wanglab/gogpt-training-data huggingface dataset:
Protein: Radial spoke head 10 homolog B (E9PYQ0)
Organism: Mus musculus (Mouse)
Subcellular location: Cytoplasm, cytoskeleton, cilium axoneme {ECO:0000269|PubMed:34871179}. Cell projection, cilium {ECO:0000250|UniProtKB:P0C881}. Cell projection, cilium, flagellum {ECO:0000250|UniProtKB:P0C881}.
Interaction partners:
- Ankyrin repeat domain-containing protein 61
- Radial spoke head protein 3 homolog B
Sequence:
MVKEKKKADKKGDKSARSPSSISDNPEASKQDSNASKQEVAPSAVVPVVETPLKQAPKRDSVQMEQSEEETQYEEPILTKLIVESYEGEKVRGLYEGEGFAVFQGGNTYHGMFSEGLMHGQGTYIWADGLKYEGDFVKNIPMNHGVYTWPDGSTYEGEVTNGMRNGFGMFKCGTQPVSYIGHWCHGKRHGKGSIYYNQEGTSWYEGDWVYNIKKGWGIRCYKSGNIYEGQWENNMRHGEGRMRWLTTNEEYTGHWEKGIQNGFGTHTWFLKRIPNSQYPLRNEYIGEFVNGFRHGQGKFYYASGAMYEGEWASNKKQGRGRMTFKNGHVYEGLFSNDHIAQFFETEMDYSQSLDRWSDASQRSRQPRGSSVSAVREPETLRKLDGSESRSVLGTSIELDLTLLLDMYPEESQEEEKKQVEYAVLRNITELRRIYCFYSGLGCDHSLDNTFLMTKLHFWRFLKDCRFHHHNITLADMDRVLSVYNGIPIEEIHSPFRTILLRTFLNYLLQLAYYIHHKEFQNRSPSLFLCFTKLMSENIHPHACQVKGHLFSEQQRTLYSMNYIDKCWEIYTAYCRPNEAPPYELTMKMRYFLWMLKDFRMINKDLTATKFMTVIAEDNPFVYDGTDSNFELELVFLEFFEALLCFSLCCMFDQMTRSYLKVPYDDITTNRYGSTQTILNQSIHRSPSAITSHDSEVHFSSTKSSLDKIGALPDGKIRQSEPKLKKSLSEDKVSKMNFKTQGRGLVFMSPQGEKYEKPKDEQKEKLNIWVNNLYVFFVSVLFSAYKREEMLKEKVKENQLQEAELAQQRQIENEELEARLNILREEEARKQDFELDITVLKEPSEIPASQPLTPSPPKEDLASIQTSKASPGKKKKK
Protein: Argonaute-like protein (Q389P5)
Organism: Trypanosoma brucei brucei (strain 927/4 GUTat10.1)
Interaction partners:
- ATP-dependent DEAD/H RNA helicase
- Probable eukaryotic initiation factor 4A
- Uncharacterized protein
- RNase III domain-containing protein
- Importin N-terminal domain-containing protein
- Importin N-terminal domain-containing protein
- Poly
Sequence:
MSDWERGYRGGRGGGEGGRRGGRGGGEGGRRGGRGGGEGGYRGGRGGGEGGYRGGRGGGEGGYRGGRGGGFGDGAYRTGQTRERDAVVSFAKAGMYDRPVEAWTNLLPLYIDPRKCAFIYPLSIEMKDGAPDLRERVKVLASKNMLLKMRKESGSEDAFDVNMCVCTGSSIICPTRLPVEEYNYELTVNARKGKGKTVTYTYTLTLKQATSCSLNPKERTMELNCVIGSAVQECYEEKVGTKFVDLKNGKKNATGTISIFEAVSVKAFSTVIRGKENDVLQLDVSLPVASAMDCLTAMEDERRRARGSIRRALAERFIKKKVYSVVDKSRATMYTVLDITDNKACDAAGLKQNPSQTYVEYFRDRYGIHIEPQQALFKCRTNDGRRVVLVPPQVLHEMSLNEQDRRQLPQLCSIFPDDRVQRLRRVIERLIQHEGGRVVKFLEAYGISFGKDFVSVDGQVLKSPEILIPKGDGFRRVNPQSESSQQGFVKELKDLRHPGARQTVDVVLYDETNNKQGTVVVGNIKKYLDGMSAPLNFGDSIPVRSLKEAKGRLGKNIFGVTFLRRPEREPYAEWKASWSGGGALSQVVAKDLTGGRELSIVMAVAQQICAKTGRLNWTLDVNQVCPKLAKADPSGGILIIAADVGRDQRSVATESSAVRQEFFAVAFVSFYVKGTQWSTYCNHYQVNGRKETLYADGSDCDTTSMSEGGPPTPSEVISKKMGEFVQEAKSHFTSKGNAVSAYLVLRGCASEGELLDARKSDVDVLSEVLKGSSWAVVAGQRYQHSRFAFQAPDDRTMYCNAPRGFVTAEGADKKFGEAFFLTGANCTLGHARSTLYVVSKRKGFDLGELQALLYGMCFLYPNKTDALPLPLPLKCAAEYGRKYSALTNLKTLGGNLRTTMHYL
Protein: ARF guanine-nucleotide exchange factor GNL2 (Protein GNOM-like 2) (F4K2K3)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Activates the ARF proteins by exchanging bound GDP for free GTP. Plays a role in vesicular protein sorting. Essential for pollen germination.
Subcellular location: Cytoplasm, cytosol. Membrane; Peripheral membrane protein; Cytoplasmic side. Note=Soluble and partially membrane-bound.
Interaction partners:
- Coatomer subunit gamma
- ADP-ribosylation factor
- Probable ADP-ribosylation factor At2g15310
- ADP-ribosylation factor 2-B
- ADP-ribosylation factor GTPase-activating protein AGD7
- ADP-ribosylation factor 1
- ADP-ribosylation factor
- Structural molecule
- Golgin candidate 6
- ADP-ribosylation factor
Sequence:
MDRIAVRAKRKELGISCMLNTEVGAVLAVIRRPLSESYLSPQETDHCDSSVQQSLKSLRALIFNPQQDWRTIDPSVYLSPFLEVIQSDEIPASATAVALSSILKILKIEIFDEKTPGAKDAMNSIVSGITSCRLEKTDLVSEDAVMMRILQVLTGIMKHPSSELLEDQAVCTIVNTCFQVVQQSTGRGDLLQRNGRYTMHELIQIIFSRLPDFEVRGDEGGEDSESDTDEIDMSGGYGIRCCIDIFHFLCSLLNVVEVVENLEGTNVHTADEDVQIFALVLINSAIELSGDAIGQHPKLLRMVQDDLFHHLIHYGASSSPLVLSMICSCILNIYHFLRKFMRLQLEAFFSFVLLRVTAFTGFLPLQEVALEGLINFCRQPAFIVEAYVNYDCDPMCRNIFEETGKVLCRHTFPTSGPLTSIQIQAFEGLVILIHNIADNMDREEDEGNEEDDNNSNVIKPSPVEIHEYIPFWIDKPKEDFETWVDHIRVRKAQKRKLAIAANHFNRDEKKGLEYLKYNYLVSDPLDPMALASFFRFTPGLDKTMIGDYLGDPDELHLSVLRSFTHTFEFTGMNLDTALRTFLESFRLPGESQKIERMIEAFSERFYDQQSSDIFASKDTVHILCYSLIMLNTDQHNPQVRRKMTEDEFIRNNRAINAGNDLPKEYLSELFQSIATNAFALSTHSGPVEMNPNRWIELMNRTKTTQPFSLCQFDRRIGRDMFATIAGPSIAAVSAFFEHSDDDEVLHECVDAMISIARVAQYGLEDILDELIASFCKFTTLLNPYTTPEETLFAFSHDMKPRMATLAVFTLANTFGDSIRGGWRNIVDCLLKLRKLQLLPQSVIEFEINEENGGSESDMNNVSSQDTKFNRRQGSSLMGRFSHFLALDNVEESVALGMSEFEQNLKVIKQCRIGQIFSKSSVLPDVAVLNLGRSLIYAAAGKGQKFSTAIEEEETVKFCWDLIITIALSNVHRFNMFWPSYHEYLLNVANFPLFSPIPFVEKGLPGLFRVCIKILASNLQDHLPEELIFRSLTIMWKIDKEIIETCYDTITEFVSKIIIDYSANLHTNIGWKSVLQLLSLCGRHPETKEQAVDALIGLMSFNASHLSQSSYAYCIDCAFSFVALRNSSVEKNLKILDLMADSVTMLVKWYKTASTDTANSYSPASNTSSSSSMEENNLRGVNFVHHLFLKLSEAFRKTTLARREEIRNRAVTSLEKSFTMGHEDLGFTPSGCIYCIDHVIFPTIDDLHEKLLDYSRRENAEREMRSMEGTLKIAMKVLMNVFLVYLEQIVESAEFRTFWLGVLRRMDTCMKADLGEYGDNKLQEVVPELLTTMIGTMKEKEILVQKEDDDLWEITYIQIQWIAPALKDELFPDEEI
Protein: Large ribosomal subunit protein eL14 (60S ribosomal protein L14) (CAG-ISL 7) (P50914)
Organism: Homo sapiens (Human)
Function: Component of the large ribosomal subunit. The ribosome is a large ribonucleoprotein complex responsible for the synthesis of proteins in the cell.
Subcellular location: Cytoplasm {ECO:0000269|PubMed:23636399}.
Interaction partners:
- Small ribosomal subunit protein eS27
- Large ribosomal subunit protein eL28
- Large ribosomal subunit protein uL3
- Large ribosomal subunit protein eL31
- Large ribosomal subunit protein eL37
- Large ribosomal subunit protein eL33
- Small ribosomal subunit protein uS17
- Large ribosomal subunit protein eL21
- Small ribosomal subunit protein uS14
- Large ribosomal subunit protein eL20
Sequence:
MVFRRFVEVGRVAYVSFGPHAGKLVAIVDVIDQNRALVDGPCTQVRRQAMPFKCMQLTDFILKFPHSAHQKYVRQAWQKADINTKWAATRWAKKIEARERKAKMTDFDRFKVMKAKKMRNRIIKNEVKKLQKAALLKASPKKAPGTKGTAAAAAAAAAAKVPAKKITAASKKAPAQKVPAQKATGQKAAPAPKAQKGQKAPAQKAPAPKASGKKA
Protein: Pre-mRNA-splicing factor of RES complex (Q387M1)
Organism: Trypanosoma brucei brucei (strain 927/4 GUTat10.1)
Interaction partners:
Sequence:
MFFLNLVSFPFPSHLLLHYKGGMKRLRRFDSDSDDDDADGYVEEPLLRYTRDDKDEMLWAMGLRTEEPDVESNGAGSSSGCGETVEGFVTDVCDGQMRESYQGASNVRPPAVATRRRHAALREDRDVPDHWKGLMSEELLQVYFTTLSYAESGHSLDDKLLAQYLPYSEERFRPVVRADERIWENSYCIKPGWRWDGVVRGVSTTN
Protein: Thioredoxin domain-containing protein (Q54N76)
Organism: Dictyostelium discoideum (Social amoeba)
Interaction partners:
- Thioredoxin domain-containing protein
- Ubiquitin-related modifier 1 homolog
- Glutathione reductase
Sequence:
MSVKSVIKVGEKVPMDVTLGKALPPVDGVCAMAPKVLSGELFKDRKVVLFAVPGAFTPTCSAKHLPGFIEKSEEIKKKGISEIFCIATNDPFVMSAWGKDVNAGTAVTLLSDGNSEFTKKIGLEMDGKAFLLGEDRSQRYAMILDSGVVKHLAVEEGGKFDVSSAEAILKQL
Protein: Dehydrogenase/reductase SDR family member 1 (EC 1.1.1.-) (Short chain dehydrogenase/reductase family 19C member 1) (Protein SDR19C1) (Q99L04)
Organism: Mus musculus (Mouse)
Function: NADPH-dependent oxidoreductase which catalyzes the reduction of some steroids (estrone, androstene-3,17-dione and cortisone) as well as prostaglandin E1, isatin and xenobiotics in vitro. May have a role in steroid and/or xenobiotic metabolism.
Subcellular location: Endoplasmic reticulum {ECO:0000250|UniProtKB:Q96LJ7}. Note=May be attached to the ER membrane by its C-terminus segment. {ECO:0000250|UniProtKB:Q96LJ7}.
Interaction partners:
Sequence:
MVAPMKGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRATAQEAQSLGGRCVPVVCDSSQESEVKSLFEQVDREQKGRLDVLVNNAYAGVQAILNTTNKSFWEVPASIWDDINNVGLRGHYLCSVYGARLMVPAGKGLIVIVSSPGGLQHMFNVPYGVGKAACDRLAADCAHELRRHGVSYVSLWPGLVQTEMVKEFMAKEDTPEDPLFKKMKPDFSSAESPEMSGKCVVALATDPNILNLSGKVLPSCDLARRYGLKDIDGRPVKDYFSLGYALSQVSSLGWLNSFLPGFLRVPKWVVTLYNSKF
Protein: Rhodopsin (P35359)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Function: Photoreceptor required for image-forming vision at low light intensity. While most salt water fish species use retinal as chromophore, most freshwater fish use 3-dehydroretinal, or a mixture of retinal and 3-dehydroretinal (By similarity). Light-induced isomerization of 11-cis to all-trans retinal triggers a conformational change that activates signaling via G-proteins. Subsequent receptor phosphorylation mediates displacement of the bound G-protein alpha subunit by arrestin and terminates signaling (By similarity).
Subcellular location: Membrane {ECO:0000250|UniProtKB:P08100}; Multi-pass membrane protein {ECO:0000250|UniProtKB:P08100}. Cell projection, cilium, photoreceptor outer segment {ECO:0000269|PubMed:10349976}. Note=Synthesized in the inner segment (IS) of rod photoreceptor cells before vectorial transport to disk membranes in the rod outer segment (OS) photosensory cilia. {ECO:0000250|UniProtKB:P08100}.
Interaction partners:
- Recoverin a
- Cone transducin alpha subunit, alpha transducing activity polypeptide 2) subunit alpha-2)
- S-arrestin
- Guanine nucleotide-binding protein
- G protein-coupled receptor kinase
- Rhodopsin kinase grk7a
- Rhodopsin kinase grk7-b
- G protein-coupled receptor kinase
- Recoverin
- Recoverin b
Sequence:
MNGTEGPAFYVPMSNATGVVRSPYEYPQYYLVAPWAYGLLAAYMFFLIITGFPVNFLTLYVTIEHKKLRTPLNYILLNLAIADLFMVFGGFTTTMYTSLHGYFVFGRLGCNLEGFFATLGGEMGLWSLVVLAIERWMVVCKPVSNFRFGENHAIMGVAFTWVMACSCAVPPLVGWSRYIPEGMQCSCGVDYYTRTPGVNNESFVIYMFIVHFFIPLIVIFFCYGRLVCTVKEAAAQQQESETTQRAEREVTRMVIIMVIAFLICWLPYAGVAWYIFTHQGSEFGPVFMTLPAFFAKTSAVYNPCIYICMNKQFRHCMITTLCCGKNPFEEEEGASTTASKTEASSVSSSSVSPA
Protein: Putative D-lactate dehydrogenase (D-LDH) (EC 1.1.1.28) (Q54UF7)
Organism: Dictyostelium discoideum (Social amoeba)
Interaction partners:
- Probable phosphoserine aminotransferase
- Pyruvate kinase
- D-lactate dehydrogenase
- Pyruvate dehydrogenase E1 component subunit beta, mitochondrial
- Hydroxyacylglutathione hydrolase
- Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial
- NADP-dependent malic enzyme
- Serine--pyruvate aminotransferase
- Pyridoxine-5'-phosphate oxidase
- Glycine dehydrogenase
Sequence:
MKITLFSSKPYWVKWFNELNKFSYEINYVTSACDIKSVNEAKGSEAVCCFVNDDLSKEVIETLHSNGTKVILMRCAGFNKVDLDTANKLGIPVLRVPAYSPNAVSEYALSLIMALNRKTHKAHDRVRDANFEINGMEGFNMVSKVYGIVGTGNIGEQLCRVLKLGFGAKVIAYDIIENKAVTDIGIEYVKTLDEIWKQCDVISLHTPLNSQTKYMVNSESIEKMRDGVMIINVSRGALVNASDAIVGLKSGKISSLGMDVYENETDYFYQDHNGSIIKDDNLSLLISYPNVMITSHQAWYTKEAISCICGTSLQNFVDFRSNQIKKSNLVNNPISSQPTQ
Protein: Protein kinase domain-containing protein (A0A178V0F6)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Subcellular location: Membrane {ECO:0000256|ARBA:ARBA00004370}.
Interaction partners:
Sequence:
MASSLFFIFFLTSLLSSYLPLSVFSATVVEDLANLSPPPDFNTTISNNCLRDPMLRYCNNTSSSPMDIVEIFRSTIVASHLCNESKNPNCVESFPRIRIHGRPKTAALYLSFDFFWKYCPLTVVDIELVNNSLTNGFPTNVLSCAQIRTLDLSYNQFSGFVPVQDLSGLPNLTHLNLSYNRFSENKISDSEFFKRFNASSFIQSGVLPNVKRYKMKVLVLLIVFPIMVILLCFCFGWLCVKRPDYLPRTCRRRNKFTFAMLEAATDEFSDQHLVSMSNTVDIYKGTLRDGTETKIEVYKEKVSSEKRREFAEVCEMVFKLRHKNLVRVLGWCNSRNMRALVTEWIQGENVETWLSSSMALSWRRRLRVVLGVVEGICYLSDQWPEITFDLTTSSVLLSDDNQEPLISHFKIGDRNNLSTNIFNFGLFFVEMITNLRPDLGQEDSERRYLEYIRVHYPDNLERVIDEKMKIEGRTFDQVKQAITLGLMCTDIIPPLKQPSLTQIYDLVSSLYESSSRHH
Protein: Putative glutamine amidotransferase-like protein C13C5.04 (Q09686)
Organism: Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Interaction partners:
- Inosine-5'-monophosphate dehydrogenase
- Glutamyl-tRNA
- Dihydroorotate dehydrogenase
- Glutamine synthetase
- Uncharacterized glutaminase C222.08c
- Probable glutamate 5-kinase
- 1-
- Uncharacterized protein C4B3.03c
- Protein transport protein got1
- Aspartate--tRNA ligase, mitochondrial
Sequence:
MDYHIAILNADTPMVEITSAYGDYADMVKSLLQSGSEYYSTEWNLVTKTYEVYKNPNDYPQKEDFPNINAIIITGSKASATSDAPWIKKLISFVKDVLFKYPHIKIVGLCFGHQIVAKAAGVPIIQNPKGWEVSSTVVQLTENGEKFFGRKVININQMHQDMAVDVPEGFELLGSTEDCEFQIFYKPRQALTFQGHPEFSTEVVNTMVKVLRGTEVFTEQQKEEALKRSENPADNDFLAVSIVKFLLE
Protein: Maintenance of mitochondrial morphology protein 1 (O74368)
Organism: Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Function: Component of the ERMES/MDM complex, which serves as a molecular tether to connect the endoplasmic reticulum (ER) and mitochondria. Components of this complex are involved in the control of mitochondrial shape and protein biogenesis, and function in nonvesicular lipid trafficking between the ER and mitochondria. The mdm12-mmm1 subcomplex functions in the major beta-barrel assembly pathway that is responsible for biogenesis of all outer membrane beta-barrel proteins, and acts in a late step after the SAM complex. The mdm10-mdm12-mmm1 subcomplex further acts in the TOM40-specific pathway after the action of the mdm12-mmm1 complex. Essential for establishing and maintaining the structure of mitochondria and maintenance of mtDNA nucleoids.
Subcellular location: Endoplasmic reticulum membrane {ECO:0000255|HAMAP-Rule:MF_03103, ECO:0000269|PubMed:16823372}; Single-pass type I membrane protein {ECO:0000255|HAMAP-Rule:MF_03103, ECO:0000269|PubMed:16823372}. Note=The ERMES/MDM complex localizes to a few discrete foci (around 10 per single cell), that represent mitochondria-endoplasmic reticulum junctions. These foci are often found next to mtDNA nucleoids. {ECO:0000255|HAMAP-Rule:MF_03103}.
Interaction partners:
- Mitochondrial distribution and morphology protein 10
- Mitochondrial distribution and morphology protein 12
- Mitochondrial distribution and morphology protein 34
- Mitochondrial Rho GTPase 1
- Dynamin-related protein dnm1
- Probable mitochondrial import receptor subunit tom70
- Probable mitochondrial import receptor subunit tom40
- Mitochondrial import receptor subunit tom7
- Metaxin-like protein C409.19c
- Metaxin-1
Sequence:
MIHLPQGSFTQGLIVGQLLTLAIIYVFLRFFLFCSPIPKSVANSPKQTGNETPDETPSTPLSNNKKRYKKPLTILEPHILNLLYDVNEHEPESLDWFNVLIAQALIQFRYDACSNDVALRKLETVLNKGAQDKSMVDHIYVRDLSLGDGFPVFSHCRVLPHQHNSSQLRAEMLVSLTDNINCTVDTKLLLNFPKPAFATLPLSITVRICKFVGKIMIYFSPSNGAGQPAYMNLSFDPNFVISLQVSSLVGARSKLQDIPKITQLIESRIRQWFTNRCVSPQFQQIAIPNLWPTSAKEGHARSHAPQEESSNED
Protein: BHLH transcription factor (Os01g0915600 protein) (cDNA clone:J033022O19, full insert sequence) (Q5N802)
Organism: Oryza sativa subsp. japonica (Rice)
Subcellular location: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
Interaction partners:
- Os03g0726900 protein
Sequence:
MNCGPPDQLPPATAPSCFLNLNWDQSMDAAAGGHLDPALSSMVSSPASNSTGALHGISPQPHYGGGTPLSSPPKLNLSMMGQFHHYAAPPQVGGGGGGGGGLPILENLMPMGHLDQFLADPGFAERAARLSGFDARGGGGGGGYGGAGPAQFGLPDAGAAGASKEMELGNTRDESSVSDPAPGGAEIPPKGASDGNARKRKASGKGKGKDSPMSTSAAKEDSSGKRCKSTEESNAAAEENSGKGKAAQSNSENGGGKKQGKDSSSKPPEPPKDYIHVRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPQLDFNNLPNLLAKDMHQSCSPLQSSHFPLETSGAPLPYINQPQQGNPLGCGLTNGMDNQGSMHPLDPAFCRPMGSHHPFLNGVSDAASQVGAFWQDDLQSVVQMDMGQSQEIATSSNSYNGSLQTVHMKMEL
Protein: Ski oncogene (Proto-oncogene c-Ski) (Q1ECW8)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Interaction partners:
Sequence:
METVARQSFQPHPGLQQTLKQFHLSSMISLGGPAAFSARWQHDLLFKKDGKDIPEPVLHLPPMQPPPVMPGPLFIPSDRSTERCETVLEGETISCFVVGGEKRLCLPQILNTVLRDFSLQQINSVCDDLHIYCSRCTADQLEILKVMGILPFAAPSCGLITKTDAERLCNALIYGGTYPPHSKKELYGSIELELTEKSFKIYHECFGKCKGLLVPELYTSPNAPCIQCMDCRLMYPTHKFVVHSHKSLENRTCHWGFDSANWRAYVLLSPDYTGKEEKARLEQLLDDIKEKFDFSNKYKRKASQASDPIPAKKPKHDDFPAQSPSGDKDKQPDWLRSLSASANKGLNCIQPRQRPSAFRPWSPNISVSDKDGAGRPASMLRESFYNYKSLESAVAPNVALTPPQKGGQASPSAPSSSHPHGAESEGASRGRKRRLTGDTQPSPQPCAAATASKPLPASPEEHESDVEVEVESREELTSSLSSLSSPSFPSSSSAKDLSSPSGPVATLPAVVTPAAGPPEGPLLSGGEGHAMNNLESELETLRQALDNGLDSKESKEKFLHEIVKMRVKQEEKLGSALQAKRSLQQELEFLRVAKKEKLREATEAKRNLRKEIERLRAESERKMREANESRMRLKRELEQARQLRVCDKGCEAGRLRAKYSAQIEDLQVKLQHAEADREQLRADLIHEREAREHLERVVKELQVQLWPKSPSKNGTDVAHPPAKDSNN
Protein: ATP synthase subunit delta, chloroplastic (ATP synthase F(1) sector subunit delta) (F-type ATPase subunit delta) (Q9SSS9)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation (Potential). Essential for photosynthesis, probably by facilitating electron transport in both photosystems I and II.
Subcellular location: Plastid, chloroplast thylakoid membrane {ECO:0000255|HAMAP-Rule:MF_01416, ECO:0000269|PubMed:17103225}; Peripheral membrane protein {ECO:0000255|HAMAP-Rule:MF_01416, ECO:0000269|PubMed:17103225}.
Interaction partners:
- ATP synthase subunit b, chloroplastic
- ATP synthase subunit d, mitochondrial
- ATP synthase subunit beta, chloroplastic
- ATP synthase subunit gamma, mitochondrial
- ATP synthase subunit alpha, chloroplastic
- ATP synthase epsilon chain, chloroplastic
- ATP synthase gamma chain 1, chloroplastic
- ATP synthase subunit epsilon, mitochondrial
- ATP synthase subunit alpha
- ATP synthase subunit 9
Sequence:
MASLQQTLFSLQSKLPPSSFQIARSLPLRKTFPIRINNGGNAAGARMSATAASSYAMALADVAKRNDTMELTVTDIEKLEQVFSDPQVLNFFANPTITVEKKRQVIDDIVKSSSLQSHTSNFLNVLVDANRINIVTEIVKEFELVYNKLTDTQLAEVRSVVKLEAPQLAQIAKQVQKLTGAKNVRVKTVIDASLVAGFTIRYGESGSKLIDMSVKKQLEDIASQLELGEIQLAT
Protein: Serine/arginine-rich splicing factor 2 (O45781)
Organism: Caenorhabditis elegans
Interaction partners:
- MARVEL domain-containing protein
- Cleavage stimulation factor 50 kDa subunit
- Suppressor of forked domain-containing protein
- Pre-mRNA polyadenylation factor Fip1 domain-containing protein
- RRM domain-containing protein
- Eukaryotic initiation factor 4A
- DUF3453 domain-containing protein
- Eukaryotic translation initiation factor 4E-2
- Probable S-adenosylmethionine synthase 1
- Cleavage and polyadenylation specificity factor subunit 3
Sequence:
MADEIFKAFIGGLPYDSIATDIETILKHCKFTDEELKKFDIHLVHDRDSGSFKGFAYVTFENEQQMNTAISGLNGADFGNRVLKVNRAQQRDRSDRGGGRGGRGGNFGDRGGRGRGAGGFRRGGEGGRFNEGERRGGFGGGGHRGGYRQRRESEEQHKAEETSDPSAPPAERPRLNLKPRTTDAAEIEARKKQEEEETKRRQEKLFQ
Protein: Putative iron ABC transporter, periplasmic iron-binding protein (Q0C215)
Organism: Hyphomonas neptunium (strain ATCC 15444)
Interaction partners:
- Iron compound ABC transporter, permease protein
- Iron compound ABC transporter, ATP-binding protein
- Iron compound ABC transporter, permease protein
- TonB-dependent receptor
- Iron compound ABC transporter, ATP-binding protein
- Transporter, outer membrane receptor
Sequence:
MSRLAIFSLLAFGLSACGAPPKPQTDRADRPMRIVSLDYCADQYVLKLADAEQILAISPDGVKEFSYMRHEAAGVPTVRPVAEDVLLLKPDLVVRAYGGGPNAAAFFERADVPVLTVGWTSNVDSEEVGSIPGLIHYMAEGLGQSERGRALVAEFRARLEALRKRTNGETALYMTPAGITTGPGSMVHEMLLEAGFENFERKPGWRSLPLERLAYEQPDAIAAAFFEQLTNHPDSWSPMKHPVAKRQMNEQTMVPLKGAWTACGGWFILDAIEALAEGGAE
Protein: Peptidyl-prolyl cis-trans isomerase Pin1 (PPIase Pin1) (EC 5.2.1.8) (PIN1At) (Rotamase Pin1) (Q9SL42)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Prolyl cis/trans isomerase with specificity for phospho-Ser-Pro bonds.
Interaction partners:
- Peptidyl-prolyl cis-trans isomerase CYP59
- Rhodanese-like/PpiC domain-containing protein 12, chloroplastic
- Serine/threonine-protein phosphatase PP1 isozyme 4
- Peptidyl-prolyl cis-trans isomerase FKBP42
- Serine/threonine-protein kinase D6PK
- Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform
- Phosphatidylinositol 4-phosphate 5-kinase 1
- Serine/threonine-protein kinase D6PKL1
- Serine/threonine-protein kinase D6PKL3
- Phosphatidylinositol 4-phosphate 5-kinase 2
Sequence:
MASRDQVKASHILIKHQGSRRKASWKDPEGKIILTTTREAAVEQLKSIREDIVSGKANFEEVATRVSDCSSAKRGGDLGSFGRGQMQKPFEEATYALKVGDISDIVDTDSGVHIIKRTA
Protein: HCG1811249, isoform CRA_f (Laminin subunit alpha-3) (A0A0A0MTS5)
Organism: Homo sapiens (Human)
Subcellular location: Secreted, extracellular space, extracellular matrix, basement membrane {ECO:0000256|ARBA:ARBA00004302}.
Interaction partners:
Sequence:
MPPAVRRSACSMGWLWIFGAALGQCLGYSSQQQRVPFLQPPGQSQLQASYVEFRPSQGCSPGYYRDHKGLYTGRCVPCNCNGHSNQCQDGSGICVNCQHNTAGEHCERCQEGYYGNAVHGSCRACPCPHTNSFATGCVVNGGDVRCSCKAGYTGTQCERCAPGYFGNPQKFGGSCQPCSCNSNGQLGSCHPLTGDCINQEPKDSSPAEECDDCDSCVMTLLNDLATMGEQLRLVKSQLQGLSASAGLLEQMRHMETQAKDLRNQLLNYRSAISNHGSKIEGLERELTDLNQEFETLQEKAQVNSRKAQTLNNNVNRATQSAKELDVKIKNVIRNVHMLNRIRTWQKTHQGENNGLANSIRDSLNEYEAKLSDLRARLQEAAAQAKQANGLNQENERALGAIQRQVKEINSLQSDFTKYLTTADSSLLQTNIALQLMEKSQKEYEKLAASLNEARQELSDKVRELSRSAGKTSLVEEAEKHARSLQELAKQLEEIKRNASGDELVRCAVDAATAYENILNAIKAAEDAANRAASASESALQTVIKEDLPRKAKTLSSNSDKLLNEAKMTQKKLKQEVSPALNNLQQTLNIVTVQKEVIDTNLTTLRDGLHGIQRGDIDAMISSAKSMVRKANDITDEVLDGLNPIQTDVERIKDTYGRTQNEDFKKALTDADNSVNKLTNKLPDLWRKIESINQQLLPLGNISDNMDRIRELIQQARDAASKVAVPMRFNGKSGVEVRLPNDLEDLKGYTSLSLFLQRPNSRENGGTENMFVMYLGNKDASRDYIGMAVVDGQLTCVYNLGDREAELQVDQILTKSETKEAVMDRVKFQRIYQFARLNYTKGATSSKPETPGVYDMDGRNSNTLLNLDPENVVFYVGGYPPDFKLPSRLSFPPYKGCIELDDLNENVLSLYNFKKTFNLNTTEVEPCRRRKEESDKNYFEGTGYARVPTQPHAPIPTFGQTIQTTVDRGLLFFAENGDRFISLNIEDGKLMVRYKLNSELPKERGVGDAINNGRDHSIQIKIGKLQKRMWINVDVQNTIIDGEVFDFSTYYLGGIPIAIRERFNISTPAFRGCMKNLKKTSGVVRLNDTVGVTKKCSEDWKLVRSASFSRGGQLSFTDLGLPPTDHLQASFGFQTFQPSGILLDHQTWTRNLQVTLEDGYIELSTSDSGGPIFKSPQTYMDGLLHYVSVISDNSGLRLLIDDQLLRNSKRLKHISSSRQSLRLGGSNFEGCISNVFVQRLSLSPEVLDLTSNSLKRDVSLGGCSLNKPPFLMLLKGSTRFNKTKTFRINQLLQDTPVASPRSVKVWQDACSPLPKTQANHGALQFGDIPTSHLLFKLPQELLKPRSQFAVDMQTTSSRGLVFHTGTKNSFMALYLSKGRLVFALGTDGKKLRIKSKEKCNDGKWHTVVFGHDGEKGRLVVDGLRAREGSLPGNSTISIRAPVYLGSPPSGKPKSLPTNSFVGCLKNFQLDSKPLYTPSSSFGVSSCLGGPLEKGIYFSEEGGHVVLAHSVLLGPEFKLVFSIRPRSLTGILIHIGSQPGKHLCVYLEAGKVTASMDSGAGGTSTSVTPKQSLCDGQWHSVAVTIKQHILHLELDTDSSYTAGQIPFPPASTQEPLHLGGAPANLTTLRIPVWKSFFGCLRNIHVNHIPVPVTEALEVQGPVSLNGCPDQ
Protein: GLIS family zinc finger 2b (Zinc finger protein GLIS2b isoform X1) (A0A0R4IE83)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Subcellular location: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
Interaction partners:
- ARVCF delta catenin family member a.
Sequence:
MLSLDEPLDLKVPRGWISGRDRGARSPPTLSSSPIHGKGAGQLRMADDGTAVIVPASPASPHTGVLRSNLETPTPPAVDLSLSPSSRNTACSPELSNGSGSAPVFPGDSAHIRYVEGGATSQAFQFFVPIGAGGGLHLPSSMFIRQPKDTRASPDLSADEQLACRWRKCHLLFDSLQDLVDHVNDFHVKPEKDSGYCCHWEGCARKGRGFNARYKMLIHIRTHTNEKPHRCPTCNKSFSRLENLKIHNRSHTGEKPYICPYEGCNKRYSNSSDRFKHTRTHYVDKPYYCKMVGCLKRYTDPSSLRKHIKAHGHFVAQEQGGGVGSLIKQSQIAGVGKDSELTYVSGAHIIIPSAAAALLGGHALQGLGGSLPLSPLSPRPLDLSTLGCPNSPTAGLGGTPILSFSSSPLGLTKSPLLSPSFSSSTLGLPMLPILGSERRDHGKGKIRGEEGEDEIHGGVLNLSTGASHDPLSWVVIPSGPVVLKPAVVN
Protein: [Pyruvate dehydrogenase [acetyl-transferring]]-phosphatase 2, mitochondrial (PDP 2) (EC 3.1.3.16) (EC 3.1.3.43) (Autophagy-related protein phosphatase 1) (Phosphatase two C protein 6) (Protein phosphatase 2C homolog 6) (PP2C-6) (Protein phosphatase of PDH protein 2) (Pyruvate dehydrogenase complex phosphatase 2) (PDC phosphatase 2) (P25646)
Organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Function: Protein phosphatase that shows typical type 2C protein phosphatase (PP2C) activity. Catalyzes the dephosphorylation and concomitant reactivation of the E1 alpha subunit (PDA1) of the pyruvate dehydrogenase complex. Required for efficient mitophagy in stationary phase cells.
Subcellular location: Mitochondrion intermembrane space {ECO:0000269|PubMed:17166847, ECO:0000269|PubMed:18180296}. Mitochondrion matrix {ECO:0000269|PubMed:17166847, ECO:0000269|PubMed:18180296}.
Interaction partners:
- [Pyruvate dehydrogenase [acetyl-transferring]]-phosphatase 1, mitochondrial
- Protein phosphatase 2C homolog 7, mitochondrial
- Protein phosphatase 2C homolog 1
- Gamma-glutamyl phosphate reductase
- Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial
- Autophagy-related protein 33
- Probable secreted beta-glucosidase UTH1
- Pyruvate dehydrogenase E1 component subunit beta, mitochondrial
- Autophagy-related protein 32
- Retrograde regulation protein 3
Sequence:
MRLGNAYAYCKPSQNVGLKLDLLRGLPGYVGHATSRINRLENQDNYSIKMMRSWPNAYGSALNCSVFDGHGEKGAQLSQLLADKLCSSLDFPEPSWDKQDLKKLVQEYARRFPEGNYWKHKLSTFEKFYNKFIKNCNSKQELLLMKEGDSAILGQNGGRMIFDKMGNIIDKIALLTELDRLRLFYGFARFDLDQCCGLGTAAGSTASSIFLYPYDDPNAPIDEGKDDDSWIISHSGLLKLIVTQVGDSKIILCDQDGIAHALTTTHHINSSRERHRLSIDPSRLDPDAFGETRFLNNFANTRSFGDVAGKPYGISSEPDIFSFLVGNTLHLPRSERSKLPFNGDECFLALVTDGITNKLADQEVVDLITSTVNSWGLKKATPQFVAEETIKFIQAIATKHSDNATCVVVRLSNWGNWPNVDRTGPQRETKLMNAQSNETKLN