wanglab/gogpt-training-data huggingface dataset:
Protein: Nuclear pore complex protein (A1YK62)
Organism: Drosophila melanogaster (Fruit fly)
Subcellular location: Nucleus, nuclear pore complex {ECO:0000256|RuleBase:RU365072}. Nucleus membrane {ECO:0000256|RuleBase:RU365072}.
Interaction partners:
Sequence:
MADSPFPRSSRSGLLRTTLNSSMAPQNLSHSLLILEKSNAEQNERSLMEDTGDDLDRGKSRMDVLFPQFFDVLQAQGNGQEAFEVIQSLTQVCRGVVEQLELEIDHGMGGEQGARQRESMLTWLRQEINTWRLLHALFYDRILLQTDRQADDEMQDGPTLGGSEKEVIQQLYALNATLREYQVVVDWLEACYDRGEQQNPLHAHDRMMAWENTLFQLENLQGAAFGKGHKIVTRLDPDAPVREKRPLHALDEEDNLRLSRAIFELIRAGRVDDGLKLCKHFGQTWRAAILEGWRLHEDPNFEQNVSVLHEKLPIEGNPRRDIWKRCAWMLADSKNYDEYSRATAGVFSGHLGALKTLLHSNWHDLLWAHLKVQIDIRVESEIRGCCLKNYQPMPDDYWNGRMTMEQIFEELNVAKDASVRDFAQSQLGIIQRHLILDTCGELIQHMVRWVEKDTSQQSPHQLRFMAHIVLFLRQIGRVEQERQAEKIVAAYVEALIARGEPQLIAYYTASLSNPLQVQLYSRFLEQVEQKRPRELAVDAALQAGLDVEQITRVTVQNIRLAHQPLGEFGEPQSGEISAIDQRKISALEWLIHLPEQRGELLWQANAMIRTYLASSKVECMRQTFRMVPADIVQQLVSLYGSVDNIPPREECCLKEYLCYKAYLSGVDSFVEWNRLQQNRPKKPQTSHAASSQDNFTERMASERKEQAHRSEVVRWEHKVKEQAKQTIELLYNVLMFPDKGWLVDPFIAKLPENAVQLNWDHRLLQMEKLRSICIPEIALFLNEVMFKSGDFAGCVRLADEISSENRQLYKVYTKHKLAELLAKIADASLELLNSKLDPWGYPITT
Protein: Biogenesis of lysosome-related organelles complex 1 subunit 4 (BLOC-1 subunit 4) (Protein cappuccino homolog) (Q8VED2)
Organism: Mus musculus (Mouse)
Function: Component of the BLOC-1 complex, a complex that is required for normal biogenesis of lysosome-related organelles (LRO), such as platelet dense granules and melanosomes. In concert with the AP-3 complex, the BLOC-1 complex is required to target membrane protein cargos into vesicles assembled at cell bodies for delivery into neurites and nerve terminals. The BLOC-1 complex, in association with SNARE proteins, is also proposed to be involved in neurite extension. Plays a role in intracellular vesicle trafficking.
Subcellular location: Cytoplasm {ECO:0000269|PubMed:12576321}.
Interaction partners:
- Biogenesis of lysosome-related organelles complex 1 subunit 1
- Biogenesis of lysosome-related organelles complex 1 subunit 6
- Biogenesis of lysosome-related organelles complex 1 subunit 2
- Biogenesis of lysosome-related organelles complex 1 subunit 5
- Biogenesis of lysosome-related organelles complex 1 subunit 3
- Dysbindin
- SNARE-associated protein Snapin
- BLOC-2 complex member HPS6
- BLOC-2 complex member HPS5
- BLOC-3 complex member HPS4
Sequence:
MEEGPAVGTLSREVSTEEAEPLGAAWSGDSGHVSQSHSSASGPWDDDGPEDAPGRDLPLLRRAASGYASSLLPSAGPRPEVEALDASLEELLAKVDEFVGMLDMIRGDSSHVVGEGVPRIHAKAAEMRRIYGRIDKLEAFVRMIGSSVARMEEQVAKAEAELGTFPRAFRRLLHTISVPALFRSAPSGPQRAAYEPPVLFRTEDHFPGCGDRPQL
Protein: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (iPGM) (EC 5.4.2.12) (Cofactor-independent phosphoglycerate mutase homolog) (G5EFZ1)
Organism: Caenorhabditis elegans
Function: Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate.
Interaction partners:
- Enolase
- Probable phosphoglycerate kinase
- Triosephosphate isomerase
- Glucose-6-phosphate isomerase
- Fructose-bisphosphate aldolase 2
- Uncharacterized protein C13B9.2
- Fructose-bisphosphate aldolase 1
- Probable cleavage and polyadenylation specificity factor subunit 1
- D-3-phosphoglycerate dehydrogenase
- DUF3453 domain-containing protein
Sequence:
MFVALGAQIYRQYFGRRGMAMANNSSVANKVCLIVIDGWGVSEDPYGNAILNAQTPVMDKLCSGNWAQIEAHGLHVGLPEGLMGNSEVGHLNIGAGRVIYQDIVRINLAVKNNKFVTNESLVDACDRAKNGNGRLHLAGLVSDGGVHSHIDHMFALVKAIKELGVPELYLHFYGDGRDTSPNSGVGFLEQTLEFLEKTTGYGKLATVVGRYYAMDRDNRWERINVAYEAMIGGVGETSDEAGVVEVVRKRYAADETDEFLKPIILQGEKGRVQNDDTIIFFDYRADRMREISAAMGMDRYKDCNSKLAHPSNLQVYGMTQYKAEFPFKSLFPPASNKNVLAEWLAEQKVSQFHCAETEKYAHVTFFFNGGLEKQFEGEERCLVPSPKVATYDLQPEMSAAGVADKMIEQLEAGTHPFIMCNFAPPDMVGHTGVYEAAVKACEATDIAIGRIYEATQKHGYSLMVTADHGNAEKMKAPDGGKHTAHTCYRVPLTLSHPGFKFVDPADRHPALCDVAPTVLAIMGLPQPAEMTGVSIVQKI
Protein: Protein HSH49 (Q99181)
Organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Function: Possible SF3b-like factor.
Subcellular location: Nucleus {ECO:0000305}.
Interaction partners:
- U2 small nuclear ribonucleoprotein A'
- Cold sensitive U2 snRNA suppressor 1
- Splicing factor MUD2
- RDS3 complex subunit 10
- U1 small nuclear ribonucleoprotein A
- Pre-mRNA-splicing factor RDS3
- 66 kDa U4/U6.U5 small nuclear ribonucleoprotein component
- Protein NAM8
- Pre-mRNA-splicing factor PRP9
- Pre-mRNA-splicing helicase BRR2
Sequence:
MNYSADSGNTVYVGNIDPRITKEQLYELFIQINPVLRIKYPKDKVLQAYQGYAFIEFYNQGDAQYAIKIMNNTVRLYDRLIKVRQVTNSTGTTNLPSNISKDMILPIAKLFIKNLADSIDSDQLVKIFNKFGKLIREPEIFYLSNGKLKCAYVYFEDFEKADLAIKSLNNQLVANNRITVDYAFKENGKGNAKYGDDVDRLLNKEALKHNMLK
Protein: Epididymis secretory sperm binding protein (A0A024R693)
Organism: Homo sapiens (Human)
Subcellular location: Cytoplasm {ECO:0000256|ARBA:ARBA00004496}. Nucleus {ECO:0000256|ARBA:ARBA00004123}. Secreted {ECO:0000256|ARBA:ARBA00004613}.
Interaction partners:
Sequence:
MADNFSLHDALSGSGNPNPQGWPGAWGNQPAGAGGYPGASYPGAYPGQAPPGAYPGQAPPGAYPGAPGAYPGAPAPGVYPGPPSGPGAYPSSGQPSATGAYPATGPYGAPAGPLIVPYNLPLPGGVVPRMLITILGTVKPNANRIALDFQRGNDVAFHFNPRFNENNRRVIVCNTKLDNNWGREERQSVFPFESGKPFKIQVLVEPDHFKVAVNDAHLLQYNHRVKKLNEISKLGISGDIDLTSASYTMI
Protein: Homoaconitase, mitochondrial (EC 4.2.1.36) (Homoaconitate hydratase) (Q4WUL6)
Organism: Aspergillus fumigatus (strain ATCC MYA-4609 / CBS 101355 / FGSC A1100 / Af293) (Neosartorya fumigata)
Function: Catalyzes the reversible hydration of cis-homoaconitate to (2R,3S)-homoisocitrate, a step in the alpha-aminoadipate pathway for lysine biosynthesis.
Subcellular location: Mitochondrion {ECO:0000250}.
Interaction partners:
- homoisocitrate dehydrogenase
- Putative aconitate hydratase, mitochondrial
- Ulp1 protease family protein
- Saccharopine dehydrogenase [NADP
- GATA-type transcription factor sreA
- Citrate synthase
- Citrate synthase
- Citrate synthase
Sequence:
MFKRTGSLLLRCRASRVPVIGRPLISLSTSSTSLSLSRPRSFATTSLRRYTEASSSTTQTSPSSSSWPAPDAAPRVPQTLTEKIVQAYSLGLAEGQYVKAGDYVMLSPHRCMTHDNSWPTALKFMAIGASKVHNPDQIVMTLDHDVQNKSEKNLKKYESIEKFAKQHGIDFYPAGHGVGHQIMIEEGYAFPGTVTVASDSHSNMYGGVGCLGTPMVRTDAATIWATGRTWWKVPPIAKVQFTGTLPEGVTGKDVIVALSGLFNKDEVLNYAIEFTGSEETMKSLSVDTRLTIANMTTEWGALTGLFPIDSTLEQWLRHKAATASRTETARRFAEERINELFANPTVADRGARYAKYLYLDLSTLSPYVSGPNSVKVATPLDELEKHKLKIDKAYLVSCTNSRASDIAAAAKVFKDAVARTGGPVRVADGVEFYVAAASKAEQKIAEEAGDWQALMDAGAIPLPAGCAVCIGLGAGLLKEGEVGISASNRNFKGRMGSPDAKAYLASPEVVAASALNGVISGPGIYKRPEDWTGVSIGEGEVVESGSRIDTTLEAMEKFIGQLDSMIDSSSKAVMPEESTGSGATEVDIVPGFPEKIEGEILFLDADNISTDGIYPGKYTYQDDVTKDKMAQVCMENYDPAFSGIARAGDIFVSGFNFGCGSSREQAATSILAKQLPLVVAGSIGNTFSRNAVNNALPLLEMPRLIERLREAFGSEKQPTRRTGWTFTWNVRTSQVTVQEGPGGETWSQSVPAFPPNLQDIIAQGGLEKWVKKEISKA
Protein: Zinc transporter ZnT-1 (Q5ZPI0)
Organism: Gallus gallus (Chicken)
Interaction partners:
Sequence:
CSLEYALLGKEPGFGFGGVWVPPDNLWCPPARGRSHFWQGLQISIGNRAALTLSCASASAFFLLLSISTSVPILFLSRLPSVFMHGLPGAQKVITDLTAPS
Protein: CLAVATA3/ESR (CLE)-related protein 41 (Tracheary element differentiation inhibitory factor-like protein) (TDIF-like protein) [Cleaved into: CLE41p] (Q84W98)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Extracellular signal peptide that regulates cell fate. May act with TDR as a ligand-receptor pair in a signal transduction pathway that represses tracheary element differentiation but promotes the formation of procambial cells adjacent to phloem cells in the veins in an auxin-dependent manner. Regulates the transition of protophloem cells from proliferation to differentiation, thus impinging on postembryonic growth capacity of the root meristem; this signaling pathway requires CRN and CLV2.
Subcellular location: [CLE41p]: Secreted, extracellular space {ECO:0000269|PubMed:18812507}. Note=Probably secreted from the phloem cells and distributed in the procambial region. {ECO:0000269|PubMed:18812507}.
Interaction partners:
- Leucine-rich repeat receptor-like protein kinase TDR
- Somatic embryogenesis receptor kinase 2
- WUSCHEL-related homeobox 4
- CLAVATA3/ESR
- CLAVATA3/ESR
- Protein CLAVATA 3
- WUSCHEL-related homeobox 14
- CLAVATA3/ESR
- CLAVATA3/ESR
- Receptor protein kinase CLAVATA1
Sequence:
MATSNDQTNTKSSHSRTLLLLFIFLSLLLFSSLTIPMTRHQSTSMVAPFKRVLLESSVPASSTMDLRPKASTRRSRTSRRREFGNDAHEVPSGPNPISN
Protein: NACHT, LRR and PYD domains-containing protein 10 (Q8CCN1)
Organism: Mus musculus (Mouse)
Function: Inhibits autoprocessing of CASP1, CASP1-dependent IL1B secretion, PYCARD aggregation and PYCARD-mediated apoptosis but not apoptosis induced by FAS or BID (By similarity). Displays anti-inflammatory activity (By similarity). Required for immunity against C.albicans infection. Involved in the innate immune response by contributing to pro-inflammatory cytokine release in response to invasive bacterial infection (By similarity). Contributes to T-cell-mediated inflammatory responses in the skin. Plays a role in protection against periodontitis through its involvement in induction of IL1A via ERK activation in oral epithelial cells infected with periodontal pathogens (By similarity). Exhibits both ATPase and GTPase activities (By similarity).
Subcellular location: Cytoplasm {ECO:0000250|UniProtKB:Q86W26}. Cell membrane {ECO:0000250|UniProtKB:Q86W26}; Peripheral membrane protein {ECO:0000305}. Note=Cytoplasmic protein which is recruited to the cell membrane by NOD1 following invasive bacterial infection. {ECO:0000250|UniProtKB:Q86W26}.
Interaction partners:
- NLR family CARD domain-containing protein 4
Sequence:
MALARANSPQEALLWALNDLEENSFKTLKFHLRDVTQFHLARGELESLSQVDLASKLISMYGAQEAVRVVSRSLLAMNLMELVDYLNQVCLNDYREIYREHVRCLEERQDWGVNSSHNKLLLMATSSSGGRRSPSCSDLEQELDPVDVETLFAPEAESYSTPPIVVMQGSAGTGKTTLVKKLVQDWSKGKLYPGQFDYVFYVSCREVVLLPKCDLPNLICWCCGDDQAPVTEILRQPGRLLFILDGYDELQKSSRAECVLHILMRRREVPCSLLITTRPPALQSLEPMLGERRHVLVLGFSEEERETYFSSCFTDKEQLKNALEFVQNNAVLYKACQVPGICWVVCSWLKKKMARGQEVSETPSNSTDIFTAYVSTFLPTDGNGDSSELTRHKVLKSLCSLAAEGMRHQRLLFEEEVLRKHGLDGPSLTAFLNCIDYRAGLGIKKFYSFRHISFQEFFYAMSFLVKEDQSQQGEATHKEVAKLVDPENHEEVTLSLQFLFDMLKTEGTLSLGLKFCFRIAPSVRQDLKHFKEQIEAIKYKRSWDLEFSLYDSKIKKLTQGIQMKDVILNVQHLDEKKSDKKKSVSVTSSFSSGKVQSPFLGNDKSTRKQKKASNGKSRGAEEPAPGVRNRRLASREKGHMEMNDKEDGGVEEQEDEEGQTLKKDGEMIDKMNG
Protein: Heparan sulfate glucosamine 3-O-sulfotransferase 3A1 (EC 2.8.2.23) (Heparan sulfate D-glucosaminyl 3-O-sulfotransferase 3A1) (Heparan sulfate 3-O-sulfotransferase 3A1) (Q8BKN6)
Organism: Mus musculus (Mouse)
Function: Sulfotransferase that utilizes 3'-phospho-5'-adenylyl sulfate (PAPS) to catalyze the transfer of a sulfo group to an N-unsubstituted glucosamine linked to a 2-O-sulfo iduronic acid unit on heparan sulfate. Catalyzes the O-sulfation of glucosamine in IdoUA2S-GlcNS and also in IdoUA2S-GlcNH2. Unlike HS3ST1/3-OST-1, does not convert non-anticoagulant heparan sulfate to anticoagulant heparan sulfate (By similarity).
Subcellular location: Golgi apparatus membrane {ECO:0000305}; Single-pass type II membrane protein {ECO:0000305}.
Interaction partners:
- Heparan sulfate glucosamine 3-O-sulfotransferase 3B1
Sequence:
MAPSGPTGAQPSPAEPLSRSIFRKFLLMLCSLLTSLYVFYCLAERCPPGSGPVAGVPGRGVPAGPRELAMWPAGAPRKRLLQLRQRRRRGRSGPGDSSDQEEQSPGLAAAPGGSGAGSSVAEAQPGTLALLLDEGSKQLPQAIIIGVKKGGTRALLEFLRVHPDVRAVGAEPHFFDRSYHKGLAWYRDLMPRTLEGQITMEKTPSYFVTREAPARISAMSKDTKLIVVVRDPVTRAISDYTQTLSKRPDIPSFESLTFRNRSAGLIDTSWSAIQIGLYAKHLEPWLRHFPLGQMLFVSGERLVSDPAGELRRVQDFLGLKRIITDKHFYFNQTKGFPCLKKAEGSGKPHCLGKTKGRAHPTIAREVLRQLRDFYRPFNRKFYQMTGRDFGWDG
Protein: Plastid-encoded RNA polymerase subunit alpha (Q580S5)
Organism: Trypanosoma brucei brucei (strain 927/4 GUTat10.1)
Interaction partners:
- DNA-direcetd RNA polymerase II, subunit 9, putative
- Transcription initiation protein, putative
- RNA polymerase-like protein
- DNA-directed RNA polymerases I, II, and III subunit RPABC3
- DNA-directed RNA polymerases I, II, and III subunit RPABC5
- DNA-dependent RNA polymerases, putative
- Spt4/RpoE2 zinc finger domain-containing protein
- DNA-directed RNA polymerase II, putative
- DNA-directed RNA polymerase subunit beta
- Probable DNA-directed RNA polymerases I, II, and III subunit RPABC2
Sequence:
MKVTIVDCKRHEHSAGETLVFKLNEVDNSFANGLRRVLLAEVPVLGVESVTIIQNTSVLPDEMIAHRIGLVPLYSKRAKQMQFFHDCLCGGTGCIECQITGELKVRCPSNQHSLQVFADSLKIDDEGVYPVSSEERGVWLLTLGRSQEINLRVLIRKSIAKTHAKFMPVSTVSMRYEPEVILNKDVISSLDPEQLRQWMRSCVHRPHSIAESNGEGHTGHIDVNKLCEECLLKEPSVVSFTEPLVFARPKKDARGHYNFTFTVETTGVLPVLQLIRDAVDVLRRKLQRVHECLTERVVPGDLVETRPIGDAPTAPVVVNEDIMDTKGAEDDLKFVMN
Protein: Zinc finger protein mex-6 (Q09436)
Organism: Caenorhabditis elegans
Function: Functions with mex-5 to affect embryonic viability, establish soma germline asymmetry in embryos and establish plk-1, pie-1, mex-1, and pos-1 asymmetry in embryos. Also affects formation of intestinal cells.
Subcellular location: Cytoplasm {ECO:0000250|UniProtKB:Q9XUB2}.
Interaction partners:
- K Homology domain-containing protein
- Pharynx and intestine in excess protein 1
- PIP-1
- Zinc finger protein mex-5
- Protein tyrosine phosphatase-like protein egg-3
- CCCH-type zinc finger protein oma-2
- Zinc finger-interacting factor 1
- Dual specificity tyrosine-phosphorylation-regulated kinase mbk-2
- RNA-binding protein pos-1
- Chondroitin proteoglycan 1
Sequence:
MTATSNSAPLAGGSLSSSATAQPPQPPPGHQQQHPLPQIYDSQMQYYYGSSMPNQPIPTYTAQNGAPQQFGTPPYYQDANGQFGQVPAQQQMMTAGHPYFYMAQPQQGGQHVAQSGQPQIFYYQQPLGQMAQQAAPMYFHPMQAASTPMLSEQMSMMPQIQSTNPQQSEQLRKSGAQISTTRTVPLTSSTPLPTSREYETVQRDRNRNSQSRYQCPIEHDDLPIDEISKITIDNHNDDTMSAEKENRFNKNRVEKLGRRGFAKPEVDSQLPHNFKTRLCMTHAAGINPCALGARCKFAHGLKELRASDIPTRYPNNKYKTKLCKNFARGGSGVCPYGLRCEFVHPSDTEFQNIPPYQRKMVEEHDSIPEDYVVARYQPRFMHTSGKATTPTKVTLKQRNVAGSMMCLSNTGRDLEAGGDFNHPEINENDLPPHLRRIRRGNPPVTRSRPSFSTKWTSVENLGLRGHY
Protein: Mr19,000 outer arm dynein light chain (O04355)
Organism: Chlamydomonas reinhardtii (Chlamydomonas smithii)
Interaction partners:
- Uncharacterized protein
- Dynein light chain 9
- Dynein light chain
- Dynein light chain
- Dynein light chain
- Dynein light chain roadblock
- Dynein light chain roadblock
- Uncharacterized protein
- Uncharacterized protein
- PLD phosphodiesterase domain-containing protein
Sequence:
MDDMPFQSGGIKEVVYENTFITDPEGYGPNTKFERHKVQAVLKQVLKERIEKQKYDPVKGAQISKQLADDLREKVKALGYDRYKLVIQVTVGQKQGQAMRIISRCLWDQTNDNFASEYYENESMYCVCQVYGLYYE
Protein: C-type lectin 37Da (Q59DY6)
Organism: Drosophila melanogaster (Fruit fly)
Function: Galactose-specific lectin that displays calcium-dependent activity. Binds to the surface of hemocytes and enhances hemocyte encapsulation and melanization. This is likely by interacting with carbohydrates on the surface of the hemocytes. Also displays agglutination activity against the Gram-negative bacterium E.coli.
Subcellular location: Secreted {ECO:0000269|PubMed:16475980}.
Interaction partners:
Sequence:
MLKTLVQLFLVVAGFAPGFGYDKYTTHIQNGNPYNLTVDMTPFIKINESYYVFGQTKVNWYVAYENCRRLQSELVTFETAEEFDAIAAFLNARGDRSEHWTSGNDLGKTGTHYWFSNAQLVTIKRWAPKQPDNAGGREHCIHLGYIYGYSTEFQLNDRPCHNHASSLFKYICEAPKQETVSIVVWK
Protein: Myosin-1 (Class I unconventional myosin) (Type I myosin) (Q00647)
Organism: Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) (Aspergillus nidulans)
Function: Type-I myosin implicated in the organization of the actin cytoskeleton. Required for proper actin cytoskeleton polarization. At the cell cortex, assembles in patch-like structures together with proteins from the actin-polymerizing machinery and promotes actin assembly. Functions as actin nucleation-promoting factor (NPF) for the Arp2/3 complex (By similarity). Plays an important role in polarized growth, spore germination, hyphal morphogenesis, and septal wall formation.
Subcellular location: Cytoplasm, cytoskeleton, actin patch {ECO:0000269|PubMed:10658211, ECO:0000269|PubMed:7860631}. Note=Localizes to cortical patch-like structures. Enriched at sites of polarized growth, like the growing hyphal tips and sites of septum formation.
Interaction partners:
- Calmodulin
- Actin associated protein Wsp1
- Proline-rich, actin-associated protein Vrp1, putative
- Calmodulin
- Elongation factor 3
- Probable endopolygalacturonase D
- rRNA-processing protein cgrA
- Actin cytoskeleton organization protein
- Elongator complex protein 4
- mRNA-nucleus export ATPase
Sequence:
MGHSRRPAGGEKKSRFGRSKAAADVGDGRQAGGKPQVRKAVFESTKKKEIGVSDLTLLSKISNEAINDNLKLRFQHDEIYTYIGHVLVSVNPFRDLGIYTDSVLNSYRGKNRLEVPPHVFAVAESAYYNMKSYKDNQCVIISGESGAGKTEAAKRIMQYIASVSGGSDSSIQQTKDMVLATNPLLESFGNAKTLRNNNSSRFGKYLELEFNAQGEPVGANITNYLLEKSRVVGQITNERNFHIFYQFAKGAPQKYRDSFGVQQPQSYLYTSRSKCFDVPGVDDVAEFQDTLNAMSVIGMSEAEQDNVFRMLAAILWMGNIQFAEDDSGNAAITDQSVVDFVAYLLEVDAGQVNQALTIRMMETSRGGRRGSVYEVPLNTTQALAVRDALAKAIYFNLFDWIVGRVNQSLTAKGAVANSIGILDIYGFEIFEKNSFEQLCINYVNEKLQQIFIQLTLKAEQDEYEREQITWTPIKYFDNKVVCSLIEDKRPPGVFAALNDACATAHADSGAADNTFVGRLNFLGQNPNFENRQGQFIIKHYAGDVSYAVQGMTDKNKDQLLKDLLNLVQSSSNHFVHTLFPEQVNQDDKRRPPTASDKIKASANDLVATLMKAQPSYIRTIKPNDNKAPKEFNESNVLHQIKYLGLQENVRIRRAGFAYRQTFDKFVERFYLLSPKTSYAGDYTWTGDVETGARQILKDTRIPAEEYQMGITKVFIKTPETLFALEAMRDRYWHNMAIRIQRAWRNYLRYRTECAIRIQRFWRRMNGGLELLKLRDQGHTILGGRKERRRMSILGSRRFLGDYVGISNKGGPGEMIRSGAAISTSDDVLFSCRGEVLVSKFGRSSKPSPRIFVLTNRHVYIVSQNFVNNQLVISSERTIPIGAIKTVSASSYRDDWFSLVVGGQEPDPLCNCVFKTEFFTHLHNALRGQLNLKIGPEIEYNKKPGKLATVKVVKDGSQVDSYKSGTIHTGPGEPPNSVSKPTPRGKQVAARPVTKGKLLRPGGPGGGPSKLASRPVPERRPIPQPTPQTAAAQPTPASRPVPQPVAAVAASHSRTSSTASARAPPPPPPAPPAAAGPKKAKALYDFSSDNNGMLSISAGQIVEIVSKEGNGWWLCMNLETSAQGWTPEAYLEEQVAPTPKPAPPPPPPVAPRASPAPVNGSAAVAAAKAKAAPPPPAKRPNMAGRKTAPAPPPAPRDSAVSMNSQGDSSGASGRGTPSSVSNASLAGGLAEALRARQSAMQGKQDDDDDW
Protein: Terephthalate 1,2-dioxygenase, terminal oxygenase component subunit beta 2 (TPADO terminal oxygenase component) (EC 1.14.12.15) (TER dioxygenase system) (TERDOS) (Terephthalate 1,2-dioxygenase small subunit 2) (Q3C1D4)
Organism: Comamonas sp
Function: Component of the terephthalate 1,2-dioxygenase multicomponent enzyme system which catalyzes the dioxygenation of terephthalate (TER/TPA) to 1,2-dihydroxy-3,5-cyclohexadiene-1,4-dicarboxylic acid (DCD). It can also use 2,5-dicarboxypyridine (PDC) and 1,4-napthalenedicarboxylic acid (NDC) as substrates, and preferentially uses NADPH which is the physiological electron donor.
Interaction partners:
Sequence:
MINEIQIAAFNAAYAKTIDSDAMEQWPTFFTKDCHYCVTNVDNHDEGLAAGIVWADSQDMLTDRISALREANIYERHRYRHILGLPSIQSGDATQASASTPFMVLRIMHTGETEVFASGEYLDKFTTIDGKLRLQERIAVCDSTVTDTLMALPL
Protein: Serine/threonine-protein kinase ppk13 (EC 2.7.11.1) (Q10078)
Organism: Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Subcellular location: Endoplasmic reticulum {ECO:0000269|PubMed:16823372}. Golgi apparatus {ECO:0000269|PubMed:16823372}.
Interaction partners:
Sequence:
MQNLWKNALDTLSPYISNLFDNDVVCINNERYRIQKLLGEGGFAFVYLVQNVSNEKLYALKKIKCSFGNKGIKKAMKEADYHRKFKSNYLLKSYTHQLVKEADGSEFVYILFPYFAKGSVAQVIRNCDIEGSYISEKRILVWCSCLCKALQYLHENVAGDSPKQPEVNDLIMFDEPQVPQNTSNNNLVSYIHGDIKPDNLLLHENSREIVLTDFGSICLVPIFASNNSEAIAIQDKASENCTMPFRAPELFHVKAGSTITEKADIWSFGCTLYTIMFHASPFEREVSQGGSLALAVCNAQYSFPRKHPYSTLLCEIVEACLQREPNKRPSARELLSKIDLQINQ
Protein: Delta-6 fatty acyl desaturase (D2Y362)
Organism: Salmo salar (Atlantic salmon)
Subcellular location: Membrane {ECO:0000256|ARBA:ARBA00004141}; Multi-pass membrane protein {ECO:0000256|ARBA:ARBA00004141}.
Interaction partners:
Sequence:
DAFSAFHPDPNFVRKFLKPLLIGELAPTEPSQDQGKNAALVQDFQALRDHVESEGLLRARLLFFSLYLGHILLLEALALGLLWVWGTSWSLTLLCSLMLATSQSQAGWLQHDFGHLSVFKKSSWNHVLQKFVIGHLKGASANWWNHRHFQHHAKPNVFSKDPDVNSLHVFVLGDKQPVEYGIKKLKYMPYHHQHQYFFLIGPPLLIPVYFHIQILRTMFLRQDWVDLAWSMSFYLRFFCCYYPFFGFFGSVALISFVRFLESHWFVWVTQMNHLPMEMD
Protein: Capricious, isoform E (A0A0S0WP14)
Organism: Drosophila melanogaster (Fruit fly)
Interaction partners:
Sequence:
MSRRRAITMSLAPHLGQAFSLCLCLCLCLVLATLPVALGLANCPNGCECDDDTLMVNCGEGTLDVLPIALNPAIQRLVIKNNKLKTIDSSMQFYAQLTFLDLSFNDMLTIPERSFAYHAKLQELHLDHNKIGQVSNKTFLGLSTISVLNLRGNLIAELEYRTFSPMVKLAELNLGQNRISHIDPHALDGLDNLRVLYLDDNTLTTVPGELTFQALHSLAELYLGTNSFMTIPGGAFQDLKGLTRLDLRGAGLHNISGDALKGLVSLRFLDLSDNRLPAIPTAAFQRLGRLEQLNIGQNDFEVISSGAFSGLRELRHLELTGAQRLRRVESGAFSGNTNLEHLNLSSNKQLNELSSIALGGLPHLSTVVLKANQLSSLDEGLVPWADLQTLDLSENPFECDCRLLWLRHLLVSRNASGQYAPVICAYPTALRDLPLAHLAEPLLGCAHGAASKQAIIGILVVACAALITTLALVLYTCRHRIREMLKGHSALGRKEREYQKTFSDEEYMSRPPPGGGGVHPAAGGYPYIAGNSRMIPVTELXLEAPPPPQLRGRGGGGGASTASGAVQQLQVPSAVDQASNSFAQLSHIHYMTNNGQQQQAQQQQSTSKMHHSQQDMRLLACNGGKPLNATSLPRHRPPVVQESTLSHYSQPLANGIRLTQDHFNHNQNQSHNQHYGGVYAKPCDAMSEPGYIHNNSHYSLPLDHDLPPSPTPTPPPPALPLRNGVGMALIHGNTTGRRSFNNNNNVSTLSNNNHHGIGGGVGVAVGGTVGNNNGSLRRYHXYPAKTCGTLGRTIIKTRPDPDIELHYFYKG
Protein: Lysine-specific demethylase JMJ25 (EC 1.14.11.65) (Jumonji domain-containing protein 25) (AtJMJ25) (Protein JUMONJI 25) (Lysine-specific histone demethylase JMJ25) (Protein INCREASE IN BONSAI METHYLATION 1) ([histone H3]-dimethyl-L-lysine(9) monodemethylase JMJ25) (Q9SSE9)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Histone demethylase that demethylates 'Lys-9' (H3K9me) of histone H3 with a specific activity for H3K9me2 and H3K9me1. No activity on H3K9me3, H3K4me3/2/1, H3K27me3/2/1 and H3K36me3/2/1. Counteracts the DNA methylation of endogenous genes. Involved in the control of several developmental processes by protecting genes from silencing. Demethylates H3K9me2 in the promoter regions of RDR2 and DCL3 and mediates the repression of ectopic non-CpG methylation at RDR2, DCL3 and APC13 loci. Protects also a large number of transcribed genes from non-CpG methylation. May regulate gene expression via a pathway involving indirect silencing of gene expression through small RNA-directed DNA methylation (RdDM)-directed repression. Modulates stomatal development by regulating the methylation-mediated silencing of ERECTA receptor genes (e.g. ER, ERL1 and ERL2) and preventing cell divisions.
Subcellular location: Nucleus {ECO:0000255|PROSITE-ProRule:PRU00768, ECO:0000269|PubMed:20834229, ECO:0000269|PubMed:22772985}.
Interaction partners:
- DNA
- Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4
- Anaphase-promoting complex subunit 13
- DNA
- Histone H3.3
- Histone H3-like 3
- Histone H3-like 5
- Histone H3-like 2
- Histone H3-like 4
- Histone H3-like centromeric protein CENH3
Sequence:
MDSVEEEGVVRVEEENGRGGLRRHRRVSTKLANYVDPPTDDEEDGGPKRKGKRGGNRAPKKTPKKDEEMQKNEIDEANRVTGLVKEKRAATKILNRKDSIIEVGEASGSMPKEVKGIRIGKRKGEIDGEIPTKPGKKPKTTVDPRIIGYRPDNMCHQCQKSDRIVERCQTCNSKRYCHPCLDTWYPLIAKEDVAKKCMFCSSTCNCRACLRLDTKLKGINSNLIVSEEEKVQASKFILQSLLPHLKGINDEQVAEKEVEAKIYGLKFEEVRPQDAKAFPDERLYCDICKTSIYDLHRNCKSCSFDICLSCCLEIRNGKALACKEDVSWNYINRGLEYEHGQEGKVIEKPANKLDDKLKDKLDGKPDDKPKGKPKGRPKGKPDDKPKGKLKGKQDDKPDDKPDEKPVNTDHMKYPSLWKANEAGIITCCCGAGELVLKRLLPDGWISELVNRVEKTAEAGELLNLPETVLERCPCSNSDRHIDIDSCNLLKAACREGSEDNYLYSPSVWDVQQDDLKHFQHHWVKGEPVIVRNVLEATSGLSWEPMVMHRACRQISHVQHGSLKDVVAVDCLDFCEVKVNLHEFFTGYTDGRYDRMGWPLVLKLKDWPPAKVFKDNLPRHAEEFLCSLPLKHYTHPVNGPLNLAVKLPQNCLKPDMGPKTYVASGFAQELGRGDSVTKLHCDMSDAVNILTHISEVPNMQPGIGNLKKKHAEQDLKELYSSVANKEEMMEILENSRQQVQNVETDDGALWDIFRREDIPKLESYIEKHHKEFRHLYCCPVSQVVHPIHDQNFYLTRYHIMKLKEEYGIEPWTFNQKLGDAVLIPVGCPHQVRNLKSCNKVALDFVSPENVSECLRLTKQYRLLPPNHFAKEDKLGVKKMIVHAVDKALRDLSGEKSPEPEEKKQNMRGPKKGAAKAVAKALKDLSPSEKKSSEAAEEEISNGIVNAIDKGLKDLPPSEEKSSEAKVEISNGIVSAMDKDLEHISSSEKKSTEEEGVKRPNIVRTYERRKKLGSEVTNAYIDRLEMEKM
Protein: Cellular retinaldehyde-binding protein a (Retinaldehyde-binding protein 1a) (Q6PC74)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Interaction partners:
Sequence:
MAATGSFRMVSEEEQALRAKLEHLTVKDHGPVYGPCMKLPDHTKQKAKDELNETDEKRASAIKELRAMIKDKAGQGDEVAKTVQDKFGKEPDSLLLRFIRARKFDVARAHELMKGYVRFRRDYPELFENLTPEAVRSTIEAGYPRILSTRDKNGRVVLLFNIDNWDLEEVTFDETLRAYCVILEKLLENEETQINGFVLIENFKGFTMQHASGIKHTELKKMVDMLQDSFPARFKAVHVIHQPWYFTTTYNVVKPFMKSKLLERVFVHGDELDGYLRDFGAEILPPDFDGTGPACDGRETAIKLFGSEDTAL
Protein: Uncharacterized protein (Q8BXT7)
Organism: Mus musculus (Mouse)
Interaction partners:
Sequence:
MPGAKEQAALAESGDEEPGDPRLRLLGTFVARSLRPAAGTWERCAGTAEAGRLLQAFLDHNAASDPRPLLVVQSGPGGLVVTPGLDAGPEPSRARAKGLFFLRTKSEPPGNHSLRGTVLCGDLPAVPLEHLAPLLSEVIIPVLANEKNHLEWPHMVCQDIRHHAHTLKSDLLVIFEHMKGRTLLPLPVGSEKLEFVDGHSEPV
Protein: Tachykinin-related peptide 2 (TKRP-2) (P86576)
Organism: Nezara viridula (Southern green stink bug) (Cimex viridulus)
Subcellular location: Secreted {ECO:0000269|PubMed:19084564, ECO:0000305}.
Interaction partners:
Sequence:
APAAGFFGMR