wanglab/gogpt-training-data huggingface dataset:
Protein: Probable histone H2A.1 (HTA10) (Q9C681)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
Subcellular location: Nucleus {ECO:0000250}. Chromosome {ECO:0000250}.
Interaction partners:
- Histone H4
- Histone H2B.6
- Lysine-specific demethylase ELF6
- Histone H2B.1
- Histone H2B.11
- Zinc ion binding / DNA binding protein
- PHD finger family protein / SWIB complex BAF60b domain-containing protein / GYF domain-containing protein
- Histone H2B.10
- Histone H2B.4
- Histone H2B.7
Sequence:
MAGRGKTLGSGSAKKATTRSSKAGLQFPVGRIARFLKKGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKTGASKPSAEDD
Protein: E3 ubiquitin-protein ligase RNF13 (EC 2.3.2.27) (RING finger protein 13) (O43567)
Organism: Homo sapiens (Human)
Function: E3 ubiquitin-protein ligase that regulates cell proliferation. Involved in apoptosis regulation. Mediates ER stress-induced activation of JNK signaling pathway and apoptosis by promoting ERN1 activation and splicing of XBP1 mRNA. Also involved in protein trafficking and localization.
Subcellular location: Endoplasmic reticulum membrane {ECO:0000269|PubMed:18794910, ECO:0000269|PubMed:23378536, ECO:0000269|PubMed:24387786}; Single-pass type I membrane protein {ECO:0000255}. Late endosome membrane {ECO:0000305|PubMed:24387786}; Single-pass type I membrane protein {ECO:0000255}. Lysosome membrane {ECO:0000269|PubMed:17897319}; Single-pass type I membrane protein {ECO:0000255}. Nucleus inner membrane {ECO:0000250|UniProtKB:O54965}; Single-pass type I membrane protein {ECO:0000255}. Note=Under certain conditions, relocalizes to recycling endosomes and to the inner nuclear membrane. {ECO:0000250|UniProtKB:O54965}.
Interaction partners:
- Ubiquitin-conjugating enzyme E2 D2
- Polyubiquitin-B
- Polyubiquitin-C
- Ubiquitin-ribosomal protein eS31 fusion protein
- Ubiquitin-ribosomal protein eL40 fusion protein
- AP-3 complex subunit sigma-1
Sequence:
MLLSIGMLMLSATQVYTILTVQLFAFLNLLPVEADILAYNFENASQTFDDLPARFGYRLPAEGLKGFLINSKPENACEPIVPPPVKDNSSGTFIVLIRRLDCNFDIKVLNAQRAGYKAAIVHNVDSDDLISMGSNDIEVLKKIDIPSVFIGESSANSLKDEFTYEKGGHLILVPEFSLPLEYYLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLRKDQLKKLPVHKFKKGDEYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCKQKVVPSQGDSDSDTDSSQEENEVTEHTPLLRPLASVSAQSFGALSESRSHQNMTESSDYEEDDNEDTDSSDAENEINEHDVVVQLQPNGERDYNIANTV
Protein: Alcohol dehydrogenase 1 (EC 1.1.1.1) (EC 1.1.1.54) (EC 1.1.1.78) (Alcohol dehydrogenase I) (ADHI) (NADH-dependent methylglyoxal reductase) (YADH-1) (P00330)
Organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Function: This isozyme preferentially catalyzes the conversion of primary unbranched alcohols to their corresponding aldehydes. Also shows activity toward secondary alcohols.
Subcellular location: Cytoplasm {ECO:0000269|PubMed:2937632}.
Interaction partners:
- Alcohol dehydrogenase 4
- S-
- Alcohol dehydrogenase 3, mitochondrial
- Alcohol dehydrogenase 5
- Alcohol dehydrogenase 2
- Pyruvate decarboxylase isozyme 1
- Pyruvate decarboxylase isozyme 2
- Fructose-bisphosphate aldolase
- Pyruvate decarboxylase isozyme 3
- Enolase 2
Sequence:
MSIPETQKGVIFYESHGKLEYKDIPVPKPKANELLINVKYSGVCHTDLHAWHGDWPLPVKLPLVGGHEGAGVVVGMGENVKGWKIGDYAGIKWLNGSCMACEYCELGNESNCPHADLSGYTHDGSFQQYATADAVQAAHIPQGTDLAQVAPILCAGITVYKALKSANLMAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRSIGGEVFIDFTKEKDIVGAVLKATDGGAHGVINVSVSEAAIEASTRYVRANGTTVLVGMPAGAKCCSDVFNQVVKSISIVGSYVGNRADTREALDFFARGLVKSPIKVVGLSTLPEIYEKMEKGQIVGRYVVDTSK
Protein: Short coiled-coil protein (Q9UIL1)
Organism: Homo sapiens (Human)
Function: Positive regulator of amino acid starvation-induced autophagy.
Subcellular location: Golgi apparatus membrane {ECO:0000269|PubMed:11303027, ECO:0000269|PubMed:22354037, ECO:0000269|PubMed:24098481}; Peripheral membrane protein {ECO:0000269|PubMed:11303027, ECO:0000269|PubMed:24098481}; Cytoplasmic side {ECO:0000269|PubMed:11303027, ECO:0000269|PubMed:24098481}. Golgi apparatus, trans-Golgi network {ECO:0000269|PubMed:22354037}. Cytoplasm, cytosol {ECO:0000269|PubMed:11303027, ECO:0000269|PubMed:24098481}.
Interaction partners:
- Fasciculation and elongation protein zeta-1
- Fasciculation and elongation protein zeta-2
- ADP-ribosylation factor-like protein 1
- 26S proteasome regulatory subunit 8
Sequence:
MRRRVFSSQDWRASGWDGMGFFSRRTFCGRSGRSCRGQLVQVSRPEVSAGSLLLPAPQAEDHSSRILYPRPKSLLPKMMNADMDAVDAENQVELEEKTRLINQVLELQHTLEDLSARVDAVKEENLKLKSENQVLGQYIENLMSASSVFQTTDTKSKRK
Protein: LP04777p (Midline, isoform A) (Midline, isoform B) (Q9VMR2)
Organism: Drosophila melanogaster (Fruit fly)
Subcellular location: Nucleus {ECO:0000256|ARBA:ARBA00004123, ECO:0000256|PROSITE-ProRule:PRU00201}.
Interaction partners:
- Lateral muscles scarcer, isoform B
- Homeobox protein goosecoid
- Muscle-specific homeobox protein tinman
- Protein groucho
Sequence:
MLVGSHPYLCNGVPAAPAAPNASGQTTTTASKSAAGSATDFSIAAIMAREDASSRESSIRSASPISVEDEVDVDVVDCSDAEEPPTKARRLNHHQHHQHHQHHHNNNNNNNNNNVAHKSRNSGGAVAQTASAESQLNTSSTSSQGRCSTPPQSPGTEDSEERLTPEPVQKAPKIVGSCNCDDLKPVQCHLETKELWDRFHDLGTEMIITKTGRRMFPTVRVSFSGPLRQIQPADRYAVLMDIIPMDSKRYRYAYHRSAWLVAGKADPAPPARLYAHPDSPFSCEALRKQVISFEKVKLTNNEMDKNGQIVLNSMHRYQPRIHLVRLSHGQSIPSNPKELQDLDHKTYVFPETVFTAVTAYQNQLITKLKIDSNPFAKGFRDSSRLTDFDRDPMEALLLEQQLRSPLRLFPDPLMQQFAAQGDPSSMALFEKARQHLQMFGGNSPYAQLMMPQMYQAAAAAAGPPPPPPGLGAFHMFQQQWPQLTAGFLASANQQAAAAQAAAQAQAQAQAAAAAMAANRTPPPPPTASTPSSTSSGSPSPDMRPRQYQRFSPYQLPGGQGPPSSAAGSPPAVNASRSPAH
Protein: RAS p21 protein activator 1 (A0A286YDU0)
Organism: Mus musculus (Mouse)
Interaction partners:
Sequence:
XFFARVASRETPEQAEDWMKGLQAFCSLRKSSPGTSNKRLRQVSSLVLHIEEAHKLPVKHFTNPYCNIYLNSVQVAKTHAREGQNPVWSEEFVFDDLPPDINRFEITLSNKTKKSKDPDILFMRCQLSRLQKGHATDEWFLLSSHIPLKGIEPGSLRVRARYSMEKIMPEEEYSEFKELILQKELHVVYALSHVCGQDRTLLASILLKIFLHEKLESLLLCTLNDREISMEDEATTLFRATTLASTLMEQYMKATATQFVHHALKDSILKIMESKQSCELSPSKLEKNEDVNTNLAHLLSILSELVEKIFMASEILPPTLRYIYGCLQKSVQHKWPTNNTMRTRVVSGFVFLRLICPAILNPRMFNIISDSPSPIAARTLTLVAKSVQNLANLVEFGAKEPYMEGVNPFIKSNKHRMIMFLDELGNVPELPDTTEHSRTDLSRDLAALHEICVAHSDELRTLSNERGVQQHVLKKLLAITELLQQKQNQYTKTNDIR
Protein: Serotransferrin (Beta-1 metal-binding globulin) (Siderophilin) (Q06AH7)
Organism: Homo sapiens (Human)
Subcellular location: Secreted {ECO:0000256|ARBA:ARBA00004613}.
Interaction partners:
Sequence:
MRLAVGALLVCAVLGLCLAVPDKTVRWCAVSEHEATKCQSFRDHMKSVIPSDGPSVACVKKASYLDCIRAIAANEADAVTLDAGLVYDAYLAPNNLKPVVAEFYGSKEDPQTFYYAVAVVKKDSGFQMNQLRGKKSCHTGLGRSAGWNIPIGLLYCDLPEPRKPLEKAVANFFSGSCAPCADGTDFPQLCQLCPGCGCSTLNQYFGYSGAFKCLKDGAGDVAFVKHSTIFENLANKADRDQYELLCLDNTRKPVDEYKDCHLAQVPSHTVVARSIGGKEDLIWELLNQAQEHFGKDKSKEFQLFSSPHGKDLLFKDSAHGFLKVPPRMDAKMYLGYEYVTAIRNLREGTCPEAPTDECKPVKWCALSHHERLKCDEWSVNSVGKIECVSAETTEDCIAKIMNGEADAMSLDGGFVYIAGKCGLVPVLAENYNKSDNCEDTPGAGYFAVAVVKKSASDLTWDNLKGKKSCHTAVGRTAGWNIPMGLLYNKINHCRFDEFFSEGCAPGSKKDSSLCKLCMGSGLNLCEPNNKEGYYGYTGAFRCLVEKGDVAFVKHQTVPQNTGGKNPDPWAKNLNEKDYELLCLDGTRKPVEEYANCHLARAPNHAVVTRKDKEACVHKILRQQQHLFGSNVTDCSGNFCLFRSETKDLLFRDDTVCLAKLHDRNTYEKYLGEEYVKAVGNLRKCSTSSLLEACTFRRP
Protein: Uncharacterized transporter C3B8.04c (O59712)
Organism: Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Subcellular location: Endoplasmic reticulum membrane {ECO:0000269|PubMed:16823372}; Multi-pass membrane protein {ECO:0000269|PubMed:16823372}.
Interaction partners:
- Putative inorganic phosphate transporter C8E4.01c
- Probable metabolite transport protein C1271.09
- Tryptophan synthase
- Acid phosphatase
- Uncharacterized transcriptional regulatory protein C27B12.11c
- Putative inorganic phosphate transporter C1683.01
- Glycerophosphocholine phosphodiesterase gde1
- Uncharacterized RING finger protein C6B12.07c
- Vacuolar transporter chaperone complex subunit 2
- Probable metabolite transporter C2H8.02
Sequence:
MKFSHSLQFNAVPEWSESYIAYSNLKKLIYSLEHEQITLQQGAPDEETRLLEHERRSPDDRFMFALDKELQGIVEFYAPKEKEIADQYGRIKGEFETYENEYMSQGNNINYPTPERLQKSSASRKSGRMARSQELPRITSSNREIYLNGQTSDGGYAAPAISRAESTAIQPSEPHDVDTSKNGLSKKQHSEAQPEVQGNDDEVEEEDDDDDDEDEDEDEDEDNNNNNRWLLIEQYPSDIVAYENFVSLKRKLTQLYVSIHDLISYVHLNYTGFSKILKKYDKTLGSSLRESYMKRVNQAYPFLPATGKTLSKRLNIVAEWYAKLCCQGDTFVAIRRLRGHLREYVAWERNTIWREMMAMERRTQAARLSGLKPVAADEKESEQPPYFTIKTKFGVFRIPRCFFNSTIATLITIIVIFILLLSFPVIDNREQNNCLALLVMVSLLWATEAIPLFVTSFLVPFMTVFLKILRDENGSPLSGKESTKVIFSSMWNPTIVLLLGGFTIAAALSKYHIAKRLATSILAHAGRKPRSVLLTNMFVAMFASMWISNVAAPVLCFSIIQPLLRNLPAESDFAKILIVGIALASNVGGIASPISSPQNIVALQNMDPAAGWGEWFAVSIPVSLLCIFSIWFLLSFGLLKDEHITLAKIRSTKDTFTGVQWFISIVTIGTIVLWCLERRFDEVFGDMGVIALVPIIVFFGTGLLTKEDFNNFLWTVIVLAMGGVALGKVVSSSGLLELIALKIGNAVSSLNTFRVLLIFSALTLVVSSFISHIVAAMVVLPIVHEVGSRLADPHPRLFVLASGMMCSLAMALPTSGFPNMTAIMMENEAGKRYLKVSDFLKAGIPATLISFVILLLIGTPIMRALGF
Protein: receptor protein serine/threonine kinase (EC 2.7.11.30) (O42124)
Organism: Gallus gallus (Chicken)
Subcellular location: Membrane {ECO:0000256|ARBA:ARBA00004479}; Single-pass type I membrane protein {ECO:0000256|ARBA:ARBA00004479}.
Interaction partners:
- Bone morphogenetic protein 4
- Activin receptor type-1
- Growth/differentiation factor 9
- receptor protein serine/threonine kinase
- TGF_BETA_2 domain-containing protein.
- Bone morphogenetic protein 7.
- Bone morphogenetic protein 6.
- Bone morphogenetic protein 10
- BMP5
- Growth differentiation factor 7.
Sequence:
MKSVTKNIFHSLSKAAQSEERLCAFKDPYQQDHGISESRISQENGTILCMKGSTCYGLWEKTREGDIHLVKQGCWSHIGDPQECHFEECIVTTTPSLIQNGTYRFCCCSTDLCNVNFTENFPPPDPTDTTPYNSSHSFHRDETIVIVLASVSVLAVLIAALFFGYRMLAGDRKQGLHSMNMMEAAASEPSLDLDNLKLLELIGRGRYGAVYKGSLDERPVAVKVFSFANRQNFVNERNIYRIPLMEHDNIARFIVGDERFTADGRMEYLLVMEYYPNGSLCKYLSLHTSDWVSSCRLAHSITRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMKLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDCESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQCAEERMAELMMIWERNKSVSPTVNPMSTAMQNERNLSHHRRVSKIRPYPDYSSSSYIEDSIHHTDSIVKNISSEHSMSTTPLTSGEKNRNSINYERQQAQARIPSPETSVTSLSTNTTTTNTTGLTPSTGMTTISEIPYSDETNLHTTNVMQPGGPTPVCLQLTEEDLETNKLDPKEVDKNLKESSDENLMEHSLKQFSGPDPLSSTSSSLLYPLIKLAVEVTGQQDFTQASNGQACLIPDVPSAQVYPLPKQQNLPKRPTSLPLNTKNSTKEPRLKFGGKHKSNLKQVETGVAKMNTINAAEPHVVTVTMNGVAGRTHSINSHAGTTQYANGAVPSGQTASSVAQRAQEMLQNQFSGEDSRLNINSSPDEHEPLLRREQQVGHDEGVLDRLVDRRERQLDNGRTNVNNNNSNPCPVQDTATLSIQNVARNPGQTQTRRAQRPNSLDLSATNSLDSSSMQLGDSSQDGKSGSGEKIKKRVKTPYSLKRWRPSTWVISTEPLHCEVNNNGGDRAVHSKSSTAVYLAEGGTATTMVSKDAGVNCL
Protein: SAGA-associated factor 29 (Coiled-coil domain-containing protein 101) (SAGA complex-associated factor 29) (Q96ES7)
Organism: Homo sapiens (Human)
Function: Chromatin reader component of some histone acetyltransferase (HAT) SAGA-type complexes like the TFTC-HAT, ATAC or STAGA complexes. SGF29 specifically recognizes and binds methylated 'Lys-4' of histone H3 (H3K4me), with a preference for trimethylated form (H3K4me3). In the SAGA-type complexes, SGF29 is required to recruit complexes to H3K4me. Involved in the response to endoplasmic reticulum (ER) stress by recruiting the SAGA complex to H3K4me, thereby promoting histone H3 acetylation and cell survival. Also binds non-histone proteins that are methylated on Lys residues: specifically recognizes and binds CGAS monomethylated on 'Lys-506' (By similarity).
Subcellular location: Nucleus {ECO:0000250|UniProtKB:P0C606}.
Interaction partners:
- Transcription initiation protein SPT3 homolog
- Transcription initiation factor TFIID subunit 12
- Transcription initiation factor TFIID subunit 10
- Transcriptional adapter 3
- Histone acetyltransferase KAT2A
- Transcriptional adapter 2-beta
- Transcription initiation factor TFIID subunit 9
- Transcriptional adapter 2-alpha
- Transformation/transcription domain-associated protein
- Cysteine-rich protein 2-binding protein
Sequence:
MALVSADSRIAELLTELHQLIKQTQEERSRSEHNLVNIQKTHERMQTENKISPYYRTKLRGLYTTAKADAEAECNILRKALDKIAEIKSLLEERRIAAKIAGLYNDSEPPRKTMRRGVLMTLLQQSAMTLPLWIGKPGDKPPPLCGAIPASGDYVARPGDKVAARVKAVDGDEQWILAEVVSYSHATNKYEVDDIDEEGKERHTLSRRRVIPLPQWKANPETDPEALFQKEQLVLALYPQTTCFYRALIHAPPQRPQDDYSVLFEDTSYADGYSPPLNVAQRYVVACKEPKKK
Protein: Protein MKS1 (Protein MAP kinase 4 substrate 1) (VQ motif-containing protein 21) (AtVQ21) (Q8LGD5)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Regulator of plant defense response. May contribute to MPK4-regulated defense activation by coupling the kinase to specific WRKY transcription factors.
Subcellular location: Nucleus {ECO:0000269|PubMed:15990873}.
Interaction partners:
- Probable WRKY transcription factor 33
- Mitogen-activated protein kinase 4
- Probable WRKY transcription factor 25
- Sigma factor binding protein 1, chloroplastic
- Sigma factor binding protein 2, chloroplastic
- VQ motif-containing protein 29
- VQ motif-containing protein 22
- Bifunctional dihydrocamalexate synthase/camalexin synthase
- Mitogen-activated protein kinase 3
- Protein HAIKU1
Sequence:
MDPSEYFAGGNPSDQQNQKRQLQICGPRPSPLSVHKDSHKIKKPPKHPAPPPNRDQPPPYIPREPVVIYAVSPKVVHATASEFMNVVQRLTGISSGVFLESGGGGDVSPAARLASTENASPRGGKEPAARDETVEINTAMEEAAEFGGYAPGILSPSPALLPTASTGIFSPMYHQGGMFSPAIPLGLFSPAGFMSPFRSPGFTSLVASPTFADFFSHIWDQD
Protein: Helix-turn-helix domain-containing protein (O53399)
Organism: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Interaction partners:
Sequence:
MRADVTAEHLTQVVRDIAVIDIDDGVAFNLDTSSVQEIRERADYPGLRVRVAMSVGPWQGIAAWDVSTGEPIAPWPTRVTIDRILGEPITLLGYAPETIIAEKGVTILERGITSTRWRDYVDIVQLDRRGIDDDELLRSARAVAQYRGATLEPVAPHLAGYGAVAQAKWATEHGRCQHCWRHWKPAHVGRRNMDLLDAKQVSEMIGVPVGTLRHWRHSDIGPASFTLGRRVVYRRDEVSRWISKRESATRR
Protein: Candida glabrata strain CBS138 chromosome K complete sequence (Q6FLX7)
Organism: Candida glabrata (strain ATCC 2001 / BCRC 20586 / JCM 3761 / NBRC 0622 / NRRL Y-65 / CBS 138) (Yeast) (Nakaseomyces glabratus)
Subcellular location: Endomembrane system {ECO:0000256|ARBA:ARBA00046278}; Lipid-anchor {ECO:0000256|ARBA:ARBA00046278}; Cytoplasmic side {ECO:0000256|ARBA:ARBA00046278}.
Interaction partners:
- Rab GDP dissociation inhibitor
- Candida glabrata strain CBS138 chromosome D complete sequence
- Candida glabrata strain CBS138 chromosome K complete sequence
- Trafficking protein particle complex subunit BET3
- Trafficking protein particle complex subunit
- Candida glabrata strain CBS138 chromosome C complete sequence
- Candida glabrata strain CBS138 chromosome K complete sequence
- Ras-related protein SEC4
- Candida glabrata strain CBS138 chromosome I complete sequence
- Candida glabrata strain CBS138 chromosome B complete sequence
Sequence:
MNSEYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWDTAGQERFRTITSSYYRGSHGIIIVYDVTDQESFNGVKMWLQEIDRYATSTVLKLLVGNKCDLADKRVVEYDVAKEFAEANKMPFLETSALDSTNVEEAFLTMARQIKESMTQQNMNESQQKKNDKGNVNLKGQSLTQSGSSCC
Protein: Interleukin-13 (B3GDZ5)
Organism: Sus scrofa (Pig)
Subcellular location: Secreted {ECO:0000256|ARBA:ARBA00004613}.
Interaction partners:
Sequence:
MALWLTLVIALTCFGGLASPGPVPPHSTALKELIEELVNITQNQKTPLCNGSMVWSVNLTTSMYCAALESLINISDCSAIQKTQRMLSALCSHKPPSEQVPGKHIRDTKIEVAQFVKDLLKHLRMIFRHG
Protein: DNA replication licensing factor MCM2 (EC 3.6.4.12) (Q9XXI9)
Organism: Caenorhabditis elegans
Subcellular location: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
Interaction partners:
- DNA replication licensing factor MCM3
- Origin recognition complex subunit 1
- Cell division control protein
- DNA replication licensing factor MCM7
- DNA replication licensing factor mcm-5
- CDT1 Geminin-binding domain-containing protein
- DNA replication licensing factor mcm-4
- Origin recognition complex subunit 2
- DNA replication licensing factor mcm-6
- ORC
Sequence:
MADRANNDDDVDRQPLPIADDADDDVDGIDEMFNNEDEDPEDEEGENLFGDDMERDYREQPELDQYSESGMDDASDVGSLSVSARRAAEREMAQRDQLLDDDALMYEDGDSEEVDTRRRGRGRRGRGDAADDDSVPMEEEDIPVDILENIRGRTIRDHVSDEAVAKEIERRFKNFLRSFHEPGNKQTKYIQMIKSMAADNRESLEVSFTDLSDDNGEQNISYFLPEAPNEMLAIMDRAATEVVMNMYPFYSRVCNEIKVRISQLPVEEDIRMLRQVHLNMLIRTAGVVTIASGILPQLAVVKYDCVACGYLLGPFVQQNDEEVRPTICPSCQGKGPFELNVENTVYHNYQRITMQESPNKVAAGRLPRSKDVILLGDLCDSCKPGDEIEVTGVYTNNFDGSLNYKQGFPVFNTLIHANHITNKDKMASDQLTDEDIKAIRELSQDPNISQRVFSSIAPSIYGHDDVKRAIALALFRGEAKNPGAKHRLRGDINVLLCGDPGTAKSQFLRYAAHIAPRSVLTTGQGASAVGLTAYVQRHPVTREWTLEAGAMVLADKGVCLIDEFDKMSDQDRTSIHEAMEQQSISISKAGIVTSLHARCTVIAASNPIGGRYNPTRTFAENVDLTEPILSRFDVLCVIRDSVDSVEDERLAKFVVGNHRTHHPDAKKIVKEGDELEEDQMDERTGVRLIPQDLLRKYIIYAREKCHPTLPEQHSEKFSNIFAQMRKESMATGSVAITVRHVESMIRLSEAHAKLHLRSYVNDEDCAAAIRVMLESFVNTQKASIMRMMKKTFSRHLTENRSANELLLFILKQLIRQQMHYATARAAAGTILQSVTIPESEFIEKAQQLRIENVKPFYTSEIFASNNFLYDPSKKTIVQEIF
Protein: SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 (K7EQF0)
Organism: Homo sapiens (Human)
Subcellular location: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
Interaction partners:
Sequence:
EEDEVPDDETVNQMIARHEEEFDLFMRMDLDRRREEARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYSDSLTEKQWLKAIEEGTLEEIEEEVRQKKSSRKRKRDSDAGSSTPTTSTRSRDKDDESKKQKKRGRPPAEKLSPNPPNLTKKMKKIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDDSEGEESEEEEEGEEEGSESESRSVKVKIKLGRKEKAQDRLKGGRRRPSRGSRAKPVVSDDDSEEEQEEAS
Protein: Ras-related protein RabR (Q86JP5)
Organism: Dictyostelium discoideum (Social amoeba)
Subcellular location: Cell membrane {ECO:0000305}; Lipid-anchor {ECO:0000305}; Cytoplasmic side {ECO:0000305}.
Interaction partners:
Sequence:
MTTTTLLSESTNNSNNTNNNTNNNTNNTMNNNNNNNNNNTIGNNNNNNPEYDILINILMLGDEEVGKGSVARRYTEGYFPINENLYNIEVDRKHKDIKDWGDGLIKRKDPNKPVIGRLQLWNFHMHKISDIPTKQQYRETNGFILFFDVTNKSSFLQLSSLIELVRAKCADENNNFNCQSNSRNSTNYNRHSVGNHCPNSPQKGEKENNTHSSTAPPAPPPLPPIVIVGNKCDDVSNTVVDPIAAKKYCDSLSIPLLFISAKTNENVNEAFNILQGLIIKQMKIKERERQKLLKQKHIKKDVNCNLM
Protein: Solute carrier family 35 member C2 (Ovarian cancer-overexpressed gene 1 protein) (Q9NQQ7)
Organism: Homo sapiens (Human)
Function: May play an important role in the cellular response to tissue hypoxia. May be either a GDP-fucose transporter that competes with SLC35C1 for GDP-fucose, or a factor that otherwise enhances the fucosylation of Notch and is required for optimal Notch signaling in mammalian cells.
Subcellular location: Golgi apparatus, cis-Golgi network membrane {ECO:0000269|PubMed:20837470}; Multi-pass membrane protein {ECO:0000255}. Endoplasmic reticulum-Golgi intermediate compartment membrane {ECO:0000269|PubMed:20837470}; Multi-pass membrane protein {ECO:0000255}.
Interaction partners:
- Collagen alpha-1
- GDP-fucose transporter 1
- Nucleotide sugar transporter SLC35B4
Sequence:
MGRWALDVAFLWKAVLTLGLVLLYYCFSIGITFYNKWLTKSFHFPLFMTMLHLAVIFLFSALSRALVQCSSHRARVVLSWADYLRRVAPTALATALDVGLSNWSFLYVTVSLYTMTKSSAVLFILIFSLIFKLEELRAALVLVVLLIAGGLFMFTYKSTQFNVEGFALVLGASFIGGIRWTLTQMLLQKAELGLQNPIDTMFHLQPLMFLGLFPLFAVFEGLHLSTSEKIFRFQDTGLLLRVLGSLFLGGILAFGLGFSEFLLVSRTSSLTLSIAGIFKEVCTLLLAAHLLGDQISLLNWLGFALCLSGISLHVALKALHSRGDGGPKALKGLGSSPDLELLLRSSQREEGDNEEEEYFVAQGQQ
Protein: Soluble starch synthase 3a, chloroplastic/amyloplastic (EC 2.4.1.21) (Protein FLOURY ENDOSPERM 5) (Soluble starch synthase IIIa) (OsSSIIIa) (A0A0P0XCU3)
Organism: Oryza sativa subsp. japonica (Rice)
Function: Involved in starch synthesis in endosperm amyloplasts. Plays an important role in the elongation of amylopectin B chains.
Subcellular location: Plastid, chloroplast {ECO:0000305}. Plastid, amyloplast {ECO:0000305}. Note=Amyloplast or chloroplast, soluble. {ECO:0000305}.
Interaction partners:
- ornithine carbamoyltransferase
- 1,4-alpha-glucan-branching enzyme, chloroplastic/amyloplastic
- Alpha-1,4 glucan phosphorylase
- Alpha-1,4 glucan phosphorylase
- Isoamylase 1, chloroplastic
- Glucose-1-phosphate adenylyltransferase large subunit 1, chloroplastic/amyloplastic
- Glucose-1-phosphate adenylyltransferase small subunit 1, chloroplastic/amyloplastic
- 4-alpha-glucanotransferase DPE1, chloroplastic/amyloplastic
- 1,4-alpha-glucan branching enzyme
- Glucose-1-phosphate adenylyltransferase large subunit 4, chloroplastic/amyloplastic
Sequence:
MEMALRPQSLLCPRSRLKVVIRPASSASGGGLAQYFLMTRRYTGSRIVRCMVSSSDCPNRKAKRTISLHTEVASSRGYAPRIAAESSIQEREHINSDEETFDTYNRLLRNESTEWKKLDTTEVDLSQDVSSSSMRKVDATDEAKLDILEDDLPRNLLNGVTMGEVDMLDEAGAEDDVFEVDLSALHNSTVGKMDAVNEVGTENDLFEVDLSALHSAAVGKVDVVDGAKAKEDLFEMDSLALHSVTMGKVDAINAAGAEGDKFEVDLSALASNNSMIEAVNVMDEAKAIEDTLEVDLSGNATSSSTYGEVKFEVDSLGNTSSTVMYGPADGAYEPRSDEVTFKVDSSENASNNVMYGRADVVDESWADEGIFEVDFFTNASSGAEYGKVDVVDEAKTDDFTFEIDSLEKDSNNKMHGKAHMVDEAWDDEAIFEVDLFGNASSIPIYGEVNVLDEARADDGKFEVDLLGNTSSNSTHEEVDVVDEAQTGEATFEVDLLGNALSSAIYKEVPVMGGAQDDEVDVDFSINASITETEKEADAVDEARVEDETFDMDLVGKQISIDSMNDDVVEEGTKHHRYPMLSSAFIEVKTIHETPVSLKPELMSVVMDQEQDKPISSVYQQEGSIFNLHAENQSTVDFHEREQMAITFDKQKESVAKLSKEDQQTAGLPEQNMSFDGVHRKSQSIIGLPFQHQSIVSSPEKYRSIVGFHGQNQSIISSHKQDKSIVGVPKKIQSIVGSTKHDDSIVGFRKQDRSIVSVPEQKQSIVGFHKQDLSIVAVSEQNLSIVAIPRESQSKQISIVRRHDPLHLKEVETKDRDGISKKSGGDDDLPHMLFEEELSQVEDVARAIAYKKQHEVDVISLTPDIQESPQDNIDPQELRRMLQELADQNCSMGNKLFVFPEAVKANSTIDVYLNRNLSALANEPDVHIKGAFNSWRWRPFTERLHKSELSGDWWSCKLHIPKEAYRLDFVFFNGRLVYDNNDSNDFVLQVESTMDEDSFEEFLVEEKKRELERVATEEAERRRHAEEQQRMGEQRAAEQAAREQAKKEIELKKNKLQNLLSSARTHVDNLWHIEPSTYRQGDTVRLYYNRNSRPLMHSTEIWMHGGCNSWTDGLSIVERLVECDDENGDWWYANVHIPEKAFVLDWVFADGPPGNARNYDNNGRQDFHAILPNAMTNEEYWVEEENCIYTRLLHEIREREEAIKIKVEKRAKMKSEMKEKTMRMFLLSQKHIVYTEPLEIRAGTTVDVLYNPSNTVLNGKPEVWFRWSFNRWMHPSGVLPPKKMVKTEDGCHLKATVSVPSDAYMMDFVFSESEEGGIYDNRNGTDYHIPVSGSNAKEPPIHIVHIAVEMAPIAKVGGLADVVTSLSRAIQELGHHVEVILPKYNFMNQSNVKNLHVRQSFSLGGTEIKVWFGLVEDLSVYFLEPQNGMFGGGWVYGGNDAGRFGLFCQSALEFLLQSGSSPHIIHCHDWSSAPVAWLYKEHYAESRLATARIIFTIHNLEFGAHFIGKAMTYCDKATTVSHTYSKEVAGHGAIAPHRGKFYGILNGIDPDIWDPYTDNFIPMHYTSENVVEGKNAAKRALQQRFGLQQTDVPIVGIITRLTAQKGIHLIKHALHRTLERNGQVVLLGSAPDPRIQSDFCRLADSLHGENHGRVRLCLTYDEPLSHLIYAGSDFILVPSIFEPCGLTQLVAMRYGSIPIVRKTGGLYDTVFDVDHDKDRARVLGLEPNGFSFDGADCNGVDYALNRQQSLLGLKPAVGSTPSAKGSWSKTGPGTGLPWTTLNCTIQLTNFEAPIQRWQEKASIGRYYKLNETWLKVKIFYLSCRYKLTQTWFKVKIFYLSYTYICRIKTLYSMHKQLWEYVSAMFPILSFNYEYLI
Protein: Endoplasmic reticulum chaperone BiP (EC 3.6.4.10) (Immunoglobulin heavy chain-binding protein homolog) (G8BEU5)
Organism: Candida parapsilosis (strain CDC 317 / ATCC MYA-4646) (Yeast) (Monilia parapsilosis)
Interaction partners:
- protein disulfide-isomerase
- RanBD1 domain-containing protein
- Uncharacterized protein
- Uncharacterized protein
- Nucleoporin NSP1-like C-terminal domain-containing protein
- non-chaperonin molecular chaperone ATPase
- non-specific serine/threonine protein kinase
- Thioredoxin domain-containing protein
- Derlin
- Calnexin
Sequence:
MRSNSWFPRLGLLYVALVVLIPFLASSKHSFALAASSDEDAHENYGTVIGIDLGTTYSCVGVMKNGKVEILANDQGNRITPSYVAFNGDERLVGDAAKNQAASNVNNTVFDIKRLIGLKYNDDTVQKELKHMPYKIENKGNRPVVSVEYNGEQKVFTPEEISGMILGKMKSIAEEYLGKKVTHAVVTVPAYFNDAQRQATKDAGTIAGLNVLRIVNEPTAAAIAYGLDKTNEEKQIIVYDLGGGTFDVSLLSIEGGVFEVLATAGDTHLGGEDFDHKIVRYLAKQFKKKHNIDVSSNAKAISKLKREAEKAKRTLSSQMSTRVEIDSFVDGIDFSETLSRAKFEELNMASFRKTLKPVEQVLKDGNVKKSDIDDIVLVGGSTRIPKVQELLEQFFDGKKASKGINPDEAVAYGAAVQAGVLSGEEGVDDIVLLDVNPLTLGIETSGGVMTTLIRRNTAIPTKKSQIFSTAADNQPTVLIQVYEGERTMAKDNNRLGKFELTGIPPAPRGVPQIEVTFSLDANGILKVEAADKGTGKSESITITNEKGRLSKEDIDRMVEEAEKYAQQDQELKEKIEARNSLENYAHLLKGQLSDKSETGLGSKLEEDDRETLDDAIKETLEFIEDNFDTATAEEFEEQKQKLIDVANPITAKLYGGAGGAAPGGEGDAKFGDDDSDDDIDHDEL