wanglab/gogpt-training-data huggingface dataset:
Protein: GDP/GTP exchange factor Sec2 N-terminal domain-containing protein (Q20759)
Organism: Caenorhabditis elegans
Interaction partners:
- Ras-related protein rab-11.1
- Rab8
- Exocyst complex component 6
- Transmembrane protein 184B
- Ras-related protein Rab-10
- Ras-related protein Rab-25
- Exocyst complex component 5
- Uncharacterized protein F02A9.1
- Exocyst complex component 4
- Exocyst complex component 3
Sequence:
MVDTISVLNPIHLDLSVDPQDNVRISARSTTSSSASTSSDSELMSPRAEELLRMQAELRATRTALAEKDKKMTQIQVTVDAEVQELTEKLFQEAYKMVNTAEARREKAEKLLTESRLEVEVLQAEVRALKELISAPGMGQNHFKQTTSPEHKSTLSKLFNGSSSSSKKQKDAANVSDKKKASSLPSTSTYTLTPSEDREQKEANAVEEIDPILFSEFEFWREAGHPTTSHPFIDRVTVEEVEPCMLFENSELSEEIMKAIRENRVQLEPLNELKPSVRICALTNASRFCPYRVRTGDEEQEWHYVSLIARNRIAAVCDFFTCIRYLSQGLIKPGPRDSYFHVVNLRKNMSLAKLGLGFVPRSNIRHH
Protein: Male-specific sperm protein Mst84Dd (Q01645)
Organism: Drosophila melanogaster (Fruit fly)
Interaction partners:
- AT27166p
- Protein doublesex
- Homeobox protein goosecoid
- Male-specific sperm protein Mst84Dc
- Male-specific sperm protein Mst84Da
- AT13777p
- LP10995p
- Cytosol aminopeptidase
- GEO12122p1
- 10 kDa heat shock protein, mitochondrial
Sequence:
MGCAPGGPCCGPCGPCCGPCCGPCCGPCCGPCCGPCGPCCGPCGPRCGPCGPCGPCCGTMEKRNGLQRCCPF
Protein: Tetranectin (TN) (C-type lectin domain family 3 member B) (Plasminogen kringle 4-binding protein) (P05452)
Organism: Homo sapiens (Human)
Function: Tetranectin binds to plasminogen and to isolated kringle 4. May be involved in the packaging of molecules destined for exocytosis. Plays a role in retinal function.
Subcellular location: Secreted.
Interaction partners:
- Plasminogen
- Tumor necrosis factor
- Alpha-enolase
- Selenoprotein P
Sequence:
MELWGAYLLLCLFSLLTQVTTEPPTQKPKKIVNAKKDVVNTKMFEELKSRLDTLAQEVALLKEQQALQTVCLKGTKVHMKCFLAFTQTKTFHEASEDCISRGGTLGTPQTGSENDALYEYLRQSVGNEAEIWLGLNDMAAEGTWVDMTGARIAYKNWETEITAQPDGGKTENCAVLSGAANGKWFDKRCRDQLPYICQFGIV
Protein: Inner kinetochore subunit mis6 (CENP-I homolog) (Constitutive centromere-associated network protein mis6) (Sim4 complex subunit mis6) (P87227)
Organism: Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Function: Component of the kinetochore, a multiprotein complex that assembles on centromeric DNA and attaches chromosomes to spindle microtubules, mediating chromosome segregation and sister chromatid segregation during meiosis and mitosis. Component of the inner kinetochore constitutive centromere-associated network (CCAN), which serves as a structural platform for outer kinetochore assembly. Required for the localization of cnp1 to the centromere.
Subcellular location: Nucleus {ECO:0000269|PubMed:16823372}. Chromosome, centromere {ECO:0000269|PubMed:16823372}.
Interaction partners:
- Inner kinetochore subunit mis15
- Inner kinetochore subunit mis17
- Inner kinetochore subunit mal2
- Inner kinetochore subunit fta2
- Aurora kinase
- Inner kinetochore subunit fta3
- Tubulin alpha-2 chain
- Outer kinetochore KNL1 complex subunit spc7
- Inner kinetochore subunit fta7
- Inner kinetochore subunit sim4
Sequence:
MESFENKGFLDIEEGIQWIKKNSENLSSSKKTILARLQQFHKLCSEVGLNQHSISSLLDVILSKKTHFDKNHVQLLIKCLYPNELISQTIAIRIISSLDPHGLRCSYAIQAKLLNWLIHVYEFLDGNNLLCRYYGVLFHFLDFLTLRPYISNLLVLLTKHYHVKSFRIHQLLALYQKPGNTADPYLLALILTYKQHFPDVIVGSYTYRKHGSVRLDSEWIAATKAILNRQSEDVPLETWSSEKRKRQSSLIPDLITMKNTSSSYSLEELTSVQQMGLVYEKIVFPSRIAAVLKSKLFLIFLFLKNKNVYYSRLDEWLHITLNYGLALRSGSNNQEEEVLHLLYKYLLFSPKFPKSLLQYVITFFSKPNITEENYNLLTLLVTHIPITTDSSYFNSLLKEFEQFILQKNAEFCSKHLNILWLWLFRMLNLRIASMGNNHTLLEKCLLITNHATFLVSHFSWDVSLAYQLSRLFQLYYKILTKIRKQIEPNIPPKELIYVLFFQPSAFYINSMVGLLLLTKNYQERLMDSRIDAISKFTHSYLKSLSEIILLKEKRAILSFLQLWEPFKSDYSQFLPIATRIANDHPYAQRVFSLTCAPQFFSYINGYQIYLQQTNPATGSIPLKPIQEETFGAFQSNLHLSDSWEDFQKNFIIYLKKKGYLAISDFLLSTLNR
Protein: Sensor histidine kinase TodS (EC 2.7.13.3) (E0X9C7)
Organism: Pseudomonas putida (strain DOT-T1E)
Function: Member of the two-component regulatory system TodS/TodT involved in the regulation of toluene degradation. Phosphorylates TodT via a four-step phosphorelay in response to toluene. Can also be induced by benzene and ethylbenzene.
Subcellular location: Cytoplasm {ECO:0000269|PubMed:22212183}.
Interaction partners:
Sequence:
MSSLDRKKPQNRSKNNYYNICLKEKGSEELTCEEHARIIFDGLYEFVGLLDAHGNVLEVNQVALEGAGITLEEIRGKPFWKARWWQISKKTEATQKRLVETASSGEFVRCDVEILGKSGGREVIAVDFSLLPICNEEGSIVYLLAEGRNITDKKKAEAMLALKNQELEQSVERIRKLDNAKSDFFAKVSHELRTPLSLILGPLEAVMAAEAGRESPYWKQFEVIQRNAMTLLKQVNTLLDLAKMDARQMGLSYRRANLSQLTRTISSNFEGIAQQKSITFDTKLPVQMVAEVDCEKYERIILNLLSNAFKFTPDGGLIRCCLSLSRPNYALVTVSDSGPGIPPALRKEIFERFHQLSQEGQQATRGTGLGLSIVKEFVELHRGTISVSDAPGGGALFQVKLPLNAPEGAYVASNTAPRRDNPQVVDTDEYLLLAPNAENEAEVLPFQSDQPRVLIVEDNPDMRGFIKDCLSSDYQVYVAPDGAKALELMSNMPPDLLITDLMMPVMSGDMLVHQVRKKNELSHIPIMVLSAKSDAELRVKLLSESVQDFLLKPFSAHELRARVSNLVSMKVAGDALRKELSDQGDDIAILTHRLIKSRHRLQQSNIALSASEARWKAVYENSAAGIVLTDPENRILNANPAFQRITGYGEKDLEGLSMEQLTPSDESPQIKQRLANLLQGGGAEYSVERSYLCKNGSTIWANASVSLMPQRVGESPVILQIIDDITEKKQAQENLNQLQQQLVYVSRSATMGEFAAYIAHEINQPLSAIMTNANAGTRWLGNEPSNIPEAKEALARIIRDSDRAAEIIRMVRSFLKRQETVLKPIDLKALVTDTSLILKAPSQNNSVNLDVVADDELPEIWGDGVQIQQLIINLAMNAIEAISQADCETRQLTLSFSGNDTGDALVISVKDTGPGISERQMAQLFNAFYTTKKEGLGMGLAICLTITEVHNGKIWVECPPAGGACFLVSIPARQGSGT
Protein: Non-histone chromosomal protein 6 (P87057)
Organism: Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Function: DNA-binding protein that induces severe bending of DNA. Required for DNA-binding by the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. Also augments the fidelity of transcription by RNA polymerase III independently of any role in the FACT complex (By similarity).
Subcellular location: Nucleus {ECO:0000255|PROSITE-ProRule:PRU00267}. Chromosome {ECO:0000250|UniProtKB:P11632}.
Interaction partners:
- FACT complex subunit pob3
- FACT complex subunit spt16
- Histone H2A.Z
- DNA-directed RNA polymerase, mitochondrial
- Mitochondrial transcription factor 1
- Cytosine-containing mismatch-binding protein 1
Sequence:
MPRAAKSSRKKDPNTPKRNMSAFMFFSIENREKMKTDNPDATFGQLGSLLGKRWKELTSTEREPYEEKARQDKERYERERKEYDTKLANGEKTGKASAPAAAAAAKEE
Protein: Killer cell lectin-like receptor 2 (Lymphocyte antigen 49b) (Ly-49b) (T-cell surface glycoprotein Ly-49B) (Q60660)
Organism: Mus musculus (Mouse)
Function: Receptor on natural killer (NK) cells for class I MHC.
Subcellular location: Membrane; Single-pass type II membrane protein.
Interaction partners:
Sequence:
MSEQEVTYTTLRFHKSSGLQNPVRPEETQRPRDVGHRECSVPWKFIVIVLGILCFLLLLTVAVLVIHIFRDGQEKHEQEKTLNNLRQEYQVMKNDSSLMEEMLRNKSSECKALNDSLHYLNREQNRCLRKTKIVLDCSQNKGKQVEGYWFCCGMKCYYFIMDDKKWNGCKQICQDYNLTLLKTNDEDELKFLKSQLQRNTYWISLTHHKSKEESQQIGDRPSKLDSAARNSVPNRQKCAYLSSFSTEEDDCARTHGCICEKRLNKFPIPGSCAKGRTQSALQRDEDES
Protein: Organelle RRM domain-containing protein 1, chloroplastic (Q8L440)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Involved in C-to-U editing of chloroplastic RNA. Functions as major chloroplastic editing factor. Controls 62 percent of the chloroplastic editing sites. Binds RNA close to ORRM1-dependent editing sites in vitro. Binds the editing recognition trans-factors PCMP-H51/CRR28 and PCMP-H12/OTP82.
Subcellular location: Plastid, chloroplast {ECO:0000255}.
Interaction partners:
- 31 kDa ribonucleoprotein, chloroplastic
- Zinc finger protein VAR3, chloroplastic
- RNA-binding protein CP31B
- Protoporphyrinogen oxidase 1, chloroplastic
- Pentatricopeptide repeat-containing protein At5g13270
- Pentatricopeptide repeat-containing protein At1g08070, chloroplastic
- Pentatricopeptide repeat-containing protein At5g48910
- Pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial
- Pentatricopeptide repeat-containing protein DWY1, chloroplastic
- Multiple organellar RNA editing factor 1, mitochondrial
Sequence:
MEALIASTSFFVPISNSSSSHIINNRFFPSFYSPNLNFGTFRKTSLSSSHLVFSSSAISAPPSSTVLTRNSYWMVLLDKPPHWVSSKSAMVDYYVEILAKVLGNEKDAQVSIYDASFDTHFGFCCHIDEDASRQLASLPGVVSIRPEQDYSSEKKNYGIGSHKGVSLFDHGTVKHWMVRIDKPGVGIVTKAQMVDHCVQLLSKVLWNEKDAQMCLYHVSWQSDFGFCCDLDERSAVELAGVPGVLAVVPDNSFESLNKDYEGDSTQDSRDQDDSESPPVKTKKLFITGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFLEYTTEEAAGTALKEMNGKIINGWMIVVDVAKTKPFRQNRSQPSFGL
Protein: Small ribosomal subunit protein mS26 (28S ribosomal protein S26, mitochondrial) (H6UQ75)
Organism: Gallus gallus (Chicken)
Subcellular location: Mitochondrion {ECO:0000256|ARBA:ARBA00004173}. Secreted {ECO:0000256|ARBA:ARBA00004613}.
Interaction partners:
Sequence:
MAPGGCLLLALLLLAGTAQGQHWSHGWYPGGKRDLSAPQAIPAWSPWLVPSRGRKSRYDPPAKAKASRLKVPPPVDPAELYVVTERYRQHRLVLSALRSIFRSEVVQRKSEAQRDAEDSAALSEEHRLLMAWNDAENARQRARR
Protein: Tubulin beta chain (A0A075B736)
Organism: Homo sapiens (Human)
Subcellular location: Cytoplasm, cytoskeleton {ECO:0000256|ARBA:ARBA00004245}.
Interaction partners:
Sequence:
MREIVLTQIGQCGNQIGAKFWEVISDEHAIDSAGTYHGDSHLQLERINVYYNEASGQCGAGNNWAKGHYTEGAELMESVMDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLLSKIREEYPDRIINTFSILPSPKVSDTVVEPYNATLSVHQLIENADETFCIDNEALYDICSKTLKLPTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVAELTQQMFDAKNMMAACDPRHGRYLTAAAIFRGRMPMREVDEQMFNIQDKNSSYFADWLPNNVKTAVCDIPPRGLKMSATFIGNNTAIQELFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEEDEEYAEEEVA
Protein: NAP1-related protein 2 (Nucleosome/chromatin assembly factor group A5) (Protein SET homolog 2) (Q8LC68)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Acts as histone H2A/H2B chaperone in nucleosome assembly, playing a critical role for the correct expression of genes involved in root proliferation and patterning. Required with NRP1 for the maintenance of cell proliferation and differentiation in postembryonic root growth. Involved in both intramolecular and intermolecular somatic homologous recombination.
Subcellular location: Cytoplasm {ECO:0000269|PubMed:17122067}. Nucleus {ECO:0000269|PubMed:17122067}.
Interaction partners:
- Histone H4
- Acidic leucine-rich nuclear phosphoprotein 32-related protein
- Nodulin-related protein 1
- Probable histone chaperone ASF1A
- Histone chaperone ASF1B
Sequence:
MVTDKSKKAKTEEENVEQIDAELVLSIEKLQEIQDDLEKINEKASDEVLEVEQKYNVIRKPVYDKRNEIIKTIPDFWLTAFLSHPALGELLTEEDQKIFKYLSSLDVEDAKDVKSGYSITFSFNPNPFFEDGKLTKTFTFLEEGTTKITATPIKWKEGKGLANGVNHEKNGNKRALPEESFFTWFSDAQHKEDVEDEMQDEVADIIKEDLWPNPLTYFNNDADEEDFDGDDDGDEEEKEGDSDEDDDEEDEVGEE
Protein: Purine nucleoside phosphorylase (PNP) (EC 2.4.2.1) (Inosine phosphorylase) (Inosine-guanosine phosphorylase) (Q05788)
Organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Function: The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta-(deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. Cleaves guanosine and inosine (By similarity).
Interaction partners:
- Uridine nucleosidase
- Nicotinamide/nicotinic acid mononucleotide adenylyltransferase 1
- Suppressor of disruption of TFIIS
- Nicotinamide/nicotinic acid mononucleotide adenylyltransferase 2
- IMP-specific 5'-nucleotidase 1
- Probable guanine deaminase
- Hypoxanthine-guanine phosphoribosyltransferase
- Adenine deaminase
- Adenine phosphoribosyltransferase 1
- NAD-dependent histone deacetylase SIR2
Sequence:
MSDILNVSQQREAITKAAAYISAILEPHFKNTTNFEPPRTLIICGSGLGGISTKLSRDNPPPVTVPYQDIPGFKKSTVPGHSGTLMFGSMNGSPVVLMNGRLHGYEGNTLFETTFPIRVLNHMGHVRNLIVTNAAGGINAKYQACDLMCIYDHLNIPGLAGQHPLRGPNLDEDGPRFLALSDAYDLELRKLLFKKWKELKIQRPLHEGTYTFVSGPTFETRAESKMIRMLGGDAVGMSTVPEVIVARHCGWRVLALSLITNTCVVDSPASALDESPVPLEKGKATHAEVLENGKIASNDVQNLIAAVMGEL
Protein: Uncharacterized protein C31A2.10 (Q09721)
Organism: Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Interaction partners:
Sequence:
MDQVLSKVTTTAATYATAYAVRTGLQLAGSLVAKRFSKYIQTSAPKSSQFNLELVKSRLEQKIQAITPAVDLIQLVAARGNSSLQNLVPLIIRLRDHIDDFLEFIDYEASGSEKKSPEKADEASEKIFRRCEVLLREIEETIPLINLSLTTAGITLNTALSNTISPSRLLQAQCFLELSDKRFEESHTEIQIGPKFTVVLYTSFSQPSKSDGPLDVRWQETFAKSDLYIKRVVSASQKFSYVICIDEDLNDGRYHEETVGKPTSAPVFGKKLEISLQRMSLLCYTVSGRLLNISQAKSPVLALQLTSIKDVSALDKAHQDNSEDLNNPFIKNNDKTKFHQNIDWIALEKYFEVNALDISDSESEDLSDILSDSEFSIGNRNKNIGNNEYSAQISSDPAEEEIANAMHSLKLEPETSIYLTNPGSLSLLEYLLRLCSLQELHQISCLEMTDSQLAAMLNSN
Protein: Ras-related protein RABA4a (AtRABA4a) (Q9FJN8)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Intracellular vesicle trafficking and protein transport.
Subcellular location: Cell membrane {ECO:0000305}; Lipid-anchor {ECO:0000305}; Cytoplasmic side {ECO:0000305}.
Interaction partners:
- Geranylgeranyl transferase type-2 subunit beta 1
- Kinesin-like protein KIN-14E
- Geranylgeranyl transferase type-2 subunit beta 2
Sequence:
MTSGGGYGDPSQKIDYVFKVVLIGDSAVGKSQILARYARDEFSLDSKATIGVEFQTRTLVIDHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITRRQTFDHIPRWLEELRAHADKNIVIILIGNKSDLVDQRAIPTEDAKEFAEKEGLFFLETSAFNATNVESAFSTVLTEIFNIVNKKSLAASEDQENGNPGSLAGKKIDIVPGPGQVIPNKSNMCCNS
Protein: DNA-3-methyladenine glycosylase 2 (EC 3.2.2.21) (3-methyladenine-DNA glycosylase II, inducible) (TAG II) (DNA-3-methyladenine glycosidase II) (DNA-3-methyladenine glycosylase II) (P04395)
Organism: Escherichia coli (strain K12)
Function: Hydrolysis of the deoxyribose N-glycosidic bond to excise 3-methyladenine, 3-methylguanine, 7-methylguanine, O2-methylthymine, and O2-methylcytosine from the damaged DNA polymer formed by alkylation lesions.
Interaction partners:
- Bifunctional transcriptional activator/DNA repair enzyme Ada
- Exodeoxyribonuclease III
- Alpha-ketoglutarate-dependent dioxygenase AlkB
- Methylated-DNA--protein-cysteine methyltransferase
- Putative acyl-CoA dehydrogenase AidB
- DNA-3-methyladenine glycosylase 1
- Endonuclease III lyase)
- Formamidopyrimidine-DNA glycosylase
- Endonuclease 4
- Endonuclease V
Sequence:
MYTLNWQPPYDWSWMLGFLAARAVSSVETVADSYYARSLAVGEYRGVVTAIPDIARHTLHINLSAGLEPVAAECLAKMSRLFDLQCNPQIVNGALGRLGAARPGLRLPGCVDAFEQGVRAILGQLVSVAMAAKLTARVAQLYGERLDDFPEYICFPTPQRLAAADPQALKALGMPLKRAEALIHLANAALEGTLPMTIPGDVEQAMKTLQTFPGIGRWTANYFALRGWQAKDVFLPDDYLIKQRFPGMTPAQIRRYAERWKPWRSYALLHIWYTEGWQPDEA
Protein: Krueppel-like factor 5 (Basic transcription element-binding protein 2) (BTE-binding protein 2) (Colon krueppel-like factor) (GC-box-binding protein 2) (Intestinal-enriched krueppel-like factor) (Transcription factor BTEB2) (Q13887)
Organism: Homo sapiens (Human)
Function: Transcription factor that binds to GC box promoter elements. Activates the transcription of these genes.
Subcellular location: Nucleus {ECO:0000269|PubMed:15735697}.
Interaction partners:
- CCAAT/enhancer-binding protein beta
- CCAAT/enhancer-binding protein delta
- CCAAT/enhancer-binding protein alpha
- F-box/WD repeat-containing protein 7
- Retinoic acid receptor alpha
- Histone acetyltransferase p300
- NEDD4-like E3 ubiquitin-protein ligase WWP1
- Peroxisome proliferator-activated receptor gamma
- Estrogen receptor beta
- Transcription factor Jun
Sequence:
MATRVLSMSARLGPVPQPPAPQDEPVFAQLKPVLGAANPARDAALFPGEELKHAHHRPQAQPAPAQAPQPAQPPATGPRLPPEDLVQTRCEMEKYLTPQLPPVPIIPEHKKYRRDSASVVDQFFTDTEGLPYSINMNVFLPDITHLRTGLYKSQRPCVTHIKTEPVAIFSHQSETTAPPPAPTQALPEFTSIFSSHQTAAPEVNNIFIKQELPTPDLHLSVPTQQGHLYQLLNTPDLDMPSSTNQTAAMDTLNVSMSAAMAGLNTHTSAVPQTAVKQFQGMPPCTYTMPSQFLPQQATYFPPSPPSSEPGSPDRQAEMLQNLTPPPSYAATIASKLAIHNPNLPTTLPVNSQNIQPVRYNRRSNPDLEKRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQN
Protein: Small ribosomal subunit protein eS4 (40S ribosomal protein S4) (P51405)
Organism: Dictyostelium discoideum (Social amoeba)
Subcellular location: Cytoplasm {ECO:0000250}.
Interaction partners:
- Large ribosomal subunit protein eL18
- Large ribosomal subunit protein eL15
- Small ribosomal subunit protein eS26
- Small ribosomal subunit protein eS21
- Large ribosomal subunit protein eL13
- Large ribosomal subunit protein eL19
- Small ribosomal subunit protein eS25
- Small ribosomal subunit protein uS7
- Large ribosomal subunit protein eL14
- Small ribosomal subunit protein eS7
Sequence:
MARGPKKHLKRLAAPNHWMLDKLSGKWAPRPSSGPHKLRECLPLILVLRNRLKYALTKKEVTLILMQRLVKVDGKVRTDPNYPAGFMDVISIEKTKENFRLLFDPKGRFTLQRITPEEAKFKLARVTRVETGNQGIPYVHTDDGRTIRYPDPAISIHDTIKIDIESGKITAFIPFEVNNLCMIVGGHNLGRVGAVTHREKHPGSFDIVHVTDTAGHQFATRLSNVFIIGKASQTFVSLPAGKGVRRSRVDERNAALKRRGEKIETVA
Protein: Universal stress protein Rv1996 (USP Rv1996) (P9WLP1)
Organism: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Interaction partners:
- Dormancy associated translation inhibitor
- Uncharacterized protein Rv1738
- Putative NAD
- Uncharacterized protein Rv3127
- Alpha-crystallin
- Putative NAD
- Ferredoxin
- Universal stress protein Rv3134c
- Uncharacterized protein Rv0080
- Probable diacyglycerol O-acyltransferase tgs1
Sequence:
MSAQQTNLGIVVGVDGSPCSHTAVEWAARDAQMRNVALRVVQVVPPVITAPEGWAFEYSRFQEAQKREIVEHSYLVAQAHQIVEQAHKVALEASSSGRAAQITGEVLHGQIVPTLANISRQVAMVVLGYRGQGAVAGALLGSVSSSLVRHAHGPVAVIPEEPRPARPPHAPVVVGIDGSPTSGLAAEIAFDEASRRGVDLVALHAWSDMGPLDFPRLNWAPIEWRNLEDEQEKMLARRLSGWQDRYPDVVVHKVVVCDRPAPRLLELAQTAQLVVVGSHGRGGFPGMHLGSVSRAVVNSGQAPVIVARIPQDPAVPA
Protein: Uncharacterized protein (Q4GYJ7)
Organism: Trypanosoma brucei brucei (strain 927/4 GUTat10.1)
Interaction partners:
Sequence:
MRCTHVRFFGSSGVGPFGSWFVRIFGSDVVRKGSMSLGKLSLSNGGTNLRKFGFDTSGDAPDRSFKRDSGAGPFERSGGGGGPFGGSLGGLFDRALEWCSESHARDIARREGIDVRDIRFEKTPEGGVKVMVDAPNATIKQIEQLGEKVMDECPVARFRKTQVTSPQQKVEWIRIPDRYDR
Protein: Cruciform cutting endonuclease 1, mitochondrial (EC 3.1.21.10) (Q03702)
Organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Function: Capable of resolving Holliday junctions. Specific for 4-way junctions. Seems to be important for the maintenance of mitochondrial DNA. Cleaves fixed junctions at the point of strand exchange. Cleaves after 5'-CT-3' sequence.
Subcellular location: Mitochondrion.
Interaction partners:
- Large ribosomal subunit protein mL67
- ARS-binding factor 2
- Putative uncharacterized protein Q0092
- DNA mismatch repair protein MSH1, mitochondrial
- DNA damage-inducible protein DIN7
- L-2-aminoadipate reductase
Sequence:
MSTAQKAKILQLIDSCCQNAKSTQLKSLSFVIGAVNGTTKEAKRTYIQEQCEFLEKLRQQKIREGRINILSMDAGVSNFAFSKMQLLNNDPLPKVLDWQKINLEEKFFQNLKKLSLNPAETSELVFNLTEYLFESMPIPDMFTIERQRTRTMSSRHILDPILKVNILEQILFSNLENKMKYTNKIPNTSKLRYMVCSSDPHRMTSYWCIPREETPTSSKKLKSNKHSKDSRIKLVKKILSTSILEGNSTSSTKLVEFIGVWNNRIRNALTKKKSFKLCDILEIQDNSGVRKDDDLADSFLHCLSWMEWLKNYESITELLNSKTLVKTQFGQVFEFCENKVQKLKFLQNTYNND
Protein: Cysteine-serine-rich nuclear protein 1a (Cysteine/serine-rich nuclear protein 1) (B0S776)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Subcellular location: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
Interaction partners:
- Muscle segment homeobox 1a.
- FERM and PDZ domain-containing 3
Sequence:
MVVSSTHEIQIHNCWITMTTSQRGGLKRKYGFPDEDAVYSSSSPSSHSEWDSDEDSPQSDSMDPGPIGSFSSNHHMPISSILKKTKGSQSKGSVRFGSVTVFLFQRCQGYSSVPSHGGCTLGMVRWHTARQQFTLPEHAEEQQRLRLVRVRERHQEEKLEALRQKLISSGTLTVTEAARLTVNDVPDEDGDLSSAQLKDMGSLRPYSSKRRRAMLRAAGVLRIDREEKRQLQDLRRSREDCGCHCKGFCEPETCSCSQAGIKCQMDRSNFPCGCSKECCGNPAGRIEFNSSRVRSHYIHTHMKLELEKRLDDTQQQSTERNKSIPNPVESSSPPFRQAENSWSSDTSCSSSLSLDSETDASPSSEDMEDTRLTHILSFSDSDADRCPYIKDYDLSKEAARFASTIDNEQLKTKPQLEYLDENANQVTVKCVNDPFFDIPNTPSASPDHTVNGYMDLSLSSDSDLMFFDAFHEFNHFKTYGHMDYISHLQFPRCPSPAQTEDSGISLLESLVGSS
Protein: Transforming acidic coiled-coil containing protein 3 (C9JA91)
Organism: Homo sapiens (Human)
Interaction partners:
Sequence:
MSLQVLNDKNVSNEKNTENCDFLFSPPEVTGRSSVLRVSQKENVPPKNLAKAMKVTFQTPLRDPQTHRILSPSMASKLEAPFTQDDTLGLENSHPVWTQKENQQLIKEVDAKTTHGILQKPVEADTDLLGDASPAFGSGSSSESGPGALADLDCSSSSQSPGSSENQMVSPGKVSGSPEQAVEENLSSYSLDRRVTPASETLEDPCRTESQHKAETPHGAEEECKAETPH
Protein: Wnt inhibitor of Dorsal protein (Protein Wnt-8) (dWnt-8) (Q9VFX1)
Organism: Drosophila melanogaster (Fruit fly)
Function: Binds as a ligand to a family of frizzled seven-transmembrane receptors and acts through a cascade of genes on the nucleus.
Subcellular location: Secreted, extracellular space, extracellular matrix.
Interaction partners:
- Low-density lipoprotein receptor-related protein
- Frizzled
- Frizzled-3
- Frizzled-4
- Protein-serine O-palmitoleoyltransferase porcupine
- Frizzled-2
- Protein shifted
- Palmitoleoyl-protein carboxylesterase NOTUM
- Protein wntless
- Axin
Sequence:
MIFAITFFMGITSTLAAVLEPMSYYQYTQFQAPLSWEDITGKGLKQALDSCQQSFQWQRWNCPSQDFVQKNSKPEENSPNREDVYVAAISMAAIVHTLTKDCANGVIAGCGCTENALNVPCAHEPTKALEQYEKHFGSGSGAIGHNRRVVGALLQRSLEQECRCKQPGAVQGECQEEECVAVLKPFEAIAQDLLQMYDDAIQLEGASSNLKIMWQNIPLDSLVFMQDSPNYCERDATGLWKGTRGRQCSKDGSGSLEERLSCQQLCRVCGYRVRSQHVRTERRCNCKLVWGFRLQCDVCVQLERQYSCY
Protein: Tripartite motif containing 16 (cDNA FLJ31464 fis, clone NT2NE2001337, highly similar to Tripartite motif-containing protein 16) (B3KP96)
Organism: Homo sapiens (Human)
Interaction partners:
Sequence:
MIMEDWTCKLQNRVLPSEDPALSQKGYLKKENMAALCRTAESQAELQCTQLDLERKLKLNENAISRLQANQKSVLVSVSEVKAVAEMQFGELLAAVRKAQANVMLFLEEKEQAALSQANGIKAHLEYRSAEMEKSKQELERMAAISNTVQFLEEYCKFKNTEDITFPSVYVGLKDKLSGIRKVITESTVHLIQLLENYKKKLQEFSKEEEYDIRTQVSAVVQRKYWTSKPEPSTREQFLQYAYDITFDPDTAHKYLRLQEENRKVTNTTPWEHPYPDLPSRFLHWRQVLSQQSLYLHRYYFEVEIFGAGTYVGLTCKGIDRKGEERNSCISGNNFSWSLQWNGKEFTAWYSDMETPLKAGPFRRLGVYIDFPGGILSFYGVEYDTMTLVHKFACKFSEPVYAAFWLSKKENAIRIVDLGEEPEKPAPSLVGTAP
Protein: Zinc finger protein 512B (Q96KM6)
Organism: Homo sapiens (Human)
Function: May be involved in transcriptional regulation.
Subcellular location: Nucleus {ECO:0000305}.
Interaction partners:
- Metastasis-associated protein MTA1
- Histone-binding protein RBBP7
- Chromodomain-helicase-DNA-binding protein 4
- Histone-binding protein RBBP4
- Chromodomain-helicase-DNA-binding protein 3
Sequence:
MTDPFCVGGRRLPGSSKSGPGKDGSRKEVRLPMLHDPPKMGMPVVRGGQTVPGQAPLCFDPGSPASDKTEGKKKGRPKAENQALRDIPLSLMNDWKDEFKAHSRVKCPNSGCWLEFPSIYGLKYHYQRCQGGAISDRLAFPCPFCEAAFTSKTQLEKHRIWNHMDRPLPASKPGPISRPVTISRPVGVSKPIGVSKPVTIGKPVGVSKPIGISKPVSVGRPMPVTKAIPVTRPVPVTKPVTVSRPMPVTKAMPVTKPITVTKSVPVTKPVPVTKPITVTKLVTVTKPVPVTKPVTVSRPIVVSKPVTVSRPIAISRHTPPCKMVLLTRSENKAPRATGRNSGKKRAADSLDTCPIPPKQARPENGEYGPSSMGQSSAFQLSADTSSGSLSPGSRPSGGMEALKAAGPASPPEEDPERTKHRRKQKTPKKFTGEQPSISGTFGLKGLVKAEDKARVHRSKKQEGPGPEDARKKVPAAPITVSKEAPAPVAHPAPGGPEEQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAKPSDAEASEGGEQEERERLRKVLKQMGRLRCPQEGCGAAFSSLMGYQYHQRRCGKPPCEVDSPSFPCTHCGKTYRSKAGHDYHVRSEHTAPPPEEPTDKSPEAEDPLGVERTPSGRVRRTSAQVAVFHLQEIAEDELARDWTKRRMKDDLVPETARLNYTRPGLPTLNPQLLEAWKNEVKEKGHVNCPNDCCEAIYSSVSGLKAHLASCSKGAHLAGKYRCLLCPKEFSSESGVKYHILKTHAENWFRTSADPPPKHRSQDSLVPKKEKKKNLAGGKKRGRKPKERTPEEPVAKLPPRRDDWPPGCRDKGARGSTGRKVGVSKAPEK
Protein: Transcription factor E2FB (E2F transcription factor-1) (AtE2F1) (Q9FV71)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Transcription activator that binds DNA cooperatively with DP proteins through the E2 recognition site, 5'-TTTC[CG]CGC-3' found in the promoter region of a number of genes whose products are involved in cell cycle regulation or in DNA replication. The binding of retinoblastoma-related proteins represses transactivation. Involved in the control of cell-cycle progression from G1 to S phase and from G2 to M phase. Stimulates cell proliferation and delays differentiation. Represses cell enlargement and endoreduplication in auxin-free conditions.
Subcellular location: Cytoplasm. Nucleus. Note=Interaction with DPA induces an exclusive nuclear localization, but an interaction with DPB has no effect.
Interaction partners:
- Transcription factor-like protein DPB
- Transcription factor-like protein DPA
- Retinoblastoma-related protein 1
- Transcription factor MYB3R-3
- Transcription factor MYB3R-4
- Transcription factor E2FC
- Histone-binding protein MSI1
- At2g40630/T2P4.2
- Protein ALWAYS EARLY 3
- Protein ALWAYS EARLY 1
Sequence:
MSEEVPQQFPSSKRQLHPSLSSMKPPLVAPGEYHRFDAAETRGGGAVADQVVSDAIVIKSTLKRKTDLVNQIVEVNELNTGVLQTPVSGKGGKAKKTSRSAKSNKSGTLASGSNAGSPGNNFAQAGTCRYDSSLGLLTKKFINLIKQAEDGILDLNKAADTLEVQKRRIYDITNVLEGIGLIEKTLKNRIQWKGLDVSKPGETIESIANLQDEVQNLAAEEARLDDQIRESQERLTSLSEDENNKRLLFVTENDIKNLPCFQNKTLIAVKAPHGTTLEVPDPDEAGGYQRRYRIILRSTMGPIDVYLVSQFEESFEDIPQADEPSNVPDEPSNVPDVPSNLPSTSGLPENHDVSMPMKEESTERNMETQEVDDTQRVYSDIESHDFVDGIMKIVPPDLDMGVDYWFRSEVGEVSITDMWPDESGPDWNQMITFDQDHAGPSDNKILEQPQTPSSPTPEESTATRSPTGS