wanglab/gogpt-training-data huggingface dataset:
Protein: Nuclear hormone receptor family member nhr-19 (Q09528)
Organism: Caenorhabditis elegans
Function: Orphan nuclear receptor.
Subcellular location: Nucleus {ECO:0000255|PROSITE-ProRule:PRU00407}.
Interaction partners:
- C3H1-type domain-containing protein
- PAS domain-containing protein cky-1
- C2H2-type domain-containing protein
- Uncharacterized protein C16C10.8
- Nuclear hormone receptor family member nhr-49
- Zinc finger transcription factor family protein 17
- SSD domain-containing protein
Sequence:
MTTVFQTMPTFLAGLNIANFGAATSQFPKLESEITAPRQSMSTAFQKMPTFTSVISVPSIAAIAPQMPSVKPEKGVIGQCLICGEPSTGKHYGIVACLGCKTFFRRAVVQRQDTECKREKPCDVTTMARKACRACRYRKCLESGMSKEALQPRRDLIGCRRIRSRPSCSTSTPTPPRPQVEDKSQYLTLLENLTTIDDRLRKKKLEVVASRQAAVDLAVLAKQGCMSITDTSGPSTSRYVPGGTSPNGGDHKMMVMLGTDISVSTQSELLMMLEWTRTLPVFASLPVQDRSVILKRFAVHCLILEHGYYTAQANIDDVWLITNGTCMPRNVEKLEEGCKISVSADRRWRQEKLYKQMTDCCIDEVATPLRNLKLSPQEIVVIKIIVLFNCGCSSDYSEITEASRRIVLTFRNKVVSALFAYYESVGLQNYAERFGNLVLMLSGVSSAASSMLEAYQVMRLFKITPFDPLSQELLFNI
Protein: Protein PLASTID MOVEMENT IMPAIRED 15 (Q9FF41)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Required for the chloroplast avoidance response under high intensity blue light. This avoidance response consists in the relocation of chloroplasts on the anticlinal side of exposed cells.
Interaction partners:
- Protein WEAK CHLOROPLAST MOVEMENT UNDER BLUE LIGHT 1
- Uncharacterized protein At1g66480
- Chlorophyll a-b binding protein
- J domain-containing protein required for chloroplast accumulation response 1
- Protein SENSITIVITY TO RED LIGHT REDUCED 1
- Protein PLASTID MOVEMENT IMPAIRED 1-RELATED 1
Sequence:
MLNRAMENSDMKRNSSTLLDLPVVKSSLVVEAIHMSRKKLGWYNESRRDSETVKARVEAGLSEVKKSVEELALLIKRSNRSAGFQEKDMEVLKMEEKYAEVMRVLEVVKEEVSRVKLDVSSVLIERVAAEEKVEELRFKTEGGLRLLESLKKEIEVANEEHLMVALGKIEALKGYKEIERQREGKAIKVLDLLVERNKRIKNMLEEAERSKDIEIELFETSTDVEMLETQLKLFKKMERRVQGRDSSSMSRSNRSFGRGKYSLSVLKEVTEGKKEELASVKVEIFRVMTVMDALRNEIIRARDETACLGKILREDDVKIEKLNSKILIEKSKLEVVSIAEERISSLAENFVGSLEKIKKSRNAAKKEEFLFKEEKTVTKAETQKTKLDIDKKESELNSKLDELEKVKHTEALVLEKLESLVEDMMESREMESEHCSTITISRFEYEYLSKHASQAEETAEKKVAAAAAWVEALKASTKSFLMKTETLMRESEMTKAEEEREVFRMERSLSTKRLVEGEIQKIKRNSEAEGYISPKPVGKFTPVQRGKPRRYSSVGTPTFFVIKKKKKVPRLAKFFSRRS
Protein: Protein LSM14 homolog car-1 (Cytokinesis, apoptosis, RNA-associated protein car-1) (Q9XW17)
Organism: Caenorhabditis elegans
Function: Transcriptional regulator. Involved in modulating embryonic expression of ATP-dependent chaperone cdc-48.1. May play a role in mRNA gene silencing, and RNA granule (P-body) assembly.
Subcellular location: Nucleus {ECO:0000305|PubMed:18430416}.
Interaction partners:
- ATP-dependent RNA helicase cgh-1
- Translational repressor ifet-1
- m7GpppN-mRNA hydrolase dcap-2
- Polyadenylate-binding protein
- CCCH-type zinc finger protein oma-1
- CSD domain-containing protein
- mRNA-decapping enzyme 1
- Protein lin-41
- Female germline-specific tumor suppressor gld-1
- CSD domain-containing protein
Sequence:
MSNQTPYIGSKISLISKLDIRYEGILYTVDTNDSTIALAKVRSFGTEKRPTANPVAARDDVYEYIIFKASDIKDLIVCDTPKMANIGGGLPYDPAIISVSSRSAPASDGAPAASAGSSRAGTPSRNSPLGQIIQNQRPGRGGYQQNFQANRGYNNYRGGFAGGYNNQRGHNNYGVPRVNHREKLKFESDFDFEKANEKFQEVLVDNLEKLNIEDKAEPEVEEKKDAAFYDKKTSFFDNISCESLEKAEGKTGRPDWKKERETNQETFGHNAVRSLNYRRGFGGRGRGGNRGYGGYNNGYQHQHQHRGGYNGGYRQNNGGYRRGGYAPRDNQGNTAAAAEQ
Protein: SERTA domain containing 1 variant (SERTA domain containing 1, isoform CRA_a) (cDNA FLJ90171 fis, clone MAMMA1000403, highly similar to SERTA domain-containing protein 1) (Q53GC0)
Organism: Homo sapiens (Human)
Interaction partners:
Sequence:
MLSKGLKRKREEEEEKEPLAVDSWWLDPGHTAVAQAPPAVASSSLFDLSVLKLHHSLQQSEPDLRHLVLVVNTLRRIQASMAPAAALPPVPSPPAAPSVADNLLASSDAALSASMASLLEDLSHIEGLSQAPQPLADEGPPGRSIGGAAPSLGALDLLGPATGCLLDDGLEGLFEDIDTSMYDNELWAPASEGLKPGPEDGPGKEEAPELDEAELDYLMDVLVGTQALERPPGPGR
Protein: Cellular tumor antigen p53 (Tumor suppressor p53) (P10361)
Organism: Rattus norvegicus (Rat)
Function: Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of BAX and FAS antigen expression, or by repression of Bcl-2 expression. Its pro-apoptotic activity is activated via its interaction with PPP1R13B/ASPP1 or TP53BP2/ASPP2 (By similarity). However, this activity is inhibited when the interaction with PPP1R13B/ASPP1 or TP53BP2/ASPP2 is displaced by PPP1R13L/iASPP (By similarity). In cooperation with mitochondrial PPIF is involved in activating oxidative stress-induced necrosis; the function is largely independent of transcription. Prevents CDK7 kinase activity when associated to CAK complex in response to DNA damage, thus stopping cell cycle progression. Induces the transcription of long intergenic non-coding RNA p21 (lincRNA-p21) and lincRNA-Mkln1. LincRNA-p21 participates in TP53-dependent transcriptional repression leading to apoptosis and seems to have an effect on cell-cycle regulation. Regulates the circadian clock by repressing CLOCK-ARNTL/BMAL1-mediated transcriptional activation of PER2.
Subcellular location: Cytoplasm {ECO:0000250|UniProtKB:P04637}. Nucleus {ECO:0000250|UniProtKB:P04637}. Nucleus, PML body {ECO:0000250|UniProtKB:P04637}. Endoplasmic reticulum {ECO:0000250|UniProtKB:P04637}. Mitochondrion matrix {ECO:0000250|UniProtKB:P04637}. Cytoplasm, cytoskeleton, microtubule organizing center, centrosome {ECO:0000250|UniProtKB:P04637}. Note=Interaction with BANP promotes nuclear localization. Recruited into PML bodies together with CHEK2. Translocates to mitochondria upon oxidative stress. Translocates to mitochondria in response to mitomycin C treatment (By similarity). Competitive inhibition of TP53 interaction with HSPA9/MOT-2 by UBXN2A results in increased protein abundance and subsequent translocation of TP53 to the nucleus (By similarity). {ECO:0000250|UniProtKB:P04637}.
Interaction partners:
- Apoptosis regulator Bcl-2
- E3 ubiquitin-protein ligase Mdm2
- Protein Mdm4
- Histone lysine acetyltransferase CREBBP
- Serine-protein kinase ATM
- Ubiquitin carboxyl-terminal hydrolase 7
- Huntingtin
- Bcl-2-like protein 1
- NAD-dependent protein deacetylase sirtuin-1
- Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN
Sequence:
MEDSQSDMSIELPLSQETFSCLWKLLPPDDILPTTATGSPNSMEDLFLPQDVAELLEGPEEALQVSAPAAQEPGTEAPAPVAPASATPWPLSSSVPSQKTYQGNYGFHLGFLQSGTAKSVMCTYSISLNKLFCQLAKTCPVQLWVTSTPPPGTRVRAMAIYKKSQHMTEVVRRCPHHERCSDGDGLAPPQHLIRVEGNPYAEYLDDRQTFRHSVVVPYEPPEVGSDYTTIHYKYMCNSSCMGGMNRRPILTIITLEDSSGNLLGRDSFEVRVCACPGRDRRTEEENFRKKEEHCPELPPGSAKRALPTSTSSSPQQKKKPLDGEYFTLKIRGRERFEMFRELNEALELKDARAAEESGDSRAHSSYPKTKKGQSTSRHKKPMIKKVGPDSD
Protein: Protein PET100, mitochondrial (P38958)
Organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Function: Required for the biogenesis of cytochrome c oxidase. Probably for its assembly into an active holoenzyme.
Subcellular location: Mitochondrion membrane {ECO:0000305}; Single-pass membrane protein {ECO:0000305}.
Interaction partners:
- Protein PET117
- Cytochrome c oxidase copper chaperone
- Cytochrome c oxidase assembly factor 6
- Protein SCO2
- Protoheme IX farnesyltransferase, mitochondrial
- mRNA-binding protein PUF3
- Heme A synthase COX15
- Cytochrome c oxidase subunit 6, mitochondrial
Sequence:
MGLFNNFKFKYTRAQLEIFRFSFCLLAPVAVMYYIGTDTDKKLNVPGFWPDPATLNQIPKEPYEIKAELARMKKERLEKRLRLEKKIQEEFGLDLEEEKEKIKRDLALKKG
Protein: Periphilin 1 (F8WF16)
Organism: Homo sapiens (Human)
Interaction partners:
Sequence:
MAYRRDEMWSEGRYEYERIPRERAPPRSHPSDESGYRWTRDDHSASRQPEYRDMRDGFRRKSFYSSHYARERSPYKRDNTFFRESPVGRKDSPHSRSGSSVSSRSYSPERSKSYSFHQSQHRNKERPVQSLKTSRDTSPSSGSAVSSSKVLDKPSRLTEKELAEAASKWAAEKLEKSDESNLPEISEYEAGSTAPLFTDQPEEPESNTTHGIELFEDSQLTTRSKAIASKTKEIEQVYRQDCETFGMVVKMLIEKDPSLEKSIQFALRQNLHEIAGADTIQCLPGQRGFEGTSWPHNKMHSVS
Protein: Phosphatidylinositol transfer protein cytoplasmic 1 (J3QRS7)
Organism: Homo sapiens (Human)
Interaction partners:
Sequence:
MISKHSHEQSDRGEGVEVVQNEPFEDPHHGNGQFTEKRVYLNSKLPSWARAVVPKIFYVTEKAWNYYPYTITEYTCSFLPKFSIHIETKYEDNKGSND
Protein: Aldehyde oxidase 1 (EC 1.-.-.-, EC 1.2.3.1, EC 1.2.3.8) (LD37006p) (Q9VF53)
Organism: Drosophila melanogaster (Fruit fly)
Subcellular location: Peroxisome {ECO:0000256|ARBA:ARBA00004275}.
Interaction partners:
- Uricase
- Guanine deaminase
- purine-nucleoside phosphorylase
- Aldehyde oxidase 3, isoform A)
- Xanthine dehydrogenase
Sequence:
MAGRITINGTSHEVNLSALPADISLNTFIREYAGLTGTKFMCQEGGCGVCVCTLTGIHPETGELRTWAVNSCLTLLNTCLGLEVTTSEGLGNKRVGYHAIQQRLAKMNGTQCGYCSPGIVMNMYGLLKSKGGKVTMEEVENSFGGNICRCTGYRPILDAMKSFAVDSNIQVPAECIDIEDLSTKKCPKTGQTCSGSCKKQQPKGSQLYPDGSRWSWPVSLGDLFAALQGAVKEKLPYMLVAGNTAHGVYRRSPDIKAFIDVSGLAELKGHKLSADNSSLTLGGNLSLSETMELCRQLENTKGFEYLSQVWQHLDWIANVPVRNAGTLAGNLSIKHAHPEFPSDVFIVLEALDAQVIVQEAVDKQQTVSLASYLGSSMEGKIIRGLVLRAYPKERFAFDSYKIMPRAQNAHAYVNAAFLVEFTADAKVKSARICFGGIHPEFVHATAIENLIRDKNPFENGLVEKAFGQLSTLLQPDAVLPDASPVYRRKLACGLFYKFLLKIAAQRKQGLGSRFVTGGSLLKRPVSSGQQSFETFQEHYPVTKATEKHEGLIQCSGEATYSNDLPTQHNQLWAAFVIAKKVGAKVTKVDTQPALDLPGVVAYLDAKDIPGPNYVGPKIRDQFFFPKDEELFATGEIKFYGQPVGIILANSNSLANRAAELVKLTYEGGAEEILPSLKAVLDKVGSEAGNNKRLEQPIKSTIDVLQLEEPFDVSSSGQLDMGLQYHYYMEPQTTVVLPFEGGLQVYAATQWMDLTQDTIANVLNLKSNDVQVKTRRIGGGYGGKATRCNLAAAAAALAAHKLNRPIRFVQSLESIMTSLGKRWAFHCDYDFFVQKSGKISGIVSRFYEDAGYLANESPIGHTVLLSKNCYEFSDNYKLDGYLVCTDSPSNTPCRAPGSVEGIAMMENIIEHIAFETGVDPADVRFANLLPAHKMGDMMPRFLESTKYRERKAEAIAHNKENRWHKRGLGLCIMEYQIGYFGQYPATVAIYHSDGTVVVSHGGIEMGQGMNTKISQVAAHTLGIPMEQVRIEASDTINGANSMVTGGAVGSETLCFAVRKACETLNERLKPVREEVKPENWQDLIQEAYNRKINLIASDQCKQGDMDPYSVCGLCLTEVELDVLTGNYIVGRVDILEDTGESLNPNVDIGQIEGAFMMGLGYWTSEQVIADPKTGECLTNRTWTYKPPGAKDIPTDLRIELLPKSPNKAGFMRSKATGEPAICLSIAVAFALQQALQSARDDAGVPKSWVTLTAPMTPEHLVLHSGTEPSQFKLN
Protein: Ribonuclease P protein subunit p40 (RNaseP protein p40) (RNase P subunit 1) (O75818)
Organism: Homo sapiens (Human)
Function: Component of ribonuclease P, a ribonucleoprotein complex that generates mature tRNA molecules by cleaving their 5'-ends. Also a component of the MRP ribonuclease complex, which cleaves pre-rRNA sequences.
Subcellular location: Nucleus, nucleolus {ECO:0000305}.
Interaction partners:
- Ribonuclease P protein subunit p25
- Ribonuclease P/MRP protein subunit POP5
- Ribonuclease P protein subunit p38
- Ribonuclease P protein subunit p30
- Ribonuclease P protein subunit p29
- Ribonuclease P protein subunit p21
- Ribonuclease P protein subunit p20
- Ribonuclease P protein subunit p14
- Ribonucleases P/MRP protein subunit POP1
- Ribonuclease P protein subunit p25-like protein
Sequence:
MATLRRLREAPRHLLVCEKSNFGNHKSRHRHLVQTHYYNYRVSFLIPECGILSEELKNLVMNTGPYYFVKNLPLHELITPEFISTFIKKGSCYALTYNTHIDEDNTVALLPNGKLILSLDKDTYEETGLQGHPSQFSGRKIMKFIVSIDLMELSLNLDSKKYERISWSFKEKKPLKFDFLLAWHKTGSEESTMMSYFSKYQIQEHQPKVALSTLRDLQCPVLQSSELEGTPEVSCRALELFDWLGAVFSNVDLNNEPNNFISTYCCPEPSTVVAKAYLCTITGFILPEKICLLLEHLCHYFDEPKLAPWVTLSVQGFADSPVSWEKNEHGFRKGGEHLYNFVIFNNQDYWLQMAVGANDHCPP
Protein: Prion protein 2 (Prion protein, related sequence 3 precursor) (Q5K4F8)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Interaction partners:
Sequence:
MGRLTILLLCLALVVSVGAKRGGGSKGGFGWGKTSSSSNKGGSSSGNKGGSSSSSSSSSSSKGTSSHGTHTSPGNYPRQPQVPNQNPPPYPGAGGGYPGQGRYPPAGSNPGYPNQGSYPGRAGYPNQGGYPAQGGYPAQGGYPAQGGYPAQGGYPAQGGYPAQGGYPQGNYPGRSGYPGQGGYPAQGGYPGGASYPGAGAGSYPNRYPGGNPYPVGGSYPGYPVRGGSSPNQFGGGVGGAGGYPGAAQYPNWNPNNKIMSPAYGGNYGGYGYGGRSPFAQSVQGMGMAPSYKSKGFGKQAIIAAGAGAVAGMALGYGLGSFPRPRFHFHNPQEEYYYNHYMYRRYGQTPPDGNMNGNTNSQGGIPGDAGSASAGQGNLNPHEIFQNPPPQSYDKFMDTCMKRTDLLREKSEGRSRRSPDLFEPQAAEVDNDPSEMQENVTNNNSTSERTNSAASTDDSVTTNPPETPSQPQKQTQERAAEANDDNDGDTVSIMEIGYPMLIEQMKARRCVELYMVYAEQHAEKQAQAQAKMADEARNGSGNLPGPISHGGMLLITSILSLIFSSLLH
Protein: MPN domain-containing protein (Q580G6)
Organism: Trypanosoma brucei brucei (strain 927/4 GUTat10.1)
Interaction partners:
- ER membrane protein complex subunit 2
- ER membrane protein complex subunit 3
- ER membrane protein complex subunit 4
- ER membrane protein complex subunit 1
- ER membrane protein complex subunit 6
- ER membrane protein complex subunit 7 beta-sandwich domain-containing protein
Sequence:
MPGQVSSASLPPVISSVQAYVKALLHCHKYPTQAVSGFLIGKRISATSNTNASSPASNSSAAATPTTVLGANAIPNFTANAISATNADGNNVNSSGSSSDEAECIFVADAVPLFHTIIMTDPHPMMTVAYAQVSSYARTKGLVLLGYYIANERTGDTAVCSLTENVLRMLHSRKSGVHEPLLWRIVSTPSGDSVDVRGAYYNSGSSSFTDAPSLTFGRWNSDTLSCETTEPKAAAVEAFENSMDALKQFQLVDFEDHLESVQLNYLDQTVSA
Protein: cDNA FLJ11853 fis, clone HEMBA1006758, highly similar to Homo sapiens protocadherin beta 13 (PCDH-beta13) mRNA (Q9HAB4)
Organism: Homo sapiens (Human)
Subcellular location: Membrane {ECO:0000256|ARBA:ARBA00004167}; Single-pass membrane protein {ECO:0000256|ARBA:ARBA00004167}.
Interaction partners:
Sequence:
MEASGKLICRQRQVLFSFLLLGLSLAGAAEPRSYSVVEETEGSSFVTNLAKDLGLEQREFSRRGVRVVSRGNKLHLQLNQETADLLLNEKLDREDLCGHTEPCVLRFQVLLESPFEFFQAELQVIDINDHSPVFLDKQMLVKVSESSPPGTTFPLKNAEDLDVGQNNIENYIISPNSYFRVLTRKRSDGRKYPELVLDKALDREEEAELRLTLTALDGGSPPRSGTAQVYIEVLDVNDNAPEFEQPFYRVQISEDSPVGFLVVKVSATDVDTGVNGEISYSLFQASEEIGKTFKINPLTGEIELKKQLDFEKLQSYEVNIEARDAGTFSGKCTVLIQVIDVNDHAPEVTMSAFTSPIPENAPETVVALFSVSDLDSGENGKISCSIQEDLPFLLKSAENFYTLLTERPLDRESRAEYNITITVTDLGTPMLITQLNMTVLIADVNDNAPAFTQTSYTLFVRENNSPALHIRSVSATDRDSGTNAQVTYSLLPPRVVVLDANDNSPFVLYPPQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKATELGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFSQPYLPLPEAAPTQAQADLLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASVGRCLVPEGPLPGHLVDMSGTRTLSQSYQYEVCLAGGSGTNEFKFLKPIIPNFPPQCPGKEIQGNSTFPNNFGFNIQ
Protein: Transmembrane protein 120A (Ion channel TACAN) (Q8C1E7)
Organism: Mus musculus (Mouse)
Function: Ion channel involved in sensing mechanical pain. Contributes to mechanosensitive currents in nocireceptors and detecting mechanical pain stimuli. May also be required for efficient adipogenesis.
Subcellular location: Cell membrane {ECO:0000269|PubMed:32084332, ECO:0000269|PubMed:39147733}; Multi-pass membrane protein {ECO:0000250|UniProtKB:Q9BXJ8}. Nucleus envelope {ECO:0000269|PubMed:20091084}. Nucleus inner membrane {ECO:0000250|UniProtKB:Q9BXJ8}; Multi-pass membrane protein {ECO:0000250|UniProtKB:Q9BXJ8}. Endoplasmic reticulum {ECO:0000250|UniProtKB:Q9BXJ8}.
Interaction partners:
Sequence:
MQSPPPDPLGDCLRNWEDLQQDFQGIQETHRLYRLKLEELTKLQANCTNSITRQKKRLQELALVLKKCRPSLPSESMEAAQELENQMKERQGLFFDMEAYLPKKNGLYLSLVLGNVNVTLLSKQAKFAYKDEYEKFKLYLTIILIVISFTCRFLLNSRVTDAAFNFLLVWYYCTLTIRESILINNGSRIKGWWVFHHYVSTFLSGVMLTWPDGLMYQKFRNQFLSFSMYQSFVQFLQYYYQSGCLYRLRALGERHTMDLTVEGFQSWMWRGLTFLLPFLFFGHFWQLFNALTLFNLARDPECKEWQVLMCGFPFLLLFLGNFFTTLRVVHQKFHSQQHGNKKD
Protein: Eukaryotic translation initiation factor 3 subunit F-1 (eIF3f-1) (Eukaryotic translation initiation factor 3 subunit 5-1) (Q9VN50)
Organism: Drosophila melanogaster (Fruit fly)
Function: Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.
Subcellular location: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_03005}.
Interaction partners:
- Eukaryotic translation initiation factor 3 subunit L
- Eukaryotic translation initiation factor 3 subunit H
- Eukaryotic translation initiation factor 3 subunit E
- Eukaryotic translation initiation factor 3 subunit I
- Eukaryotic translation initiation factor 3 subunit M
- Eukaryotic translation initiation factor 3 subunit B
- Eukaryotic translation initiation factor 3 subunit C
- Eukaryotic translation initiation factor 3 subunit K
- Eukaryotic translation initiation factor 3 subunit A
- Small ribosomal subunit protein uS2
Sequence:
MSALNLTVRVHPVVLFQVVDAFERRNADSHRVIGTLLGSVDKGVVEVTNCFCVPHKEHDDQVEAELSYALDMYDLNRKVNSNESVVGWWATGNDVTNHSSVIHEYYARECNNPVHLTVDTSLQGGRMGLRAYVCIQLGVPGGKSGCMFTPIPVELTSYEPETFGLKLLQKTVGVSPAHRPKTVPPMLDLAQISEASTKLQSLLDLILKYVDDVIAHKVTPDNAVGRQLLDLIHSVPHMTHEQFTQMFNANVRNLLLVITLSQLIKTQLQLNEKLTFLPTA
Protein: Tryptophan RNA-binding attenuator protein inhibitory protein (Anti-TRAP protein) (AT) (O31466)
Organism: Bacillus subtilis (strain 168)
Function: By forming a complex with tryptophan-activated TRAP, and masking its RNA binding site, it inhibits TRAP's RNA binding ability, thereby abolishing TRAP regulation of gene expression, leading to antitermination and increased trp operon expression. AT acts by competing with messenger RNA for the RNA binding domain of TRAP.
Subcellular location: Cytoplasm {ECO:0000305}.
Interaction partners:
- Transcription attenuation protein MtrB
- Chaperone protein DnaK
- Uncharacterized transporter YcbK
- Polyketide synthase PksJ
- Chaperone protein HtpG
- Protein GrpE
- Chaperonin GroEL
- Peptidyl-prolyl cis-trans isomerase B
- tRNA modification GTPase MnmE
- Polyketide synthase PksN
Sequence:
MVIATDDLEVACPKCERAGEIEGTPCPACSGKGVILTAQGYTLLDFIQKHLNK
Protein: AGAMOUS-like 54 (F15P11.1 protein) (MADS-box protein AGL54) (Q9S9U2)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Subcellular location: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
Interaction partners:
Sequence:
MDSSTSTKKNTKLFVRNQTCFKKSSLSSSNAKKTTNLSMREQTMFKKALELSTLCDIEVCVIYYGRDGKLIKTWPEDQSKVRDMAERFSRLHERERCKKRTNLSLFLRKQILHDKKLSEKVLEMEDSLESGLRVLQDKLLLLQPEKNQTELGQSCAVYSTTYPLSSPSLIEDHQHQQQWTEPLSNTE
Protein: NLRC3 (NOD3 protein, isoform CRA_c) (C3VPR7)
Organism: Homo sapiens (Human)
Subcellular location: Cytoplasm {ECO:0000256|ARBA:ARBA00004496}.
Interaction partners:
Sequence:
MRKQEVRTGREAGQGHGTGSPAEQVKALMDLLAGKGSQGSQAPQALDRTPDAPLGPCSNDSRIQRHRKALLSKVGGGPELGGPWHRLASLLLVEGLTDLQLREHDFTQVEATRGGGHPARTVALDRLFLPLSRVSVPPRVSITIGVAGMGKTTLVRHFVRLWAHGQVGKDFSLVLPLTFRDLNTHEKLCADRLICSVFPHVGEPSLAVAVPARALLILDGLDECRTPLDFSNTVACTDPKKEIPVDHLITNIIRGNLFPEVSIWITSRPSASGQIPGGLVDRMTEIRGFNEEEIKVCLEQMFPEDQALLGWMLSQVQADRALYLMCTVPAFCRLTGMALGHLWRSRTGPQDAELWPPRTLCELYSWYFRMALSGEGQEKGKASPRIEQVAHGGRKMVGTLGRLAFHGLLKKKYVFYEQDMKAFGVDLALLQGAPCSCFLQREETLASSVAYCFTHLSLQEFVAAAYYYGASRRAIFDLFTESGVSWPRLGFLTHFRSAAQRAMQAEDGRLDVFLRFLSGLLSPRVNALLAGSLLAQGEHQAYRTQVAELLQGCLRPDAAVCARAINVLHCLHELQHTELARSVEEAMESGALARLTGPAHRAALAYLLQVSDACAQEANLSLSLSQGVLQSLLPQLLYCRKLRLDTNQFQDPVMELLGSVLSGKDCRIQKISLAENQISNKGAKALARSLLVNRSLTSLDLRGNSIGPQGAKALADALKINRTLTSLSLQGNTVRDDGARSMAEALASNRTLSMLHLQKNSIGPMGAQRMADALKQNRSLKELMFSSNSIGDGGAKALAEALKVNQGLESLDLQSNSISDAGVAALMGALCTNQTLLSLSLRENSISPEGAQAIAHALCANSTLKNLDLTANLLHDQGARAIAVAVRENRTLTSLHLQWNFIQAGAAQALGQALQLNRSLTSLDLQENAIGDDGACAVARALKVNTALTALYLQVASIGASGAQVLGEALAVNRTLEILDLRGNAIGVAGAKALANALKVNSSLRRLNLQENSLGMDGAICIATALSGNHRLQHINLQGNHIGDSGARMISEAIKTNAPTCTVEM
Protein: GON-4-like protein (Gon-4-like (C. elegans)) (F1QI87)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Subcellular location: Nucleus {ECO:0000256|ARBA:ARBA00004123, ECO:0000256|PROSITE-ProRule:PRU00810}.
Interaction partners:
- Ras association domain family member 11.
- Cramped chromatin regulator homolog 1.
Sequence:
MGWKRKSSSPEPQPNLVKLPKRESLSRSPSSWKRKASTPSKTKSWTSIQSLSPDRHVDQCNGQEKMSSAGHVEDDSDCIQSSTPVSSPLRSEEDAELGLVITVDEDRCEGEEWLKKRNGVNIKKNGINQTEGEIPQKEDGDVEKTMEQLSEEDENEEELRKLDRDLTLKSKKLNLSSINVRNIIHEVVTNEHVVAMMKAAIKETQDMPMFEPKMTRSKLKEAVEKGVGMGNWNISPIKKANDIKPPQFVDIPLQEEEDSSDEEYCPDEDEEDETAEETFLESDVESTSSSPRGIRRFPSQTPPHCDDASNSPRLKPRLARHLRVEAVPMGPPAPPPQSCGLSRSLKTLDPFIEKLHAVDKELELSPLCMEPYQALSSGGAGEPDDSLVACRTRSKRPLRDVPLDQLEAELRAPDITPDMYDNVSTPEDREWTQWLQGLMTSHLDNDEEADEDDDPEYNFLDDLDEPDLEDYRNDRAVRITKKEVNELMEELFETFHDELAANEPDDEGHDEDEEREEEANDTPQFNVPQAIRFEEPLAHMLTACRRTVREQLDALQQRRENQVRTTQHASGPGMVFVQPSCPLVVTPAQRIQLQQQIQQHVQLLTQVSMLCDPVGALQTEAQTTKHFLGELLSFAERAEEERSAVNLGFKSVFRVCNLLSSINLLEEVKQSPSLSCLPPKPNRHHSVHSYPLLPAGLAWLFATRSVFLYPELLPHCSLDPALHPSRSKHYYSKGEDGLLVLGLKHFAQTEFPYQLISRYLIRPKRQEQLRMRVKDMVSPKYPHNIIKYYCQNHVVPPLPVVCKPVVHGEERPPVEREQEVMPNWLKKSLPLIQKSICQSDLTMTSTTKSASLPFPKETRYPQFLPKGLSLRLHPSQVASRPSQPKSRILRAFTNRTLAPLAKAPSCPTGTGHLLTNISTPVLLLAQAPSTPINGVFPLVHPSLTPAHGTVPLNASYPINFHYLSPELGASNPAHLPANLPPSVVQKPQCDVPLLSTGTVKTHGVQQQTSDKHKKRTMPRKLAPLRPAPQLPRLLPLSSGSIGNISNPGIIIDQQISLNVPHNLQSDNVIVIKAHENVNTHRTVPSLSPDLVVQLVPQTQVAENTTSSLPRKTTPRSDVSQTAKDIPSVQSSGENGQRTVFSPQTAAPAAVDSSQFVLVQTVSPTGPPQFLLLPQDSLVLNQPASLPSEGTLQNLSQQTSHLDISTTSTALKNSEKTEVHLNNPTTSLPVSREEDGERQEVDEEMVGDRWEEEMASALFGSPLLALSESSCSPDSSPDASMDSGSDAMVRVEMEDGELPSVHSASATQETPDVHKHSSGDEKEQQSSGGEKQNSGNEEGRAEESESRKDEAQDEDKGGEKNEDGEGDGKRDEGGSGDKGREEKDGDGEKDGDGERDEEEEDFDDLTQDEDEEEVMSSASEESVLSVPELQETMEKLTWLASERRLCREGDSEEDNSPTSPTSPTSPNSQNSPASQNSQEENSEDEDDGAMKGDELEAGEGEGEKLPEGDAPAGDDPPQISEKVGGRGRGRGRPPPRSLKRGRRQERGSKDASKLLLLYDDHILDNDPMRESKDMAYAQAYLNRVREALQDVPGKVEEFLGLLYEFDQAGESHSVIELFAQLKQLLKDWPELLKDFAAFLLPEQALECGLFEEQQAFERSRRFLRQLEISFGENPSHYQKIVRALQSGSPLSPAGIEELKTQMATLLKGHTHLQGEFWMFFDEMRPPPARPGQFEEAVWPEDVATGTDGEAGVSVTSRGGVWGGFEEVTLPDLDEDEESHKIRQISSRSKRRKELHTYKDCDWPEKDCSCSCHDSVHDAKHRRHKRKGCLRCQSNKAANGSKVLKGRDSAFSSADAQSERGGEEKEEERVLGEDGEAEKELKDETGSGANSPHHDGEGSVWEREERATSSIPEEQNTHNQDDEEKTEEKNHHASPEKHSRDEEDSAESGQTEAAQQSSLSPALDAPVCAKNISLTPTGERVILWTREADRVILTTCQQQGASQSTFQAVSEQLGNKTASEVSRRFRDLMRLFHTSASQASSEDEAAEQQSATDEEQD
Protein: Uncharacterized protein (G8BK70)
Organism: Candida parapsilosis (strain CDC 317 / ATCC MYA-4646) (Yeast) (Monilia parapsilosis)
Interaction partners:
Sequence:
MRYFGCLLLLATSAFANFDLFKRDDCNKMNIAACRDAIRIKETNCDMYDNDSDYESDTEQEFYAKIQEDRCECSLDDEYYVKWSQCAKECGARVELQPELLKSSVCSKASRVPPNSQFANYVSSMDRVGTPAWSRTTDSSSSRNADSSSSQVASSTSDSGSSSEESSGSANSSSAGESTTSNGSSTSAASRTEPESTTESSSDTTDESSTDGSSSNDSATTESTTTSSESSSTNFAVTAGCGSLLSLILLSLL
Protein: Fatty acid conjugase FAC2 A (CoFac2) (EC 1.14.19.14) (CoFadX-1) (Q9FPP8)
Organism: Calendula officinalis (Pot marigold)
Function: Fatty acid conjugase converting 18:2(9Z, 12Z) to calendic acid 18:3(8E, 10E, 12Z). Converts alpha-linolenic acid (18:3(9Z, 12Z, 15Z)) into 18:4(8E, 10E, 12Z, 15Z). Also has weak activity on the mono-unsaturates 16:1(9Z) and 18:1(9Z) producing two conjugated double bonds at delta(8) and delta(10) position.
Subcellular location: Microsome membrane {ECO:0000269|PubMed:11067856}; Multi-pass membrane protein {ECO:0000255}.
Interaction partners:
Sequence:
MGKGASNKKVLERVPITKPPFEYNDLKKAVPPHCFSRPLFRSFYFLLHDIIVTCILFYVASNYIPMLPGFLSYIVWPVYWISQGVFLGRLWMIGHECGHHSFSNYRWVDDSVGFLIHTATLTPYFSFKYSHRNHHAHTNSMEYDEVHIPKRKSEALDLYFEFLGNNPMGLMITMLCKLTFGYAAYIMFNYTGKKHKSGGLASHFYPQSPLFNDSERNHVLFSDVGICIVLYACYRIVMVTGAMSAFYVYGIPWVIMSAILFAATYLQHTHPSIPHYDTTEWNWLRGALSTIDRDLGFFNMNKTHYHVIHHLFPVIPEYHAQEATEAIKPILGQYYKYDGTPFLKALWREMKDCIYVESDQGQKKQGIYWFKNKI
Protein: Clathrin heavy chain (J3KS13)
Organism: Homo sapiens (Human)
Interaction partners:
Sequence:
MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVIIDMNDPSNPIRRPISADSAIMNPASKVIALKAGKTLQIFNIEMKSKMKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQQVGDRCYDEKMYDAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFACVDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTELAILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIITMMNHPTDAWKEGQFKDIITKVANVELYYRAIQFYLEFKPLLLNDLLMVLSPRLDHTRAVNYFSKVKQLPLVKPYLRSVQNHNNKSVNESLNNLFITEEDYQALRTSIDAYDNFDNISLAQRLEKHELIEFRRIAAYLFKGNNRWKQSVELCKKDSLYKDAMQYASESKDTELAEELLQWFLQEEKRECFGACLFTCYDLLRPDVVLETAWRHNIMDFAMPYFIQVMKEYLTKVDKLDASESLRKEEEQATETQPIVYGQPQLMLTAGPSVAVPPQAPFGYGYTAPPYGQPQPGFGYSM