wanglab/gogpt-training-data huggingface dataset:
Protein: Acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12) (E9PEJ4)
Organism: Homo sapiens (Human)
Subcellular location: Mitochondrion matrix {ECO:0000256|ARBA:ARBA00004305}.
Interaction partners:
Sequence:
MWRVCARRAQNVAPWAGLEARWTALQEVPGTPRVTSRSGPAPARRNSVTTGYGGVRALCGWTPSSGATPRNRLLLQLLGSPGRRYYSLPPHQKVPLPSLSPTMQAGTIARWEKKEGDKINEGDLIAEVETDKATVGFESLEECYMAKILVAEGTRDVPIGAIICITVGKPEDIEAFKNYTLDSSAAPTPQAAPAPTPAATASPPTPSAQAPGSSYPPHMQVAAVPPTPQPLAPTPSAPCPATPAGPKGRVFVSPLAKKLAVEKGIDLTQVKGTGPDGRITKKDIDSFVPSKVAPAPAAVVPPTGPGMAPVPTGVFTDIPISNIRRVIAQRLMQSKQTIPHYYLSIDVNMGEVLLVRKELNKILEGRSKISVNDFIIKASALACLKVPEANSSWMDTVIRQNHVVDVSVAVSTPAGLITPIVFNAHIKGVETIANDVVSLATKAREGKLQPHEFQGGTFTISNLGMFGIKNFSAIINPPQACILAIGASEDKLVPADNEKGFDVASMMSVTLSCDHRVVDGAVGAQWLAEFRKYLEKPITMLL
Protein: Cell division protein FtsX (O34876)
Organism: Bacillus subtilis (strain 168)
Function: Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation. May act as an importer, possibly at the top of a hierarchical cascade leading to the correct temporal initiation of sporulation. Acts upstream of the histidine kinases KinA, KinB and KinC, the RapA phosphatase and the Spo0A sporulation protein.
Subcellular location: Cell membrane {ECO:0000269|PubMed:23651456, ECO:0000305|PubMed:18573177}; Multi-pass membrane protein {ECO:0000305|PubMed:18573177}. Membrane raft {ECO:0000269|PubMed:23651456}; Multi-pass membrane protein. Note=Unlike the E.coli ortholog, localization is not restricted to division septa, nor is it dependent on FtsZ. Present in detergent-resistant membrane (DRM) fractions that may be equivalent to eukaryotic membrane rafts; these rafts include proteins involved in signaling, molecule trafficking and protein secretion (PubMed:23651456). {ECO:0000269|PubMed:23651456}.
Interaction partners:
- Cell division ATP-binding protein FtsE
- Cell division protein FtsA
- Peptidoglycan DL-endopeptidase CwlO
- Cell division protein FtsZ
- Probable peptidoglycan glycosyltransferase FtsW
- Probable peptidoglycan endopeptidase LytE
- DNA translocase SpoIIIE
- Uncharacterized membrane protein YttA
- Septum site-determining protein DivIVA
- L-Ala--D-Glu endopeptidase
Sequence:
MIKILGRHLRESFKSLGRNTWMTFASISAVTVTLILVGVFLVIMLNLNNMATNAEKQVEIKVLIDLTADQKAQDKLQNDIKELKGIQSVTFSSKEKELDQLVDSFGDSGKSLTMKDQENPLNDAFVVKTTDPHDTPNVAKKIEKMDHVYKVTYGKEEVSRLFKVVGVSRNIGIALIIGLVFTAMFLISNTIKITIFARRKEIEIMKLVGATNWFIRWPFFLEGLLLGVFGSVIPIALVLSTYQYVIGWVVPKVQGSFVSLLPYNPFVFQVSLVLIAIGAVIGVWGSLTSIRKFLRV
Protein: Abca12 protein (B2RY11)
Organism: Mus musculus (Mouse)
Subcellular location: Membrane {ECO:0000256|ARBA:ARBA00004141}; Multi-pass membrane protein {ECO:0000256|ARBA:ARBA00004141}.
Interaction partners:
Sequence:
MASQFHQLRILVWKNWLGVKRQPLWTLVLILWPVIIFIILAITRTKFPPTAKPTCYLAPRNLPSAGFFPFLQTLLCDTDSKCKDTPYGPRDLLRRKGIDGPLFKESEILKKPSNPKRDSNLSLRSTQVPERSHTSLATVPPRPSYDLEGTGTENFNGSQLLTRILGLEKLLKQNSTPEDIRRELCESYPGYTADYAFSWVTLGKNVFNKFCLSNMTLLESSLQELKYQVSQMSSDPDNQKRVFRGLVQVLSFFSQVQQQREVWQLLSSLPDVFQNGTSLSSLFGVLQKANRVLLVVQKVYPRVQTDEGFSTLQKSVKHLLNTLDSPMQGDNSTHAWSDDDEQTLSPSSLAAQLLILENFEDAILNISSNSPYSPYLACVRNMTDNLAKGSPDNLKLLQSTIHFRKSFLQNGSSEDSFPPFLEILKSKLSQLRNLTELLCESETFSSIKKSCQFSNMSFERLCEDHAFHVQLIEAAELGTDLTTGLLYHDNIISAKLRGLLTGDPSKINLNVDWLLEQALQMNYLENITRLIPTVEAMLHVNTSADASEKPGQLREMFKNIDLLKEDLRAIGMSNTSIDKLLAIPIPDNRAEIISRVFWLHSCDTNVTNPKLEDAMKEFCKLPLPERSHQSYLIGLTLLHYLDIYNFTYKVFFPRKDQKPMERMMELFIKLREILNQLASGTHPLLDKMRSLRQMHLPRSVPLTQAMYRNTRMNSPAGSFSTISQALCSQGITTEYLTAMLPSSQKPKGNHTKDFLTYKLTKEEIASKYGIPLNATPFCFSLYKDIINMPAGPVIWAFLKPMLLGKILYSPYNPTTKAIMEKSNVTLRQLAELREKSQEWMDKSPIFMNSFHLLNQTIPMLQNTLRNPFVQVFVKFSVGLDAVELLKQIDDLDVLRLKLVNNIDIIDQLNTLSSLTVNISSCVLYDRIQASDTVEEMEAVAEQLYKSNELFGSVIFKLPSNGSSHRGFDPEKVSLPPIVRYTIRMSLKTAQTTRSIRTKIWAPGPHNSPSHNQIYGRAFIYLQDSIERAIIELQTGRNSQEVAVQVQAVPYPCFMKDNFLTSVSYSLPIVLMVAWVVFIAAFVKKLVYEKDLRLHEYMKMMGVNSCSHFFAWLIESIGFLLVTIAILIVILKFGNTLPKTNGFILFLYFSDYSFSVIAMSYLISVFFNNTNIAALIGSLIYVIAFFPFIVLVTVEDELSYVIKVFMSLLSPTAFSYASQYIARYEEQGVGLQWENMYKSPVQDDTTSFGWLCCLILADSFIYFFIAWYVRNVFPGTYGMAAPWYFPILPSYWKERFGCAEVKHEKSNGLMFTNIMMQNTNPSASKTSPDCAFPSNIEPEPKDLQVGVALHGVTKIYGSKTAVENLNLNFYEGHITSLLGPNGAGKTTTISMLTGLFGATAGTIFVYGKDIKTDLNTVRKNMGVCMQHDVLFSYLTTKEHLLLYGSIKVPHWTKTQLHEEVKRTLKDTGLYSHRHKRVGTLSGGMKRKLSISIALIGGSRVVILDEPSTGVDPCSRRSIWDVISKNKTARTIILSTHHLDEAEVLSDRIAFLEQGGLRCCGSPFYLKEAFGDGYHLTLTKKKSPNLDTNAICDTVAVTAMIQSHLPEAYLKEDIGGELVYVLPPFSTKVSGAYLSLLRALDKGMGKLNIGCYGISDTTVEEVFLNLTKDSQKSSNMSLEHLTQRKVGNPSANGTSTPDDLSVSSSNFTDRDDKVLTRSEKLEGFGLLLKKIMAILIKRFHHTRRNWKGLIAQVILPIVFVATAMGLGTLRDSSNSYPEIMISPSIYGTSEQTAFYANFDPSTSGLVSALWNFPGIDNVCLNTSDLQCLKKDDLGKWNTSGEAIDNFGVCSCSDNVQECPKFNYHPPHRRTYSSQVIYNLTGKHMENYLITTANHFVQKRYGGWSFGMKLTNDLRFDVTAVPDNRTLAKVWYDPEGYHSLPAYLNSLNNFLLRVNMSEYDAARHGIIMYSHPYPGVQDQEQATISSLIDILVALSILMGYSVTTASFVTYIVREHQTKAKQLQHISGIGVTCYWVTNFIYDMVFYLVPVAFSIGVIAIFKLPAFYSGNNLGAVSLLLLLFGYATFSWMYLLAGLFHETGMAFITYVCVNLFFGINSIVSLSVVYFLSKEKPNDPTLELISETLKRIFLIFPQFCFGYGLIELSQQQAVLDFLKAYGVEYPSETFEMDKLGAMFVALVSQGTMFFLLRLLINEWLIKKLRLFFRKFTSSPIMETVDEDEDVRAERLRVESGAAEFDLVQLHRLTKTYQLIHKNIIAVNNISLGIPAGECFGLLGVNGAGKTTIFKMLTGDIIPSSGNILIRNKSGSLGHVDSHSSLVGYCPQEDALDDLVTVEEHLYFYARVHGIPEKDIKDTVHKLLRRLHLMAYKDRSTSMCSYGTKRKLSTALALIGKPSILLLDEPSSGMDPKSKRHLWRIISEEVQNKCSVILTSHSMEECEALCTRLAIMVNGRFQCIGSLQHIKSRFGRGFTVKVHLKNNKVSMETLTKFMQLHFPKTYLKDQHLSMLEYHVPVTAGGVANIFDLLETNKTALNITNFLVSQTTLEEVFINFAKDQKSYENVDTSSQGSTISVDSQEDQLDS
Protein: Cytochrome c-550 (Cytochrome c A) (P24469)
Organism: Bacillus subtilis (strain 168)
Function: Not essential for growth on minimal or rich media.
Subcellular location: Cell membrane; Single-pass membrane protein.
Interaction partners:
- Cytochrome c oxidase subunit 2
- Menaquinol:cytochrome c reductase cytochrome c subunit
- Menaquinol:cytochrome c reductase iron-sulfur subunit
- Menaquinol:cytochrome c reductase cytochrome b subunit
- Protein CtaG
- Cytochrome c oxidase subunit 3
- Putative Rieske 2Fe-2S iron-sulfur protein YhfW
- Cytochrome c oxidase subunit 1
- Cytochrome c oxidase subunit 4B
- Uncharacterized protein YlaL
Sequence:
MKWNPLIPFLLIAVLGIGLTFFLSVKGLDDSREIASGGESKSAEKKDANASPEEIYKANCIACHGENYEGVSGPSLKGVGDKKDVAEIKTKIEKGGNGMPSGLVPADKLDDMAEWVSKIK
Protein: Nascent polypeptide-associated complex subunit alpha (NAC-alpha) (Alpha-NAC) (Inhibitor of cell death 2) (Q86S66)
Organism: Caenorhabditis elegans
Function: May prevent inappropriate targeting of non-secretory polypeptides to the endoplasmic reticulum (ER) (By similarity). Plays a role in the response to heat stress.
Subcellular location: Cytoplasm {ECO:0000250|UniProtKB:Q13765}.
Interaction partners:
- Transcription factor BTF3 homolog
- Large ribosomal subunit protein eL13
- Probable elongation factor 1-gamma
- Large ribosomal subunit protein uL22
- Large ribosomal subunit protein uL16
- Large ribosomal subunit protein uL4
- Large ribosomal subunit protein eL20
- Large ribosomal subunit protein uL18
- Large ribosomal subunit protein eL18
- Large ribosomal subunit protein eL19
Sequence:
MTGSTETRQKEVKEPQVDVSDDSDNEAVEQELTEEQRRVAEAAGLGDHIDKQAKQSRSEKKARKLFSKLGLKQVTGVSRVCIRKSKNILFVINKPDVFKSPGSDTYIIFGEAKIEDLTQHAQMSAIENLKPTREAPQLKTVEEDENEDVEEDSTGIEEKDIELVISQANTTRNKAIRALKEADNDIVNAIMSLTM
Protein: Class II histocompatibility antigen, M beta 1 chain (H2-M beta 1 chain) (P35737)
Organism: Mus musculus (Mouse)
Function: Plays a critical role in catalyzing the release of class II-associated invariant chain peptide (CLIP) from newly synthesized MHC class II molecules and freeing the peptide binding site for acquisition of antigenic peptides.
Subcellular location: Late endosome membrane {ECO:0000269|PubMed:7584146}; Single-pass type I membrane protein {ECO:0000269|PubMed:7584146}. Lysosome membrane {ECO:0000269|PubMed:7584146}; Single-pass type I membrane protein {ECO:0000269|PubMed:7584146}. Note=Localizes to late endocytic compartment. Associates with lysosome membranes.
Interaction partners:
- Class II histocompatibility antigen, M alpha chain
- H-2 class II histocompatibility antigen gamma chain
- H2-O alpha
- H-2 class II histocompatibility antigen, A beta chain
- H-2 class II histocompatibility antigen, E-B beta chain
- H-2 class II histocompatibility antigen, A-B alpha chain
- Histocompatibility 2, O region beta locus
- T-cell surface glycoprotein CD4
- T-cell surface glycoprotein CD3 zeta chain
- H2-M beta 2
Sequence:
MAALWLLLLVLSLHCMGAGGFVAHVESTCVLDDAGTPQDFTYCVSFNKDLLACWDPIVGKIVPCEFGVLYPLAENFSRILNKEESLLQRLQNGLPDCASHTQPFWNALTHRTRPPSVRVAQTTPFNTREPVMLACYVWGFYPADVTITWMKNGQLVPSHSNKEKTAQPNGDWTYQTVSYLALTPSYGDVYTCVVQHSGTSEPIRGDWTPGLSPIQTVKVSVSAATLGLGFIIFCVGFFRWRKSHSSSYTPLSGSTYPEGRH
Protein: SEED MATURATION PROTEIN 1 (Late embryogenesis abundant protein SMP1) (Q9LE44)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Protein chaperone involved in seed maturation and dormancy maintenance after high temperature fluctuation (e.g. secondary dormancy after 3 days at 40 degrees Celsius), probably by protecting heat labile proteins required for secondary dormancy (e.g. G6PDH, HOP3, SR45, ECP63, SCL33, RPL32B, ChlADR1, MSBP1, MBF1B, At3g01690, At1g15280, At1g15290, At2g31410, At1g11630, At1g65090, EMB2279, EMB1674 and RPL35C).
Interaction partners:
- Protein REDUCED CHLOROPLAST COVERAGE 3
- CASC3/Barentsz eIF4AIII binding protein
- Germin-like protein subfamily 1 member 3
- Germin-like protein subfamily 1 member 5
- UPF0540 protein At1g62060
- NADPH-dependent aldehyde reductase 1, chloroplastic
- Large ribosomal subunit protein uL29x
- Putative cytochrome c oxidase subunit 6b-like
- Nucleolin
- Late embryogenesis abundant protein 31
Sequence:
MAKNKDDIKYATAQAKLSEDEAIRVSYKHGTPLEGGKIAESEPVELFSSAQRIEKGKEQSAASGDQTQIQRDIKDIKGTRTDDSPR
Protein: Chemokine (C-X-C motif) ligand 11, duplicate 8 (A2BHJ6)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Interaction partners:
- C-X-C chemokine receptor type 3-2
- C-X-C chemokine receptor type 3
- Chemokine
- Immunity-related GTPase family, f1.
- AHA1, activator of heat shock protein ATPase homolog 1b.
- C-C motif chemokine 21
- Stromal cell-derived factor 1
Sequence:
MKTAAAFVALGCFLMVEVKGKIPDLKNRCLCADKGANNVNLKTIEKIQIIHPSPSCKRLEIVVTLMKGAGKKCLNPESNLGKNILKALRKKKLTAVRRMNPA
Protein: MKIAA4205 protein (Q5DTH6)
Organism: Mus musculus (Mouse)
Subcellular location: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
Interaction partners:
Sequence:
ENVSVFSSFWKPRWPLRNHGCWRCRRAMEMEQLTFRDVAVDFSPDEWECLDPPQQRLYRDVMVENYRNLVSVGEDSIPAELPTHCHHFMPFLSKMSAVACAFHKQYKPLSHHCTQNFSPEQILKYSFTEVTNGSYSLQHLYLREDCANVGGNKAAACHGRHKQCLITSNTKDNRDQEQKTALKKPHARTDTFDEPCVYNCKYPQEIFQHDLTLKESWEDLIDRLIFHSSNFIDKELRNRGPISKSDQVESSYPGRAILFSQQIPVSCGQKHNTNDCGLPATDPLLHSQNLDTDVWETPYMYKEISKGFSSGSLLNSCNDVVILEKSGQRDKVQNDFDHCLSPNNHQCNLPKKLFNCDNFFTQCSKLTIQQCNYIQDNHYKSIDCDTMFNKTLNVTTRKIQHSKKSYKCNECGKAFKYCSSYRKHSIIHTGEKPYKCKLCGKSFTQCASLKKHQRIHTGEKPYRCEECGRSFNHYSILGQHQRIHTGEKPYKCKQCGKSFTQCSSLQKHQVIHTGEKPYRCAECGKSFTQNSTLSQHQRIHTGEKPYKCEECGKAFTQCSSLRKHQRIHTGEKPYKCEVCGRAFNCRSSFTKHKRIHTGEKPYKCKDCDKAFIHCTNLIQHQRIHTGEKPYKCNECGKSFSQCSNLRKHERIHT
Protein: Putative dimethyl sulfoxide reductase chain YnfE (DMSO reductase) (EC 1.8.99.-) (P77374)
Organism: Escherichia coli (strain K12)
Function: Terminal reductase during anaerobic growth on various sulfoxide and N-oxide compounds.
Subcellular location: Cell membrane {ECO:0000250}; Peripheral membrane protein {ECO:0000250}; Cytoplasmic side {ECO:0000250}.
Interaction partners:
- Probable anaerobic dimethyl sulfoxide reductase chain YnfG
- Anaerobic dimethyl sulfoxide reductase chain YnfH
- Probable dimethyl sulfoxide reductase chain YnfF
- Tat proofreading chaperone DmsD
- Anaerobic dimethyl sulfoxide reductase chain B
- Probable hypoxanthine oxidase XdhD
- Putative oxidoreductase YgfK
- Anaerobic dimethyl sulfoxide reductase chain C
- Thioredoxin reductase
- Uncharacterized protein YgfM
Sequence:
MSKNERMVGISRRTLVKSTAIGSLALAAGGFSLPFTLRNAAAAVQQAREKVVWGACSVNCGSRCALRLHVKDNEVTWVETDNTGSDEYGNHQVRACLRGRSIRRRINHPDRLNYPMKRVGKRGEGKFERISWDEALDTIASSLKKTVEQYGNEAVYIQYSSGIVGGNMTRSSPSASAVKRLMNCYGGSLNQYGSYSTAQISCAMPYTYGSNDGNSTTDIENSKLVVMFGNNPAETRMSGGGITYLLEKAREKSNAKMIVIDPRYTDTAAGREDEWLPIRPGTDAALVAGIAWVLINENLVDQPFLDKYCVGYDEKTLPADAPKNGHYKAYILGEGDDKTAKTPQWASQITGIPEDRIIKLAREIGTAKPAYICQGWGPQRQANGELTARAIAMLPILTGNVGISGGNSGARESTYTITIERLPVLDNPVKTSISCFSWTDAIDHGPQMTAIRDGVRGKDKLDVPIKFIWNYAGNTLVNQHSDINKTHEILQDESKCEMIVVIENFMTSSAKYADILLPDLMTVEQEDIIPNDYAGNMGYLIFLQPVTSEKFERKPIYWILSEVAKRLGPDVYQKFTEGRTQEQWLQHLYAKMLAKDPALPSYDELKKMGIYKRKDPNGHFVAYKAFRDDPEANPLKTPSGKIEIYSSRLAEIARTWELEKDEVISPLPVYASTFEGWNSPERRTFPLQLFGFHYKSRTHSTYGNIDLLKAACRQEVWINPIDAQKRGIANGDMVRVFNHRGEVRLPAKVTPRILPGVSAMGQGAWHEANMSGDKIDHGGCVNTLTTLRPSPLAKGNPQHTNLVEIEKI
Protein: Beta-2-syntrophin (59 kDa dystrophin-associated protein A1 basic component 2) (Syntrophin-3) (SNT3) (Syntrophin-like) (SNTL) (Q13425)
Organism: Homo sapiens (Human)
Function: Adapter protein that binds to and probably organizes the subcellular localization of a variety of membrane proteins. May link various receptors to the actin cytoskeleton and the dystrophin glycoprotein complex. May play a role in the regulation of secretory granules via its interaction with PTPRN.
Subcellular location: Membrane. Cytoplasmic vesicle, secretory vesicle membrane; Peripheral membrane protein. Cell junction {ECO:0000250}. Cytoplasm, cytoskeleton. Note=Membrane-associated. In muscle, it is exclusively localized at the neuromuscular junction (By similarity). In insulinoma cell line, it is enriched in secretory granules. {ECO:0000250}.
Interaction partners:
- Utrophin
- Dystrophin
- Dystrobrevin alpha
- Dystrobrevin beta
- Gamma-2-syntrophin
- Beta-1-syntrophin
- Alpha-1-syntrophin
- Dystroglycan 1
- Alpha-1D adrenergic receptor
- Microtubule-associated serine/threonine-protein kinase 2
Sequence:
MRVAAATAAAGAGPAMAVWTRATKAGLVELLLRERWVRVVAELSGESLSLTGDAAAAELEPALGPAAAAFNGLPNGGGAGDSLPGSPSRGLGPPSPPAPPRGPAGEAGASPPVRRVRVVKQEAGGLGISIKGGRENRMPILISKIFPGLAADQSRALRLGDAILSVNGTDLRQATHDQAVQALKRAGKEVLLEVKFIREVTPYIKKPSLVSDLPWEGAAPQSPSFSGSEDSGSPKHQNSTKDRKIIPLKMCFAARNLSMPDLENRLIELHSPDSRNTLILRCKDTATAHSWFVAIHTNIMALLPQVLAELNAMLGATSTAGGSKEVKHIAWLAEQAKLDGGRQQWRPVLMAVTEKDLLLYDCMPWTRDAWASPCHSYPLVATRLVHSGSGCRSPSLGSDLTFATRTGSRQGIEMHLFRVETHRDLSSWTRILVQGCHAAAELIKEVSLGCMLNGQEVRLTIHYENGFTISRENGGSSSILYRYPFERLKMSADDGIRNLYLDFGGPEGELTMDLHSCPKPIVFVLHTFLSAKVTRMGLLV
Protein: Actin-7 (EC 3.6.4.-) (Actin-2) (P53492)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Actins are highly conserved proteins that are involved in various types of cell motility and are ubiquitously expressed in all eukaryotic cells. Essential component of cell cytoskeleton; plays an important role in cytoplasmic streaming, cell shape determination, cell division, organelle movement and extension growth. This is considered as one of the vegetative actins which is involved in the regulation of hormone-induced plant cell proliferation and callus formation. Required for the trafficking and endocytic recycling of ABCG36/PEN3 between the trans-Golgi network and the plasma membrane in root epidermal and cap cells.
Subcellular location: Cytoplasm, cytoskeleton.
Interaction partners:
- Actin-interacting protein 1-2
- Histone H3-like centromeric protein CENH3
- Histone H3-like 4
- Histone H3.3
- Histone H3-like 2
- Histone H3.1
- Histone H3-like 5
- Histone H3-like 3
- Histone H3-like 1
- Tubulin alpha-5 chain
Sequence:
MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDSLMKILTERGYMFTTTAEREIVRDIKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQVITIGAERFRCPEVLFQPSLIGMEAPGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKSEYDESGPSIVHRKCF
Protein: Large ribosomal subunit protein mL57 (54S ribosomal protein L15, mitochondrial) (Q9Y7Z7)
Organism: Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Subcellular location: Mitochondrion {ECO:0000269|PubMed:16823372}.
Interaction partners:
- Large ribosomal subunit protein bL19m
- Large ribosomal subunit protein mL44
- Small ribosomal subunit protein uS2m
- Large ribosomal subunit protein mL38
- Large ribosomal subunit protein uL3m
- Uncharacterized urease accessory protein ureG-like
- Large ribosomal subunit protein bL31m
- Large ribosomal subunit protein uL23m
- Large ribosomal subunit protein uL15m
Sequence:
MLTRHCNRLGLQIENKFVFRSSSWNCVRRIGKIACNENKYRYEMTSTEEDIDSFFSRVFGEKNYISDKSLREQIVTHKSYKHGLKRYNEPFVSVGNAVIDVCLLNHYLESGNFSTIPSYKDLVNLRSPARLAEVAKKWNPETATQCILPLKGPNSPSSSSFEKIYSSIVSGLVAVVYFQKGGVEAMNFCKKSIISDLTKDFVRPNTVHNQ
Protein: Large ribosomal subunit protein uL3 (60S ribosomal protein L3) (Q59LS1)
Organism: Candida albicans (strain SC5314 / ATCC MYA-2876) (Yeast)
Function: Component of the ribosome, a large ribonucleoprotein complex responsible for the synthesis of proteins in the cell. The small ribosomal subunit (SSU) binds messenger RNAs (mRNAs) and translates the encoded message by selecting cognate aminoacyl-transfer RNA (tRNA) molecules. The large subunit (LSU) contains the ribosomal catalytic site termed the peptidyl transferase center (PTC), which catalyzes the formation of peptide bonds, thereby polymerizing the amino acids delivered by tRNAs into a polypeptide chain. The nascent polypeptides leave the ribosome through a tunnel in the LSU and interact with protein factors that function in enzymatic processing, targeting, and the membrane insertion of nascent chains at the exit of the ribosomal tunnel (Probable). RPL3 plays a role in coordinating processes of accommodating the aminoacyl-tRNA in the PTC (By similarity).
Subcellular location: Cytoplasm {ECO:0000305|PubMed:35613268}.
Interaction partners:
- Large ribosomal subunit protein eL32
- Large ribosomal subunit protein uL4
- Large ribosomal subunit protein eL36
- Large ribosomal subunit protein uL16
- Large ribosomal subunit protein uL24
- Large ribosomal subunit protein eL14
- Ubiquitin-ribosomal protein eS31 fusion protein
- Small ribosomal subunit protein uS10
- Small ribosomal subunit protein uS4
- Small ribosomal subunit protein eS7
Sequence:
MSHRKYEAPRHGSLGFLPRKRAAKQRGRVKSFPKDVKSKPVALTAFLGYKAGMTTIVRDLDRPGSKMHKREVVEAATVVDTPPMVVVGVVGYVETPRGLRSLTTVWAEHLSEEVRRRFYKNWYKSKKKAFTKYSGKYATDAKQVETELARIKKYASVVRVLAHTQIKKTPLSQKKAHLAEIQINGGSVSDKVDWAKEHFEKEVSVDSVFEQDEMIDVIAVTKGHGFEGVTHRWGTKKLPRKTHRGLRKVACIGAWHPANVNWTVARAGQNGYHHRTSINHKVYRVGKGTDEANGATEFDRTKKTINPMGGFVRYGNVNNDFVLLKGSIPGVKKRVVTLRKSLYVDTSRRAVEKVNLKWIDTASRFGKGRFQTPAEKHAFMGTLKKDLEN
Protein: Photosystem II reaction center protein M (PSII-M) (P0C411)
Organism: Oryza sativa (Rice)
Function: One of the components of the core complex of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. This subunit is found at the monomer-monomer interface.
Subcellular location: Plastid, chloroplast thylakoid membrane {ECO:0000255|HAMAP-Rule:MF_00438}; Single-pass membrane protein {ECO:0000255|HAMAP-Rule:MF_00438}.
Interaction partners:
Sequence:
MEVNILAFIATALFILVPTAFLLIIYVKTVSQND
Protein: Crumbs cell polarity complex component 1 (A0A8I6AQJ2)
Organism: Rattus norvegicus (Rat)
Interaction partners:
Sequence:
MKLKKTAYLLALYLSSSLLICVKNSFCNKNNTRCLSNSCQNNSTCKRFPQDSSCCLDTANDLDTDCEDLKDPCLSSPCQGTATCVNIPGERSFLCQCPPGYSGLTCDTATNSCGGNLCQHGGTCHKDPEHPVCICPPGYAGRFCETDHNECDSSPCHNGAVCQDRINGYSCFCVPGYQGRHCDLEVDECVSDPCMNEAVCLNEIGRYTCVCPQEYSGVNCELEIDECGSQPCLHGATCRDALGGYFCDCAPGFLGDHCELNFNECESQPCLHGGLCVDGRNSYHCDCTGSGFRGIHCESLIPLCWSKPCHNDATCEDTVDSYICHCWPGYTGALCETDINECSSNPCQFGGECAELSSQDLYGNTAGLPSSFSYLGASGYVCICLPGFTGRHCEEDIDECLPNPCLNGGTCQNLPGNYTCHCPFDDTSRTFYGGEDCSEILLGCTHHQCLNNGKCIPHFQNGQHEFTCQCPSGYAGPLCETVTTLSFESNGFLWVTSGSHTSMGSECNISLKFQTVQPNALLLVRGNKDMSVKLELLDGCVHLSIEVWNQSKVLLYISHNTSDGEWHLVEVTFAETITLALNGSSCKEKCTTKSSVSIENHQSICALQNSFLGGLPMGTASDSMSVLNIYNVPSTPSFVGCLQDIRFDLNHITLESISSGLSSNVKAGCLRKDWCESQPCQNRGRCINLWQGYRCECDRPYAGSNCLKGERSGVPGSTMPPGRAISNHPGCHPLLGNIGTPQDFRCLLTKEIKGHSHDMY
Protein: YTH domain-containing family protein (Q802Z0)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Interaction partners:
- N
- RNA demethylase ALKBH5
- Pre-mRNA-splicing regulator WTAP
- FTO alpha-ketoglutarate-dependent dioxygenase.
- Heterogeneous nuclear ribonucleoprotein C
- RNA-binding protein 15
- Zinc finger CCCH domain-containing protein 13
- N
- Protein virilizer homolog isoform X2
- RNA N
Sequence:
MSTTSIDPQTSKGQDAKVQNGSLHQKETVHDNDFEPYLTGQSNPNNSYQSMTDPYLSSYYAPSIGFPYPLSEAPWSTGGDPPIPYLTPYAPLSNGDHHFMHDTVFGQPGGLGSSIYPHRFNFFPENPAFSAWGTSGSQGQQTQSSAYGGSYSYPPSSLGGTLVPDGQTGFPSDTLNKAPGMNSLEQGMVGLKIGGDVTGGGSGVKTVGSVIGGGPVAAAVATGNGGTPIGLPPPKPTSWAAIASKPAKPQQLKVKSKPGMPMAGGTLPPPPIKHNMDIGTWDNKGPVTKVASSLPPHHHHQQQPPLHSQGHLPPHPHGLPPPPQPPMPSAQSLAQQMAMQGPPPPQPYQNHAPAPPPQTRWVAPRNRNPGYGGGGSVDSSGSSSGGGVGNGGGGGPPGSGAIESHPVLEKLRAAHSYNPKEFDWNLKNGRVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDSAFRAINGKGPVYLLFSVNGSGHFCGVAEMRSPVDYGTSAGVWAQDKWKGKFDVDWLFVKDVPNSQLRHIRLENNDNKPVTNSRDTQEVPLEKAKQVLKIIATYKHTTSIFDDFSHYEKRQEEEEVVRKNLEPAPIQNRSRLDQERQNRNKQ
Protein: Down syndrome cell adhesion molecule 1, isoform AQ (Q0E9L1)
Organism: Drosophila melanogaster (Fruit fly)
Interaction partners:
Sequence:
MNMPNERLKWLMLFAAVALIACGSQTLAANPPDADQKGPVFLKEPTNRIDFSNSTGAEIECKASGNPMPEIIWIRSDGTAVGDVPGLRQISSDGKLVFPPFRAEDYRQEVHAQVYACLARNQFGSIISRDVHVRAVVSQFYITEAENEYVIKGNAAVVKCKIPSFVADFVQVEAWVDEEGMELWRNNATDAYDGKYLVLPSGELHIREVGPEDGYKSYQCRTKHRLTGETRLSATKGRLVITEPVGTVSPKISTGEDFKHLKGKSSQDLSILCPAQAYPQPFFRWYKFIEGTTRKQAVVLNDRVKQVSGTLIIKDAVVEDSGKYLCVVNNSVGGESVETVLTVTAPLSAKIDPPTQTVDFGRPAVFTCQYTGNPIKTVSWMKDGKAIGHSEPVLRIESVKKEDKGMYQCFVRNDQESAEASAELKLGGRFDPPVIRQAFQEETMEPGPSVFLKCVAGGNPTPEISWELDGKKIANNDRYQVGQYVTVNGDVVSYLNITSVHANDGGLYKCIAKSKVGVAEHSAKLNVYGLPYIRQMEKKAIVAGETLIVTCPVAGYPIDSIVWERDNRALPINRKQKVFPNGTLIIENVERNSDQATYTCVAKNQEGYSARGSLEVQVMVAPKIAPFDFGDEPSNFGESASVQCLVTSGDFPVSFAWLFNGREINENVYDVSMVKLGKKISALSIDIVRDHHAGNYTCVAVNRATSVNFTAELVVNVPPRWILEPTDKAFAQGSDAKVECKADGFPKPQVTWKKAVGDTPGEYKDLKKSDNIRVEEGTLHVDNIQKTNEGYYLCEAINGIGSGLSAVIMISVQAPPEFTEKLRNQTARRGEPAVLQCEAKGEKPIGILWNMNNMRLDPKNDNRYTIREEILSTGVMSSLSIKRTERSDSALFTCVATNAFGSDDASINMIVQEVPEMPYALKVLDKSGRSVQLSWAQPYDGNSPLDRYIIEFKRSRASWSEIDRVIVPGHTTEAQVQKLSPATTYNIRIVAENAIGTSQSSEAVTIITAEEAPSGKPQNIKVEPVNQTTMRVTWKPPPRTEWNGEILGYYVGYKLSNTNSSYVFETINFITEEGKEHNLELQNLRVYTQYSVVIQAFNKIGAGPLSEEEKQFTAEGTPSQPPSDTACTTLTSQTIRVGWVSPPLESANGVIKTYKVVYAPSDEWYDETKRHYKKTASSDTVLHGLKKYTNYTMQVLATTAGGDGVRSVPIHCQTEPDVPEAPTDVKALVMGNAAILVSWRPPAQPNGIITQYTVYSKAEGAETETKTQKVPHYQMSFEATELEKNKPYEFWVTASTTIGEGQQSKSIVAMPSDQVPAKIASFDDTFTATFKEDAKMPCLAVGAPQPEITWKIKGVEFSANDRMRVLPDGSLLIKSVNRQDAGDYSCHAENSIAKDSITHKLIVLAPPQSPHVTLSATTTDALTVKLKPHEGDTAPLHGYTLHYKPEFGEWETSEVSVDSQKHNIEGLLCGSRYQVYATGFNNIGAGEASDILNTRTKGQKPKLPEKPRFIEVSSNSVSLHFKAWKDGGCPMSHFVVESKKRDQIEWNQISNNVKPDNNYVVLDLEPATWYNLRITAHNSAGFTVAEYDFATLTVTGGTIAPSRDLPELSAEDTIRIILSNLNLVVPVVAALLVIIIAIIVICILRSKGNHHKDDVVYNQTMGPGATLDKRRPDLRDELGYIAPPNRKLPPVPGSNYNTCDRIKRGRGGLRSNHSTWDPRRNPNLYEELKAPPVPMHGNHYGHAHGNAECHYRHPGMEDEICPYATFHLLGFREEMDPTKAMNFQTFPHQNGHAGPVPGHAGTMLPPGHPGHVHSRSGSQSMPRANRYQRKNSQGGQSSIYTPAPEYDDPANCAEEDQYRRYTRVNSQGGSLYSGPGPEYDDPANCAPEEDQYGSQYGGPYGQPYDHYGSRGSMGRRSIGSARNPGNGSPEPPPPPPRNHDMSNSSFNDSKESNEISEAECDRDHGPRGNYGAVKRSPQPKDQRTTEEMRKLIERNETGPKQLQLQQANGAGFTAYDTMAV