wanglab/gogpt-training-data huggingface dataset:
Protein: Apurinic-apyrimidinic endonuclease 1 (PbApn1) (EC 3.1.21.-) (A0A509ASK2)
Organism: Plasmodium berghei (strain Anka)
Function: Plays a role in mitochondrial DNA base excision repair (BER) pathway induced by oxidative stress. Has apurinic/apyrimidinic (AP) endonuclease activity towards double-stranded DNA (dsDNA) with a preference for C as opposite base. Has 3'-phosphatase activity; removes 3'-phosphate from blunt-end, recessed, and gapped DNA templates and thus, removes 3'-blocks for DNA polymerase activity during BER. Lacks 3'-5' exonuclease activity and does not cleave damaged bases by nucleotide incision repair (NIR).
Subcellular location: Mitochondrion {ECO:0000269|PubMed:33711786}.
Interaction partners:
- Endonuclease III homolog lyase)
- DNA-
- Endonuclease/exonuclease/phosphatase family protein, putative
- Uracil-DNA glycosylase
- DNA repair endonuclease XPF, putative
- ERCC1 nucleotide excision repair protein, putative
- DNA-
- DNA repair protein RAD14, putative
Sequence:
MPRHCCCFVFHFLLYMLLINIVKNNIITAFSHRHQALRERKNIFSNSPINYIYYLGANKHIYSKFSSVCEQKKLAHKKIAIKKWGIERNEKKKFTISLNNYNKIQQSKFMSKMVKENKASTKNENKCSINNTQDIRNFMNLKKEEKDEECDEKTKQDNNKENIKNETIVQKKKIDKNNKTKEKIKTKSETNKNTNITYPSIPKSIEKRWADYKKIIEYAKSTNVYLGAHISASGGVQNAPINSFNVSGLAFALFLKNQRKWESPPLTEENIKQFNENCKKYNFDKNLILPHGSYLINLANPDKEKREKSYLSFVDDIKRCEQLNIKLYNFHPGSTVGMCSTEQGIKNISDCINRAHKETSNVIIVLENSAGQKNSIGSKFEHLRDIISQIDDKERIGVCLDTCHTFAAGYDIKSYEKFEEVMNNFHNIVDSKYLKAVHLNDSKSDLGSGLDRHENIGKGKLTLDTFKYIMTSKYFKNIPIVLETPDITNDESVYKYEIEYLYKMCAKEQ
Protein: Polypyrimidine tract-binding protein 2 (Brain-enriched polypyrimidine tract-binding protein) (Brain-enriched PTB) (Neural polypyrimidine tract-binding protein) (RRM-type RNA-binding protein brPTB) (Q91Z31)
Organism: Mus musculus (Mouse)
Function: RNA-binding protein which binds to intronic polypyrimidine tracts and mediates negative regulation of exons splicing. May antagonize in a tissue-specific manner the ability of NOVA1 to activate exon selection. In addition to its function in pre-mRNA splicing, also plays a role in the regulation of translation.
Subcellular location: Nucleus {ECO:0000269|PubMed:10829067}.
Interaction partners:
- Splicing factor, proline- and glutamine-rich
- RNA-binding protein Nova-1
- RNA-binding protein Nova-2
- Serine/arginine repetitive matrix protein 4
- KH domain-containing, RNA-binding, signal transduction-associated protein 1
- Far upstream element-binding protein 2
- RNA binding protein fox-1 homolog 1
- RNA binding protein fox-1 homolog 2
- Beta-catenin-like protein 1
Sequence:
MDGIVTEVAVGVKRGSDELLSGSVLSSPNSNMSGMVVTANGNDSKKFKGEDKMDGAPSRVLHIRKLPGEVTETEVIALGLPFGKVTNILMLKGKNQAFLELATEEAAITMVNYYSAVTPHLRNQPIYIQYSNHKELKTDNTLNQRAQVVLQAVTAVQTANTPLSGTTVSESAVTPAQSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDGQNIYNACCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAAFAKETSLLAVPGALSPLAIPNAAAAAAAAAAGRVGMPGVSAGGNTVLLVSNLNEEMVTPQSLFTLFGVYGDVQRVKILYNKKDSALIQMADGNQSQLAMNHLNGQKMYGKIIRVTLSKHQTVQLPREGLDDQGLTKDFGNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVAEEDLRTLFANTGGTVKAFKFFQDHKMALLQMATVEEAIQALIDLHNYNLGENHHLRVSFSKSTI
Protein: Molecular chaperone MKKS (Bardet-Biedl syndrome 6 protein) (McKusick-Kaufman/Bardet-Biedl syndromes putative chaperonin) (Q9NPJ1)
Organism: Homo sapiens (Human)
Function: Probable molecular chaperone that assists the folding of proteins upon ATP hydrolysis. Plays a role in the assembly of BBSome, a complex involved in ciliogenesis regulating transports vesicles to the cilia. May play a role in protein processing in limb, cardiac and reproductive system development. May play a role in cytokinesis.
Subcellular location: Cytoplasm, cytoskeleton, microtubule organizing center, centrosome. Cytoplasm, cytosol {ECO:0000269|PubMed:28753627}. Nucleus {ECO:0000269|PubMed:28753627}. Note=The majority of the protein resides within the pericentriolar material (PCM), a proteinaceous tube surrounding centrioles. During interphase, the protein is confined to the lateral surfaces of the PCM but during mitosis it relocalizes throughout the PCM and is found at the intercellular bridge. The MKSS protein is highly mobile and rapidly shuttles between the cytosol and centrosome.
Interaction partners:
- T-complex protein 1 subunit beta
- T-complex protein 1 subunit epsilon
- T-complex protein 1 subunit theta
- Chaperonin-containing T-complex member BBS12
- T-complex protein 1 subunit gamma
- T-complex protein 1 subunit delta
- BBSome complex assembly protein BBS10
- T-complex protein 1 subunit alpha
- T-complex protein 1 subunit eta
- 10 kDa heat shock protein, mitochondrial
Sequence:
MSRLEAKKPSLCKSEPLTTERVRTTLSVLKRIVTSCYGPSGRLKQLHNGFGGYVCTTSQSSALLSHLLVTHPILKILTASIQNHVSSFSDCGLFTAILCCNLIENVQRLGLTPTTVIRLNKHLLSLCISYLKSETCGCRIPVDFSSTQILLCLVRSILTSKPACMLTRKETEHVSALILRAFLLTIPENAEGHIILGKSLIVPLKGQRVIDSTVLPGILIEMSEVQLMRLLPIKKSTALKVALFCTTLSGDTSDTGEGTVVVSYGVSLENAVLDQLLNLGRQLISDHVDLVLCQKVIHPSLKQFLNMHRIIAIDRIGVTLMEPLTKMTGTQPIGSLGSICPNSYGSVKDVCTAKFGSKHFFHLIPNEATICSLLLCNRNDTAWDELKLTCQTALHVLQLTLKEPWALLGGGCTETHLAAYIRHKTHNDPESILKDDECTQTELQLIAEAFCSALESVVGSLEHDGGEILTDMKYGHLWSVQADSPCVANWPDLLSQCGCGLYNSQEELNWSFLRSTRRPFVPQSCLPHEAVGSASNLTLDCLTAKLSGLQVAVETANLILDLSYVIEDKN
Protein: SAM-dependent MTase RsmB/NOP-type domain-containing protein (Q38AT8)
Organism: Trypanosoma brucei brucei (strain 927/4 GUTat10.1)
Interaction partners:
- Nucleolar complex protein 2
- 60S ribosome subunit biogenesis protein NIP7 homolog
- RNA-binding protein, putative
- Nucleolar GTP-binding protein 1
- Methionyl-trna formyltransferase
Sequence:
MQPLQATEQTKKKLKSFGKNRREIRVRTTYDEKGNWMAVNNPDKLRQTECPALDRYYRDLQRLCTPQEWGDEMALFRQPLPTTFWINDTDPLAPEISRYFESLPDTVVEAIPWYPIRGMAWRIKAGKTEFRRPEMKELRSFLIRHTAIGTVSRQEEVSMLPPFLLDIQPTDKCLDMCASPGSKTAQILVSLGRHKVVPHDSDASPFPFDYDSEGLVVANDIDTKRANMLVHQVKRMRLLFPFALFTNHDAQFFPNMVLTPGEAQPHTCGQQTTGDDGATELRFDKILCDVVCSGDGTIRKAPHILKMWSPREAISLQKVQIQIALRACHLLRVGGRLVYSTCSMNPIENEAVVAQIIHRTKGAMKLIDCSSLLPGLRFTPGLQKWVVTNSKGNVVEAPCQEAHEALFPPGTPGAYSSDAVDAMDLRLCLRLLPSHCNGGAFFIAVLSKVSEFRFHKHDETTQPAITVPAHSARIFEREDNTSVDTEVTQDGLPLGKREREENALDLAKDEVRGRGVPPQFVAAPEPIINVITDFYRVSSFPTRLLVVRTANGQRELKLSGGSVCSIVSRSALEVLQHKTDTLIVVSAGLRVFAHENLDGGWRIASESAVLFSKLMSQSPRRLCVHVSLVERLLQGGKLKDIPFNDIEDEAVRFQLESMDIGTVLLKIEAPGAVGGVLYSVALRARKRLQLLVDQEDIVGLRLRLGLPATEAAKVEDTNAQQGEGGVIPADCAEEGAERIP
Protein: Adenosine 5'-phosphosulfate reductase (APS reductase) (EC 1.8.4.10) (5'-adenylylsulfate reductase) (Thioredoxin-dependent 5'-adenylylsulfate reductase) (P9WIK3)
Organism: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Function: Catalyzes the formation of sulfite from adenosine 5'-phosphosulfate (APS) using thioredoxin as an electron donor.
Subcellular location: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00063}.
Interaction partners:
- Bifunctional enzyme CysN/CysC
- Sulfite reductase [ferredoxin]
- Ferrochelatase Che1
- 3'-phosphoadenosine 5'-phosphate phosphatase
- Probable gamma-glutamyltranspeptidase GgtB
- Sulfate adenylyltransferase subunit 2
- uroporphyrinogen-III C-methyltransferase
- Putative thiosulfate sulfurtransferase
- Putative thiosulfate sulfurtransferase SseA
- Putative thiosulfate sulfurtransferase SseB
Sequence:
MSGETTRLTEPQLRELAARGAAELDGATATDMLRWTDETFGDIGGAGGGVSGHRGWTTCNYVVASNMADAVLVDLAAKVRPGVPVIFLDTGYHFVETIGTRDAIESVYDVRVLNVTPEHTVAEQDELLGKDLFARNPHECCRLRKVVPLGKTLRGYSAWVTGLRRVDAPTRANAPLVSFDETFKLVKVNPLAAWTDQDVQEYIADNDVLVNPLVREGYPSIGCAPCTAKPAEGADPRSGRWQGLAKTECGLHAS
Protein: TRAF family member associated NFKB activator (E7EVA2)
Organism: Homo sapiens (Human)
Interaction partners:
Sequence:
MLLTSYNKGEMVVKEVKKRREIEGKENDLPSYRGWNTHPNERPVIYSILYSDATGRRGMDKNIGEQLNKAYEAFRQACMDRDSAVKELQQKTENYEQRIREQQEQLSLQQTIIDKLKSQLLLVNSTQDNNYGCVPLLEDSETRKNNLTLDQPQDKVISGIAREKLPKVRRQEVSSPRKETSARSLGSPLLHERGNIEKTFWDLKEEFHKICMLAKAQKDHLSKLNIPDTATAHLEALS
Protein: Esterase YqiA (EC 3.1.-.-) (P0A8Z7)
Organism: Escherichia coli (strain K12)
Function: Displays esterase activity toward palmitoyl-CoA and pNP-butyrate.
Interaction partners:
- 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA
- 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase
- Esterase YpfH
- Esterase FrsA
- Esterase YbfF
- Uncharacterized protein YqiB
- Esterase YjfP
- S-formylglutathione hydrolase YeiG
- Outer membrane protein TolC
- ADP-ribose pyrophosphatase
Sequence:
MSTLLYLHGFNSSPRSAKASLLKNWLAEHHPDVEMIIPQLPPYPSDAAELLESIVLEHGGDSLGIVGSSLGGYYATWLSQCFMLPAVVVNPAVRPFELLTDYLGQNENPYTGQQYVLESRHIYDLKVMQIDPLEAPDLIWLLQQTGDEVLDYRQAVAYYASCRQTVIEGGNHAFTGFEDYFNPIVDFLGLHHL
Protein: Shaggy-related protein kinase GSK1 (EC 2.7.11.1) (Glycogen synthase kinase3-like protein 1) (OsGSK1) (Shaggy/GSK3-like kinase 21) (OsSK21) (Q9LWN0)
Organism: Oryza sativa subsp. japonica (Rice)
Function: Probable serine-threonine kinase that may act as a negative regulator of brassinosteroid (BR) signaling during flower development. May have physiological roles in stress signal-transduction pathways. Phosphorylates LIC in response to BR perception.
Interaction partners:
- protein-serine/threonine phosphatase
- Os01g0185400 protein
- non-specific serine/threonine protein kinase
- Shaggy-related protein kinase GSK2
- Shaggy-related protein kinase GSK4
- Protein BZR1 homolog 1
- Os09g0261400 protein
- Uridine kinase
- Uridine kinase
- Phosphoribulokinase
Sequence:
MEAPPGPEPMELDAPPPPAAVAAAAATAGISEKVLQKKEEGGGDAVTGHIISTTIGGKNGEPKRTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRAMEHPNVICLKHCFFSTTSRDELFLNLVMEYVPETLYRVLKHYSNANQRMPLIYVKLYIYQLFRGLAYIHTVPGVCHRDVKPQNVLVDPLTHQVKLCDFGSAKVLVPGEPNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGESAVDQLVEIIKVLGTPTREEIRCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAIDLASRLLQYSPSLRCTALDACAHSFFDELREPNARLPNGRPFPPLFNFKHELASASPELIHRLIPDHIRRQHGLNFAHAGS
Protein: Tripartite motif-containing 25 (D4A9N5)
Organism: Rattus norvegicus (Rat)
Interaction partners:
- Antiviral innate immune response receptor RIG-I
- Ubiquitin/ISG15-conjugating enzyme E2 L6
- Ubiquitin-conjugating enzyme E2 N
- Interferon-induced helicase C domain-containing protein 1
- Interferon-induced, double-stranded RNA-activated protein kinase
- Ubiquitin-like modifier activating enzyme 7
- Ubiquitin-ribosomal protein eL40 fusion protein
- Mitochondrial antiviral-signaling protein
- Interferon regulatory factor 3
- Polyubiquitin-C
Sequence:
MAELFPLAEELSCSICLEPFKEPVTTPCGHNFCRSCLNETWVVQGPPYRCPQCRTVYQVRPQLHKNTVLCAVVEQFLQAEQARTPVDDWIPPTRSAASSSDTQVSCDHCLKEVAVKTCLVCMASFCQEHLRPHIDSPAFQDHPLQPPVRDLLRRKCSRHNRLREMFCPEHGECICHICLVEHKTCSPTILSQASADLENKLRQKLTIMYSHINGASKALEDVKSKQQNVQESMKRKMLQLRQEYLEMKAVIDAAETSSTHKLKEEEKRVYGKLDTIYQVLLKKKNEMQNLKAEVELILAKGDEFEFLEKAAKLQEVSTKPVYIPKIDLDHDLIKGVYQGALDLKSELKLSLKQLQEKKAEEPCNSGNVGDHAQSTSKPTRPAKKTAPDKKTKKTPGAAGAAGAAGAAGAAGPTSYSSSSNKLPTFGAPGQATIPDATLKPNAPQPNSAAVKAKVLENFLTMSRTELLEYFVKVVFDYNTAHNKVALADNYTTASVADGLQHYRSHPQRFTYCSQVLGLHCYKKGIHYWEVELQKNNFCGVGVCYGSMDRQGPESRLGRNPSSWCVEWFNNKISAWHNNVEKTLPSTKATRVGVLLNCDHGFVIFFAVTEKVYLMYKFKVDFTEALYPAFWVFSAGTTLSICSK
Protein: AP2-like ethylene-responsive transcription factor AIL5 (Protein AINTEGUMENTA-LIKE 5) (Q6PQQ3)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). Involved in the regulation of floral organs size.
Subcellular location: Nucleus {ECO:0000305}.
Interaction partners:
- Polyol transporter 5
- Probable polyol transporter 3
- At3g57000
- Uncharacterized protein At5g06590
- Agamous-like MADS-box protein AGL15
- B3 domain-containing transcription factor LEC2
- Protein TIME FOR COFFEE
- TIC-like protein
- Probable polyol transporter 4
Sequence:
MKNNNNKSSSSSSYDSSLSPSSSSSSHQNWLSFSLSNNNNNFNSSSNPNLTSSTSDHHHPHPSHLSLFQAFSTSPVERQDGSPGVSPSDATAVLSVYPGGPKLENFLGGGASTTTTRPMQQVQSLGGVVFSSDLQPPLHPPSAAEIYDSELKSIAASFLGNYSGGHSSEVSSVHKQQPNPLAVSEASPTPKKNVESFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQVYLGGYDKEDKAARAYDLAALKYWGPTTTTNFPISNYESELEEMKHMTRQEFVASLRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGLNAVTNFDISRYDVKSIASCNLPVGGLMPKPSPATAAADKTVDLSPSDSPSLTTPSLTFNVATPVNDHGGTFYHTGIPIKPDPADHYWSNIFGFQANPKAEMRPLANFGSDLHNPSPGYAIMPVMQEGENNFGGSFVGSDGYNNHSAASNPVSAIPLSSTTTMSNGNEGYGGNINWINNNISSSYQTAKSNLSVLHTPVFGLE
Protein: Putative nucleotidyltransferase MAB21L1 (EC 2.7.7.-) (Protein mab-21-like 1) (O70299)
Organism: Mus musculus (Mouse)
Function: Putative nucleotidyltransferase required for several aspects of embryonic development including normal development of the eye, notochord, neural tube and other organ tissues, and for embryonic turning. It is unclear whether it displays nucleotidyltransferase activity in vivo (By similarity). Binds single-stranded RNA (ssRNA) (By similarity).
Subcellular location: Nucleus {ECO:0000269|PubMed:10556287}.
Interaction partners:
Sequence:
MIAAQAKLVYHLNKYYNEKCQARKAAIAKTIREVCKVVSDVLKEVEVQEPRFISSLNEMDNRYEGLEVISPTEFEVVLYLNQMGVFNFVDDGSLPGCAVLKLSDGRKRSMSLWVEFITASGYLSARKIRSRFQTLVAQAVDKCSYRDVVKMVADTSEVKLRIRDRYVVQITPAFKCTGIWPRSAAHWPLPHIPWPGPNRVAEVKAEGFNLLSKECHSLAGKQSSAESDAWVLQFAEAENRLQMGGCRKKCLSILKTLRDRHLELPGQPLNNYHMKTLVSYECEKHPRESDWDESCLGDRLNGILLQLISCLQCRRCPHYFLPNLDLFQGKPHSALENAAKQTWRLAREILTNPKSLEKL
Protein: Histone H2B.11 (HTB4) (P40283)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
Subcellular location: Nucleus. Chromosome.
Interaction partners:
- Histone H4
- E3 ubiquitin-protein ligase BRE1-like 1
- E3 ubiquitin-protein ligase BRE1-like 2
- Histone H3.1
- Histone H3.3
- Histone H3-like centromeric protein CENH3
- Histone H3-like 5
- Histone H3-like 1
- Histone H3-like 2
- Histone H3-like 3
Sequence:
MAPKAEKKPAEKKPASEKPVEEKSKAEKAPAEKKPKAGKKLPKEAGAGGDKKKKMKKKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Protein: Protein NASP homolog 1 (Q17886)
Organism: Caenorhabditis elegans
Function: Promotes normal hermaphrodite (XX) development, in concert with zinc finger protein tra-4 and histone deacetylase hda-1, perhaps as components of a complex. May act redundantly with nasp-2. Involved in innate immune response to B.thuringiensis strain DB27 and S.aureus bacteria. May play a role in the uptake or spreading of dsRNA.
Subcellular location: Nucleus {ECO:0000305}.
Interaction partners:
- Nematode cuticle collagen N-terminal domain-containing protein
- Probable histone chaperone asf-1
- Histone acetyltransferase type B catalytic subunit
- Zinc finger protein tra-4
- Probable histone chaperone asf-1-like protein
- Pre-mRNA-processing factor 19
- Probable histone-binding protein rba-1
- Probable histone-binding protein lin-53
- FACT complex subunit spt-16
- RING-type domain-containing protein
Sequence:
MDTENIADASDIRVKDASGDSDEKGNGTTTEEETVEQKEKRLAELLAAGRRALKVNDIDKASDSLSEATELSSEIYGENHENTFDSLYYYGMATLELAKEESQLLKGPGEKESGDEEQAGNSDDKTDEENGETEKEDGEESGEEEDDDDDTMKLSWEILETARCIAAAKIEALEAEQSGISAIEEWNLKLADVLVLLGEHGISDGKYTQAFEDLDRALNIQRNVLPPSSRKIAQTYILIGNACASDANYDETVQYFGKTKDVLIARQTELKHELERGVDDKEKKSEFENELKELEEMMPGVEEMIADAVHSAAQVEETKKAIKAQFEGFTQVLAKLPQEAGDQKEANDISSLVRRPAKRAVDAPTDNQAVKKEKEEEGTTSI
Protein: TrwJ protein (O50331)
Organism: Escherichia coli
Interaction partners:
Sequence:
MKKLVMTAAVAAILGAASPVMAQGIPVFDGTRALDFVQQFARMKEQLDTAKDQLAEAQRMYEAVTGGRGLGDLMRNAQLREYLPDDLRTVYDSANGGGYSGISGSINDILRDERLNGSVADMRRSIEERSRTARTTDKAVGCGPTKGHSNASRRLKDEISRTQDQKAIEELQARIAGEQAAIQNETTKLQMIAQLRQAEQALISEQRRERNMPILSSGNQGMPTIQ
Protein: Proteasome subunit alpha type-6 (20S proteasome alpha subunit A) (20S proteasome subunit alpha-1) (Q9XG77)
Organism: Nicotiana tabacum (Common tobacco)
Function: The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity (By similarity).
Subcellular location: Cytoplasm {ECO:0000250}. Nucleus {ECO:0000250}.
Interaction partners:
- Proteasome subunit beta
- Proteasome subunit alpha type
- Proteasome subunit alpha type
- Proteasome subunit alpha type
- Proteasome subunit alpha type
- Proteasome subunit alpha type
- Proteasome subunit alpha type
- Proteasome subunit alpha type
- Proteasome subunit alpha type
- Proteasome subunit alpha type
Sequence:
MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGKDSVCVVTQKKVPDKLLDQTSVSHLFPITKYLGLLATGMTADARTLVQQARNEAAEFRFKYGYEMPVDVLSKWIADKSQVYTQHAYMRPLGVVAMILGIDEEKGPQLFKCDPAGHFFGHKATSAGSKEQEAINFLEKKMKNDPAFSYEETVQTAISALQSVLQEDFKASEIEVGVVKKEDPIFRVLTTEEIDEHLTAISERD
Protein: ribonuclease III (EC 3.1.26.3) (Q2Q3V7)
Organism: Drosophila melanogaster (Fruit fly)
Interaction partners:
Sequence:
PRGYQLRLVDHLTKSNGIVYLPTGSGKTFVAILVLKRFSQDFDKPIESGGKRALFMCNTVELARQQAMAVRRCTNFKVGFYVGEQGVDDWTRGMWSDEIKKNQVLVGTAQVFLDMVTQTYVALSSLSVVIIDECHHGTGHHPFREFMRLFTIANQTKLPRVVGLTGVLIKGNEITNVATKLKELEITYRGNIITVSDTKEMENVMLYATKPTEVMVSFPHQEQVLTVTRLISAEIEKFYVSLDLMNIGVQPIRRSKSLQCLRDPSKKSFVKQLFNDFLYQMKEYGIYAASIAIISLIVEFDIKRRQAETLSVKLMHRTALTLCEKIRHLLVQKLQDMTYDDDDDNVNTEEVIMNFSTPKVQRFLMSLKVSFADKDPKDICCLVFVERRYTCKCIYGLLLNYIQSTPELRNVLTPQFMVGRNNISPDFESVLERKWQKSAIQQFRDGNANLMICSSVLEEGIDVQACNHVFILDPVKTFNMYVQSKGRARTTEAKFVLFTADKEREKTIQQIYQYRKAHNDIAEYLKDRVLEKTEPELYEIKGHFQDDIDPFTNENGAVLLPNNALAILHRYCQTIPTDAFGFVIPWFHVLQEDERDRIFGVSAKGKHVISINMPVNCMLRDTIYSDPMDNVKTAKISAAFKACKVLYSLGELNERFVPKTLKERVAAIADVHFEHWNKYGDSVTATVNKADKSKYRTYKTECPLEFYDALPRVGEICYAYEIFLEPQFESCEYTEHMYLNLQTPRNYAILLRNKLPRLAEMPLFSNQGKLHVRVANAPLEVIIQNSEQLELLHQFHGMVFRDILKIWHPFFVLDRRSKENSYLVVPLILGAGEQKCFDWELMTNFRRLPQSHGSNVQQREQQPAPRPEDFEGKIVTQWYANYDKRMLVTKVHRELTPLSYMEKNQQDKTYYEFTMSKYGNRIGDVVHKDKFMIEVRDLTEQLTFYVHNRGKFNAKSKAKMKVILIPELCFNFNFPGDLWLKLIFLPSILNRMYFLLHAEALRKRFNTYLNLHLLPFNGTDYMPRPLEIDYSLKRNVDPLGNVIPTEDIEEPKSLLEPMPTKSIEASVANLEITEFENPWQKYMEPVDLSRNLLSTYPVELDYYYHFSVGNVCEMNEMDFEDKEYWAKNQFHMPTGNIYGNRTPAKTNANVPALMPSRPTVRGKVKPLLILQKTVSKEHITPAEQGEFLAAITASSAADVFDMERLEILGDSFLKLSATLYLASKYSDWNEGTLTEVKSKLVSNRNLLFCLIDADIPKTLNTIQFTPRYTWLPPGISLPHNVLALWRENPEFAKMIGPHNLRDLALGDEESLVKGNCSDINYNRFVEGCRANGQSFYAGADFSSEVNFCVGLVTIPNKVIADTLEALLGVIVKNYGLQHAFKMLEYFKICRADIDKPLTQLLNLELGGKKMRANVNTTEIDGFLINHSYLEKNLGYTFKDRRYLLQALTHPSYPTNRITGSYQELEFIGDAILDFLISAYIFENNTKMNPGALTDLRSALVNNTTLACICVRHRLHFFILAENAKLSEIISKFVNFQESQGHRVTNYVRILLEEADVQPTPLDLDDELDMTELPHANKCISQEAEKGVPPKGEFNMSTNVDVPKALGDVLEALIAAVYLDCRDLQRTWEVIFNLFEPELQEFTRKVPINHIRQLVEHKHAKPVFSSPIVEGETVMVSCQFTCMEKTIKVYGFGSNKDQAKLSAAKHALQQLSKCDA
Protein: Monodehydroascorbate reductase 3 (AtMDAR3) (EC 1.6.5.4) (Q9SR59)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Catalyzes the conversion of monodehydroascorbate to ascorbate, oxidizing NADH in the process. Required for producing sufficient ascorbate to maintain the interaction between Piriformospora indica and Arabidopsis in a mutualistic state.
Subcellular location: Cytoplasm {ECO:0000305}.
Interaction partners:
- Glutathione S-transferase DHAR1, mitochondrial
- Glutathione S-transferase DHAR2
- L-galactono-1,4-lactone dehydrogenase, mitochondrial
- L-ascorbate peroxidase 3
- Glutathione S-transferase DHAR3, chloroplastic
- L-ascorbate peroxidase S, chloroplastic/mitochondrial
- L-ascorbate peroxidase 1, cytosolic
- L-ascorbate peroxidase T, chloroplastic
- Probable glutathione peroxidase 2
- Probable phospholipid hydroperoxide glutathione peroxidase 6, mitochondrial
Sequence:
MAEEKSYKYVIIGGGVAGGYAAREFSNQGLKPGELAIISKEPVPPFERPELTKVYIDLEVNPTLANIYVCAGTGEAKQYPNWYKEKGIDLIVGTEIVKADLASKTLVSDDGKIYKYQTLLIATGSTNIRLSEIGVQEADVKNIFYLREIEDSDELALAMELYVQRGKAVIIGGGFLGLEISSALRANNHEVTMVFPEPWLVHRFFTAEIASFYESYYANKGIKIIKGTVATGFSTNSDGEVTEVKLEDGRTLEANIVVAGVGARPATSLFKGQLEEEKGGIKTDGFFKTSVPDVYALGDVATFPMKMYGGTRRVEHADNARKSAAQAVKAIKAGEEGKTIPDYDYLPYFYSRFFKLSWEFYGENVGESVLFGDNDPKSPKPKFGTYWVKDGKVVGVFLEGGTQEEHKAIAKVARAQPSVESLDVLSEEGLSFATKFYSTSL
Protein: Ammonium transporter 1 member 1 (AtAMT1;1) (P54144)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: High affinity ammonium transporter probably involved in ammonium uptake from the soil, long-distance transport to the shoots and re-uptake of apoplastic ammonium that derives from photorespiration in shoots. Contributes with AMT1-3 to the overall ammonium uptake capacity in roots under nitrogen-deficiency conditions.
Subcellular location: Cell membrane {ECO:0000269|PubMed:15308754, ECO:0000269|PubMed:16917981, ECO:0000269|PubMed:17026539}; Multi-pass membrane protein {ECO:0000269|PubMed:15308754, ECO:0000269|PubMed:16917981, ECO:0000269|PubMed:17026539}.
Interaction partners:
- Nitrogen regulatory protein P-II homolog
- CBL-interacting serine/threonine-protein kinase 23
- Ammonium transporter 1 member 3
- Glutamine synthetase cytosolic isozyme 1-1
- Protein NRT1/ PTR FAMILY 6.3
- Glutamine synthetase cytosolic isozyme 1-3
- High-affinity nitrate transporter 2.1
- High affinity nitrate transporter 2.4
- Glutamine synthetase, chloroplastic/mitochondrial
- Glutamine synthetase cytosolic isozyme 1-4
Sequence:
MSCSATDLAVLLGPNATAAANYICGQLGDVNNKFIDTAFAIDNTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGYAFAFGSPSNGFIGKHYFGLKDIPTASADYSNFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASPFRTDGDLLFSTGAIDFAGSGVVHMVGGIAGLWGALIEGPRLGRFDNGGRAIALRGHSASLVVLGTFLLWFGWYGFNPGSFNKILVTYETGTYNGQWSAVGRTAVTTTLAGCTAALTTLFGKRLLSGHWNVTDVCNGLLGGFAAITGGCSVVEPWAAIICGFVAALVLLGCNKLAEKLKYDDPLEAAQLHGGCGAWGLIFTALFAQEKYLNQIYGNKPGRPHGLFMGGGGKLLGAQLIQIIVITGWVSATMGTLFFILKKMKLLRISSEDEMAGMDMTRHGGFAYMYFDDDESHKAIQLRRVEPRSPSPSGANTTPTPV
Protein: Phosphoenolpyruvate/phosphate translocator 1, chloroplastic (OsPPT1) (Q69VR7)
Organism: Oryza sativa subsp. japonica (Rice)
Function: Phosphoenolpyruvate/phosphate translocator that transports phosphoenolpyruvate (PEP) and dihydroxyacetone phosphate.
Subcellular location: Plastid, chloroplast membrane {ECO:0000305}; Multi-pass membrane protein {ECO:0000305}.
Interaction partners:
Sequence:
MQSAAAVGLLRPCGATTAAAPLQLRNPSPRGFGVGVGQPLLPPRGLRLSAVAPRAGISARRIGLVPASPEQEDERRRGARDVAVAATAAAAGEAGAEEGGGLAKTLQLGALFGLWYLFNIYFNIYNKQVLKVFPYPINITNVQFAVGTVIALFMWITGILKRPKISGAQLAAILPLAMVHTMGNLFTNMSLGKVAVSFTHTIKAMEPFFSVLLSALFLGEMPTPFVVLSLVPIVGGVALASLTEASFNWAGFWSAMASNVTFQSRNVLSKKLMVKKEESLDNITLFSIITVMSFFLLAPVTLLTEGVKVTPTVLQSAGLNLKQIYTRSLIAAFCFHAYQQVSYMILARVSPVTHSVGNCVKRVVVIVTSVLFFRTPVSPINSLGTGVALAGVFLYSQLKRLKPKPKTA
Protein: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 2 (Mimitin) (Myc-induced mitochondrial protein) (MMTN) (NDUFA12-like protein) (Q59J78)
Organism: Mus musculus (Mouse)
Function: Acts as a molecular chaperone for mitochondrial complex I assembly. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.
Subcellular location: Mitochondrion {ECO:0000250|UniProtKB:Q8N183}.
Interaction partners:
- NADH dehydrogenase flavoprotein 2, mitochondrial
- NADH dehydrogenase iron-sulfur protein 8, mitochondrial
- NADH dehydrogenase flavoprotein 1, mitochondrial
- NADH dehydrogenase iron-sulfur protein 4, mitochondrial
- NADH dehydrogenase iron-sulfur protein 2, mitochondrial
- NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial
- NADH dehydrogenase 1 alpha subcomplex subunit 12
- NADH dehydrogenase 1 beta subcomplex subunit 9
- NADH dehydrogenase 1 alpha subcomplex subunit 5
- NADH dehydrogenase 1 alpha subcomplex assembly factor 4
Sequence:
MSWWSGVWRSVWSALSREVREHVGTDHLGNKYYYVAEYKNWRGQTIREKRIVEAANRKEVDYEAGDIPTEWEAWIRRTRKTPPTMEEILKNEKYREEIKIKSQDFYEKDKLGKETSEELLPSPTATQVKGHASAPYFGREEPSVAPTSTGKTFQPGSWTPEDGKRQSQ