wanglab/gogpt-training-data huggingface dataset:
Protein: CRAL-TRIO domain-containing protein C589.09, mitochondrial (Q9HDZ5)
Organism: Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Subcellular location: Mitochondrion {ECO:0000269|PubMed:16823372}.
Interaction partners:
Sequence:
MFSRLWVRCRCSTALSAAAAGTFFFRRSQKQPEPETVDEKVSFESYSPLKLMIQKTWPRFQEHKEYRESFIRLAKCDSPDAILVRFLASCNNDSHEASQKLINTLQWRVDTGVERIVERGELYAKETNDDQFLEQLRTGKVTMLGRDLSDRPICYIQVHLHQPSKLTQNSLREMTVWVMETMRLFLRPQKTLKDSMDSPQNVNVLFDLSNFSLHNMDYSFVKYLASCLEYYYPQSLGVCILHKSPWIFRSVWNIIKGWIKPEIAAKIVFTQSANDLEKYIDYSVIPTSLGGGNKKIFQYIEPVEHENDAVIEDSAEKTAALARYYAYFSEWEQHSLNWAKLDDDDAQNEKVRLCCDAAGTNFANCYWNVDKYIRARTVYDRLKWIGNV
Protein: Equatorin (Acrosome formation-associated factor) (MN9 antigen) (Q9D9V2)
Organism: Mus musculus (Mouse)
Function: Acrosomal membrane-anchored protein involved in the process of fertilization and in acrosome biogenesis.
Subcellular location: [Isoform 1]: Cytoplasmic vesicle, secretory vesicle, acrosome membrane; Single-pass type I membrane protein. Cytoplasmic vesicle, secretory vesicle, acrosome inner membrane; Single-pass type I membrane protein. Cytoplasmic vesicle, secretory vesicle, acrosome outer membrane; Single-pass type I membrane protein. Note=In the anterior acrosome region, enriched on the inner acrosomal membrane but minimal on the outer acrosomal membrane; in contrast in the posterior acrosome region enriched on both the inner and outer acrosomal membranes.; SUBCELLULAR LOCATION: [Isoform 2]: Nucleus. Cytoplasm.
Interaction partners:
Sequence:
MDFILLIILSGVFLPDIISLQPIVGQEPGVTLSDEEQYYADEENNTDGNSVALHKLEENEMDTPANEKTGNYYKDIKQYVFTTPNIKGSEVSVTATTNLEFAVKKNYKASKPTASGEEEKPSESSRKTSTPNIPAFWTILSKAVNETAVSMDDKDQFFQPIPASDLNATNEDKLSELEEIKLKLMLGISLMTLVLLIPLLIFCFATLYKLRHLRDKSYESQYSINPELATLSYFHPTEGVSDTSFSKSADSNSYWVHNSSEMRRSRTRRSKSKPMDFSAGSNQTVLTDESSFLPPEETRFLLPEEPGKELIVERGPMQAMNEIDAQLLLNKEGSPSN
Protein: Lysosomal-associated transmembrane protein 4A (Golgi 4-transmembrane-spanning transporter MTP) (Q15012)
Organism: Homo sapiens (Human)
Function: May function in the transport of nucleosides and/or nucleoside derivatives between the cytosol and the lumen of an intracellular membrane-bound compartment.
Subcellular location: Endomembrane system {ECO:0000305}; Multi-pass membrane protein {ECO:0000305}. Note=May reside in an intracellular membrane-bound compartment. {ECO:0000305}.
Interaction partners:
- Lysosomal-associated transmembrane protein 4B
- Lysosomal-associated transmembrane protein 5
- E3 ubiquitin-protein ligase NEDD4
Sequence:
MVSMSFKRNRSDRFYSTRCCGCCHVRTGTIILGTWYMVVNLLMAILLTVEVTHPNSMPAVNIQYEVIGNYYSSERMADNACVLFAVSVLMFIISSMLVYGAISYQVGWLIPFFCYRLFDFVLSCLVAISSLTYLPRIKEYLDQLPDFPYKDDLLALDSSCLLFIVLVFFALFIIFKAYLINCVWNCYKYINNRNVPEIAVYPAFEAPPQYVLPTYEMAVKMPEKEPPPPYLPA
Protein: Auxin-responsive protein IAA29 (Indoleacetic acid-induced protein 29) (Q93WC4)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations. Repression is thought to result from the interaction with auxin response factors (ARFs), proteins that bind to the auxin-responsive promoter element (AuxRE). Formation of heterodimers with ARF proteins may alter their ability to modulate early auxin response genes expression.
Subcellular location: Nucleus {ECO:0000250}.
Interaction partners:
- Probable WRKY transcription factor 57
- Auxin response factor 7
- Transcription factor PIF4
- Auxin response factor 5
- Probable indole-3-pyruvate monooxygenase YUCCA8
- Auxin response factor 9
- Protein TRANSPORT INHIBITOR RESPONSE 1
- Molybdopterin synthase catalytic subunit
- Auxin response factor 6
- Auxin response factor 8
Sequence:
MELDLGLSLSPHKSSKLGFNFDLNKHCAIEGAASCLGTEKLRFEATFGLGNVEENCYMPKQRLFALNGQPNEEDEDPLESESSIVYDDEEENSEVVGWPPVKTCMIKYGSYHHRHIRNHHHCPYHHRGRRITAMNNNISNPTTATVGSSSSSSISSRSSMYVKVKMDGVAIARKVDIKLFNSYESLTNSLITMFTEYEDCDREDTNYTFTFQGKEGDWLLRGDVTWKIFAESVHRISIIRDRPCAYTRCLF
Protein: Chymotrypsin-like elastase family member 3B (EC 3.4.21.70) (Elastase IIIB) (Elastase-3B) (Protease E) (Q9CQ52)
Organism: Mus musculus (Mouse)
Function: Efficient protease with alanine specificity but only little elastolytic activity.
Interaction partners:
- Carboxypeptidase A1
- Chymotrypsin-like elastase family member 2A
- Bile salt-activated lipase
- Carboxypeptidase B
- Chymopasin
- Chymotrypsinogen B
- Anionic trypsin-2
- trypsin
- Pancreatic triacylglycerol lipase
- Carboxypeptidase A2
Sequence:
MLRLLSSLLLVALASGCGQPSHNPSSRVVNGEEAVPHSWPWQVSLQYEKDGSFHHTCGGSLITPDWVLTAGHCISTSRTYQVVLGEHERGVEEGQEQVIPINAGDLFVHPKWNSMCVSCGNDIALVKLSRSAQLGDAVQLACLPPAGEILPNGAPCYISGWGRLSTNGPLPDKLQQALLPVVDYEHCSRWNWWGLSVKTTMVCAGGDIQSGCNGDSGGPLNCPADNGTWQVHGVTSFVSSLGCNTLRKPTVFTRVSAFIDWIEETIANN
Protein: Tyrosine-protein kinase Shark (EC 2.7.10.2) (Q24145)
Organism: Drosophila melanogaster (Fruit fly)
Function: Following axon injury, required for recruitment of drpr and glial cells to severed axons and for glial clearance of severed axons from the central nervous system. Together with Src42a and drpr, promotes the migration of macrophages to sites of wounding as part of a signaling cascade where Scr42a detects production of hydrogen peroxide at wound sites which triggers phosphorylation of drpr and subsequent recruitment and activation of shark. May be involved in signal transduction on the apical surface of ectodermal epithelial cells, regulating their polarity during invagination. Crumbs (crb) may be the intracellular signal.
Subcellular location: Cytoplasm {ECO:0000269|PubMed:7892198}. Note=Apical expression in cephalic furrow and tracheal cells. Limited to luminal surface and absent from the basal surface.
Interaction partners:
- Downstream of kinase
- Protein draper
- PTB domain-containing adapter protein ced-6
Sequence:
MSRDSDPMKWYHGNLSREAADELLKQGYEDGTFLVRESSTAAGDFVLSLLCQGEVCHYQVRRHGGEDAFFSIDDKVQTKILHGLDTLVDYYQQAANGLPTKLTVPLIRDLPPHNTRSHGVTNLLHRATSKNESKVVFELLKCGYRNFDAKNQDGQTALHLAALHSDEDILKHLLNAKVQVNSSDSFGCQPLHYAARSKPASFIRTLISAQANVQGRNIDNGYVPLHEAAKHGNLEAVQELLLAEAPPLPRTSSGEFPFDLAKEAGQTAVEEFLLNYKLPPANTTRDQWYHGTLTREEAVAILKKHAKELLAKQPEVDTSGCFLVRYSESPAASGLVLTLLCDQVVKNFRISQADLYQNGNKVQSGGSKFLYIDDGPYWPSVEHLIAHFMRFSYGLPVSLKYPVPPQPKPEVPSFATIPRSNMKPKAASPATPPTPVSPHSHHQHPHVPALTITKKKQKENSSSMFNTLRLTSPKKALFDMNSLRKNKSKGKRSDSESSVSGSLAGTEQELQAAAPMLKSLSFSTEFSTFNADGVTGSGAAAAGEVYNVPRNNTPIEIDLPPIAQKTEAEVEYFTKSDVAIERERAGQWIGNGYQPTMDVLSLLDQQIKAPAVARLNSLGPNASTESEMASYLHRKCSGTPSTPSATEVEAAKLRFFIEPEKLVLDREIGHGEFGSVHSGWLLRKSGAGEESRLEVAIKMLSDEHSNKQEFLREASVMMRLEHKCIVRLIGIAKGEMLMMVQELAPLGSMLQYILDHGHEITANAELKVWASQIACGMHYLESQHFVHRDLAARNILLTARHQAKISDFGMSRSLRPGSTEYQFTQGGRWPIRWYAPESFNLGIFSHASDVWSFGVTIWEMFSLGAPPYGEISNVDAIKLVDSGERLPQPNLCPAYIYAVMQSCWKERPKDRPTFVYLTEFFARDPDYQNLPELVQTVHI
Protein: Dioicin-2 (EC 3.2.2.22) (Ribosome-inactivating protein) (rRNA N-glycosidase) (P85208)
Organism: Phytolacca dioica (Bella sombra tree) (Phytolacca arborea)
Function: Nicks pBR322 dsDNA. Has adenine polynucleotide glycosidase activity on herring sperm ssDNA.
Subcellular location: Secreted, extracellular space {ECO:0000269|PubMed:18704492}. Golgi apparatus {ECO:0000269|PubMed:18704492}. Vacuole {ECO:0000269|PubMed:18704492}.
Interaction partners:
Sequence:
NIVFDVENATPETYSSFLTSLREAVKDKKSTCHGMIMATTTTELPKYVLVDLKLGSEKDAKTFTLAIRRGNLYLEGYSDIYNEKCRYRIFEDSESDAQQTVCPGDLTLPGSQNKIPYKKSYQSMESKGGDRTKLGLGQITLESRMNKIYGKDATDQKQFQKNEAEFLLIAVQMITEASRFKYIENKVKDSFDDAIGYKPDPKAISLETSWDKISNAIAKVNTPGNSIVTLPKGLLDENKKPWTTATMDELKNDIMGLLTHVTCKIK
Protein: GGDEF family protein (Q9KKY5)
Organism: Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
Interaction partners:
- cyclic-guanylate-specific phosphodiesterase
- PAS/EAL family protein
- GGDEF family protein
- Response regulator
- histidine kinase
- histidine kinase
- Aerobic respiration control sensor protein
- EAL domain-containing protein
- Cyclic di-GMP phosphodiesterase CdpA
- EAL domain-containing protein
Sequence:
MDRIWMDSFAGNQLKEMTEMRFARKQHIVLISSGVATAIFLGFALYYYFNHQPLSSGLLLLSGIVTLLNMISLNRHRELHTQADLILSLILLTYALALVSNAQHELSHLLWLYPLITTLVMINPFRLGLVYSAAICLAMTASILFNPAQTGSYPIAQTYFLVSLFTLTIICNTASFFFSKAINYIHTLYQEGIEELAYLDPLTGLANRWSFETWATEKLKEQQSSNTITALVFLDIDNFKRINDSYGHDVGDQVLKHFAHRLRNNIRNKDRATNQHDYSIARFAGDEFVLLLYGVRNLRDLDNILNRICNLFVDRYPETDMLNNLTVSIGAAIYPKDAITLPELTRCADKAMYAAKHGGKNQYRYYHDAAFPPAVETVLGSQPVEAPNVTPLKKAH
Protein: Putative RRM-containing protein (RNA binding (RRM/RBD/RNP motifs) family protein) (Q8L9M9)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Interaction partners:
- Ternary complex factor MIP1 leucine-zipper protein
- Protein OXIDATIVE STRESS 3 LIKE 3
- ADP-ribosylation factor-like protein 8c
- AAA-ATPase At5g17760
- Protein OXIDATIVE STRESS 3 LIKE 4
- Nuclear polyadenylated RNA-binding protein
- Protein RALF-like 31
- LIMR family protein At5g01460
- CASP-like protein 5A2
- Choline transporter-like protein
Sequence:
MQTTRSVQVNNVSDLATEREIHEFFSFSGDIEHIEIQKEFGQSRIAFVTFTDPKALEIALLLSGATIVDQIVTITRAENYVQRRETQEVRMLDNAMPLGLQESTTQTKTNMDGNSRAYVSKAQDVVATVLAKGSALGQDAVNKAKAFDEKHQLRANASAKVSSFDKRVGLTEKLSVGISAVNEKVKSVDQKLQVSDKTMAAIFAAERKLNDTGSAVKSSRYVTAGAAWFSGAFSKVARVGQVAGSKTKEKFNLAVSNMSSKDTPIAV
Protein: Uncharacterized protein, isoform A (Uncharacterized protein, isoform B) (A1ZBU8)
Organism: Drosophila melanogaster (Fruit fly)
Interaction partners:
- RH02620p
- Daisho1
- Uncharacterized protein, isoform A
- Bomanin bicipital 2, isoform A
- Bomanin bicipital 3, isoform A
- Uncharacterized protein
- Uncharacterized protein
- Bomanin Tailed 2
- Bomanin tailed 3, isoform A
Sequence:
MGSNTGAWILLGLLAGIASLSSAANIQRNEDQTILQNNGNTFLSNGAGQIIRGPDGKTVLIGSDGRRIITDADSSEEDSSHDYGHGGSYNNVIINGGSGSSVIHGDGHSFIVGDASHGSYMNSNGRSIRIINGAIELNDHGQVYTFRPKAAGINEKETVTINGQPAQVEYSNGDIVIELADHTVIAKIGGRTFLGDRESFDNRDKLEAEAKNYADRIQQEVHANLQKTMADIQRDLQNSLGNIFY
Protein: Present in the outer mitochondrial membrane proteome 10 (Q382L8)
Organism: Trypanosoma brucei brucei (strain 927/4 GUTat10.1)
Interaction partners:
Sequence:
MPSKRKTIAVVAGAAAAVGAAAYFIRRRRLLSEAEDDDAFTAPILSGAHEKSKVEVGMTKSPVCNDLSVENQLLAEALREIGAESPRTGPATSTASAAGTSSKGTMGDRKEFPQLGLSLTVPSPWKVREDLSPFPNVAMLTVWNEELVTEEVAQQPGSVPMIVLSVEDVRADNVNLDEFKDRCKELAVSQMMMMSGGAIEPKVSKNTSTKVGPFRHMLEYSQSLPPFCDIVVLNLIEVRGSVAYTFQIMGSPDVMQRYRSMFMDIANNVRIESNISTALGYVELLTGSVKVDIDTTWVYEYPGGDGALAVMTTTSPTKKEEIGLYHQGGVPVTPHKLRSEKVMDGVEVQIALDGKQEKKTFTYNGYSLVVKPLQKSNSYLDEQMLVSIVKSVSPSTAEPKPKKGGTFVNKEHGYRVNVVGGSRLVASRIGGGSVAYAPQGLDGAEGGDHPPTVTMRVGTPENDPECMGSVEEWEARMRQEAEEGGIRDIARTTVNGEPCLTFISQSMEEIMPGQRMEIRGKVFIFVREGRTTLIRWEMAVGLWKKFERDMNAFVESLEFI
Protein: Phosphoinositide 3-kinase adapter protein 1 (B-cell adapter for phosphoinositide 3-kinase) (B-cell phosphoinositide 3-kinase adapter protein 1) (Q9DDT2)
Organism: Gallus gallus (Chicken)
Function: Signaling adapter that contributes to B-cell development by linking B-cell receptor (BCR) signaling to the phosphoinositide 3-kinase (PI3K)-Akt signaling pathway. Has a complementary role to the BCR coreceptor CD19, coupling BCR and PI3K activation by providing a docking site for the PI3K subunit PIK3R1. Alternatively, links Toll-like receptor (TLR) signaling to PI3K activation, a process preventing excessive inflammatory cytokine production. Also involved in the activation of PI3K in natural killer cells. May be involved in the survival of mature B-cells via activation of REL.
Subcellular location: Cytoplasm {ECO:0000269|PubMed:11163197}. Cell membrane {ECO:0000305|PubMed:11163197}; Peripheral membrane protein {ECO:0000305|PubMed:11163197}.
Interaction partners:
Sequence:
MTASGTHGGYDVLILYASDAAEWCQYLQNLFLSTRHIRKHHIQSYQLEGESAISDQELDLFNRSRSIIILLSAELVQNFYCPPVLQSLQEALWPPHKVVKLFCGVTDCDDYLTFFKDWYQWQELTYDDEPDAYLEAVKKAISEDSGCDSVTDTETEDEKTSVYSCQLAMNEEHESSKSTGEHLVVQPDHIRCGVQTTVYIIMKCRLDDKVKTEVEFSPENSSSVRVLAELENEYTISVEAPNLTSGTVPLQIYSGDLMVGETSVTYHTDMEEISSLLANAANPVQFMCQAFKIVPYSIEALDKLLTESLKKNIPASGLHLFGINQLEEDDMTTNQRDEELPTLLHFSARYGLKNLTALLLTCPGALQAYSVANKYGHYPNTIAEKHGFKDLRQFIDEYVETADMLKSHIKEELMQGEEDESVYESMAHLSTDLLMKCSLNPGSDEELYESMAGFVPGAPEDLYVEMLQSKPDTPISGDEISLTVKDSMLRKFLEGGSTDAPDSGEGVSQQYGEDLYYSVEKDTFPQEMASRPPVPVPRPESSSPQPDNELYISKVFAQKAQRPENLYVPRGKVRKETIVRPVRDLSQSSIYDPFAGMKTPGQRQLITLQEQVKMGILNVDEAVLHFKEWQLNQKKRSESFRFQQENLKRLRDSITRRQMEKQKSGKSADLEITVPIRRSHNTLGKPECGIYEYAPRKNIFPPKKELKRGDWKTESTSSTTSSASNRSSTRSILSVSSGMEGDSEDNEVSEASRSRSPIPSQAERLPLPLPERPPRVPPRGASRPVNCEGFYPPPVPPRGR
Protein: Type II methyltransferase M2.BsuMI (M2.BsuMI) (EC 2.1.1.37) (BsuMI modification methylase subunit YdiP) (Cytosine-specific methyltransferase M2.BsuMI) (O34680)
Organism: Bacillus subtilis (strain 168)
Function: A methylase, recognizes the double-stranded sequence 5'-YTCGAR-3', methylates C-3 on both strands, and protects the DNA from cleavage by the BsuMI endonuclease.
Interaction partners:
- Type II methyltransferase M1.BsuMI
- Putative type II methyltransferase M.BsuMIIP
- Type II restriction enzyme BsuMI component YdjA
- S-adenosylmethionine synthase
- Type II restriction enzyme BsuMI component YdiR
- 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase
- Uncharacterized methyltransferase YrrT
- S-adenosylmethionine decarboxylase proenzyme
- Type II restriction enzyme BsuMI component YdiS
Sequence:
MKVVSLFSGIGGIELGLHQSGHTTEIFCEVDPLAKAVLSKNFPGVKIEDDINEIRELPSCDLVAAGFPCQDLSQAGGKEGIDGSRSGLVKKLFELIEKKEHANRPPWILIENVPYMLRLNRGKAMSYLTSVLSELGYTWAYRTVDARCFGLPQRRHRVILLASLFEDPKDVIFSQDHSEPDLDGKPSVVDHSNYYGFYWTEGLRGVGWAREAVPPIKCGSSVGIASPPAVWSPYEDIVGTINIRDAERLQGFPEDWTNITTETGKDIKEGARWRLVGNAVSVRVSKWIGENLSQPKGSISDFEGELVTKTWPSAAWGYGDKKYKVPVSKWVANTEQIAISEFLNHPLKPLSARALNGFLGRAARCTNVNYSDEFINSLERCKDRQLQKV
Protein: Kinectin (Q61595)
Organism: Mus musculus (Mouse)
Function: Receptor for kinesin thus involved in kinesin-driven vesicle motility. Accumulates in integrin-based adhesion complexes (IAC) upon integrin aggregation by fibronectin (By similarity).
Subcellular location: Endoplasmic reticulum membrane {ECO:0000269|PubMed:15316074}; Single-pass type II membrane protein {ECO:0000269|PubMed:15316074}. Note=Vesicle membrane protein anchored to the endoplasmic reticulum (By similarity). Some isoforms containing the inserts at residues 1007-1035 and 1154-1177 are detected in neurite processes. {ECO:0000250}.
Interaction partners:
- Kinesin light chain 1
- Rho-related GTP-binding protein RhoG
- Transforming protein RhoA
- Kinesin-1 heavy chain
Sequence:
MELYESTYFIVLIPSVVITVIFLFFWLFMKETLYDEVLAKQKREQKLISTKTDKKKAEKKKNKKKEIQNGTLRESDSEHVPRDFKLSDASPAEDEQFVPAPLNVAETSSSVRERQKKEKKQKPSLEEQVIKESDASKIPGKKVEPVLVTKQPAPPPPLEAAALKKKAGQKKSKNGSEEQDKKVEMLMAPSKEQDVLLSHQDTKQEGGLGKKKGLSKKQKSENVAVLVDEPLIHATTYMPLDNANSNLMMDKREIIDMIKPDHVEGIQKSGTKKLKIETDKENAEVKFKDFLLSLKTMMFSEDEALCVVDLLKEKSGVIKEALKKSNKGELSGLLHQLQEKERLLSAMKEDAAASKERCKRLTQEMMTEKERSSVVIARMKDRIGTLEKEHNIFQNKMHASYQETQQMQMKFQQVQEQMEAEIAHLKQENGILRDAVSNTTNQLESKQSAELNKLRQDCGRLVSELNEKTGKLQQEGVQKKNAEQAATQLKVQLQEAERRWEEVQSYIRKRTAEHEAAQQDLQSKFVAKENEVQSLHSKLTDTLVSKQQLEQRLMQLMESEQKRASKEESLQIQVQDILEQNEALKAQIQQFHSQIAAQTSASVLAEELHKVIAEKDKQLKQTEDSLANEQDHLASKEEELKDVQNMNFLLKAEVQKWQALANEQAATAHEVEKMQKSIHVKEDEIRLLEEQLQHEVASKMEELKILSEQNKALQSEVRKLQTAVSQQPNKDVVEQMEKCIQEKDEKLRTVEELLETGLIQVATREEELSAIRTENSTLTREVQELKAKQSDQVSFVSLIEDLKRVIHEKDGQIKSVEELLEVELLKVANKEKTVQALKQEIEVLKEEIGNAQLEKAHQLSVTSQVQELQNLLRGKEEQVNSMKAALEDRDRGLTGRGTCAQVCSTPQFEELESVLKEKDNEIKRIEVKLKDTESDVSKMSELLKEVQEENKFLKCQLSHQKHQQASFPSQEELQTVISEKEKEITDLCNELESLKNAVEHQRKKNNDLREKNWEAMEALASTEKMLQDRVNKTSKERRQHVEAIELESKDLLKRLFPTVSVPSNLNYSEWLRGFEKKAKACVAGTSDAEAVKVLEHRLKEASEMHTLLQLECEKYKSVLAETEGILQKLQRSVEQEESKWKIKADESQRMIKQMQSSFTASERELERLRQENKDMENLRREREHLEMELEKAEMERSTYVMEVRELKDLLTELQKKLDDSYSEAVRQNEELNLLKTQLNETHSKLQNEQTERKKVADDLHKAQQSLNSIHSKISLKAAGDTVVIENSDISPEMESPEKETMSVSLNQTVTQLQQLLQEVNQQLTKET
Protein: Integral membrane protein (A0A0H2UR23)
Organism: Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)
Interaction partners:
Sequence:
MNLWDIFFTTQATEPPKFDLFWYVSLFTLLALTFYTAHRYREKKVYQRFFQILQTVQLILLYGWYWVNHMPLSESLPFYHCRMAMFVVLLLPGQSKYKQYFALLGTFGTLAAFVYPVPDAYPFPHITILSFIFGHLALLGNSLVYLLRQYNARLLDVKGIFLMTFALNALIFVVNLVTGGDYGFLTKPPLVGDHGLVANYLLVSIVLVATISLTKKILEFFLAQEAEKMIAKEA
Protein: Alpha II-spectrin (Spectrin alpha chain, non-erythrocytic 1) (A3FG33)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Subcellular location: Cytoplasm, cytoskeleton {ECO:0000256|ARBA:ARBA00004245}.
Interaction partners:
Sequence:
MDISGVKVLETADDIQERRQQVLDRYRRFKELSVVRRQKLEDSYRFQFFRRDADELEKWIQEKLQIASDENYKDPSNLQGKLQKHQAFEAEVQANAEAIIKLDETGNLMISEGHFASETIRTRLEELHRLWDLLLQKTKEKGIRLLQAQKLVQYLRECEDALDWISDKEAIVTSEELGQDLEHVEVLRKKFEEFQTDLAAHEERVNEVNQAAGKLTQENHPEAELILKKQEEVNSAWQRLKGLAQQRQGKLFGAAEVQRFNRDVDETISWIKEKEQLMASDDFGRDLASVQALLRKHEGLERDLAALNDKVNTLGGEADRLQQTHPQNATQIHLKRDELITNWEQIQTLATERHARLNDSYMLQRFTADFRDLTSWVTEMKALINADELANDVAGAEALLDRHQEHKGEIDAHEDSFKSTDEAGQALLNTGHYASEEVKEKLGILSEEKVSLLELWELRRQQYEQCMDLQLFYRDTEQVDNWMSKQEAFLLNEDLGDSLDSVEALLKKHEDFEKSLSAQEEKITALDEFATKLIQNNHYAKDDVATRRDALLSRRNALHERAQFRRAALEDSFHLQQFFRDSDELKSWINEKMKTATDEAYKDPSNLQGKVQKHQAFEAELSANQSRIDALQKSGQELVDGKHYASSEVSTRMDEVSSQWKKLLEATELKGIKLREANQQQQFNRNVEDIELWLYEVEGHLASDDFGKDLTSVQNLQKKHALLEADVAAHQDRIDGITIQARQFQDAGHFDADNIRKKQEALVARYEALKEPMAARKQKLSDSLRLQQLFRDVEDEETWIREKEPIASSTNRGKDLIGVQNLLKKHQALQAEISGHEPRIKAVTQKGEAMIDEGHFAGEDVKAKLQELHNRWDGLKGKAAQRRQDLEDSLQAQQYFADANEAESWMREKEPIVGSPDYGKDEDSAEALLKKHEALMSDLSAYGSSIQALKEEAQACRQQVAPTDDETGKELVLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAYVKKLDPTQSSSRENLLDEQGSIGLRQDQIENQTAATKEVCSVSMRMKQVEELYGTLLELGEKRKDMLEKSCKKFMLFREANELQQWINEKESALTNEEVGSDLEQVEVLQKKFDDFQKDLKANESRLRDINKVASELESEGLMAEEAPVVQAQQVEVLGSAPGKDEADSKGASPWKSVRLAVQTTANFNTIKELNNRWRSLQQLAEDRSNMLGSAHEVQRFHRDADETKEWIEEKNQALNTDNYGHDLASVQALQRKHEGFERDLAALGDKVNSLGETAERLIQSHPEAVDDIQEKCTELNTAWSSLVGRADQRKEKLGNSHDLQRFLSDFRDLMSWINGIRGLVSSDELAKDVTGAEALLERHQEHRTEIDARAGTFLAFEQFGQQLLARGHYASPEIKQKLEALDRERADLEKAWVQRRMMLDQCLELQLFNRDCEQAENWMAAREAFLASDDKGDSLDSVEALIKKHEDFDKAINVQEEKIAALQSFADQLISADHYAKPEIFKRRSEVLDRWLRLKAQMIEKRSKLGESQTLQQFSRDVDEIEAWISEKLQTATDESYKDPTNIQLSKLLSKHQKHQAFEAELHANADRIRGVIDTGNALIQRGACAGSEDAVKARLNALDEQWQFLVNKSAEKSQKLKEANKQQNFNTGIKDFDFWLSEVEALLASEDYGKDLASVNNLLKKHQLLEADISAHEDRLKDLNGQADSLMASNAFDTSQVKDKRDAVNGRFGKIKSMAAGRRAKLNESHRLHQFFRDLDDEESWIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELGAHEPAIQSVLETGKKLSDDNTIGQEEIQQRLAQFVEHWRELKDLAAARGQRLEESLEYQQFVANVEEEEAWINEKLNLVGSEDYGDTLAAVQGLLKKHEAFETDFTVHRDRVNDVCSNGDELVKKENHNVENIMAKMKALRGKVLELERAAAQRKAKLDENSAFLQFNWKADVVESWIGEKENSLKTDDYGRDLSSVQTLLTKQETFDAGLQAFQQEGITNITALKDQLLAAKHVQSKAIEARHATLMKRWNQLLSNSAARKKKLLEAQDHFRKVEDLFLTFAKKASAFNSWFENAEEDLTDPVRCNSLEEIRALRDAHDAFRSSLSSAEADFSQLAELDRQIKSYNVVSNPYTWFTMEALEETWSNLQKIIKERELELQKEQRRQEENDKLRQEFAQHANAFHQWLQETRTYLLDGSCMVEESGTLESQLEATKRKHQEIRAMRSQLKKIEDLGAAMEEALILDNKYTEHSTVGLAQQWDQLDQLGMRMQHNLEQQIQARNTTGVTEEALKEFSMMFKHFDKEKSGRLNHQEFKSCLRSLGYDLPMVEEGEPDPEFESILDIVDPNRDGNVSLQEYMAFMISRETENVKSSEEIESAFRALSAENKPYVTKEELYQNLTKEQADYCISHMKPYLDSKGREIPSAFDFVEFTRSLFVN
Protein: Amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family (Q72DG2)
Organism: Nitratidesulfovibrio vulgaris (strain ATCC 29579 / DSM 644 / CCUG 34227 / NCIMB 8303 / VKM B-1760 / Hildenborough) (Desulfovibrio vulgaris)
Subcellular location: Cell membrane {ECO:0000256|ARBA:ARBA00004651, ECO:0000256|RuleBase:RU363032}; Multi-pass membrane protein {ECO:0000256|ARBA:ARBA00004651, ECO:0000256|RuleBase:RU363032}.
Interaction partners:
- Amino acid ABC transporter, ATP-binding protein
- Amino acid ABC transporter, periplasmic amino acid-binding protein
- Glutamine ABC transporter, periplasmic glutamine-binding protein
- Amino acid ABC transporter, periplasmic amino acid-binding protein
- Amino acid ABC transporter, periplasmic amino acid-binding protein
- Amino acid ABC transporter, ATP-binding protein
- Glutamine ABC transporter, ATP-binding protein
- Amino acid ABC transporter, ATP-binding protein
- Amino acid ABC transporter, ATP-binding protein
- Amino acid ABC transporter, ATP-binding protein
Sequence:
MTQYRGLDKPRGQGYFLFWKAVFVGIMLCTVAFFWYASSSVEYIWRWNRVPQYFWVAEKTDVRAEVSGDVVSVETTAEGATRITVKGDDGSETYTVPPAGKVLISGGDYIYSGDPVGRYEVSKPGILLEGLWITLEVSMLAIIIGIVLGVVTGLARISVNPALRWLAITYIEIIRGSPLLVQVFLWYFVVGTLLNALFEKVGLSAIPPLWYGVMALAIFTGAYVAEIVRAGIQSVHRGQMEAARSLGMSYAQSMRKVILPQAFRRIMPPLAGQFISLVKDSSLLGVIAVRELTKATREVVTTSLQPFELWIVCALLYLVLTFTLSLCVQYLERRAVR
Protein: Tripartite terminase subunit 2 (P16792)
Organism: Human cytomegalovirus (strain AD169) (HHV-5) (Human herpesvirus 5)
Function: Component of the molecular motor that translocates viral genomic DNA in empty capsid during DNA packaging. Forms a tripartite terminase complex together with TRM1 and TRM3 in the host cytoplasm. Once the complex reaches the host nucleus, it interacts with the capsid portal vertex. This portal forms a ring in which genomic DNA is translocated into the capsid.
Subcellular location: Host nucleus {ECO:0000255|HAMAP-Rule:MF_04015}. Note=Found associated with the external surface of the viral capsid during assembly and DNA packaging, but seems absent in extracellular mature virions. {ECO:0000255|HAMAP-Rule:MF_04015}.
Interaction partners:
Sequence:
MSWAKQRVPFLDDDDGEEENDVQDDVDSPVPTRPLVIDEDAEPAAGTSGGLEGGGGDDEDGEDGHALPDLDDDLLLQFEPMLPRVYDLLLPSLDARLNFVNAGQKYAAFLKYVHGDCATCSHGEILREKTQLLTAIVSKLMDINGILEGKDESAPGK
Protein: NADH-quinone oxidoreductase subunit C (EC 7.1.1.-) (NADH dehydrogenase I subunit C) (NDH-1 subunit C) (P9WJH3)
Organism: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Function: NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.
Subcellular location: Cell membrane {ECO:0000255|HAMAP-Rule:MF_01357}; Peripheral membrane protein {ECO:0000255|HAMAP-Rule:MF_01357}; Cytoplasmic side {ECO:0000255|HAMAP-Rule:MF_01357}.
Interaction partners:
- NADH-quinone oxidoreductase subunit F
- NADH-quinone oxidoreductase subunit D
- NADH-quinone oxidoreductase subunit A
- Uncharacterized response regulatory protein Rv3143
- NADH-quinone oxidoreductase subunit L
- NADH-quinone oxidoreductase subunit M
- NADH-quinone oxidoreductase subunit E
- NADH-quinone oxidoreductase subunit B
- NADH-quinone oxidoreductase subunit I
- NADH-quinone oxidoreductase subunit H
Sequence:
MSPPNQDAQEGRPDSPTAEVVDVRRGMFGVSGTGDTSGYGRLVRQVVLPGSSPRPYGGYFDDIVDRLAEALRHERVEFEDAVEKVVVYRDELTLHVRRDLLPRVAQRLRDEPELRFELCLGVSGVHYPHETGRELHAVYPLQSITHNRRLRLEVSAPDSDPHIPSLFAIYPTNDWHERETYDFFGIIFDGHPALTRIEMPDDWQGHPQRKDYPLGGIPVEYKGAQIPPPDERRGYN
Protein: ER membrane protein complex subunit 2 (Q9CAU9)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Subcellular location: Endoplasmic reticulum membrane {ECO:0000256|RuleBase:RU367091}; Peripheral membrane protein {ECO:0000256|RuleBase:RU367091}; Cytoplasmic side {ECO:0000256|RuleBase:RU367091}.
Interaction partners:
- ER membrane protein complex subunit 3
- ER membrane protein complex subunit 4
- ER membrane protein complex subunit 1
- ER membrane protein complex subunit 6
- Membrane magnesium transporter
- ER membrane protein complex subunit 7 homolog
- ER membrane protein complex subunit 8/9 homolog
- Uncharacterized protein family
- ER membrane protein complex subunit-like protein
- ER membrane protein complex subunit 10
Sequence:
MVTKTEEIQLNQLENQVENGGGGVWEYLCLVRKLKVRRSEIVLKHGLSILNDSGKRSALGPDEWTLYEQVAIAAMDCQSLGVAQNCIKVLKKKFPESKRVGKLEALLLEAKGMWEEAEKAYTSLLEDNPLDQVIHKRKVAMAKAQGKSSLAIEHLNKYLEVFMADHDAWRELAEIYVSLQMYKQAAFCYEELILTQPTLPLYHLAYADVLYTIGGLENLIAARKYYAATIDLTGGKSTRALLGICLCGSAIAQISKGRNKEDKDMAAPELQSLAATALEREYKQKAPAKLNLLTSALRNLKIA
Protein: Conserved protein (O53961)
Organism: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Interaction partners:
- PPE family protein PPE35
- Conserved protein
- Probable membrane protein
- Conserved protein
Sequence:
MSGRKFSFEVTKTSSAPAATLFRLVTDGGNWATWAKPIVAQSSWARRGDPAPGGIGAIRKLGMWPVFVQEETVEYEQDRRHVYKLVGARTPVQDYFGEVVLTPNASGGTDLRWSGSFTEKVRGTGPVMRAALGGAVRFFAGQLVKAAEREAVRR