wanglab/gogpt-training-data huggingface dataset:
Protein: Cytosolic carboxypeptidase Nna1 (EC 3.4.17.-) (Nervous system nuclear protein induced by axotomy protein 1 homolog) (Q9VY99)
Organism: Drosophila melanogaster (Fruit fly)
Function: Metallocarboxypeptidase.
Subcellular location: Mitochondrion {ECO:0000269|PubMed:20620870}.
Interaction partners:
Sequence:
MAEREREAMSASLSRLLRTLSSASMSRRHCPLALLQPIPLHQSEIALGSASSGGSAERCCSSCSDDSNNNERCKSAERGTAADEVGEEGREEVELESKEDAVEGEQDELELKRDSSTVNVNVVRANFKCNDMECSLVLGDYVNGFLGSFLSKGLKTNQLVVNTDEKTLRPVARLKEPRDLFALPKDKDNDCSQQAPRWPVECQVIEERIIHIPYVPAVPEPLNAPTGNELKPRPVGEENGIVVFSYSPISAVNYEKPKAKKEDDESSDESDYSSDSRQDSTPPSRSTPMRLAGGGECAPGKLNSVSKMINNVDNRSTSASLDDNDDYYDDEYDTSGGYCGGSGEAKEKAIIKDLIEAKKKRYQEEAEVTPVGGGTARNSRAASRSEASKDASDIDDIWKNNTSEYKPASPRYVLSQFGKNVTKAVIDRIVDHEDLVPPSGSQKVSNQFAVGPVKLPKTNIARLEVAFERSACQDRSKSRLKKKMSSSRRRRESTSDEDSSSSSLGNEEDEEVDDSDSDAENTGSGIGLRRILGSYSARLAGGAEKCPCPGSGSVSDTETLVGDESRSRLAGSNGLHQQDVVCSRNRQAQSRSPLRSVPHTHAATVAAAAAALARGRNRDKDGCLGGKDEKNMGMGVGTTGTSSMGTRTSSPVRNNVFRLSKDQHILLNSMTSQETTGTLISSTSTNQTTTTTNSSQSFLCSDLPQAQFSRSAVGGARFMTNCHPMNPEEYDGLEFESRFESGNLAKAVQITPTYYELYLRPDLYTSRSKQWFYFRVRRTRRKMLYRFSIVNLVKSDSLYNDGMQPVMYSTLGAKEKSEGWRRCGDNICYYRNDDESASSSANEDDEDNSTYTLTFTIEFEHDDDTVFFAHSYPYTYSDLQDYLMEIQRHPVKSKFCKLRLLCRTLAGNNVYYLTVTAPSSNEENMRRKKSIVVSARVHPSETPASWMMKGLMDFITGDTTVAKRLRHKFIFKLVPMLNPDGVIVGNTRNSLTGKDLNRQYRTVIRETYPSIWYTKAMIRRLIEECGVAMYCDMHAHSRKHNIFIYGCENKRNPEKKLTEQVFPLMLHKNSADRFSFESCKFKIQRSKEGTGRIVVWMLGITNSYTIEASFGGSSLGSRKGTHFNTQDYEHMGRAFCETLLDYCDENPNKVKRHAKLFKQIKKIRKREKREQKALKLQKMADQGCIMNDKLKVKRSVEKSVS
Protein: Testis-expressed protein 13A (Q9BXU3)
Organism: Homo sapiens (Human)
Interaction partners:
- CCR4-NOT transcription complex subunit 7
- Protein BTG3
- CCR4-NOT transcription complex subunit 3
- CCR4-NOT transcription complex subunit 2
Sequence:
MALRPEDPSSGFRHSNVVAFINEKMARHTKGPEFYLENISLSWEKVEDKLRAILEDSEVPSEVKEACTWGSLALGVRFAHRQAQLQRHRVRWLHGFAKLHKSAAQALASDLKKLREQQETERKEAASRLRMAQTSLVEVQKERDKELVSPHEWEQGAGWPGLATAGGVCTEGAAEEEEEAAVAAAGAAGGKGAEEEQRDVEVVAAPVEAMAPPVEAGAAPMETQFPHVEARAASMETTEKLERILLQLLGDADQEKYTYWGQKEGDLRSVETATSYFSGTTNPWSRASSEPLPVQLPASYSYSYSSPFSSFSDIPTISPPQATVTAPVPPQLPSDWEAFDTSLWSDGGPHRIDHQEHPRDRRYSEPHQQRPPVYRRPGDWDCPWCNAVNFSRRDTCFDCGKGIWLQKPH
Protein: SD04095p (Q86P79)
Organism: Drosophila melanogaster (Fruit fly)
Subcellular location: Membrane {ECO:0000256|ARBA:ARBA00004167}; Single-pass membrane protein {ECO:0000256|ARBA:ARBA00004167}.
Interaction partners:
Sequence:
SKAHPVLEEFSTYTVIRPQVEHGRTKRSLLTTLDATDGLHTPQISLSYTHEGKRVVVDLQRNDLLLPNSHFLRYQNASRGATPGHVVTTFTKTEVDLCHYQGHIRGKPESVVALSTCDGALDGIVIDGRQTYFIHPHIDGRGRLQDDHYLLKQADMHPTNATCGYDNHRDDHSHDYEKADGDNGLGGGIPSLPLRLDGGEFSRTLLRKRRQADDSSQLIRPYNANKYSSYVELVIVVDNKVYKNFQENTKKVHQYCKGIANIINALYVPLNIFVALVGVVIWNESNEIEFSSDGDLTLRNFLNYRSTKLVLDHPNDNAQLLTKENFAGGVVGKALKGPICTYEYSGGVSMQHSPNPAMVATTMAHEMGHNFGMEHDTSDCHCRDEKCVMAASSTSFIPVNWSSCSIDQLTIAFSRGMNYCLRNKPERLFESPTCGNGFVEPGEQCDCGLPEHCENACCNAQTCMLHSKNATCATGECCDLTTCRPKLAGSACREAENECDLPEYCTGESEYCPADVFRRDTEPCDGGQAYCFHGTCRSHSNQCRTLWGPTGDNSEHCYNKNTEGTRLGNCGYNRLNKTFLRCEEQHVNCGMLHCIHLNERLEFGMESAAVLSHSYISHDRKIVACRTALVDLGLQTTDPGLTPNGAKCGVDKMCVDQRCLPVDAVRQKGMGKPCPEDCNGNGICNSRGHCHCDVGFGGESCSKAGSGGSPDSGPATDPNGSVGFKRFLYVLFFFVLPVVALFWFLYHCYKNGMLTRGKLADNMYVSTSSFSIGSKEDTSPDSSISTTLAHKQTPARTAPPPLPLHTNRQLSGIVTNTAPATITNIHAILPRHKSNPDVVHQLNIPPPSVPKSHSTHEVRPKAATLKPLTLLHSTHSTSNNNNTESLNQNDKSNTNNSTLRRKLDITAPRLNATTNPLALTEGAQFIQSDPARCAKN
Protein: Coumarin 8-geranyltransferase 1b, chloroplastic (EC 2.5.1.138) (Prenyltransferase 1b) (ClPT1ba) (A0A077K9K6)
Organism: Citrus limon (Lemon) (Citrus medica var. limon)
Function: Prenyltransferase specific for geranyl diphosphate as prenyl donor and coumarin as prenyl acceptor. Can use umbelliferone and esculetin as substrates, and with a lower activity, 5,7-dihydroxy-coumarin and 5-methoxy-7-hydroxycoumarin. No activity with 5-hydroxy-7-methoxycoumarin, bergaptol, xanthotoxol, p-coumaric acid, caffeic acid, 2,4-dihydroxycinnamic acid, kaempferol, genistein or homogentisate. No activity with dimethylallyl diphosphate, farnesyl diphosphate or geranylgeranyl diphosphate as prenyl donors.
Subcellular location: Plastid, chloroplast membrane {ECO:0000250|UniProtKB:A0A077K8G3}; Multi-pass membrane protein {ECO:0000255}.
Interaction partners:
Sequence:
MLQMHSNSSFSPKCYYPLQHAGCVKTLQLPLTKVHGGLNRSESKNYAIKCTQSDSFYSTNKIRNNENSSSRNCKPFNKYRVAVTLQQQDCASNNEDDINSTSFRDVLLKKLHALYVFTRPFAMIGTIVGITSIAILPLQSFADLTPKYFMEFLKALLSAVLMNNYVGTVNQVADVEIDKVNKPGLPLASGDLSVGTGLAITLILSLTSLAIALSLQSPPLIFGLIVWFLLGTAYSVDLPFLRWKTNPFLAGMCMVIVFGLVYQFSFFIHFQKYVLGRPVVITRPLIFAAAIISTISAVMSLLKDIPDEDGDKQFGYQSISSKLGKENVLRLCVYALFFAYGVAVIVGASSSFQLGKLVSIIGHSTLAFLLWLRAQTVDLSNNASTYSFYMFIWKLFYAEYLLIHFLR
Protein: Noelin-2 (Olfactomedin-2) (O95897)
Organism: Homo sapiens (Human)
Function: Involved in transforming growth factor beta (TGF-beta)-induced smooth muscle differentiation. TGF-beta induces expression and translocation of OLFM2 to the nucleus where it binds to SRF, causing its dissociation from the transcriptional repressor HEY2/HERP1 and facilitating binding of SRF to target genes. Plays a role in AMPAR complex organization (By similarity). Is a regulator of vascular smooth-muscle cell (SMC) phenotypic switching, that acts by promoting RUNX2 and inhibiting MYOCD binding to SRF. SMC phenotypic switching is the process through which vascular SMCs undergo transition between a quiescent contractile phenotype and a proliferative synthetic phenotype in response to pathological stimuli. SMC phenotypic plasticity is essential for vascular development and remodeling (By similarity).
Subcellular location: Secreted {ECO:0000269|PubMed:21228389}. Synapse {ECO:0000250|UniProtKB:Q8BM13}. Membrane {ECO:0000250|UniProtKB:Q8BM13}. Nucleus {ECO:0000269|PubMed:25298399}. Cytoplasm {ECO:0000269|PubMed:25298399}. Note=Nuclear localization is induced by TGF-beta. {ECO:0000269|PubMed:25298399}.
Interaction partners:
- Glutamate receptor 1
- Glutamate receptor 4
- Protein cornichon homolog 2
- Protein cornichon homolog 3
- Glutamate receptor 3
- Glutamate receptor 2
- Voltage-dependent calcium channel gamma-7 subunit
- Glutamate receptor ionotropic, NMDA 1
- Voltage-dependent calcium channel gamma-5 subunit
- Voltage-dependent calcium channel gamma-8 subunit
Sequence:
MWPLTVPPPLLLLLCSGLAGQTLFQNPEEGWQLYTSAQAPDGKCICTAVIPAQSTCSRDGRSRELRQLMEKVQNVSQSMEVLELRTYRDLQYVRGMETLMRSLDARLRAADGSLSAKSFQELKDRMTELLPLSSVLEQYKADTRTIVRLREEVRNLSGSLAAIQEEMGAYGYEDLQQRVMALEARLHACAQKLGCGKLTGVSNPITVRAMGSRFGSWMTDTMAPSADSRVWYMDGYYKGRRVLEFRTLGDFIKGQNFIQHLLPQPWAGTGHVVYNGSLFYNKYQSNVVVKYHFRSRSVLVQRSLPGAGYNNTFPYSWGGFSDMDFMVDESGLWAVYTTNQNAGNIVVSRLDPHTLEVMRSWDTGYPKRSAGEAFMICGVLYVTNSHLAGAKVYFAYFTNTSSYEYTDVPFHNQYSHISMLDYNPRERALYTWNNGHQVLYNVTLFHVISTSGDP
Protein: Intraflagellar transport protein 27 homolog (Putative GTP-binding protein RAY-like) (Rab-like protein 4) (Q9D0P8)
Organism: Mus musculus (Mouse)
Function: Small GTPase-like component of the intraflagellar transport (IFT) complex B that promotes the exit of the BBSome complex from cilia via its interaction with ARL6. Not involved in entry of the BBSome complex into cilium. Prevents aggregation of GTP-free ARL6. Required for hedgehog signaling. Forms a subcomplex within the IFT complex B with IFT25 (By similarity). Its role in intraflagellar transport is mainly seen in tissues rich in ciliated cells such as kidney and testis. Essential for male fertility, spermiogenesis and sperm flagella formation. Plays a role in the early development of the kidney. May be involved in the regulation of ureteric bud initiation.
Subcellular location: Cell projection, cilium {ECO:0000269|PubMed:19253336}. Cytoplasm {ECO:0000269|PubMed:28964737}. Cell projection, cilium, flagellum {ECO:0000269|PubMed:28964737}. Note=Localizes to the sperm flagellum. {ECO:0000269|PubMed:28964737}.
Interaction partners:
- Intraflagellar transport protein 46 homolog
- Intraflagellar transport protein 22 homolog
- Intraflagellar transport protein 74 homolog
- Intraflagellar transport protein 81 homolog
- Intraflagellar transport protein 25 homolog
- Intraflagellar transport protein 52 homolog
- Intraflagellar transport protein 88 homolog
- Intraflagellar transport protein 57 homolog
- TRAF3-interacting protein 1
- Intraflagellar transport protein 20 homolog
Sequence:
MVKLAAKCILAGDPAVGKTALVQMFRSDGTHFQKNYTLTTGVDLVVKTVPVLDTNDSVELFIFDSAGKELFSEMLDKLWENPNVLCLVYDVTNEQSFISCTKWLEKVRSQTSGISLPGVLVGTKTDLAGRQTVDSAQAQVWALSQGLEFFETSVKEMDNYEAPFHCLAKQFYQLYREKVDIFHTLV
Protein: ATP-sensitive inward rectifier potassium channel 14 (Potassium inwardly rectifying channel subfamily J member 14) (F1R7M8)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Subcellular location: Membrane {ECO:0000256|ARBA:ARBA00004141, ECO:0000256|RuleBase:RU003822}; Multi-pass membrane protein {ECO:0000256|ARBA:ARBA00004141, ECO:0000256|RuleBase:RU003822}.
Interaction partners:
- Ankyrin repeat domain 33Aa.
- Ankyrin repeat domain 33Ab
- Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2
- WD repeat domain 17
- Transmembrane protein 68.
- Coiled-coil domain-containing 126
- Potassium voltage-gated channel, Shab-related subfamily, member 2
- Si:dkey-192j17.1
Sequence:
MGAARVKRRFSAVVDTPLDEEEVMRLAQSDDGTSSHSGTLPSPNCNGKVLSILHSNGGRSGERDEDEDDDDADKDDDDEEEGGGRRGGGGRGSALSGESGVEGRWERNKRASLPSLSPTPLRDRRRQSRRPRRRFVGKDGRCNVTFVNMSERGQRYLTDLFTTCVDIRWRWMLVVFTLSFLLTWLLFGFTFWLIAAAHGDLNPLASSSSSPSSLSSSLAPLDATEGSSRVEMVAETEEPCFQQVNSFMAAFLFSLETQTSIGYGFRSVTEACPLAVLAVVLQCIVGCIIDAFIIGAVMAKIAKPKKRNETLVFSDVAVVAVRDGKLCMMWRVGNLRKSHLVEAHVRAQLLKPRVTPEGEFLPLDNSDLNVGFDTGTDRIFLVSPVTIVHEINEESPFFEMDKGALEGDKDLEVVVILEGMVEATAMTTQCRSSFLASEILWGHRFEPVLFERKNCYQVDYSYFNRTYEVTDTPTCSAKELAEKKYIARSRSSFCYENEVALQLSSSVPPCADQFSPSPCSSPPQSPTPPPRQDSCSEHPHKH
Protein: Carboxypeptidase A5 (EC 3.4.17.-) (Q8R4H4)
Organism: Mus musculus (Mouse)
Subcellular location: Secreted {ECO:0000250}.
Interaction partners:
Sequence:
MQGTQRGGLVPGLSPLDRRTLLFCNFILAVAWGQVNFTGDQVLRVLAKNEKQLSLLRDLETQKPQKVDFWRGPARPSLPVDMRVPFSELPSVKAYLKSHGLAYSIMIKDIQVLLDEERDAMAKSRRLERSTNSFSYSSYHTLDEIYSWIDNFVAEHSNLVSKIHIGKSFENRSILVLKFSTGGPNRPAIWIDTGIHSREWITHATGIWISQKIVNAYGKDHVLKRILNTMDIFIEIVTNPDGFAFTHSMNRLWRKNKSSQPGIFCIGVDLNRNWKAGFGGNGSNKNPCSETYRGPAPESEPEVAAIVDFITGHGNFKAMISIHSYSQMVMYPYGHSLEPVPNHEELFNLAKDAVKALNKVHGIQYIFGSISTTLYSASGISVDWAYDSGIKYAFSFELRDTGQYGFLLPASQIVPTAEETWMALQTIMKHTLNHPY
Protein: NAD-dependent protein deacylase SRT2 (EC 2.3.1.286) (Regulatory protein SIR2 homolog 2) (Q94AQ6)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: NAD-dependent protein deacylase. Catalyzes the NAD-dependent hydrolysis of acyl groups from lysine residues (By similarity). Involved in responses to ethylene leading to the transcriptional repression of some ethylene-responsive genes via the regulation of histone acetylation H3K9Ac. Negatively regulates plant basal defense against plant pathogens, possibly by suppressing salicylic acid biosynthesis.
Subcellular location: Mitochondrion matrix {ECO:0000255|HAMAP-Rule:MF_03161}. Nucleus {ECO:0000269|PubMed:20573705}.
Interaction partners:
- NAD-dependent protein deacetylase SRT1
- Glutamine-dependent NAD
- Nicotinamide/nicotinic acid mononucleotide adenylyltransferase
- Histone deacetylase 14, chloroplastic
- NAD kinase 2, chloroplastic
- NAD
- Uridine nucleosidase 1
- Histone deacetylase 2
- Histone H4
- Nudix hydrolase 19, chloroplastic
Sequence:
MNMRRVFGGVSTDLFPSRSMYRPLQSGGNLVMLFKGCRRFVRTTCRVSIPGGSLGNESKAPPRFLRDRKIVPDADPPNMEDIHKLYRLFEQSSRLTILTGAGVSTECGIPDYRSPNGAYSSGFKPITHQEFTRSSRARRRYWARSYAGWRRFTAAQPGPAHTALASLEKAGRINFMITQNVDRLHHRAGSDPLELHGTVYTVMCLECGFSFPRDLFQDQLKAINPKWAEAIESIDHGDPGSEKSFGMKQRPDGDIEIDEKFWEEGFHIPVCEKCKGVLKPDVIFFGDNIPKERATQAMEVAKQSDAFLVLGSSLMTMSAFRLCRAAHEAGAMTAIVNIGETRADDIVPLKINARVGEILHRVLDVGSLSVPAL
Protein: Gap junction gamma-2 protein (Connexin-47) (Cx47) (Gap junction alpha-12 protein) (Q8BQU6)
Organism: Mus musculus (Mouse)
Function: One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell. May play a role in myelination in central and peripheral nervous systems.
Subcellular location: Cell membrane {ECO:0000269|PubMed:15183511}; Multi-pass membrane protein {ECO:0000269|PubMed:15183511}. Cell junction, gap junction {ECO:0000269|PubMed:15183511}.
Interaction partners:
- Gap junction beta-2 protein
- Gap junction beta-1 protein
Sequence:
MTNMSWSFLTRLLEEIHNHSTFVGKVWLTVLVVFRIVLTAVGGESIYSDEQSKFTCNTRQPGCDNVCYDAFAPLSHVRFWVFQIVVISTPSVMYLGYAVHRLARASEQERRRALRRRPGTRRLPRAQLPPPPPGWPDTTDLGEAEPILALEEDEDEEPGAPEGPGEDTEEERAEDVAAKGGGGDGKTVVTPGPAGQHDGRRRIQREGLMRVYVAQLVVRAAFEVAFLVGQYLLYGFEVPPFFACSRQPCPHVVDCFVSRPTEKTVFLLVMYVVSCLCLLLNLCEMAHLGLGSAQDAVRGRRGASAAGPGPTPRPPPCAFPAAAAGLACPPDYSLVVRAAERARAHDQNLANLALQALRDGAAVAAVSADRDSPPCAGLNATSRGAPRVGGLASGTGSATSGGTVGEQSRPGAQEQLATKPRAGSEKGSTGSRDGKATVWI
Protein: Rho GTPase-activating protein 33 (Rho-type GTPase-activating protein 33) (Sorting nexin-26) (Tc10/CDC42 GTPase-activating protein) (O14559)
Organism: Homo sapiens (Human)
Function: May be involved in several stages of intracellular trafficking. Could play an important role in the regulation of glucose transport by insulin. May act as a downstream effector of RHOQ/TC10 in the regulation of insulin-stimulated glucose transport (By similarity).
Interaction partners:
Sequence:
MVARSTDSLDGPGEGSVQPLPTAGGPSVKGKPGKRLSAPRGPFPRLADCAHFHYENVDFGHIQLLLSPDREGPSLSGENELVFGVQVTCQGRSWPVLRSYDDFRSLDAHLHRCIFDRRFSCLPELPPPPEGARAAQMLVPLLLQYLETLSGLVDSNLNCGPVLTWMELDNHGRRLLLSEEASLNIPAVAAAHVIKRYTAQAPDELSFEVGDIVSVIDMPPTEDRSWWRGKRGFQVGFFPSECVELFTERPGPGLKADADGPPCGIPAPQGISSLTSAVPRPRGKLAGLLRTFMRSRPSRQRLRQRGILRQRVFGCDLGEHLSNSGQDVPQVLRCCSEFIEAHGVVDGIYRLSGVSSNIQRLRHEFDSERIPELSGPAFLQDIHSVSSLCKLYFRELPNPLLTYQLYGKFSEAMSVPGEEERLVRVHDVIQQLPPPHYRTLEYLLRHLARMARHSANTSMHARNLAIVWAPNLLRSMELESVGMGGAAAFREVRVQSVVVEFLLTHVDVLFSDTFTSAGLDPAGRCLLPRPKSLAGSCPSTRLLTLEEAQARTQGRLGTPTEPTTPKAPASPAERRKGERGEKQRKPGGSSWKTFFALGRGPSVPRKKPLPWLGGTRAPPQPSGSRPDTVTLRSAKSEESLSSQASGAGLQRLHRLRRPHSSSDAFPVGPAPAGSCESLSSSSSSESSSSESSSSSSESSAAGLGALSGSPSHRTSAWLDDGDELDFSPPRCLEGLRGLDFDPLTFRCSSPTPGDPAPPASPAPPAPASAFPPRVTPQAISPRGPTSPASPAALDISEPLAVSVPPAVLELLGAGGAPASATPTPALSPGRSLRPHLIPLLLRGAEAPLTDACQQEMCSKLRGAQGPLGPDMESPLPPPPLSLLRPGGAPPPPPKNPARLMALALAERAQQVAEQQSQQECGGTPPASQSPFHRSLSLEVGGEPLGTSGSGPPPNSLAHPGAWVPGPPPYLPRQQSDGSLLRSQRPMGTSRRGLRGPAQVSAQLRAGGGGRDAPEAAAQSPCSVPSQVPTPGFFSPAPRECLPPFLGVPKPGLYPLGPPSFQPSSPAPVWRSSLGPPAPLDRGENLYYEIGASEGSPYSGPTRSWSPFRSMPPDRLNASYGMLGQSPPLHRSPDFLLSYPPAPSCFPPDHLGYSAPQHPARRPTPPEPLYVNLALGPRGPSPASSSSSSPPAHPRSRSDPGPPVPRLPQKQRAPWGPRTPHRVPGPWGPPEPLLLYRAAPPAYGRGGELHRGSLYRNGGQRGEGAGPPPPYPTPSWSLHSEGQTRSYC
Protein: Ubiquitin-activating enzyme E1 1 (AtUBA1) (EC 6.2.1.45) (Protein MODIFIER OF SNC1 5) (P93028)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Activates ubiquitin by first adenylating its C-terminal glycine residue with ATP, and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding a ubiquitin-E1 thioester and free AMP.
Interaction partners:
- Ubiquitin-conjugating enzyme E2 7
- Ubiquitin-conjugating enzyme E2 27
- Ubiquitin-conjugating enzyme E2 1
- E3 ubiquitin-protein ligase UPL3
- Ubiquitin-ribosomal protein eS31y fusion protein
- Ubiquitin-conjugating enzyme E2 3
- Ubiquitin-conjugating enzyme E2 2
- E3 ubiquitin-protein ligase UPL4
- Ubiquitin-conjugating enzyme E2 14
- Ubiquitin-ribosomal protein eL40y fusion protein
Sequence:
MLHKRASEANDKNDNTIIGSDLASSKKRRIDFTESSSDKSSSILASGSSRGFHGDSVVQQIDMAFGNSNRQEIDEDLHSRQLAVYGRETMRRLFASNVLISGMHGLGAEIAKNLILAGVKSVTLHDERVVELWDLSSNFVFSEDDVGKNRADASVQKLQDLNNAVVVSSLTKSLNKEDLSGFQVVVFSDISMERAIEFDDYCHSHQPPIAFVKADVRGLFGSVFCDFGPEFAVLDVDGEEPHTGIIASISNENQAFISCVDDERLEFEDGDLVVFSEVEGMTELNDGKPRKIKSTRPYSFTLDEDTTNYGTYVKGGIVTQVKQPKLLNFKPLREALKDPGDFLFSDFSKFDRPPLLHLAFQALDHFKAEAGRFPVAGSEEDAQKLISIATAINTGQGDLKVENVDQKLLRHFSFGAKAVLNPMAAMFGGIVGQEVVKACSGKFHPLFQFFYFDSVESLPSEPVDSSDFAPRNSRYDAQISVFGAKFQKKLEDAKVFTVGSGALGCEFLKNLALMGVSCGSQGKLTVTDDDIIEKSNLSRQFLFRDWNIGQAKSTVAASAAAVINPRFNIEALQNRVGAETENVFDDAFWENLTVVVNALDNVNARLYVDSRCLYFQKPLLESGTLGTKCNTQSVIPHLTENYGASRDPPEKQAPMCTVHSFPHNIDHCLTWARSEFEGLLEKTPAEVNAYLSSPVEYTNSMMSAGDAQARDTLERIVECLEKEKCETFQDCLTWARLRFEDYFVNRVKQLIYTFPEDAATSTGAPFWSAPKRFPRPLQYSSSDPSLLNFITATAILRAETFGIPIPEWTKNPKEAAEAVDRVIVPDFEPRQDAKIVTDEKATTLTTASVDDAAVIDDLIAKIDQCRHNLSPDFRMKPIQFEKDDDTNYHMDVIAGLANMRARNYSIPEVDKLKAKFIAGRIIPAIATSTAMATGLVCLELYKVLDGGHKVEAYRNTFANLALPLFSMAEPLPPKVVKHRDMAWTVWDRWVLKGNPTLREVLQWLEDKGLSAYSISCGSCLLFNSMFTRHKERMDKKVVDLARDVAKVELPPYRNHLDVVVACEDEDDNDVDIPLVSIYFR
Protein: Nucleic-acid-binding protein from transposon X-element (Q9NBX5)
Organism: Drosophila melanogaster (Fruit fly)
Function: Strongly basic protein that binds directly to retroviral RNA and may be involved in its packaging and in the reverse transcription process.
Subcellular location: Virion {ECO:0000305}.
Interaction partners:
Sequence:
MNTLNETAAADESLDTAFLSSPQCAAPQRFQKIKRKSRASPETERKKPKSTIGKQGENPSATEPRYGGNSNRFGLLAHLTADKQVGNEIGDLYDQPSTSHQAAIAAAKRDAASAGTTSSAKRAQSKPPPIVMEGVDDVYLMMQSIENIVDLEKIEARASMSGVLRLYAADANTFRTIVNWLEIEEYEFHCYQLKEDRPYRVCVKGLHHSTLHHQIKDELEKIGHKVLDIHTPLRRNEPGTSKASPVNMFFLNIAAAANNKEILAVKALCHMRVVIEPLRKRNAIVQCHRCQQIGHTAKYCRKAHICVKCAGEHPAKDCTRPRIELCTCYNCGGQHPANYKGCSKLQAFLQRSRPRSGVAGRTEVSDRPTPRGLAGGKEIPSSRGGISYADVARGSIHHKQPMSLTHQQQKQKQQPYDGSPSRQRSRSRTRASRGTLQRSTDASSSIEAILQTLNENINSLRSIQEKQMELMMMMMKQQQQQSHQQGQIINLLTALQARQAP
Protein: Flotillin-like protein 2 (Nodulin-like protein 2) (Q4V3D6)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: May act as a scaffolding protein within caveolar membranes, functionally participating in formation of caveolae or caveolae-like vesicles.
Subcellular location: Cell membrane {ECO:0000305}; Lipid-anchor {ECO:0000305}. Membrane, caveola {ECO:0000250}.
Interaction partners:
- Hypersensitive-induced response protein 4
- Hypersensitive-induced response protein 2
- SPFH/Band 7/PHB domain-containing membrane-associated protein family
- At5g06330
- Putative germin-like protein subfamily 1 member 9
- Nuclear transcription factor Y subunit A-1
- Thiohydroximate-O-sulfate sulfur/sulfate-lyase
Sequence:
MFKVARASQYLAITGGGIEDIKLSKKSWVFPWQRCTVFDVSPVNYTFKVQAMSAEKLPFVLPAVFTIGPRVDDTEALILYARLISPHDKQSNHVNELVEGVIEGETRVLAASMTMEEIFKGTKEFKKEVFDKVQLELDQFGLVIYNANVKQLVDVPGHEYFSYLGQKTQMEAANQARIDVAEAKMKGEIGAKERTGLTLQNAAKIDAESKIISMQRQGEGTKAEIKVKTEVKVFENQKEADVAKANSELAMKKAAWTKDAKVAEVEATKAVALREAELQTQVEKMNALTRTEKLKAEFLSKASVEYETKVQEANWELYNKQKQAEAVLYEKQKQAEAQKAEADATFYSKQKEAEGLVALASAQGTYLRTLLDAVQNDYSCLRDFLMINNGTYQEIAKTNALAVRDLQPKISVWNHGGEQGIGGASGSGMKDIAGLYKMLPPVLDTVYEQTGMQPPAWIGTLSK
Protein: Rifin (Q8IIZ1)
Organism: Plasmodium falciparum (isolate 3D7)
Interaction partners:
Sequence:
MKLHYTKILLFSLQLNILMLSSYAHIKKKIYITPQIPITTSRVLSECDVQTSIYDYDEDMKSVKDNFDRQTSHRFEEYEKRMNVKRQKCKEQCDKEVQKIILKDKIEKELTVKFGALHTHITIEDIPTCICDKSLSDKVEKTCLNCGGILGTVVPGWGILGSIGFYGFVNSIAIDVAVKEGIAKVLHELKEITALEILLNNKLEALVTPETYACTNALNKSIMAAKLTICKASPQPAPCSPKLFDLSVIAPKVHNATMEGINTAKAAEVNTWNTAFSSPAFFSNPIVISAIVLICIAVILLIIYLILRYRRKKQMNKKLKYIKLLKE
Protein: tRNA-modifying protein YgfZ (P0ADE8)
Organism: Escherichia coli (strain K12)
Function: Folate-binding protein involved in regulating the level of ATP-DnaA and in the modification of some tRNAs. It is probably a key factor in regulatory networks that act via tRNA modification, such as initiation of chromosomal replication.
Subcellular location: Cytoplasm {ECO:0000305}.
Interaction partners:
- tRNA-2-methylthio-N
- Probable Fe
Sequence:
MAFTPFPPRQPTASARLPLTLMTLDDWALATITGADSEKYMQGQVTADVSQMAEDQHLLAAHCDAKGKMWSNLRLFRDGDGFAWIERRSVREPQLTELKKYAVFSKVTIAPDDERVLLGVAGFQARAALANLFSELPSKEKQVVKEGATTLLWFEHPAERFLIVTDEATANMLTDKLRGEAELNNSQQWLALNIEAGFPVIDAANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLAGSASRLPEAGEDLELKMGENWRRTGTVLAAVKLEDGQVVVQVVMNNDMEPDSIFRVRDDANTLHIEPLPYSLEE
Protein: Nucleoporin NUP192 (Nuclear pore protein NUP192) (P47054)
Organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Function: Functions as a component of the nuclear pore complex (NPC). NPC components, collectively referred to as nucleoporins (NUPs), can play the role of both NPC structural components and of docking or interaction partners for transiently associated nuclear transport factors. NUP192 is located to the NPC core at the nuclear membrane and is essential for de novo assembly of NPCs.
Subcellular location: Nucleus, nuclear pore complex {ECO:0000269|PubMed:10684247}. Note=Cytoplasmic and nucleoplasmic side of the nuclear pore complex in the nuclear envelope (symmetric distribution).
Interaction partners:
- Nucleoporin NUP170
- Nucleoporin NUP133
- Nucleoporin NUP157
- Nucleoporin NUP85
- Nucleoporin NUP57
- Nucleoporin NUP188
- Nucleoporin NSP1
- Nucleoporin NIC96
- Nucleoporin NUP159
- Nucleoporin SEH1
Sequence:
MKWSAIPFQTLYRSIESGEFDFDLFKEVLPDLQNLNLNTDKLKNNASRSQLEKGEIELSDGSTFKVNQEFIFEAISLSDELNLDEIVACELILSGDTTANNGKVQYFLRRQYILQIVSFIVNCFHEDTELYQELIKNGALVSNILSAFKFIHTQLSEIKQQINKAQILENYNALFQQNIKFRRDFLLREYDILSQILYGLVDKGAIMKNKDFILSLLHHVSELDSNDFFIIYYTPAFFHLFASLRVLPDADVKLLHSQFMKDLKDDSIYTKPVKVALIFIFFAYFIGWCKEDPKRRADTMDFKTDVDEPMTSAVELGAIEQILIFAADTSIVEQDKSMELFYDIRSLLERHIPRLIPKQLLDDEKIFSQTTNSTYNPASATDNMSGRGLWNPSYPGMMSTTGTARLNSMPNNVNEYSYTTIVLSDQTQEFFLSSFDDVLQTIITDCAFLLTKIKDAEEDSLLSGEDLTLDDISLKADLERFFLSIYFFYASRPEYSCTFWSDKESNAYGFIEWCSRCNDNLMRSCFYLMVSSLSFGPENALNVYHYFGENSSISWKNIAQCLSDYTKKISNFNSSLHKRQQFSESTHNDIDSTAVALEEGLNEEAVIFLSSLLTLVGSVTYQVDEDVKSSLSKVFSDVLFEFTKINTPLVGAAFKVISNLVPKLESSRTKFWSFLDSLIFKDSSLNYSSESYRNAFTNVLTKYSDVLGFLQLFHNLISIHSRENNSEYMVFGKLAFPTRLGQGYRKVGIWPYFDYIFNDILAHVDQIVDIRNKRAVQLPILKIIYTGLCSFDYSVILNSIPAAANLDALVDCENFFNYVQECPAIPIFNYIFTEKIYKSIFNVVDVGVDQLSIELEGGKNQAELLQLAVKIINKVLDYQETYVEELFPIVKKHGKTDYFLPKNYSLHGLRSFYDAIFFNIPLVAHLGLYVGVDDQILATNSLRILAKLSERSNGSVASLSKRNKLLTIFDSVDESARIKDAFITQLESSITDAGVLALKLELLDFLTSNLSNYSRTMTISHLLLGFQVSNVISLGPNLATFISSGTSLLDSLISVLEASLNSITKDNIDYAPMRLATAALEIILKLCRNPLTSGLLYSYLIKENFFERIMILDPQVTRFTTWNGSPFDNSTEEKCKNFIESESVGAFLSFLAYRNYWTQYLGLFIHKISFSGTKSEVLTYVNYLISNTMYSVRLFSFLDPLNYGNICEPKETLSIFTNVPLNLEQVTLNKYCSGNIYDFHKMENLMRLIKRVRAESLHSNSFSLTVSKEQFLKDADVECIKAKSHFTNIISRNKALELNLSVLHSWVQLVQIIVTDGKLEPSTRSNFILEVFGTIIPKISDYIEFNITFSEELVSLAVFLFDIYNRDRKLITDKGTVDGRLYQLFKTCIQGINSPLSSVALRSDFYILANHYLSRVLSDQVGSEKVLQDLRLGSKKLVEIIWNDVVYGEGTSRVTGILLLDSLIQLANRSKENFILDSLMKTTRLLLIIRSLKNTDALLNSTTEHINIDDLLYELTAFKATVFFLIRVAETRGGASALIENNLFRIIAELSFLKVDPDLGLDLMFDEVYVQNSKFLKVNVTLDNPLLVDKDANGVSLFELIVPIFQLISAVLVSMGSSNKAVVQTVKGLLNTYKRLVIGIFKRDLLREKEDKKNSSDPNNQSLNEMVKLIVMLCTLTGYQNND
Protein: SnoaL-like domain-containing protein (Q38C80)
Organism: Trypanosoma brucei brucei (strain 927/4 GUTat10.1)
Interaction partners:
Sequence:
MSYSLRKLRLLVDDPNGELATNLATAKLFCAAEDDGESEELGSLMGPEVHYANFWGVVRGQVAALAVMRKEHSALRLSWSTQVTVITPNTFERQGFAHFTSGGMAAIPLVGSWFTKFSQRRVRESLVVRDGRVVFRDLSFQWGLGVH
Protein: Protein brown (EC 7.6.2.-) (EC 7.6.2.6) (ATP-binding cassette transporter sub-family G member brown) (Broad substrate specificity ATP-binding cassette transporter brown) (P12428)
Organism: Drosophila melanogaster (Fruit fly)
Function: ATP-dependent transporter of the ATP-binding cassette (ABC) family which transports various molecules including bioamines, neurotransmitters and metabolic intermediates. In the eye and probably in association with w/white, required for the transport of the eye red pigment precursor, guanine, into pigment cell granules. In Malpighian tubules, involved in guanine uptake. Probably in association with w/white, involved in aging-induced intestinal stem cell proliferation in the midgut by regulating tetrahydrofolate transport.
Subcellular location: Membrane {ECO:0000255}; Multi-pass membrane protein {ECO:0000255}.
Interaction partners:
- FI03229p
- LD11139p
Sequence:
MQESGGSSGQGGPSLCLEWKQLNYYVPDQEQSNYSFWNECRKKRELRILQDASGHMKTGDLIAILGGSGAGKTTLLAAISQRLRGNLTGDVVLNGMAMERHQMTRISSFLPQFEINVKTFTAYEHLYFMSHFKMHRRTTKAEKRQRVADLLLAVGLRDAAHTRIQQLSGGERKRLSLAEELITDPIFLFCDEPTTGLDSFSAYSVIKTLRHLCTRRRIAKHSLNQVYGEDSFETPSGESSASGSGSKSIEMEVVAESHESLLQTMRELPALGVLSNSPNGTHKKAAICSIHQPTSDIFELFTHIILMDGGRIVYQGRTEQAAKFFTDLGYELPLNCNPADFYLKTLADKEGKENAGAVLRAKYEHETDGLYSGSWLLARSYSGDYLKHVQNFKKIRWIYQVYLLMVRFMTEDLRNIRSGLIAFGFFMITAVTLSLMYSGIGGLTQRTVQDVGGSIFMLSNEMIFTFSYGVTYIFPAALPIIRREVGEGTYSLSAYYVALVLSFVPVAFFKGYVFLSVIYASIYYTRGFLLYLSMGFLMSLSAVAAVGYGVFLSSLFESDKMASECAAPFDLIFLIFGGTYMNVDTVPGLKYLSLFFYSNEALMYKFWIDIDNIDCPVNEDHPCIKTGVEVLQQGSYRNADYTYWLDCFSLVVVAVIFHIVSFGLVRRYIHRSGYY