wanglab/gogpt-training-data huggingface dataset:
Protein: Protein DMP3 (AtDMP3) (Q9STW3)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Involved in membrane remodeling.
Subcellular location: Endoplasmic reticulum membrane {ECO:0000269|PubMed:20712629}; Multi-pass membrane protein {ECO:0000255}.
Interaction partners:
Sequence:
MSSPSSLTQRNPTSSQEQSESVPQLRRQTSQHAVMSQTLTSAANLANLLPTGTLLAFTLLIPVFTSNGSCDYPTQVLTIVLLTLLSISCFLSSFTDSVKAEDGNVYYGFATRKGMWVFDYPDPDGLGLPNLSKYRIRIIDWIHAVLSVLVFGAVALRDKNAVSCFYPAPEQETKKVLDIVPMGVGVICGMLFLVFPARRHGIGYPVTGDGGRR
Protein: Photosynthetic reaction center cytochrome c subunit (Cytochrome c558/c559) (P07173)
Organism: Blastochloris viridis (Rhodopseudomonas viridis)
Function: The reaction center of purple bacteria contains a tightly bound cytochrome molecule which re-reduces the photo oxidized primary electron donor.
Subcellular location: Cellular chromatophore membrane {ECO:0000269|PubMed:10024457, ECO:0000269|PubMed:9351808}; Lipid-anchor {ECO:0000269|PubMed:22054235, ECO:0000269|Ref.4}.
Interaction partners:
- Reaction center protein M chain
- Light-harvesting protein B-1015 alpha chain
- Reaction center protein H chain
- Reaction center protein L chain
- Light-harvesting protein B-1015 beta chain
- Light-harvesting protein B-1015 gamma chain
- Uncharacterized protein in pufB 5'region
- Uncharacterized protein
- Magnesium protoporphyrin IX methyltransferase
- Chlorophyllide reductase subunit BchX
Sequence:
MKQLIVNSVATVALASLVAGCFEPPPATTTQTGFRGLSMGEVLHPATVKAKKERDAQYPPALAAVKAEGPPVSQVYKNVKVLGNLTEAEFLRTMTAITEWVSPQEGCTYCHDENNLASEAKYPYVVARRMLEMTRAINTNWTQHVAQTGVTCYTCHRGTPLPPYVRYLEPTLPLNNRETPTHVERVETRSGYVVRLAKYTAYSALNYDPFTMFLANDKRQVRVVPQTALPLVGVSRGKERRPLSDAYATFALMMSISDSLGTNCTFCHNAQTFESWGKKSTPQRAIAWWGIRMVRDLNMNYLAPLNASLPASRLGRQGEAPQADCRTCHQGVTKPLFGASRLKDYPELGPIKAAAK
Protein: Protein tyrosine phosphatase receptor type C-associated protein (PTPRC-associated protein) (CD45-associated protein) (CD45-AP) (Lymphocyte phosphatase-associated phosphoprotein) (Q14761)
Organism: Homo sapiens (Human)
Subcellular location: Membrane {ECO:0000305}; Single-pass membrane protein {ECO:0000305}.
Interaction partners:
- Receptor-type tyrosine-protein phosphatase C
- Tyrosine-protein kinase Lck
Sequence:
MALPCTLGLGMLLALPGALGSGGSAEDSVGSSSVTVVLLLLLLLLLATGLALAWRRLSRDSGGYYHPARLGAALWGRTRRLLWASPPGRWLQARAELGSTDNDLERQEDEQDTDYDHVADGGLQADPGEGEQQCGEASSPEQVPVRAEEARDSDTEGDLVLGSPGPASAGGSAEALLSDLHAFAGSAAWDDSARAAGGQGLHVTAL
Protein: Neurocalcin homolog (DrosNCa) (P42325)
Organism: Drosophila melanogaster (Fruit fly)
Function: Calcium-binding protein that is essential for promoting night-time sleep and inhibiting nocturnal hyperactivity. During the night-time it promotes sleep by limiting synaptic output from arousal- and wake-promoting neurons within the C01- and A05- domains that include the mushroom body, and the antennal mechanosensory and motor center. Regulated by the circadian clock network and light-sensing circuits that include the CRY photoreceptor; it is likely that both of these internal and external cues are required to define the temporal window (the night-time) during which this protein functions. Inhibits the phosphorylation of rhodopsin in a calcium-dependent manner.
Interaction partners:
- Uncharacterized protein, isoform A
- Translation factor waclaw, mitochondrial
- Phosphatidylinositol 4-kinase beta
Sequence:
MGKQNSKLKPEVLEDLKQNTEFTDAEIQEWYKGFLKDCPSGHLSVEEFKKIYGNFFPYGDASKFAEHVFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLKWAFSMYDLDGNGYISRQEMLEIVTAIYKMVGSVMKMPEDESTPEKRTDKIFRQMDRNKDGKLSLEEFIEGAKSDPSIVRLLQCDPQSH
Protein: RNA helicase (EC 3.6.4.13) (P90529)
Organism: Dictyostelium discoideum (Social amoeba)
Interaction partners:
- Eukaryotic translation initiation factor 4 gamma
- von Willebrand factor A domain-containing protein DDB_G0286969
- Glutathione S-transferase domain-containing protein
- Eukaryotic translation initiation factor 3 subunit I
- Eukaryotic translation initiation factor 3 subunit B
- Small ribosomal subunit protein eS30
- Eukaryotic translation initiation factor 3 subunit C
- Small ribosomal subunit protein uS3
- Small ribosomal subunit protein eS6
- Small ribosomal subunit protein eS1
Sequence:
MSASNKDDQLMKNEFESTYDKIVDSFDNMELPKDLLRGIYSYGFEKPSAIQQRAIIPLSKGFDIIAQAQSGTGKTATFTVGILSRIDISVLKCQALIIAPTRELAQQIQKVVLALGEYLHIKSYACIGGTKITDDIQALQSGVHVVVGTPGRVFEMLSRGIINRDTIRIFCLDEADEMLSRGFKDQIYEIFRFLPKTIQVGLFSATMTDETLGITSKFMQNPVSILVKKDELTLEGIRQFYVNVGVEQGKFEVLTDLYETLSITQSVIFCNTRRKVDWLTSKMTEQKFTVSSTHGDQKDRDGILQAFRSGATRVLITTDLLARGIDVQQVSLVINFDLPTNIENYIHRIGRSGRFGRKGVAINFITDAERGQIDELSRHYNTYIAEMPQDIGSFL
Protein: Small ribosomal subunit protein eS17x (40S ribosomal protein S17-3) (Q9SQZ1)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Interaction partners:
- Small ribosomal subunit protein uS14z/uS14y/uS14x
- Small ribosomal subunit protein eS30z/eS30y/eS30x
- Small ribosomal subunit protein eS19x
- Small ribosomal subunit protein eS24z
- Small ribosomal subunit protein uS10z/uS10x
- Small ribosomal subunit protein uS13z/uS13y/uS13x
- Small ribosomal subunit protein eS12y
- Small ribosomal subunit protein uS3x
- Small ribosomal subunit protein eS28x
- Small ribosomal subunit protein eS21z
Sequence:
MGRVRTKTVKKSSRQVIEKYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDESAIKIDDVKVDKETLEMLASLGMSDIAGISQVETQQAMAPAVFGRPAGRYQR
Protein: Nuclear transcription factor Y subunit alpha (CAAT box DNA-binding protein subunit A) (Nuclear transcription factor Y subunit A) (NF-YA) (P23511)
Organism: Homo sapiens (Human)
Function: Component of the sequence-specific heterotrimeric transcription factor (NF-Y) which specifically recognizes a 5'-CCAAT-3' box motif found in the promoters of its target genes. NF-Y can function as both an activator and a repressor, depending on its interacting cofactors. NF-YA positively regulates the transcription of the core clock component BMAL1.
Subcellular location: Nucleus.
Interaction partners:
- Nuclear transcription factor Y subunit gamma
- Nuclear transcription factor Y subunit beta
- Zinc fingers and homeoboxes protein 1
- MHC class II transactivator
- TATA-box-binding protein
- Histone acetyltransferase p300
- TATA box-binding protein-like 2
- TATA box-binding protein-like 1
- Transcription factor Sp1
- Inhibitor of growth protein 2
Sequence:
MEQYTANSNSSTEQIVVQAGQIQQQQQGGVTAVQLQTEAQVASASGQQVQTLQVVQGQPLMVQVSGGQLITSTGQPIMVQAVPGGQGQTIMQVPVSGTQGLQQIQLVPPGQIQIQGGQAVQVQGQQGQTQQIIIQQPQTAVTAGQTQTQQQIAVQGQQVAQTAEGQTIVYQPVNADGTILQQVTVPVSGMITIPAASLAGAQIVQTGANTNTTSSGQGTVTVTLPVAGNVVNSGGMVMMVPGAGSVPAIQRIPLPGAEMLEEEPLYVNAKQYHRILKRRQARAKLEAEGKIPKERRKYLHESRHRHAMARKRGEGGRFFSPKEKDSPHMQDPNQADEEAMTQIIRVS
Protein: Dephospho-CoA kinase CAB5 (DPCK) (EC 2.7.1.24) (Dephosphocoenzyme A kinase) (Q03941)
Organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Function: Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A.
Subcellular location: Endoplasmic reticulum {ECO:0000269|PubMed:14690591}. Mitochondrion {ECO:0000269|PubMed:14690591, ECO:0000269|PubMed:16823961}. Nucleus {ECO:0000269|PubMed:14690591}. Note=Nuclear envelope. {ECO:0000269|PubMed:14690591}.
Interaction partners:
- Phosphopantetheine adenylyltransferase
- Phosphopantothenate--cysteine ligase CAB2
- Coenzyme A biosynthesis protein 3
- Phosphopantothenoylcysteine decarboxylase subunit SIS2
- Phosphopantothenoylcysteine decarboxylase subunit VHS3
- L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase
- Mitochondrial holo-[acyl-carrier-protein] synthase
- Pantothenate kinase CAB1
- Threonylcarbamoyl-AMP synthase
- Pantoate--beta-alanine ligase
Sequence:
MLVVGLTGGIACGKSTVSRRLRDKYKLPIVDADKIARQVVEPGQNAYDQIVLYFKDKIPNLLLEDGHLNREALGKWVFSHKEDLQALNGITHPAIRYAMFKEIGYYYLKGYRMCVLDVPLLFEGNLDSICGVTVSVICTQELQLERLMTRNPELSEEDAKNRLNSQMSTEERMARSDYILQNNSTLVDLYEQIESVVKKIQPSKLRTVLEYFPPFGAVSASSIVMSRLLMKKLQNKKSSAV
Protein: Lectin29Ca (Q6GUX5)
Organism: Drosophila melanogaster (Fruit fly)
Interaction partners:
Sequence:
MYKYATCIFSIFALWNFWGVSAKKQDTSTGTNELPKAPMPYYTIENIDMHQQHWFTYNSLRQNGTLWRIGNMEQRLEMRLQSFQNQMETQLRALKQQIEPYMENVKMSNKIKMSVFKKIGSRHFYLEKQKKMPWDSAYDTCRQMGGHLANILDEKELNEIFSEETKKKYWVDINSRANDGASWISTLSGRDVPFLKWKPDLATNIHRHCVYINSNEMYFENCANDNYFACQAEQWA
Protein: Spermatogenesis-associated protein 4 (Spermatogenesis-related gene 2 protein) (Testis and spermatogenesis cell-related protein 2) (Testis spermatocyte apoptosis-related gene 2 protein) (Q8K3V1)
Organism: Mus musculus (Mouse)
Function: May play a role in apoptosis regulation.
Subcellular location: Nucleus {ECO:0000250|UniProtKB:Q8NEY3}.
Interaction partners:
- Spermatogenesis-associated protein 17
Sequence:
MAAAGQAEECLPLPAAESSKTSLPTPPAVPAGKKPKKCLVYPHPPRSSRLSRSVLRWLQGLDLSFFPRNVTRDFSNGYLVAEIFCIYYPWDLRLSSFENGTSLKVKLDNWAQIEKFLAKKKFKLPKELIHGTIHCKAGVPEILIQEIYTLLTHQEIRSIQDDLANFTDYIYQMRLPLVPRNTVSKSIKNNIRLSELLSNPNVLSNELKIEFLILLQMLQRKLSRKLNPGWFDVKPTVGEITIDRLPAHSYKRRYKSRGSKEKAAQPLSKSDNDGNARKEIHVKQSGNPCENTENL
Protein: Dek, isoform A (Dek, isoform E) (LD22367p) (LP14433p) (A1ZAK4)
Organism: Drosophila melanogaster (Fruit fly)
Subcellular location: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
Interaction partners:
Sequence:
MDANKAAETAAKENAADKVSDVENASVTAGVAKAVGAQPERGSKDAAESPAAVDASASAATDDVADKKAKGDSTAVSNTESDAAAADKKEKSPSPVIKKSNNKDAKKEDNSEKDEENSEDGDEPEDEADEKASDEESEKKKPKLDAEDKIKDATDESKPKSGADKPKKPEPKAKNGKVAKEEDDDEEDEDDEDAEDDDGDENDGLDKNNEVAEDDENVVALAEIDRINENINKTRVDGLQTLHAICFGAQGKNNVVKKNLRSFAGFEFAKDSAEYNKKLEAIKKVDNKGLRSICEILTLDRKGSKNETVLRVLKFLMEPDESLCLEQGDEEEEEDAEDEDLDEDEEDPPSEEDKKRKSGKSSGGAGRGSARNSTGRPRRATAGKKMSAYVDFSSSDDSEQKVAVPKRRRNDDSESGSDYNPSANSDSDGGRGGGAGAAGRKVPSRGGRGRPARKSRRRNSDSEEEEESEVSDADSDVPKRKRGSVGKRGRPAAPASAGRRGRGRGAASRKRKDSDSEDEEVSEDEEEEDVSDFASDQSEEERPKKSKKPITPAKNSKANNKSKPAGKADSRSKKSKKESSEEDDDVDDKDESDEDEPLTKKGKQAFPTDEQIRGYVKEILDKANLEEITMKTVCKQVYAKYPDFDLTDKKDFIKATVKALIAT
Protein: Ino eighty subunit 1 (P43579)
Organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Function: Probably involved in transcription regulation via its interaction with the INO80 complex, a chromatin-remodeling complex.
Subcellular location: Nucleus {ECO:0000269|PubMed:14562095}.
Interaction partners:
- Ino eighty subunit 3
- Non-histone protein 10
- Ino eighty subunit 5
- Ino eighty subunit 4
- RuvB-like protein 2
- RuvB-like protein 1
- Transcription initiation factor TFIID subunit 14
- Actin-related protein 5
- Chromatin-remodeling ATPase INO80
- Actin-related protein 4
Sequence:
MGKRVYDPIHDTFQLREDNSDETKADSPMQSVKSGSQEEASPSSIQSETETVTTKSIPVIHEIEIDDKNDDDSTQSEEENTNILLNFEPSTVPEATGASTATGPVTTNTVRRKPKESNASKYNRHLKKPDGEPFNRKDIQFSFMQELLMDKRQIFTNVLKPLYKNSIVPINIDGDKLSINVTDKEYDARTFVFNDKLTFAQLYVLTIATSIKCSKILRDKLLLDQQVAFSTCVLALLVNIGRLNTTINFYLEMTSQLRTFHSVPVLQLHANDPKLLQDTPRLKSILKNLPWGNEQLSLMETYKKVDQNDGEVDTVNKFNIINMLFSICDNSGLIDKRFLSKYVEVESKAQEQDMVDEQNEVKETEAENEKQESKAAYATTLFDILDYSKYEPKDRSNILIWLLYIHLETNLSQEEVEESVRFFNGLEDGAPAGKFILRCTERSYDTDPEDELEFGANQRIKRREFMSKMEEGRKRERTNVTEVKKPSIGGDKSEEDGEGEDDKSEETVEETRSLLTPTPILESSSPMTLNRKKVTPQLPKVTPAAPTETEEEITSAAIIDKNDLNLTPLKKYNSSATVNKVDKLISLDLNKHVSENGKTQEEFLADLKKSQVPNRLKRRDIGLIKIFNEFEDIPVASVLGIRGKKRKKFKDNLLGFETDFMKNLGASKKVLLNKIERAEIDDEEATAMFKLE
Protein: Large ribosomal subunit protein uL11 (60S ribosomal protein L12) (P35979)
Organism: Mus musculus (Mouse)
Function: Binds directly to 26S ribosomal RNA.
Subcellular location: Cytoplasm {ECO:0000250|UniProtKB:P30050}.
Interaction partners:
- Ubiquitin-ribosomal protein eS31 fusion protein
- Small ribosomal subunit protein eS21
- Small ribosomal subunit protein eS1
- Large ribosomal subunit protein uL4
- Large ribosomal subunit protein eL15
- Large ribosomal subunit protein eL34
- Large ribosomal subunit protein eL27
- Large ribosomal subunit protein uL15
- Large ribosomal subunit protein eL30
- Small ribosomal subunit protein eS8
Sequence:
MPPKFDPNEVKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITVKLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIARQMRHRSLARELSGTIKEILGTAQSVGCNVDGRHPHDIIDDINSGAVECPAS
Protein: Kin of IRRE-like protein 3 (Kin of irregular chiasm-like protein 3) (Nephrin-like protein 2) (mKirre) [Cleaved into: Processed kin of IRRE-like protein 3] (Q8BR86)
Organism: Mus musculus (Mouse)
Function: Synaptic adhesion molecule required for the formation of target-specific synapses. Required for formation of target-specific synapses at hippocampal mossy fiber synapses. Required for formation of mossy fiber filopodia, the synaptic structures connecting dentate granule and GABA neurons. Probably acts as a homophilic adhesion molecule that promotes trans-cellular interactions and stabilize mossy fiber filipodia contact and subsequent synapse formation. Required for the coalescence of vomeronasal sensory neuron axons. May be involved in the hematopoietic supportive capacity of stroma cells; the secreted extracellular domain is directly responsible for supporting hematopoietic stem cells.
Subcellular location: Cell membrane {ECO:0000269|PubMed:12665856}; Single-pass type I membrane protein {ECO:0000269|PubMed:12665856}. Cell projection, axon {ECO:0000269|PubMed:26575286}. Cell projection, dendrite {ECO:0000269|PubMed:26575286}.; SUBCELLULAR LOCATION: [Processed kin of IRRE-like protein 3]: Secreted {ECO:0000269|PubMed:12665856}.
Interaction partners:
- Nephrin
- CD2-associated protein
- Podocin
Sequence:
MRPFQLDLLFLCFFLFSQELGLQKRGCCLVLGYMAKDKFRRMNEGQVYSFSQQPQDQVVVSGQPVTLLCAIPEYDGFVLWIKDGLALGVGRDLSSYPQYLVVGNHLSGEHHLKILRAELQDDAVYECQAIQAAIRSRPARLTVLVPPDDPIILGGPVISLRAGDPLNLTCHADNAKPAASIIWLRKGEVINGATYSKTLLRDGKRESIVSTLFISPGDVENGQSIVCRATNKAIPGGKETSVTIDIQHPPLVNLSVEPQPVLEDNIVTFHCSAKANPAVTQYRWAKRGHIIKEASGELYRTTVDYTYFSEPVSCEVTNALGSTNLSRTVDVYFGPRMTSEPQSLLVDLGSDAVFSCAWIGNPSLTIVWMKRGSGVVLSNEKTLTLKSVRQEDAGKYVCRAVVPRVGAGEREVTLTVNGPPIISSTQTQHALHGEKGQIKCFIRSTPPPDRIAWSWKENVLESGTSGRYTVETVNTEEGVISTLTISNIVRADFQTIYNCTAWNSFGSDTEIIRLKEQGSEMKSGAGLEAESVPMAVIIGVAVGAGVAFLVLMATIVAFCCARSQRNLKGVVSAKNDIRVEIVHKEPSSGREAEDHTTIKQLMMDRGEFQQDSVLKQLEVLKEEEKEFQNLKDPTNGYYSVNTFKEHHSTPTISLSSCQPDLRPTGKQRVPTGMSFTNIYSTLSGQGRLYDYGQRFVLGMGSSSIELCEREFQRGSLSDSSSFLDTQCDSSVSSSGKQDGYVQFDKASKASASSSHHSQSSSQNSDPSRPLQRRMQTHV
Protein: Glycine dehydrogenase (decarboxylating), mitochondrial (EC 1.4.4.2) (Glycine cleavage system P protein) (Glycine decarboxylase) (Glycine dehydrogenase (aminomethyl-transferring)) (Q91W43)
Organism: Mus musculus (Mouse)
Function: The glycine cleavage system catalyzes the degradation of glycine. The P protein (GLDC) binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein (GCSH) (By similarity).
Subcellular location: Mitochondrion {ECO:0000250|UniProtKB:P15505}.
Interaction partners:
- Glycine cleavage system H protein, mitochondrial
- Aminomethyltransferase, mitochondrial
- Serine hydroxymethyltransferase, mitochondrial
- Serine hydroxymethyltransferase, cytosolic
- Sarcosine dehydrogenase, mitochondrial
- Dihydrolipoyl dehydrogenase, mitochondrial
- L-threonine aldolase
- 2-amino-3-ketobutyrate coenzyme A ligase, mitochondrial
- Alanine--glyoxylate aminotransferase
- Trifunctional purine biosynthetic protein adenosine-3
Sequence:
MQLCARAWGLRLGRGAGGGHRLARGTGLSWAQRSRDSSGGGGGGGGGDRGAAGASRLLERLLPRHDDFSRRHIGPGDKDRREMLQALGLASIDELIEKTVPASIRLKRPLKMEDPICENEILETLHAIASKNQIWRSYIGMGYYNCSVPQTILRNLLENSGWVTQYTPYQPEVSQGRLESLLNYQTMVSDITGLDMANASLLDEATAAAEAMQLCHRHNKRKKFFVDPRCHPQTIAVVQTRAKYRGVLVELKLPHEMDFSGKDVCGVLFQYPDTEGKVEDFTELVDRAHQTGSLTCCATDLLALCILRPPGEFGVDIALGNSQRFGVPLGYGGPHAAFFAVKENLVRMMPGRMVGVTRDATGKEVYRLALQTREQHIRRDKATSNICTAQALLANMAAMFAIYHGSQGLKHIAKRVHNATLILSEGLKRAGHQLQHDLFFDTLKVQCGCSVKEVLGRAAQRQINFRLFDDGTLGISLDETVTEKDLDDLLWIFGCESSAELVAEGMGEERRGLLGSSFKRTSPFLTHQVFNSYHSETNLVRYMKKLENKDISLVHSMIPLGSCTMKLNSSSELAPITWREFANIHPFVPLDQAQGYQQLFQGLEKDLCEITGYDRVSFQPNSGAQGEYAGLATIRAYLDQKGERHRTVCLIPKSAHGTNPASAHMAGMKIQPVEVDRYGNIDVAHLKAMVDQHKENLAAIMITYPSTNGVFEENIGDVCALIHQHGGQVYLDGANMNAQVGICRPGDFGSDVSHLNLHKTFCIPHGGGGPGMGPIGVKKHLSPFLPSHPVISIKPTEGTWPVGTVSAAPWGSSSILPISWAYIKMMGGKGLKEATEIAILNANYMAKRLEKHYRVLFRGARGYVAHEFILDTRPFKKSANVEAVDVAKRLQDYGFHAPTMSWPVAGTLMIEPTESEDKAELDRFCDAMISIRQEIADIEEGRIDPRVNPLKMSPHSLTCVTSSCWDRPYSREVAAFPLPFVKPENKFWPTIARIDDIYGDQHLVCTCPPMEVYESPFSEQKRASS
Protein: Protein FATTY ACID EXPORT 5 (At-FAX5) (Q9C6T7)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: May be involved in free fatty acids export.
Subcellular location: Membrane {ECO:0000305}; Multi-pass membrane protein {ECO:0000305}.
Interaction partners:
- At5g57910
- GSH-induced LITAF domain protein
- At3g49350
- Aspartic proteinase 39
- Probable protein phosphatase 2C 33
- Polyadenylate-binding protein RBP45C
- Protein FATTY ACID EXPORT 4, chloroplastic
- CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase
- LS1-like protein
- Vacuolar protein sorting-associated protein
Sequence:
MHDFCFTIPYGILLIVGGFIGYLKKGSIASLAGGAGTGLLVVLAGFISLKAFEKKKTSLLATLLETVIAAALTFVMGQRFLQTQKIMPAALVAGISALMTCFYVYKIATGGNHIPPKAE
Protein: Major capsid protein (Gp11) (A0A6M3VXD3)
Organism: Saccharolobus solfataricus rod-shaped virus 1 (SSRV1)
Function: Self-assembles to form a helical, filamentous nucleocapsid. The capsid proteins wrap around the DNA and maintain it in an A-form by non-specific desolvation and specific coordination of the DNA phosphate groups by positively charged residues. This certainly protects the viral DNA under conditions such as the extreme desiccation of its host.
Subcellular location: Virion {ECO:0000269|PubMed:32759221}.
Interaction partners:
Sequence:
MAKGRTPRSFSQRYGKWNAKFTAFSNPTVASTILTNVAPIAQGNFQTNVPKFTSVNEQVSAVLTQYGVTGPSRAIYQGYGLKVARALNRIGAGPALTNMVAGLKAYYVSAYGANPEILDAVTNIILGSPTGYVS
Protein: Adcyap1b protein (Adenylate cyclase activating polypeptide 1b isoform 1 precursor) (Adenylate cyclase-activating peptide) (Adenylate cyclase-activating polypeptide 1b) (Q98TU3)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Subcellular location: Secreted {ECO:0000256|ARBA:ARBA00004613}.
Interaction partners:
- Vasoactive intestinal peptide receptor 1a
- Vasoactive intestinal peptide receptor 1b
- Vasoactive intestinal peptide receptor 2
- Adenylate cyclase-activating polypeptide 1a
- Growth hormone releasing hormone receptor 2 precursor
- Growth hormone-releasing hormone receptor b
- Transporter
Sequence:
MARSSKATLALIIYGIMMHYSAYCTPIGMTFPKMRLDNDVFDEDGNSLSDLAFGTDQIAIRSPPSLTDDLYTLYYPPEKRTERHADGLLDRALRDILVQLSARKYLHSLMAVRVGGGSSEEDESEPLSKRHSDGIFTDIYSRYRKQMAVKKYLAAVLGRRYRQRVKNKGRRFAYL
Protein: Glypican-2 [Cleaved into: Secreted glypican-2] (Q8BKV1)
Organism: Mus musculus (Mouse)
Function: Cell surface proteoglycan that bears heparan sulfate. May fulfill a function related to the motile behaviors of developing neurons (By similarity).
Subcellular location: Cell membrane {ECO:0000250}; Lipid-anchor, GPI-anchor {ECO:0000250}; Extracellular side {ECO:0000250}.; SUBCELLULAR LOCATION: [Secreted glypican-2]: Secreted, extracellular space {ECO:0000250}.
Interaction partners:
- Syndecan-3
- Glypican-3
- Syndecan-1
Sequence:
MSALRPLLLLLLHLCPGLGPGHGSEAKVVRSCAETRQVLGARGYSLNLIPPSLISGEHLQVCPQEYTCCSSETEQKLIRDAEVTFRGLVEDSGSFLIHTLAARHRKFNEFFREMLSISQHSLAQLFSHSYGRLYSQHAVIFNSLFSGLRDYYEKSGEGLDDTLADFWAQLLERAFPLLHPQYSFPPDFLLCLTRLTSTADGSLQPFGDSPRRLRLQISRALVAARALVQGLETGRNVVSEALKVPVLEGCRQALMRLIGCPLCRGVPSLMPCRGFCLNVAHGCLSSRGLEPEWGGYLDGLLLLAEKLQGPFSFELAAESIGVKISEGLMHLQENSVKVSAKVFQECGTPHPVQSRSRRAPAPREEASRSWRASAEEERPTTAAGTNLHRLVWELRERLSRVRGFWAGLPVTVCGDSRMAADLSQETAPCWTGVGRGRYMSPVVVGSLNEQLHNPELDTSSPDVPTRRRRLHLRAATARMKAAALGQDLDMHDADEDASGSGGGQQYADDWKAGAVPVVPPARPPRPPRPPRRDGLGVRGGSGSARYNQGRSRNLGSSVGLHTPLVLLLLPSALTLLVLR
Protein: Opt5p (Q5A741)
Organism: Candida albicans (strain SC5314 / ATCC MYA-2876) (Yeast)
Subcellular location: Membrane {ECO:0000256|ARBA:ARBA00004141}; Multi-pass membrane protein {ECO:0000256|ARBA:ARBA00004141}.
Interaction partners:
Sequence:
MSTEKPIPALPVTSITSHVDVAAHEVNLQAITSNPLSIGEVGTTLTNGQKDFILKRLHYDSLVSFDKLPPQATFIFEKIEHISIEEALAILEKAVVEHENDVNILDNDEELWTKLINYKQGKIPSDTDFSEKAHPSNFTAKDKLSAFIHEKRVSEETSSLDNSASENLNEPYYKIVDWELQVKLEAVLIAYWSPYPQVRGVTDPYDDPTIPVETVRVYIVAIIWTAIGAVINQFFSERQPSIGLGMSVVQVFLYPTGLICEWILPKWKFKVWKYTIDLNPGPYTFKEQMLATIFCGVSSGTSYVSSNILMQKSELFYDNKWVDFGYQVLLTLSTNFLGFGLSGIMRQFAVYPEKAIWPSILPNVRLNKTLMSPEVKARINGWSISGYNFFFITAGISFLYFWIPDYLFQALSQFNWMTWIKPDNYNLAVVTGSFGGLGLNPIPSFDMNVIGTGGFIAPFYNTLESYIGMVLALFCILGVFYSNYKWTGFLPINSNRLFTNEGKPYHVTAVVNSNSLFDEEKYKEVGPPFYSAGNLVLYGAFFAIYPFHFVYEIAMNYKQMWEALQSLYKGIRNFKRSTYEGFDDPHSVMMRAYPEVPEWAYLIILVISLVLAILCVKLYPAETPVWGIFFALAINFVFLIPLTTVQSRTMFGFGLNVLVELIVGYAIPGNGLALAFIKALGYNIDGQAQNFINDLKQGHYAKLPPRAMYRCQLLSVFITSFIQLGILNYQITGIKDYCVPGNKQKFTCPGTTTFYNASVLWGVIGPKKVFNGLYPILAWCFLIGFLLAFPCIAFKKWAPRKYSKYFEPSIIIGGFLGYAPYNLSYNTGGLYVGYAFMHYVKRKYEAWWQKYDYLLATGIDAGIAFSSIIIFFAVMYHEKDISWWGNNVPFEGWDASMTNGYLNATLQAPDGYFGPRVGHFP
Protein: Kidins220 protein (B2RXL7)
Organism: Mus musculus (Mouse)
Interaction partners:
Sequence:
MIAAEQGNVEIVKELIKNGANCNLEDLDNWTALISASKEGHIHIVEELLKCGANLEHRDMGGWTALMWACYKGRTDVVELLLSHGANPSVTGLYSVYPIIWAAGRGHADIVHLLLQNGAKVNCSDKYGTTPLVWAARKGHLECVKHLLAMGADVDQEGANSMTALIVAVKGGYTQSVKEILKRNPNVNLTDKDGNTALMIASKEGHIEIVQDLLDAGTYVNIPDRSGDTVLIGAVRGGHVEIVRALLQKYADIDIRGQDNKTALYWAVEKGNATMVRDILQCNPDTEICTKDGETPLIKATKMRNIEVVELLLDKGARVSAVDKKGDTPLHVAIRGRSRRLAELLLRNPKDGRLLYRPNKAGETPYNIDCSHQKSILTQIFGARHLSPTETDGDMLGYDLYSSALADILSEPTMQPPICVGLYAQWGSGKSFLLKKLEDEMKTFAGQQIEPLFQFSWLIVFLTLLLCGGLGLVFAFTVDTNLAIAVSLSFLALLYIFFIVIYFGGRQEGESWNWAWALSTRLARHIGYLELLFKLMFVNPPELPEQTTKALPVRFLFTDYNRLSSVGGETSLAEMIATLSDACEREFGFLATRLFRVFKTEDSQGKKKWKKTCCLPSFIIFLFIVGCIIAGITLLAIFRVDPKHLTVNAILISIASIVGLAFVLNCRTWWQVLDSLLNSQRKRLHSAASKLHKLKSEGFMKVLKCEVELMARMAKTIDSFTQNQTRLVVIIDGLDACEQDKVLQMLDTVRVLFSKGPFIAIFASDPHIIIKAINQNLNSVLRDSNINGHDYMRNIVHLPVFLNSRGLSNARKFLVTSATNGDISCSEATGVQEDADRRVSQNSLGEMTKLGSKTALNRRDTYRRRQMQRTITRQMSFDLTKLLVTEDWFSDISPQTMRRLLNIVSVTGRLLRANQITFNWDRLASWINLTEQWPYRTSWLILYLEETEGLPDQMTLKTIYERISKNIPTTKDVEPLLEIDGDIRNFEVFLSSRTPVLVARDVKTFLPCTVNLDPKLREIIADVRAAREQINIGGLAYPPLPLHEAPPRPPSGYSQPASVCSSSASFNGPFPGGVVSPQPHSSYYSGLSGPQHPFYNRASVPATGTSLLLSSMTVDVVCEKLRQIEGLDQGMLPQYCTTIKKANINGRVLAQCNIDELKKEMAMNFGDWHLFRSMVLEMRSVENQVVPEDPRFLNENSSAPVAHGESARRTSHSELPHTELSSQTPYTLNFSFEELNTLGLDEGAPRHSNLSWQSQTRRTPSLSSLNSQDSSIEISKLTDKVQAEYRDAYREYIAQMSQLEGGTGSSTISGRSSPHSTYYIGQSSSGGSIHSNLEQERGKESELKQEEGRKSFLMKRGDVLDYSSSGVSTNEASPLDPITEEDEKSDQSGSKLLPGKKSSERPSLFQTDLKLKGSGLRYQKLPSDEDESGTEESDNTPLLKDDKDKKAEGKAERVAKSPEHSVEPIRTFIKAKEYLSDALLDKKDSSDSGVRSNESSPNHSLHNEAADDSQLEKANLIELEDEGHSGKRGMPHSLSGLQDPVIARMSICSEDKKSPSECSLIASSPEESWPSCQKAYNLNRTPSTVTLNNNTAPTNRANQNFDEIEGVRETSQVILRPGPSPNPTAVQNENLKSMAHKRSQRSSYTRLSKDASELHAASSDSTGFGEERESIL
Protein: Dual specificity mitogen-activated protein kinase kinase 2 (ERK activator kinase 2) (MAPK/ERK kinase 2) (I3L5D4)
Organism: Sus scrofa (Pig)
Interaction partners:
Sequence:
PLQLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELSIGRYPIPPPDAKELEAIFGRPMVDGGDGEPHSISPRPRPPGRPISGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTQDFQEFVNKCLIKNPAERADLKMLMNHTFIKRSEVEEVDFAGWLCKTLRLNQPSTPTRTAV
Protein: 14-3-3 protein zeta/delta (Protein kinase C inhibitor protein 1) (KCIP-1) (SEZ-2) (P63101)
Organism: Mus musculus (Mouse)
Function: Adapter protein implicated in the regulation of a large spectrum of both general and specialized signaling pathways. Binds to a large number of partners, usually by recognition of a phosphoserine or phosphothreonine motif. Binding generally results in the modulation of the activity of the binding partner. Promotes cytosolic retention and inactivation of TFEB transcription factor by binding to phosphorylated TFEB. Induces ARHGEF7 activity on RAC1 as well as lamellipodia and membrane ruffle formation (By similarity). In neurons, regulates spine maturation through the modulation of ARHGEF7 activity (By similarity).
Subcellular location: Cytoplasm {ECO:0000250|UniProtKB:P63104}. Melanosome {ECO:0000250|UniProtKB:P63104}. Note=Located to stage I to stage IV melanosomes. {ECO:0000250|UniProtKB:P63104}.
Interaction partners:
- Serine/threonine-protein kinase B-raf
- 14-3-3 protein epsilon
- M-phase inducer phosphatase 3
- RAF proto-oncogene serine/threonine-protein kinase
- Serine/threonine-protein kinase A-Raf
- Forkhead box protein O3
- 14-3-3 protein beta/alpha
- M-phase inducer phosphatase 2
- Catenin beta-1
- 14-3-3 protein theta
Sequence:
MDKNELVQKAKLAEQAERYDDMAACMKSVTEQGAELSNEERNLLSVAYKNVVGARRSSWRVVSSIEQKTEGAEKKQQMAREYREKIETELRDICNDVLSLLEKFLIPNASQPESKVFYLKMKGDYYRYLAEVAAGDDKKGIVDQSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKTAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDTQGDEAEAGEGGEN