wanglab/gogpt-training-data huggingface dataset:
Protein: Probable intramembrane protease YKL100C (EC 3.4.23.-) (P34248)
Organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Function: May act as intramembrane protease.
Subcellular location: Membrane {ECO:0000250}; Multi-pass membrane protein {ECO:0000250}. Endoplasmic reticulum membrane {ECO:0000250}; Multi-pass membrane protein {ECO:0000250}.
Interaction partners:
- DER1-like family member protein 1
Sequence:
MDKYLNSFVDHLSEWSSRAFRNNSSSANQSASNKELEQVFEQINAIVENHNNKLTTAFDKISYRVAHKITHLVESHSLVFNYATLVLIASALVVIGSFTSISSIPFTALPPTREHSLFDPTDFDVDHDCHVIYRENDEDKKKKKKSKRFFDMMDEKHAIILPLTSGCTLLALYFVIKKLHLNWLKYVVKILNFNITLLNIPAGTFVYSYFLNSLFRNLSHLASWNPLVVLPRYRVTIADDNEDLNKIGGFVTNLNYKDGLTNSVVHKKTLDEIEKDHWMKHFYRRELVEPKDIKSKRQISNMYLNSALIVSFVLSIVSTVYFYLSPNDWLISNAVSMNMAIWSIAQLKLKNLKSGALILIALFFYDICFVFGTDVMVTVATNLDIPVKLSLPVKFNTAQNNFNFSILGLGDIALPGMFIAMCYKYDIWKWHLDHDDTEFHFLNWSYVGKYFITAMVSYVASLVSAMVSLSIFNTAQPALLYIVPSLLISTILVACWNKDFKQFWNFQYDTIEVDKSLKKAIEKKENSITYSTFILSEYYNDADKYALLGDDVNENFDDDEEFVQEEDLSDSSEEELSEEDLLDDESS
Protein: Magnesium-chelatase 60 kDa subunit (Mg-chelatase subunit D) (EC 6.6.1.1) (Mg-protoporphyrin IX chelatase) (P26175)
Organism: Rhodobacter capsulatus (strain ATCC BAA-309 / NBRC 16581 / SB1003)
Function: Involved in bacteriochlorophyll biosynthesis; introduces a magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX.
Interaction partners:
- Magnesium-chelatase subunit H
- Magnesium-chelatase 38 kDa subunit
- Magnesium protoporphyrin IX methyltransferase
- Magnesium-chelatase, BchO
- Spheroidene monooxygenase
- Ferrochelatase
- Bacteriochlorophyll synthase 23 kDa chain
- Geranylgeranyl diphosphate reductase
- Phytoene synthase
- Protoporphyrinogen IX oxidase
Sequence:
MDHERLKSALAVLTVDPAAVGGLWLRSRAGPIRLAFTDTLAKLPFPMALRRLPPNVDDGALYGGLDVAETLHSGKPVLKGGLLDRPSVFILPMAERCTAKLGARLAQALDLRQHALIALDEAAEPDEALPHAVADRLGLFVDLSEVRSIDGPGLLPETAQIERARELLPQVQMPAERVSEIVEGCRQLGISSLRAPMLALTAARILTALSGRTRVEAEDVLHAAELTLAHRALPLQEAPPPPPPPPEPPEPNEGENQQDEQDQIDPLDGIPPEIVVEAVRAMLPDNILQTLNMGSRLRAASGGQGAGQEQIGNRRGRPLPSRKGKLEDDAKIDLVATLRSAAPWQGLRRRQAPAGTERVLLVESSDIHIKRRKEMSDRVLIFAVDASGSAAVARLSEAKGAVELLLGRAYAARDHVSLITFRGTAAQVLLQPSRSLTQTKRQLQGLPGGGGTPLASGMEMAMVTAKQARSRGMTPTIALLTDGRGNIALDGTANRELAGEQATKVARAIRASGMPAVIIDTAMRPNPALVDLARTMDAHYIALPRATAHKMADVLGAALEA
Protein: Histone-lysine N-methyltransferase set-17 (EC 2.1.1.-) (EC 2.1.1.364) (SET domain-containing protein 17) (A0A163UT06)
Organism: Caenorhabditis elegans
Function: Histone methyltransferase that specifically mono- and di-methylates 'Lys-4' of histone H3 in vitro. Does not tri-methylate 'Lys-4' of histone H3 in vitro. Promotes spermatid development and fertility by positively regulating the transcription of spermatocyte-specific genes in primary spermatocytes. Together with spr-5, required for transgenerational fertility.
Subcellular location: Nucleus {ECO:0000269|PubMed:29702639}. Note=In males and hermaphrodites, localizes to foci in the nucleus of spermatocytes, which express the mono- and di-methyl states of 'Lys-4' of histone H3 (PubMed:29702639). These foci are stable nuclear structures with slow diffusion and liquid-like properties (PubMed:29702639). In turn, these foci co-localize with the transcription start sites for major sperm proteins (PubMed:29702639). {ECO:0000269|PubMed:29702639}.
Interaction partners:
- SET domain-containing protein 14
- protein-histidine N-methyltransferase
- MYND-type domain-containing protein
- Probable histone-lysine N-methyltransferase set-23
- SET domain-containing protein
- SPK domain-containing protein
- PHD-type domain-containing protein
- Lysine-specific histone demethylase 1
Sequence:
MNIKHNYISYFQMNGIQIPGISNPEAIIPITGEKKSYKLVLDFNDGAISIIEARYLDSKLHREIQDLSDNDVTILGTEISDGAYDENLDIHCDKCNKFYRPYCRLHPLFKIPDRVLKRDESSNLSFSQQTLPILFRIEESKLPNAGLGVIAEVFIPVGMVFGPYKGRRCQKKTDFYKDGYAWLIKSGDKRFYIDGSDAERSNWLRYINSPRFEDEQNMLAFQTNGKIFYRVIKPIRINQELLVWYGSSYGNEFVESENGNKYKKPAKNPFICVGAQR
Protein: Protein phosphatase 1 regulatory subunit 3F (R3F) (Q6ZSY5)
Organism: Homo sapiens (Human)
Function: Glycogen-targeting subunit for protein phosphatase 1 (PP1).
Subcellular location: Membrane {ECO:0000250}; Single-pass membrane protein {ECO:0000250}.
Interaction partners:
- Serine/threonine-protein phosphatase PP1-gamma catalytic subunit
- Protein phosphatase 1 regulatory subunit 3E
- Protein phosphatase 1 regulatory subunit 3A
- Serine/threonine-protein phosphatase PP1-beta catalytic subunit
- Serine/threonine-protein phosphatase PP1-alpha catalytic subunit
- Protein phosphatase 1 regulatory subunit 3B
- Glycogen [starch] synthase, liver
- Glycogen [starch] synthase, muscle
- Protein phosphatase 1 regulatory subunit 3D
- Protein phosphatase 1 regulatory subunit 3C
Sequence:
MARTAPVEPPLRHSAPPSPAAGEPRTSVEAAVAPRRVLFADEALGLPLAQLRRYRPWGGPGAGKMAAAAGQDGGGGGGADEDDDGEDGDEGEEEEEACPEPSPLCPVPAGGGFYLVPTFSLPPAPGRLERLGRVMVELEALLPPPGAVPGGAGVWVPGGRPPVLRGLVRVLNRSFEKAVHVRASHDGWASFCDHPARYVPRSPPWAGAGGTGAGDPILDPGLGLGPGQASASSPDDGGRTDRFAFQLPFAEGAGDGARLDFVVRYETPEGTFWANNHGRNYTVLLRIAPAPTPTDAEGLPQQQQLPQLEPQPECQGPVEAEARQLKSCMKPVRRRPAEEELKTKNMDDNTFAMAEHPDVQESVGPLVAPTPLRPWPQMTLQVSDVPMTGNPAEEGDVPRSSPPVAFTEVLQAPAIRIPPSSPLCGLGGSPRDQASGPDASEGATGPFLEPSQQQAEATWGVSSENGGGLEAVSGSEELLGEDTIDQELEQLYLSHLSRLRAAVAAGGAGGGGEGSTDGGMSPSHPLGILTDRDLILKWPGPERALNSALAEEITLHYARLGRGVELIKDTEDPDDEGEGEEGLSVTPSSPEGDSPKESPPEILSGARSVVATMGDVWLPWAEGSGCDGPVVLGTEGQFIGDPEKGMGKDTSSLHMNRVIAGVTESLGEAGTEAQIEVTSEWAGSLDPISGKEPASPVLLQGQNPTLLSPLGAEVCLSSVARPHVSSQDEKDAGPSLEPPKKSPTLAVPAECVCALPPQLRGPLTQTLGVLAGLVVVPVALNSGVSLLVLALCLSLAWFS
Protein: ORF 44 (ORF44) (Tegument protein) (Virion protein) (Q2PJ21)
Organism: Human herpesvirus 3 (HHV-3) (Varicella-zoster virus)
Interaction partners:
Sequence:
MELQRIFPLYTATGAARKLTPEAVQRLCDALTLDMGLWKSILTDPRVKIMRSTAFITLRIAPFIPLQTDTTNIAVVVATIYITRPRQMNLPPKTFHVIVNFNYEVSYAMTATLRIYPVENIDHVFGATFKNPIAYPLPTSIPDPRADPTPADLTPTPNLSDYLQPPRLPKNPYACKVISPGVWWSDERRRLYVLAMEPNLIGLCPAGWHARILGSVLNRLLSHADGCDECNHRVHVGALYALPHVTNHAEGCVCWAPCMWRKAGQRELKVEVDIGATQVLFVDVTTCIRITSTKNPRITANLGDVIAGTNASGLSVPVNSSGWQLYMFGETLSRAIINGCGLLQRICFPETQRLSGEPEPTTT
Protein: Dimethylallyl, adenosine tRNA methylthiotransferase (Q8VY70)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Interaction partners:
Sequence:
MATLSFGIAAAATTVRTIPRFNSRRSKITCEWDPKGVLGPAQTGHIARLEFKRRLERDSEAREAFQKQLREEKERRQALRQSRVVPDTAAELIEYFLDTEAQEIEYEIARLRGRLNDEFFAQIRLEIGQIRFAVTKTADIEDRLIELETLQKALEEGIEAYDKMQNELMTATNSLTKLLTSTDIKTTLLDMVEKNQINRSLLALLDENIANAYKGNQKEAGDYMEKIRSSVLKYLTV
Protein: Succinate dehydrogenase assembly factor 2, mitochondrial (SDH assembly factor 2) (SDHAF2) (Q8C6I2)
Organism: Mus musculus (Mouse)
Function: Plays an essential role in the assembly of succinate dehydrogenase (SDH), an enzyme complex (also referred to as respiratory complex II) that is a component of both the tricarboxylic acid (TCA) cycle and the mitochondrial electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SDHA of the SDH catalytic dimer.
Subcellular location: Mitochondrion matrix {ECO:0000255|HAMAP-Rule:MF_03057}.
Interaction partners:
- Succinate dehydrogenase flavoprotein subunit, mitochondrial
- Succinate dehydrogenase cytochrome b560 subunit, mitochondrial
- Succinate dehydrogenase iron-sulfur subunit, mitochondrial
- Succinate dehydrogenase cytochrome b small subunit, mitochondrial
- Succinate dehydrogenase assembly factor 1, mitochondrial
- Succinate dehydrogenase assembly factor 4, mitochondrial
- Succinate dehydrogenase assembly factor 3, mitochondrial
- Small ribosomal subunit protein mS23
- Transmembrane protein 127
Sequence:
MAVVTLIPTLARALSKHSLLSPLPSVTSFRRFYRGDSPTDSQKDMIEIPLPPWQERTDESIETKRARLLYESRKRGMLENCILLSLFAKEYLHNMTEKQLNLYDRLINEPSNDWDIYYWATEAKPAPEIFENEVMELLREFAKNKNKEQRLRAPDLEYLFEKPH
Protein: ERCC excision repair 6, chromatin remodeling factor (A0A0G2JTU1)
Organism: Rattus norvegicus (Rat)
Interaction partners:
- ERCC excision repair 8, CSA ubiquitin ligase complex subunit
- DNA excision repair protein ERCC-5
- DNA-directed RNA polymerase subunit
- DNA-directed RNA polymerase subunit beta
- DNA repair protein complementing XP-A cells homolog
- UV-stimulated scaffold protein A
- RNA polymerase-associated protein LEO1
- DNA damage-binding protein 1
- DNA-directed RNA polymerase II subunit RPB4
- DNA-directed RNA polymerase subunit
Sequence:
MPHEEIPNSTQPQGQDWLPGQHVSADRDIPAGQETAGDSEAGKCLSSPSCDHGPSTSAEACVLAATRWGPALLHIDRHQIPAVEPSAQALELQGLGVDVYDQAVLEEGVLQQVDSAMHEASRVAQRADAEKEYQSVLDDLMSCTTSLRQINKIIEQLSPQAASNRDINRKLDSVKRQKYNKEQQLKKITAKQKRLQAILGGAEVHVELDHGSLEEEDAEPGPSCLGSMLMPAQESAWEELIRTGQMTPFGTPAPQKQEKKPRKIMLNEASGFEKYLADQAQLSFKRKKQAANKRTAKKAVVVSESSRGPNETKPNQRSQALSQTDKRLKKHIRKLQRRALQFQGKVGLQRGKRPLEPEERPGAEGDTEGEESGSSPTDGEEEEEQEEEGVAVLSSDDISYELKPLRKGQKYEKKVPVQEIDDDFFPSSEEEDEAVEGRGGGRKVSRRPDDGDEDYYKQRLRRWNRLRLQDKEKLKLEDDSEESDAEFDEGFKVPGFLFKKLFKYQQTGVRWLWELHCQQAGGILGDEMGLGKTIQIIAFLAGLSYSKIRTRGSNYRFEGLGPTLIVCPTTVMHQWVKEFHTWWPPFRVAILHETGSCAHRKERLVRDIVHCHGVLITSYSYIRLMQDDISRHDWHYVILDEGHKIRNPNAAVTLACKQFRTPHRIILSGSPMQNNLRELWSLFDFTFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCACVLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFIDSKAVYRILNGENQIFSGLVALRKICNHPDLFSGGPKNTSALPEDGLEEEQFGYWKRSGKMIVVESLLKIWHKQGQRVLLFSQSRQMLHILEVFLRAHKYSYLKMDGTTTIASRQPLITKYNEDTSIFVFLLTTRVGGLGVNLTGANRVIIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQRRFFKSNDLYELFTLTSPDASQGTETSAIFAGTGSNIQTLKCHFKKRTPPVLQMDPKRKKPLVSDTSVNGATVMEEKSQGSGATGSVPSTESGPLKSDRHTDGSRASSVGFGEEADAGSTLEHLSGLSGDSPAVDHTSRLSAVASTSEKQGSSYEGECCQAQTGPVHLSEQTEGHFSKHKSKRKHDAAEEETTEKCPQPKQKAKNSRHHRDAKFEGTRVPHLVKKRRYHQQTTEQESGAKDRSSDDYVLEKLFKKSVGVHSVVKHDAIIDGSSPDYVLVEAEANRVAQDALKALRLSRQQCLGATSGVPTWTGHRGISGAPAGVKKRFGQKRNSSLPVQRPSSLTERTQNMKKEGEAHTAEHFSGKEDGASSSGAPSSSSLLARMRARNHMILPERLESDGEQLAGAAAAAAPPCSTEHDALLVDMRNFIAFQAQVDGQASTQEILQAFESKLSVAQSCVFRELLRNLCNFHRTPGGEGIWKLKPEYC
Protein: RE58929p (Q7JRE5)
Organism: Drosophila melanogaster (Fruit fly)
Subcellular location: Cytoplasm {ECO:0000256|ARBA:ARBA00004496}. Nucleus {ECO:0000256|ARBA:ARBA00004123}.
Interaction partners:
Sequence:
MSGYTDLTKLETSRNCLRRIARHDEQQFSKDSIVNVMEKFVKTVNIMDDTILVPCRLMDRQIGDSTDIIPATGKDSTANQLTQTSSAHGKRGAAHSKNVQDFLSASELFNLYNMLNSLKKDLLWTANQEDDDQQHSEQQLNASTSSTSSCNPSESKTEFNSGSPSTTASGSVKGHVRRTSTASMMSTNSVSNMSDSDSDISQENDSGLESDGNKSDNAQSSDGSDIVDVAKSKPGSGDKATELAKRCRRHLNGLYQCLEQMTEAANYLTARYQSDIGPV
Protein: Alanine--tRNA ligase (EC 6.1.1.7) (Alanyl-tRNA synthetase) (AlaRS) (Q5A8K2)
Organism: Candida albicans (strain SC5314 / ATCC MYA-2876) (Yeast)
Function: Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain.
Subcellular location: Mitochondrion {ECO:0000255|HAMAP-Rule:MF_03133, ECO:0000269|PubMed:16928688}. Cytoplasm {ECO:0000255|HAMAP-Rule:MF_03133, ECO:0000269|PubMed:16928688}.
Interaction partners:
- glycine--tRNA ligase
- threonine--tRNA ligase
- valine--tRNA ligase
- Anaphase promoting complex subunit
- Anaphase-promoting complex subunit 4
- Anaphase-promoting complex subunit 5
- Acetyl-CoA carboxylase
- glutamine--tRNA ligase
- Histidine--tRNA ligase, mitochondrial
- Anaphase promoting complex subunit
Sequence:
MIKTLLRRMSSNTTIPTPNGSNHWTASKVRSTFLDYFKKQQHTYVPSSSVVPHNDPTLLFANAGMNQYKPIFLGTVDPASDFASLKRAANSQKCIRAGGKHNDLEDVGRDSYHHTFFEMLGNWSFGDYFKKEAIDYSWELLTKVYGLQEDRLYVTYFGGDEKQGLEPDLEAKNFWLKVGVPEDHILPGSVEDNFWEMGDQGPCGPCSEIHYDRIGGRNASALVNMDDPNVLEVWNVVFIQYNREADGNLRTLPNKHIDTGMGFERLVSILQNKYSNYDTDVFLPIFDKIREITGVRPYTGKFGNEDKDGIDTAYRVIADHVRTLTFAICDGGVPNNEGRGYVLRRILRRGSRYVRKYMNYPIGGFFQQLVDVVIEQNKEIFPEISSGAQDLKEILNEEELSFAKTLDRGEKLFEQYAIIASKTPEQTLSGKDVWRLYDTYGFPVDLTRLMAEEAGLKIDEEGFERAKEESREASKGSGTKDGKTLVKLDVHALSELDQNDAIPKTNDEFKYGLENVKAKVVGIYDGSKFVDSIEDPSIQYGILLDKTPFYAEQGGQEYDTGKLVIDGKSEFNVANVQVYAGYVLHTGNIVDGKLNVGDEIIATYDELRRWPIRNNHTGTHILNFALREVLGDGVDQKGSLVAPEKLRFDFSHKQAVTAKELEKIEAISNKYIKNNDKVYYKDVSLTKAKEINGLRAVFGETYPDPVRVVSIGVSVDDLLADPTNTKWHEISIEFCGGTHVAKTGDIKDLVIIEESGIAKGIRRIVAVTGHDAHHVQKVANEFEQEIDNASSLPFGVAKESKSKELGVALKKLSISVLDKQRLTEKFNKLDKSIKDNLKAKQKEETKKTLDVVNNWLNDKENASSFLVAHVPITANAKAITEAINLIKKQDKTKSIYLLTGETDKVAHGCYVSDEAIAKGINANELAKAVSENIGGKAGGKGNIVQGMGDKPQGINTAIEEVTKLFKEKL
Protein: Response regulator (Q9FXQ7)
Organism: Zea mays (Maize)
Interaction partners:
- WUS1 protein
- Gigantea2
- Circadian clock associated1
Sequence:
MASRKCLGGEGSAPAPHVLAVDDSSVDRAVIAGILRSSQFRVTAVDSGKRALELLGTEPNVSMIITDYWMPEMTGYELLKKIKESSRLKEIPVVIMSSENVPTRINRCLEEGAEDFLLKPVRPSDVSRLCSRVLR
Protein: Putative MOB kinase activator-like 2B (Mob1 homolog 2B) (Mps one binder kinase activator-like 2B) (F4K494)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Subcellular location: Nucleus {ECO:0000269|PubMed:15469496}. Cytoplasm, cytoskeleton, phragmoplast {ECO:0000269|PubMed:15469496}.
Interaction partners:
- Protein NLP2
- Rop guanine nucleotide exchange factor 14
- Protein NLP1
- Protein NLP3
- Protein NLP9
- Protein NLP4
- Protein NLP5
- Protein NLP8
Sequence:
MKAGRYEYRWADGTTMVSAPEYVELLMNWIETQIDNEHIFPKKTGEPFPPNFEDFVKRILRKLFRVYAHIYHSHFPKIVTLNEQAHLNTCFHRYLLFVSEFQLVDKEEMVPIQKLVETILKP
Protein: Allantoate permease (P15365)
Organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Function: Component of the allantoate transport system.
Subcellular location: Membrane; Multi-pass membrane protein.
Interaction partners:
- Ammonium transporter MEP2
- Transcriptional regulator URE2
- Nitrogen regulatory protein GLN3
- General amino-acid permease GAP1
- Allantoin permease
- Malate synthase 2
- Allantoinase
- GABA-specific permease
- Urea active transporter
- Nitrogen regulatory protein DAL80
Sequence:
MSADASTNSNASLDEKNLNITSEAEIKNEDVTAEPVLSTVLSPNGKIVYISDKVDEAMKLAEEAKEIEVTPEEDRKLRWKIDYCMFPLMCILYAVQFMDKISTSSAAVMGLRTDLKMHGDQYSWVTSAFYFGYLFMNLGPVQFIFQRTSHMSKMLAVFIVIWGMLLALHAAPTVKYPSFIVLRVLLGCAESVVTPCFTIITAQYWKTEEQFTRVSIWFGMNGLGSILINAIAYGVYIHQDSYAIKGWRTLFVITGVITIFIGILIFLWIPDDPSKARFLSKREKLMVVQRIRSNQQGFGNHEIKKYQIIEALKDVRTWLYFLFTVSSNIPNGGISSFMSILLNSDFGYSSKETLLMGLPTGAVELVGCPLFGILAVYAANKKIPFWKYKLSWAIFAAVLALIASCMLGFATNSKKARLAGAYLWYISPVSFICVLSNISANSSGYSKKWTVSSINLVAYAAANLAGPQTFIAKQAPKYHGAKVAMVVCYAVMIVLLSILLIVNLRENKRRDKIAAERGFPEETENLEFSDLTDFENPNFRYTL
Protein: Chloroplast stem-loop binding protein of 41 kDa b, chloroplastic (CSP41-b) (Heteroglycan-interacting protein 1.3) (Protein CHLOROPLAST RNA BINDING) (Protein Gb5f) (Q9SA52)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Binds and cleaves RNA, particularly in stem-loops. Associates with pre-ribosomal particles in chloroplasts, and participates in chloroplast ribosomal RNA metabolism, probably during the final steps of 23S rRNA maturation. May enhance transcription by the plastid-encoded polymerase and translation in plastid via the stabilization of ribosome assembly intermediates. Required for chloroplast integrity. Involved in the regulation of the circadian system. Involved in the regulation of heteroglycans and monosaccharide mobilization. Required for full expression of genes transcribed by the plastid-encoded RNA polymerase (PEP). Essential for embryo development.
Subcellular location: Plastid, chloroplast, plastoglobule {ECO:0000269|PubMed:16461379}. Plastid, chloroplast {ECO:0000269|PubMed:18431481}. Cytoplasm. Note=Present in stromules (PubMed:16633814). In the cytoplasm, accumulates around chloroplasts (PubMed:21087810). {ECO:0000269|PubMed:16633814, ECO:0000269|PubMed:21087810}.
Interaction partners:
- Protein PLASTID REDOX INSENSITIVE 2
- Chloroplast stem-loop binding protein of 41 kDa a, chloroplastic
- PLASTID TRANSCRIPTIONALLY ACTIVE protein 6, chloroplastic
- Protein PLASTID TRANSCRIPTIONALLY ACTIVE 12, chloroplastic
- Glyceraldehyde-3-phosphate dehydrogenase GAPB, chloroplastic
- 31 kDa ribonucleoprotein, chloroplastic
- Putative chloroplast RNA binding protein family protein)
- NAD
- Sedoheptulose-1,7-bisphosphatase, chloroplastic
- Protein PLASTID TRANSCRIPTIONALLY ACTIVE 7
Sequence:
MAKMMMLQQHQPSFSLLTSSLSDFNGAKLHLQVQYKRKVHQPKGALYVSASSEKKILIMGGTRFIGLFLSRILVKEGHQVTLFTRGKSPIAKQLPGESDQDFADFSSKILHLKGDRKDYDFVKSSLSAEGFDVVYDINGREAEEVEPILEALPKLEQYIYCSSAGVYLKSDILPHCEEDAVDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPVPNSGIQISQLGHVKDLATAFLNVLGNEKASREIFNISGEKYVTFDGLAKACAKAGGFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLTDSYNLDFGRGTFRKEADFTTDDMILSKKLVLQ
Protein: Glycosaminoglycan xylosylkinase (EC 2.7.1.-) (Xylose kinase) (Q5RH51)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Function: Responsible for the 2-O-phosphorylation of xylose in the glycosaminoglycan-protein linkage region of proteoglycans thereby regulating the amount of mature GAG chains. Sulfated glycosaminoglycans (GAGs), including heparan sulfate and chondroitin sulfate, are synthesized on the so-called common GAG-protein linkage region (GlcUAbeta1-3Galbeta1-3Galbeta1-4Xylbeta1-O-Ser) of core proteins, which is formed by the stepwise addition of monosaccharide residues by the respective specific glycosyltransferases (By similarity).
Subcellular location: Golgi apparatus membrane {ECO:0000250|UniProtKB:O75063}; Single-pass type II membrane protein {ECO:0000250|UniProtKB:O75063}.
Interaction partners:
- Xylosyltransferase I.
- Golgi-associated kinase 1A
- UDP-glucuronic acid decarboxylase 1
- Xylosyltransferase II.
- 2-phosphoxylose phosphatase 1
- Four-jointed box kinase 1.
- Exostosin-like 2
- Xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7
- Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase
- Modulator of smoothened a
Sequence:
MKLKQRVVVLCAVLFLLGLAKVFLLDGGEGSAASRRDLRAFRKMEASLSLAKGARLTHTLQSPWEVAAQWVGPREVYPDETPELAAVLNALATAHVERADVGYKGTQLKALLVLDGGQKVVFKPKRYVRDYVVEGEPYAGYDRHNAEIAAFHLDRILGFRRAPLVVGRFMNLRTEIKPVATDQLLSTFLMHGNNTCFYGKCYYCRETEPACAEGDVMEGSVTLWLPDVWPLQKHRHPWGRTYREGKLARWEYDESYCEAVKKMPPYDAGPRLLDVIDTSIFDYLIGNADRHHYESFQDDGGASMLILLDNAKSFGNPSLDERSILAPLYQCCMVRVSTWNRLNLLKGGVLSSAMRQATAHDPAFPVLTGAHLTALDRRLNGVLATVRQCMETQGSENTLIEDRMNLPHP
Protein: UDP-glucuronosyltransferase (EC 2.4.1.17) (D3XD87)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Subcellular location: Membrane {ECO:0000256|RuleBase:RU362059}; Single-pass membrane protein {ECO:0000256|RuleBase:RU362059}.
Interaction partners:
Sequence:
MRLVVCFLSLLTVFSAGECGNILVWHTEGSHWINLKIVLDTLLDRGHNVTVLMPDGALFMKAKESDRFSYQNFSVSTSAQDMQDFLDELLHFSVFEMEQLNLLQIQMKFFDLGSRHQDMGLSYCDGILKSPELMDKLKTGKFDVLLSDPMYPCSDIVAEELNVPLVFTLRFSIAHTMERMCGQIPAPPSYVPGAMSKLTDKMSFTERIFNTLFYLSMDTFSVIAWKKFDNYYTELFGRPTSYCEMMGRADIWLIRTYWDFEFPRPFVPNFKYIGGLHCTPAKPLPKDMEEFVQSSGDDGIVVFTLGSMIDKVPKEMSNRIASALAQIPQKVLWRYGGEKPDTLGENTRIYKWMPQNDLLGHPKTRAFITHGGTNGIYEAIYHGVPMVGIPLFGDQPDNMVHMTTRGAAVVVDSIKSMQPQELVDKLNTVINDPSYKENAMRLSRIHHDRPMKPLDESVFWIEFVMRNKGAKHLRVEAHNLTWYQYHCLDVFAFLTTVLTLVLYICFKMAKFFIMRCCFRSKRKSKKE
Protein: Nuclear factor 1 (U3KQE8)
Organism: Homo sapiens (Human)
Subcellular location: Nucleus {ECO:0000256|ARBA:ARBA00004123, ECO:0000256|RuleBase:RU000690}.
Interaction partners:
Sequence:
MQYSAMDEFHPFIEALLPHVRAIAYTWFNLQARKRKYFKKHEKRMSKDEERAVKDELLSEKPEIKQKWASRLLAKLRKDIRQEYREDFVLTVTGKKHPCCVLSNPDQKGKIRRIDCLRQADKVWRLDLVMVILFKGIPLESTDGERLMKSPHCTNPALCVQPHHITVSVKELDLFLAYYVQEQDSGQSGSPSHNDPAKNPPGYLEDSFVKSGVFNVSELVRVSRTPITQGTGVNFPIGEIPSQPYYHDMNSGVNLQRSLSSPPSSKRPKTISIDENMEPSPTGDFYPSPSSPAAGSRTWHERDQDMSSPTTMKKPEKPLFSSASPQDSSPRLSTFPQHHHPGIPGVAHSVISTRTPPPPSPLPFPTQAILPPAPSSYFSHPTIRYPPHLNPQDTLKNYVPSYDPSSPQTSQSWYLG
Protein: procollagen-proline 4-dioxygenase (EC 1.14.11.2) (Q9VA69)
Organism: Drosophila melanogaster (Fruit fly)
Subcellular location: Endoplasmic reticulum lumen {ECO:0000256|ARBA:ARBA00004319}.
Interaction partners:
- Procollagen-lysine,2-oxoglutarate 5-dioxygenase
Sequence:
MAADWRLMLLLGILLLVGGPANGEVYTALAEMEELLETESVLITNLEGYIRVQEDKLNFLKNKMDEYQREHSDASHDITAYVSNPINAYLLTKRLTTDWRQVENLMEHDVGTDFLQNITQYRSLLKFPSDEDLNGAAVALLRLQDTYQLDTSSVARGKLNGIQYSTEMSSDDCFELGRQSYVNHDYYHTVLWMNEAMARMLEEPTNHTQSFTKADILEYLAFSTYKEGNIESALTMTNELLQLLPHHERANGNKRFYEKEIAQQLQLRKMKGDDGTDEMPKSDLPVAKSDPAIFDMTERRAYEMLCRGELKPSPSDLRSLRCRYVTNRVPFLRLGPLKLEEVHADPYIVIYHDAMYDSEIDLIKRMARPRFRRATVQNSVTGALETANYRISKSAWLKTQEDRVIETVVQRTADMTGLDMDSAEELQVVNYGIGGHYEPHFDFARKEEQRAFEGLNLGNRIATVLFYMSDVEQGGATVFTSLHTALFPKKGTAAFWMNLHRDGQGDVRTRHAACPVLTGTKWVSNKWIHERGQEFRRPCDLEEDHGEFAI
Protein: LD21074p (Programmed cell death 4, isoform A) (Programmed cell death 4, isoform B) (Programmed cell death 4, isoform C) (Programmed cell death 4, isoform D) (Q9VY91)
Organism: Drosophila melanogaster (Fruit fly)
Subcellular location: Cytoplasm {ECO:0000256|ARBA:ARBA00004496}.
Interaction partners:
- Eukaryotic initiation factor 4A
- FI21605p1
- Eukaryotic initiation factor 4B
- Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN
- Eukaryotic translation initiation factor 4G1, isoform B
Sequence:
MEVESNNKRATNGGRHFTPPSDSDSKESSVERELNEEIEAVELNGSGGGGHSNGHVKKLMAVEDGRIKRKAKRLIQRQNSGSGGSANQTNGNGAAGAGGAHGASVMPLGINRIMPSPGGYVVPHRRWKNSRRSRTINRGRGLPKKGGGGGKGVWGLPGSEALAEVYEDENDPNYDSECNDRNVELREVITEITREEFFKLAEPIVLEYYEHGDPHEVALSFDEILQAPMREHVTSILVEIAMDHKDSQREMTSVLISDLYGRVITGKDIEKGFNMLLANLPDLVLDTPEAPIMLGNFMARAVADDCIPPKFVAKSGEELRHLGLGEHAEQALRRADSLIYKHVWAHLDNVWGMGGPLRPVKTITMQMELLLKEYLSSRDVAEAQRCLRALEVPHYHHELVYEAIVMTLESLSQTTEEAMCELLKQLDLTCLVLPAGMEQGFLRAFDDMADIVLDVPLAYIILDRFVERCNRAGFLTDKIINNVPSRGRKRFVSEGDGGHVKPTTFTMRD
Protein: Mitogen-activated protein kinase (EC 2.7.11.24) (Q23994)
Organism: Drosophila melanogaster (Fruit fly)
Interaction partners:
Sequence:
MSVSMSLVQGGAAGGAPQGASAILAAAAPYYQPPAVPQDVQPDRPIGYGAFGVVWAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHENVLSALDILQPPHLDFFQEIYVITELLQSDLHKIIVSPQHLSADHIKVFLYQILRGLKYLHSARILHRDIKPGNLLVNSNCVLKICDFGLARVEEPDQAKHMTQEVVTQYYRAPEILMGARHYSSAVDVWSVGCIFGELLGRRILFQAQNPVQQLELITELLGTPTMEDMRHACEGARTHMLRRAPKPPSFSVLYTLSSHATHEAVHLLCQMLVFDPDKRISVTDALAHPYLDEGRLRYHSCMCKCCFTTSAGMRQYTADFEPSAGQPFDDLWERKLTSVQQVKEEMHKFIAEQLQTGRVPLCINPQSAAFKSFGSSTVAHPSELPAVASPMGMTAK
Protein: AXIN1 up-regulated 1, isoform A (AXIN1 up-regulated 1, isoform B) (AXIN1 up-regulated 1, isoform C) (AXIN1 up-regulated 1, isoform D) (BcDNA.GH09817) (Q9U4G5)
Organism: Drosophila melanogaster (Fruit fly)
Subcellular location: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
Interaction partners:
Sequence:
MFSPIKKIFTYIQKNASGSNMFSPSGNKAAGQREGTTSLTAHDEGERKDQRHLDHKDNQSEPEERQHQLQIFPHLDDDDDDIERQIKTSIIDASKVHAAKAKALASLPMPLEQLDDELADFAHGPADTELEEQFLELENYPNNEIIVLGDADLNSSIASDAVSEDPLAIDNILDSASVTTNEEVDTSGELLWLKLNNETEMATRSAEVVSNNQASLEPAQPAKPKEDELRDGGSDSGLGSETSALLKDQAEKEAEPEIQKKVETKPIRSNLKRRLEDSESDAIDLVPDMSAPPVAPQKRTKRSINFDEVKVFYFPRQQGFSCVPTAGGCTLGMGARHVGFKTMTLAEHAAELRRAHRSQNQELQPRGSSSDDSEESEEDYLSEGSGSDAEDGSNGFLQPVTPKQRRALLKAAGVRKIDASEKSECRDIRNSREVCGCSCREFCDPETCACSQAGIKCQVDRAMFPCGCTREACGNTVGRVEFNPTRVRTHYIHTVMRLDLEQRQGSVQGVQGGHLQPQQQQPSQQTIGYSPVGTAGSTSAYFLQTQSNYSSGYASPAYTPESSVSYYQQQVQQPGVPTAGQLIPQQQQAQSQSYAGYAQLDSLDSGLFASGSNATPSYGELYQSLSYGSTQITSYTAAYQQHSASPAVAVAPGAPSSCAYSSCAVPSVPPYGNATTTASSNVPYQTTAVSMTAASTSASPSRLVGNPVGSATASPATVSSSPATASGNEFISLSTPIASSSRLSQINDLLQHNRNTTAALVAVSEGLSGGRTSSSASTIDSIDTPPIVDDGQQRGCMSFEALPPPLVNPAPIVAVVENKLPPMALPAPHAPPSAPQPRQPLEQHHPATSESS
Protein: Inhibitor of growth family member 2 (C9J4X5)
Organism: Homo sapiens (Human)
Interaction partners:
Sequence:
MDQDGDQQLGPSRILAPQTLKEIDDVYEKYKKEDDLNQKKRLQQLLQRALINSQELGDEKIQIVTQMLELVENRARQMELHSQCFQDPAESERASDKAKMDSSQPERSSRRPRRQRTSESRDLCHMANGIEDCDDQPP
Protein: Golgi associated PDZ and coiled-coil motif containing (Golgi-associated PDZ and coiled-coil motif containing protein transcript variant 3) (F5H1Y4)
Organism: Homo sapiens (Human)
Interaction partners:
Sequence:
MSAGGPCPAAAGGGPGGASCSVGAPGGVSMFRWLEVLEKEFDKAFVDVDLLLGEIDPDQADITYEGRQKMTSLSSCFAQLCHKAQSVSQINHKLEAQLVDLKSELTETQAEKVVLEKEVHDQLLQLHSIQLQLHAKTGQSADSGTIKAKLSGPSVEELERELEANKKEKMKEAQLEAEVKLLRKENEALRRHIAVLQAEVYGARLAAKYLDKELAGRVQQIQLLGRDMKGPAHDKLWNQLEAEIHLHRHKTVIRACRGRNDLKRPMQAPPGHDQDSLKKSQGVGPIRKVLLLKEDHEGLGISITRGEIEFEVVYVAPEVDSDDENVEYEDESGHRYRLYLDELEGGGNPGASCKDTSGEIKVLQGFNKKAVTDTHENGDLGTASETPLDDGASKLDDLHTLYHKKSY
Protein: ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) (M0R208)
Organism: Homo sapiens (Human)
Interaction partners:
Sequence:
MGPIDDSVASLVIAQLLFLQSESNKKPIHMYINSPGGVVTAGLAIYDTMQYILNPICTWCVGQAASMGSLLLAAGTPGMRHSLPNSRIMIHQPSGGARGQATDIAIQAEEIMKLKKQLYNIYAKHTKQSLQVIESAMERDRYMSPMEAQEFGILDKVLVHPPQDGEDEPTLVQKEPVEAAPAAEPVPAST