000269|PubMed:12055248, ECO:0000269|PubMed:15071507}.
Interaction partners:
- DNA-dependent protein kinase catalytic subunit
- X-ray repair cross-complementing protein 5
- X-ray repair cross-complementing protein 6
- DNA ligase 4
- Non-homologous end-joining factor 1
- DNA repair protein XRCC4
- Serine-protein kinase ATM
- DNA mismatch repair protein Msh2
- DNA excision repair protein ERCC-5
- DNA excision repair protein ERCC-1
Sequence:
MSSFEGQMAEYPTISIDRFDRENLRARAYFLSHCHKDHMKGLRAPTLKRRLECSLKVYLYCSPVTKELLLTSPKYRFWKKRIISIEIETPTQISLVDEASGEKEEIVVTLLPAGHCPGSVMFLFQGNNGTVLYTGDFRLAQGEAARMELLHSGGRVKDIQSVYLDTTFCDPRFYQIPSREECLSGVLELVRSWITRSPYHVVWLNCKAAYGYEYLFTNLSEELGVQVHVNKLDMFRNMPEILHHLTTDRNTQIHACRHPKAEEYFQWSKLPCGITSRNRIPLHIISIKPSTMWFGERSRKTNVIVRTGESSYRACFSFHSSYSEIKDFLSYLCPVNAYPNVIPVGTTMDKVVEILKPLCRSSQSTEPKYKPLGKLKRARTVHRDSEEEDDYLFDDPLPIPLRHKVPYPETFHPEVFSMTAVSEKQPEKLRQTPGCCRAECMQSSRFTNFVDCEESNSESEEEVGIPASLQGDLGSVLHLQKADGDVPQWEVFFKRNDEITDESLENFPSSTVAGGSQSPKLFSDSDGESTHISSQNSSQSTHITEQGSQGWDSQSDTVLLSSQERNSGDITSLDKADYRPTIKENIPASLMEQNVICPKDTYSDLKSRDKDVTIVPSTGEPTTLSSETHIPEEKSLLNLSTNADSQSSSDFEVPSTPEAELPKREHLQYLYEKLATGESIAVKKRKCSLLDT
Protein: ABC transporter, putative (Q586N6)
Organism: Trypanosoma brucei brucei (strain 927/4 GUTat10.1)
Interaction partners:
Sequence:
MHARINIRNAVFVPLGISICAAAVVIAARALLRERARPAVLLDCERKAYEILEMLTRATIKTDGHDSKQTECKDDASIAIFLNCNGVESIHVRTLVFNHNIMQLPSVFAVHCGLMKNSHPDHLLVCDIWNCLMALMNCSIRDILLDDGVALCILDDVKAEEVLALCMLLRGKYSIARYPPAAQADVVVQEFPEELYLGLITAYNRKRSLQSGITSFWKLMCSSCSIPQLVTLAATVLFSPEVILKCILGMHAFVHWRPIYAAEIGKSLNGDVSPKLSPFRFIIKQLMGLPATFVSMAVASTFAFESLYCIRGFVIQSILSDIITSIHIDAYLALATADYDPSDDWLLSRCVSQALWQASGSVMDELQSRVPALLEVMHGCRVVFSFPVVSLVMWLGTQWSNFLYFLNESLYMESQFTKSQLASVTNIATSTYAGNGEENQVSPTCSFPVQNSLTSSPLTLLQKQKDDGIKCMLSSTDNKMLFQQTFSHPSRHDKSSVQYGLVLFSMVFVESGRPLGYMWDLLTQHVIWPLVPSVFSGCVVDALKRKLQAGGHTCAVSVRRLGWIKDVIQNSPRPATASPSTCVWQCRQDYLQGFAALRLSGWELMAATAAAAFATASERNDRYEQCGRDVLHGLFQMADTLPLLLVSAVALRFSPNFFTQSVLDQTEIVNQLRSIQHWCPLYHAFLGSFYDECGMSEAQVDEAHLRRHLAFSGSSLGCYQVLEGLQSVQRKIDRPVRGIVPPSLDGPWSVEFREVSFRYSDRHPYVLRRVSFVVNKGEFLGIAGYSGSGKTTLLRLLNRTYAPTEGDIFVNGVHISQYPARMLRRRIANVWQEENNLRFIEDLSIGGNIALGNLWDCSDENICAALSASRALSFVQKRSSGIHAPLNVREFSGGEVERLCIARAFVKAGSAVGLCIFDEPTSAIDTITEGEIFDTLRLREGNNLLRDSTIIIVAHRLATLKHADKIVVLNEGMVAEVGSWETLSRTGPHSCFSRMRQSQQLPHFVK
Protein: candidapepsin (EC 3.4.23.24) (G8BHE2)
Organism: Candida parapsilosis (strain CDC 317 / ATCC MYA-4646) (Yeast) (Monilia parapsilosis)
Subcellular location: Secreted {ECO:0000256|ARBA:ARBA00004613}.
Interaction partners:
Sequence:
MSIPGLLFLLASYLPIIVESAISLDFDVLTHEMEPRFDKRDTLNTAIKLQKNVYLTNLTIGSSKDEVVVSIDTGSSELWVMSQNVQCATVDQLHAENAPNIPNIFNDLDEEYSCKANGTFDYENSTTYKYINDDFSIAFADGSAAIGQYGRDDVSVGNVTIEGLKFGVATASSIDFGILGIKHNERYDNFISLLKKQGYIDTAQYSIYLNDQKGTILFGGVDNNKYQGELATTHMENSGIHIKDVSLSGDKTTSIQSQLQYVIFDTGSTFSTLPSDWIKVIGESINGTYNNDEQAYEVPCESTNEVFFNFKVGNTTLNVSVSDLIINNERTNGKCYLGVMDESLIGGTIFGSDILKHFYVVFNLDDDKLSIAPVSTSDDASDTESSSSENRFSNRSEASTNNIRTMLYAYCMSLIPLSIYVFVLY
Protein: Kinesin-73 (O01349)
Organism: Drosophila melanogaster (Fruit fly)
Subcellular location: Cytoplasm, cytoskeleton {ECO:0000256|ARBA:ARBA00004245}.
Interaction partners:
Sequence:
MASDKIKVAVRVRPFNRREIELDTKCIVEMEKQQTILQNPPPLEKIERKQPKTFAFDHCFYSLNPEDENFASQETVFDCVGRGILDNAFQGYNACIFAYGQTGSGKSYTMMGTQESKGIIPRLCDQLFSAIANKSTPELMYKVEVSYMEIYNEKVHDLLDPKPNKQSLKVREHNVMGPYVDGLSQLAVTSYQDIDNLMTEGNKSRTVAATNMNAESSRSHAVFSVVLTQILTDQATGVSGEKVSRMSLVDLAGSERAVKTGAVGDRLKEGSNINKSLTTLGLVISKLADQSNGKKSGNDKFVPYRDSVLTWLLKDNLGGNSRTVMVATISPSADNYEETLSTLRYADRAKRIVNHAVVNEDPNARIIRELRHEVETLRSMLKHATGSPVGDVQDKLAESENLMKQISQTWEEKLVKTERIQNERQQALEKMGISVQASGIKVEKNKYYLVNLNADPSLNELLVYYLKDRTLIGGRTISGQQPDIQLSGLGIQPEHCVITIEDSGLYMEPVQGARCFVNGSAAVEKTPLQNGDRILWGNHHFFRVNSPKSNNTSMCASEPQTPAQLIDYNFARDEIMQNELSNDPIQTAIARLERQHEEDKQVALEKQRQEYERQFQQLRNILSPSTPYAPYAPYDPLRMGKITPNTPTSQMRVEKWAQERDEMFRRSLGQLKTDIMRANSLVQEANFLAEEMEKKTKFSVTLQIPPANLSPNRRRGAFVSEPAILAKRTNSGSQIWTMEKLENKLIDMREMYQEHKERVLNGLPLIEPFSEDEFDDKDEDNAKPQDPFYESQENHNLIGVANIFLEVLFHDVKLDYHTPIISQQGEVAGRLQVEIERIAGQMPQDRMCESVSESSGDSRDEYDDPVDPTSNQITCRVTIKCASGLPLSLSNFVFCQYTFWGHQEMVVPVINAESTAHDQNMVFKFEHTQDFTVTINEEFLEHCIEGALSIEVWGHRSAGFSKTKGWEVEQQQAKARSLVDRWAELSRKIELWVEIHELNDNGEYSPVEVTNRNEVLTGGIYQLRQGQQRRVNVRVKPVQNSGTLPIICQSIVNVAIGSVTVRSRLQRPLDSYQEEDLTVLREKWSEALGRRRQYLDQQIQMLIKKEEKNEQERERELSLVHQWVSLTEERNAVLVPAPGSGIPGAPASWEPPSGMEPHVPVLFLNLNGDDLSAQNTNDELSVAGINSILSKEHGHKFYTLQILQHLDKDVCCVASWDSSMHDSQALNRVTEANERVYLILRTTVRLSHPAPMDLVLRKRLSINIKKGQTLTDRLKKFRLVRGENAIWQSGVTYEVVSNIPKASEELEDRESLAQLAASGDDCSASDGETYIEKYTRGVSAVESILTLDRLRQNVAVKELETAHGQPLSMRKTVSVPNFSQQLINKLTQIMRFDASMESLLNVGRSESFADLNNSALGNKFTPAGHSPAGAGGVIRSRHSFGGKGSSDDSPGKAFGIASPATSKLLGMRMTTLHEEPLGGHRSLDEEPEDSYSDSEYAAEYEQERQQNKSMATRSRLTASKTMDSFMDVSSHSNQSYLSYTSSANANMKHLTGLATLSMSSSTSSGYGSQAVSCNNLSNEDIASMRSMSIDETPDFDRVNSNSPPNRQARVNPFLKDMPKAKIQEQPEPQAKKLQEAFTHPLEQLESRENAQSDDDECAQLPKNNNNNVDLVNEPKPLSGQMELEEPMSQPESQTEFATDNQNGNRSSDELSHSSEDLLEGDGIVREELPAGKVVRRKKSNTQPPSNGNSINNNNNGTTQVPRINHRASVAKMEGLAAYLDSSIMTSSTEVDEESKDVELVLPEWLVVGESVLIRPYNTSGVIRFVGTTEFQPGAWIGVELDTPTGKNDGSVKGVQYFQCKPKHGMFVRSDKLMLDKRGKAMRAYKAAEKSNSISKEMSTSMTGSMTRSKSRGDSLNLSARK
Protein: PPARG related coactivator 1 (X6R7H2)
Organism: Homo sapiens (Human)
Subcellular location: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
Interaction partners:
Sequence:
MAPPLSLGLPGHGAPQTEPTKVEVKPVPASPHPKHKVSALVQSPQMKALACVSAEGVTVEEPASERLKPETQETRPREKPPLPATKAVPTPRQSTVPKLPAVHPARLRKLSFLPTPRTQGSEDVVQAFISEIGIEASDLSSLLEQFEKSEAKKECPPPAPADSLAVGNSGGVDIPQEKRPLDRLQAPELANVAGLTPPATPPHQLWKPLAAVSLLAKAKSPKSTAQEGTLKPEGVTEAKHPAAVRLQEGVHGPSRVHVGSGDHDYCVRSRTPPKKMPALVIPEVGSRWNVKRHQDITIKPVLSLGPAAPPPPCIAASREPLDHRTSSEQADPSAPCLAPSSLLSPEASPCRNDMNTRTPPEPSAKQRSMRCYRKACRSASPSSQGWQGRRGRNSRSVSSGSNRTSEASSSSSSSSSSSRSRSRSLSPPHKRWRRSSCSSSGRSRRCSSSSSSSSSSSSSSSSSSSSRSRSRSPSPRRRSDRRRRYSSYRSHDHYQRQRVLQKERAIEERRVVFIGKIPGRMTRSELKQRFSVFGEIEECTIHFRVQGDNYGFVTYRYAEEAFAAIESGHKLRQADEQPFDLCFGGRRQFCKRSYSDLDSNREDFDPAPVKSKFDSLDFDTLLKQAQKNLRR
Protein: WD repeat domain 34 (WD repeat-containing protein 34) (Zgc:171284 protein) (A7MD87)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Subcellular location: Cytoplasm {ECO:0000256|ARBA:ARBA00004496}.
Interaction partners:
- Cytoplasmic dynein 2 light intermediate chain 1
- Tctex1 domain-containing 2.
- Dynein cytoplasmic 2 heavy chain 1.
- Dynein light chain roadblock
- Dynein light chain roadblock-type 2.
- Dynein light chain Tctex-type 1
- Cytoplasmic dynein 2 intermediate chain 1 isoform X2
- WD repeat-containing protein 35
- WD repeat domain 19.
- Dynein light chain
Sequence:
MFTDETLDLVGAESTWRKSHQQTQESRSCQTRPVHTTETETQAKDVSENGTQTQDQSGQTLSLDRDLTDFPGLLDFMRRAEDVVIRELVKNSKSHAFDGFEVNWEEQNESVSCMYRLQHVDAQEKSLQVTSVSWNCTGSVIACGFGRVDDGDWSNEKACVCTWNVDRQNLNPKRPDVIIDVATPVMCLCFHPVRPSVVAGGLYSGEVVVWDTSRSQDLILAQTGMSADTHREPVYQINWVPGARRGEFSVLSAGSGGRVLLWTIDGSEAKLLLSSGYALVRQQMPQSGAASKTRGSLTIGVTAVALSPWDLDTFLVGSEGGLVLKCSFSSETAAAVPSDGESVILRAPMQFSFSPRGGPIHSVHFSPFHRNLFVSVGTDGLAHLHSVLQPCPLLALRVSDSYVFGVRWSPTRPLVFAAVTGQGLVQMFDLGRRSLRPVATIDQNAGGQPAYCLEFNPKHTNLLAVGNADGSVNIWQLSAELTEQGAKETAMLEQLANEVAD
Protein: U6 snRNA-associated Sm-like protein LSm1 (Q8VC85)
Organism: Mus musculus (Mouse)
Function: Plays a role in the degradation of histone mRNAs, the only eukaryotic mRNAs that are not polyadenylated (By similarity). Probably also part of an LSm subunits-containing complex involved in the general process of mRNA degradation (By similarity).
Subcellular location: Cytoplasm {ECO:0000250|UniProtKB:O15116}. Cytoplasm, P-body {ECO:0000250|UniProtKB:O15116}.
Interaction partners:
- U6 snRNA-associated Sm-like protein LSm7
- U6 snRNA-associated Sm-like protein LSm6
- U6 snRNA-associated Sm-like protein LSm4
- U6 snRNA-associated Sm-like protein LSm5
- U6 snRNA-associated Sm-like protein LSm2
- Protein PAT1 homolog 1
- U6 snRNA-associated Sm-like protein LSm3
- Probable ATP-dependent RNA helicase DDX6
- 5'-3' exoribonuclease 1
- U6 snRNA-associated Sm-like protein LSm8
Sequence:
MNYMPGTASLIEDIDKKHLVLLRDGRTLIGFLRSIDQFANLVLHQTVERIHVGKKYGDIPRGIFVVRGENVVLLGEIDLEKESDTPLQQVSIEEILEEQRVQQQTRLEAEKLKVQTLKDRGLSIPRADTLDEY