wanglab/gogpt-training-data huggingface dataset:
Protein: Large ribosomal subunit protein uL11y (60S ribosomal protein L12-2) (ABI1-binding protein 11) (Q9LFH5)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Binds directly to 26S ribosomal RNA.
Interaction partners:
- Large ribosomal subunit protein eL31x
- Large ribosomal subunit protein uL18y
- Large ribosomal subunit protein eL31z
- Large ribosomal subunit protein eL31y
- Ubiquitin-ribosomal protein eS31y fusion protein
- Large ribosomal subunit protein eL38z/eL38y
- Large ribosomal subunit protein uL5y/uL5x/uL5w
- Small ribosomal subunit protein uS14z/uS14y/uS14x
- Large ribosomal subunit protein uL22y
- Large ribosomal subunit protein uL23y
Sequence:
MPPKLDPSQIVDVYVRVTGGEVGAASSLAPKIGPLGLAPKKIGEDIAKETAKEWKGLRVTVKLTVQNRQAKVTVVPSAAALVIKALKEPERDRKKVKNIKHNGNISFDDVTEIARIMRPRSIAKELSGTVREILGTCVSVGCTVDGKDPKDLQQEIQEGEIEIPEN
Protein: Histone deacetylase (EC 3.5.1.98) (Q8JIY7)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Subcellular location: Nucleus {ECO:0000256|PIRNR:PIRNR037913}.
Interaction partners:
Sequence:
MALSSQGTKKKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNKQQTDIAINWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPIMSKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTIKGHAKCVEYMKSFNLPLLMLGGGGYTIKNVARCWTFETAVALDSTIPNELPYNDYFEYFGPDFKLHISPFNMTNQNTNDYLEKIKQRLFENLRMLPHAPGVQMQAIPEDAVQEDSGDEEDDPDKRISIRAHDKRIACDEEFSDSEDEGQGGRRNAANYKKPKRVKTEEEKDGEEKKDVKEEEKASEEKMDTKGPKEELKTV
Protein: Large ribosomal subunit protein uL16m (60S ribosomal protein L16, mitochondrial) (Q2F985)
Organism: Oryza sativa subsp. indica (Rice)
Subcellular location: Mitochondrion {ECO:0000256|ARBA:ARBA00004173}.
Interaction partners:
Sequence:
MEKHLVMYLTRKSIMLLRKYPLVTEFQVSKCGSHIVKIRRDVLYPKRTKYSKYSKCRCSRGCEPDGTQLGFGRYGTKSCRAGRLSYRAIEAARRATIGQFHRAMSGQFRRNCKIWVRVLADLPITGKPAEVRMGRGKGNPTGWIARVSTGQIPFEMDGVSLSNARQAARLAAHKPCSSTKFVQWS
Protein: RNA 5'-monophosphate methyltransferase (EC 2.1.1.-) (BCDIN3 domain-containing protein) (Q7Z5W3)
Organism: Homo sapiens (Human)
Function: O-methyltransferase that specifically monomethylates 5'-monophosphate of cytoplasmic histidyl tRNA (tRNA(His)), acting as a capping enzyme by protecting tRNA(His) from cleavage by DICER1. Also able, with less efficiently, to methylate the 5' monophosphate of a subset of pre-miRNAs, acting as a negative regulator of miRNA processing. The 5' monophosphate of pre-miRNAs is recognized by DICER1 and is required for pre-miRNAs processing: methylation at this position reduces the processing of pre-miRNAs by DICER1. Was also reported to mediate dimethylation of pre-miR-145; however dimethylation cannot be reproduced by another group which observes a monomethylation of pre-miR-145.
Subcellular location: Cytoplasm {ECO:0000269|PubMed:23063121}.
Interaction partners:
- Protein lifeguard 2
Sequence:
MAVPTELDGGSVKETAAEEESRVLAPGAAPFGNFPHYSRFHPPEQRLRLLPPELLRQLFPESPENGPILGLDVGCNSGDLSVALYKHFLSLPDGETCSDASREFRLLCCDIDPVLVKRAEKECPFPDALTFITLDFMNQRTRKVLLSSFLSQFGRSVFDIGFCMSITMWIHLNHGDHGLWEFLAHLSSLCHYLLVEPQPWKCYRAAARRLRKLGLHDFDHFHSLAIRGDMPNQIVQILTQDHGMELICCFGNTSWDRSLLLFRAKQTIETHPIPESLIEKGKEKNRLSFQKQ
Protein: CRP-like cAMP-activated global transcriptional regulator (cAMP receptor protein) (CRP) (cAMP regulatory protein) (P9WMH3)
Organism: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Function: Global transcriptional regulator that complexes with cAMP and binds to specific DNA promoter sites, causing DNA-bending, to regulate transcription. cAMP improves binding to specific DNA sequences, probably by altering protein conformation. The CRP regulon is predicted to contain about 115 genes. Some genes are activated by CRP (rpfA, whiB1) while others are repressed (fadD10). There are 2 CRP-binding sites in the promoter of whiB1, at low concentrations of CRP with or without cAMP transcription of whiB1 is enhanced via site CRP1, then repressed as site CRP2 is filled.
Interaction partners:
- Transcriptional regulator WhiB1
- Uncharacterized protein Rv1318c
- Uncharacterized protein Rv1319c
- Adenylate cyclase
- Probable cyclase
- Uncharacterized protein Rv2212
- Uncharacterized protein Rv1320c
- Resuscitation-promoting factor RpfA
- Probable conserved transmembrane protein
Sequence:
MDEILARAGIFQGVEPSAIAALTKQLQPVDFPRGHTVFAEGEPGDRLYIIISGKVKIGRRAPDGRENLLTIMGPSDMFGELSIFDPGPRTSSATTITEVRAVSMDRDALRSWIADRPEISEQLLRVLARRLRRTNNNLADLIFTDVPGRVAKQLLQLAQRFGTQEGGALRVTHDLTQEEIAQLVGASRETVNKALADFAHRGWIRLEGKSVLISDSERLARRAR
Protein: Uncharacterized protein C18.17c (O74867)
Organism: Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Subcellular location: Cytoplasm {ECO:0000269|PubMed:16823372}. Nucleus {ECO:0000269|PubMed:16823372}.
Interaction partners:
- Protein dml1
- LON peptidase N-terminal domain and RING finger protein C14F5.10c
- Ankyrin repeat-containing protein C6C3.08
Sequence:
MDSIELIPGLPGPGRRLLQLLKDLPSNPSVIVREIPDAIDAFRESITPATRPSCLGLLDTILSCFELPIPTEPIMKALGKLLEPMSWADLKKFGIESYLVTGLEHPSTDVEIFCLHLIRRANWEKKEIGEPLFEAIMACINSRSIAVSEEATVLLFDMADFPYYFNLIIKRFTFVDYEIMNSTLRVRWLTLFAKLSTKSPEYLEELIKDDKLVINGDNKDILLQINFVDVLGIMLEAPFTYEYISSEKTKYLDTIAQDYKGSADSYTDHIGLKFLPRLCELHPDAINSLDEKHQLFDAVRERMKTNDATSILLYGVFLSNTVVTQALIKKYGIEDEANRYVPRWLTRRFLMDEPGMSSFAHALLQPDHNLWMQLWRILPPNTLSTLVNTASSPIPRSRQLAYQCLLHIAQNSPIQIASEGFAIRHLLEAEGDHETCLLRFQVLKTMMESPHGGPKLPFGRYREDILKRLQQGPIVSGASTLKVAAETA
Protein: Protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic (AtCPP1) (Protein CELL GROWTH DEFECT FACTOR 1) (AtCDF1) (Q9FN50)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Essential protein required during embryogenesis. Exhibits holdase chaperone activity involved in the stabilization of NADPH:protochlorophyllide oxidoreductase (POR) proteins against photooxidative stress during POR proteins import into chloroplasts. Required for chloroplast biogenesis and development. When expressed in yeast, triggers mitochondria-mediated cell death associated with the loss of mitochondrial membrane potential.
Subcellular location: Mitochondrion membrane {ECO:0000269|PubMed:16192270}; Multi-pass membrane protein {ECO:0000255}. Plastid, chloroplast envelope {ECO:0000269|PubMed:24097264, ECO:0000269|PubMed:24151298}. Plastid, chloroplast thylakoid membrane {ECO:0000269|PubMed:24151298}; Multi-pass membrane protein {ECO:0000255}. Note=Targeted to mitochondrion when expressed in yeast. {ECO:0000269|PubMed:16192270}.
Interaction partners:
- 3-oxo-5-alpha-steroid 4-dehydrogenase
- Adagio protein 3
- CRC domain-containing protein TSO1
- Lung seven transmembrane receptor family protein
Sequence:
MSSSLLLSGSTVSSSFIAPSKPSLVRNSSKTSLLPFRNVSRSFKTVKCTVDSSYGGNVPTFPRTRVWDPYKRLGVSPYASEEEIWASRNFLLQQYAGHERSEESIEGAFEKLLMSSFIRRKKTKINLKSKLKKKVEESPPWLKALLDFVEMPPMDTIFRRLFLFAFMGGWSIMNSAEGGPAFQVAVSLAACVYFLNEKTKSLGRACLIGIGALVAGWFCGSLIIPMIPTFLIQPTWTLELLTSLVAYVFLFLSCTFLK
Protein: Zn(2)-C6 fungal-type domain-containing protein (Q2UJH7)
Organism: Aspergillus oryzae (strain ATCC 42149 / RIB 40) (Yellow koji mold)
Interaction partners:
Sequence:
MSHSPTDIPSTSEKEMESTPEKPPKQACDNCRRRKIKCSRELPCDKCQRLLLSCSYSDVLRRKGPKFRTLYPLAPIHPLASRPRPLTKEWLPPNPGACHLASPTSPPSTVADAQYLHPDFSESFTRLPPPDLVSSPDSTNSLFDSSTIGALPAPRRLSTPNLLAHVNVFLKYLFPIMPVVRQDQLQQDCHQPERLSPQRYAFIAALCAATHIQLKLDGAAPGPEAASARASLDGHPMLSGEELLAEAVRARKEYNVVDEINMENLLTSFFLFAAYGNLDRQDQAWFYLCQTTSMVFTLGLQRESTYSKLSVEEAEEKRRVFWLLFVTERGYALQQAKPVMLRNSIHKPQVLCSDDPILAYGFINLINVFEKLSPNLYDWVSAGGSSADGDPPPTSSIQSSLAKQISLEGVSEIQKVDILITQQWLQTMMWKLSMTHVTQPGSRDDAVLPFHLPVLVGKAVMGVIAAASQGAVDAHGIGMEQKLYDLGTSVADVSRSLSTKAAHHLAESTIDPRELLWGILTTLSRIRGSQSYLFPALVEQSRGIISFDCSLSISDFLPSFGGPPAIMWRTGESGFDLLGIADDLQERENEGGEGIVVAGEEISF
Protein: Lysosomal acid lipase/cholesteryl ester hydrolase (Acid cholesteryl ester hydrolase) (LAL) (EC 3.1.1.13) (Cholesteryl esterase) (Diacylglycerol lipase) (Lipase A) (Sterol esterase) (Triacylglycerol ester hydrolase) (Triacylglycerol lipase) (P38571)
Organism: Homo sapiens (Human)
Function: Catalyzes the deacylation of triacylglyceryl and cholesteryl ester core lipids of endocytosed low density lipoproteins to generate free fatty acids and cholesterol.
Subcellular location: Lysosome {ECO:0000250|UniProtKB:Q64194}.
Interaction partners:
- Secretoglobin family 1D member 2
- Bile salt-activated lipase
- 7-dehydrocholesterol reductase
- Delta
- Pancreatic triacylglycerol lipase
- Cholesterol 25-hydroxylase
- Cytochrome P450 7A1
- Apolipoprotein B-100
- Sterol 26-hydroxylase, mitochondrial
- Cholesterol 24-hydroxylase
Sequence:
MKMRFLGLVVCLVLWTLHSEGSGGKLTAVDPETNMNVSEIISYWGFPSEEYLVETEDGYILCLNRIPHGRKNHSDKGPKPVVFLQHGLLADSSNWVTNLANSSLGFILADAGFDVWMGNSRGNTWSRKHKTLSVSQDEFWAFSYDEMAKYDLPASINFILNKTGQEQVYYVGHSQGTTIGFIAFSQIPELAKRIKMFFALGPVASVAFCTSPMAKLGRLPDHLIKDLFGDKEFLPQSAFLKWLGTHVCTHVILKELCGNLCFLLCGFNERNLNMSRVDVYTTHSPAGTSVQNMLHWSQAVKFQKFQAFDWGSSAKNYFHYNQSYPPTYNVKDMLVPTAVWSGGHDWLADVYDVNILLTQITNLVFHESIPEWEHLDFIWGLDAPWRLYNKIINLMRKYQ
Protein: Erythrocyte membrane protein 1, PfEMP1 (Q8I640)
Organism: Plasmodium falciparum (isolate 3D7)
Interaction partners:
Sequence:
MTSCSPENTKMAPKTRASDYKDAQDAKHLLDMIGEVVQKQAYSEALTRGRSALQGRLSDARFLHGTSWEQANQNVCSLKHTHDTNVRWGVIHPCDNRLGNLYSEESASQCSTSRISGNNSDSGSCAPYRKLQLCDYNLEKITDANVTNTHNLLVDVLLAAKHEGDSLSKYMKENPKIIPKSNVCTVLARSFADIGDIIRGKDLYVGNRKEKEKEKLQKNLKNIFAKIHSGLTKKGAEARYKDNDENYYQLREDWWEANRAKVWEAMTCSVEDAYYFRQTCGGEKTASTNKCRCVNTDPPTYFDYVPQYLRWFEEWAEEFCRIKELKLENVKTRCRGEKDGEKYCSRNGYDCTGTIIKRNIFRPDPECTNCLFECNHYQDWIDNKKKEFEKQKKKCEKEIYNTSTTNKRTNNNVNVMYYDDFYKELQGRYRTINELLNSLNEETKCKSTENTDKESKIDFNDSEKTFSASKYCKPCPDCGVVKQDDGNFKVREETDAECQVKNDATPLDGVKPTDIEVLYSGVERKHISEKLSEFCSKPDDQYGIKNEKWECYYKSSVDNKCIMQTNNQKVESHSKIMKFYEFFIFWVTYMLNDCIDWKKKITKCINNGTKWRCKNKCKNNCKCFEKWVKKKQVEWNTMKEQYEKQPDLVNNRHFTTLEWFLEGQFLKTIEKAYGNEDAIEKIQEFLQKKSKQEDDEIKDKRDIIDILLEHELDEAQECKDNNREEKNCSKEPHDDLDDEDDLYEDETHYNPCSAQPGGRYTVRVKDIAKQMHRRAKTQMRNNSVVDDDNKLEGDIFKVTFRNGGKGSELQGENICNINTTHSNDSRGSKGEPCKGKDGSGERMKIGTEWSYIKEKEISYKDFYLPPRRQHMCTSNLENLDVESVTKEDKASHSLLGDVQLAAKYEAENIKKLYVENNDRKDQEAICRAVRYSFADIGDIIRGRDMWEHKDQTTLQNHLKSVFKNIKEKLPGIQGKYADDERNIPAYKLLREDWWEANRRQVWKAMTCENNGIKCDAHNAKHPPPDDYIPQRLRWMTEWSEWYCKMQSQEYEKLKEGCKKCMENKGKNCIKDTPECNDCKQACEEYNKKIKEWEKQWHKIQVQYLMLYYEANTTARYGIHAYAYAVGEKDKPVVAFLQKLQEANKSSASKRSKRSTDGTTTDTLTPTTPYSTAEGYVHQEATMNCDTQTQFCEKKHGGTTPTGTNDTDAPYTFKQPPPEYKDACECDGKSPQAPKKEEEKKDACTIVNSLLQNKKATDPIDGCNQKSDANWDCDPSTFVNDNNNGACMPPRRIKLCIYYLENHTQKGNIKKEFQLREAFIKCAGAEIFLLWQKYKTDNNSDTKLQTQLESGQIPEEFKRQMFYTFGDFRDLCLGNDIGKADNTKDISTTVNRILSVTNGETQTTAENWWEKNAESIWQGMLCGLSHAVSARDKETVQKTLTNNPSYKYDLVKFSGSDNPPTLEKFAQTPQFLRWFIEWSDEFCRERKEKLDKLLKECKEYECNEENMDEKKKKCEDACKVYEEWLQGWKDQYKKQSKKFTTDKEKKEYKDDPDLDGATYAYQYLSKKLKPICQNGTTTDKCDYNCMENASRQPQTSACSQEQQQQGNTSSTQNHFPEAFDCPPKEIGDRCNCPKLPEPKYCVDKTAYDIRKDAEKNIKDIYSSIKGNGEIYKGKCNPTETKIDENGINTCEFKKRYPNANNLLDTSCDNKGNERFKIGQKWNYKYIYKIGKNLYIPPRRQHMCINHLKQIIKYTDTDSTTLLKKVQEVAKKEGDDIIKKLLPKYPCNEDVICKAMKYSFADLGDIIRGRDIYIGNNNQIENKLQQVFKNIYDSNKHKLSNYNDNGDSKYTKLREAWWDANRKDIWKAMTCAAPEEAKIYITKEGGYISPLTSTKNHCGHKDDPPDYDYIPQPLRWISEWGEQFCLYQKHLLESMKICENCKKNSGECKQSVHGACMDCKKKCEEYKKFIEIWKKQFETQNEAYKEIYKKATSNGRYFNGIDENTKKFVKKLKDTCKTGDLASADKYLENGSVCRRFKFVKTDTHIKNYAFHNTPLSYKEHCECAKNFDPLDECPVDKDECKKYGRYSCRKNHYNKNPIEWTNHFVKKSIRNYEAVMVPPRRRQLCLIGNRRFVGRVKDEKMFKEYLLRDASSEAKMLSQYYNFDNEKALQAIKYSFADIGNIIKGDDMLDDGISEKIENIFEHKINKRTHSSSLSSSSSSGPNITPSTWWEKNKEKIWYVMMCYYTGEHKTATSCPSHNDIDNEDQFLRWMTEWAEYFCKEKKKEVEELIEKCKTEITTKTYPTSNQNKQSSCYKVLEKYNHWLYNRKLEWNDISKKYQTYYNENSKSTQLKRSAQEYVDQRCKECTCNFDEIIEKYDKSGNGISIVHSLLKDLNPGRTCGPDTSHKSDTKPPLPPPLPPAVDPPQAEEPFNRDILEKTIPFGVALALGSIAFLFLKKKTQTPVDLFSVINIPKSDYDIPTLKSKNRYIPYKSAQYKGKTYIYMEGDSDEDKYAFMSDTTDVTSSESEYEELDINDIYVPGSPKYKTLIEVVLEPSKRDTQNDIPNDIQNDIQSDGIPSSKITDNEWNTLKDEFISQYLQSEQPNDYKNGNIPLNTQPNTLYFDKPEEKPFITSIHDRNLYSGEEYSYNVNMVNSMDDIPINRDNNVYSGIDLINDALNGDYDIYDELLKRKENELFGKNYKKNTSNNSVAKLTNSDPIMNQLDLLHKWLDRHRDMCEKWKNNHERLAKLKEEWENETHSGNTHPSDSNKTLNTDVSIQIHMDNPKPINQFTNMDTILEDLEKYNEPYYDVQDDIYYDVNDHDASTVDSNNMDVPSKVQIEMDVNTKLVKEKYPIADVWDI
Protein: Exported protein family 1 (O97462)
Organism: Plasmodium falciparum (isolate 3D7)
Interaction partners:
Sequence:
MIIIVPFIFFNLIFTSDMMYEYIENTKVPIFVKLFFGKSIFIEDIFYYVGMIMKEMMEGQNIREEEVAELLKDRLDLYIDNEDEWEKLMENEISMLLKSSFSNFILESIGWTYENVSNIFLEEKANSGINKKDIYLKEANERMIRNSIVLRQCKSRFISIITNYYPFKEQNNPFIKQAQYVSSSNYVLDDIINNIDYSIDNIHRAIDNLYYEHILNLLEEEKNEILEEILRNILKIILCDVETTVRRSAQKVLQNAEGDTNLMLKRAKGLQSLGKMILQKVN
Protein: Myosin binding protein C, slow-type (F7D574)
Organism: Mus musculus (Mouse)
Interaction partners:
Sequence:
XEDWIVANTDLIDKTKFTINGLPTDAKIFVRVKAINAAGASEPKYYSQPILVKEIIEPPKIRIPRHLKQTYIRRVGEAVNLVIPFQGKPRPELTWKKDGEEIDKNQINIRNSETDTIIFIRKAERSHSGKYDLQVKVDKYVENASIDIQIVDRPGPPQTVTIEDVWGENVALTWTPPKDDGNAAITGYTIQKADKKSMEWFTVIEHYHRTNATITELVIGNEYYFRVFAENMCGLSEDATMTKESAVIAKDGKIYKNPVYEDFNFTEAPMFTQPLVNTYAIAGYNATLNCSVRGNPKPKITWMKNKVAIVDDPRYRMFSNQGVCTLEIRKPSPYDGGTYCCKAVNDLGTVEIECKLEVKASD
Protein: Beta-arabinofuranosyltransferase RAY1 (EC 2.4.2.-) (Protein REDUCED ARABINOSE YARIV 1) (F4I6V0)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Beta-arabinofuranosyltransferase that transfers specifically an arabinosyl residue from UDP-arabinofuranose to the monosaccharide galactose or beta-methyl-galactoside in vitro. Catalyzes the addition of a beta-arabinofuranose residue onto a beta-galactosyl residue of an Yariv-precipitable wall polymer in vivo.
Interaction partners:
- Beta-1,6-galactosyltransferase GALT29A
- Beta-1,6-galactosyltransferase GALT31A
- Beta-glucuronosyltransferase GlcAT14A
- Fucosyltransferase 6
- Beta-glucuronosyltransferase GlcAT14C
- Beta-glucuronosyltransferase GlcAT14B
- Probable fucosyltransferase 4
- Hydroxyproline O-galactosyltransferase GALT2
- Probable xyloglucan galactosyltransferase GT14
- Beta-1,3-galactosyltransferase 7
Sequence:
MMSRIEAYQSDIAVLMDPETVLLPDFISALSYAHELGRDWLLVSSSVEIPRFPFHWDETRHFWRQDNGKRVRFRELQKMISLRSLQSNSSASKMIMAWNNIDMPLHCGVLPPFLYQRGTHNQWIINEAMSCKRRFVFDATSTISSFFLGNAENIYNRSDNVSEPKTRNWEYVGNSHLGQLYGSLYSRSYTLPKLLKCNRRYIFVSASERSTDLSIPKGKSLGFRTREKISACITRTKSRSLKLDFVQKDETVPPLKFPFDLESLLPLVADKNRTVVLSVAGYSYKDMLMSWVCRLRRLKVPNFLVCALDDETYQFSILQGLPVFFDPYAPKNISFNDCHFGSKCFQRVTKVKSRTVLKILKLGYNVLLSDVDVYWFRNPLPLLQSFGPSVLAAQSDEYNTTAPINRPRRLNSGFYFARSDSPTIAAMEKVVKHAATSGLSEQPSFYDTLCGEGGAYRLGDDRCVEPETNLTVQFLDRELFPNGAYGDLWLKEDVRAECEKKHCFVLHNNWISGRLKKLERQMMKGLWEYDASMRMCV
Protein: Kinesin-like protein (Q582I0)
Organism: Trypanosoma brucei brucei (strain 927/4 GUTat10.1)
Subcellular location: Cytoplasm {ECO:0000256|ARBA:ARBA00004496}.
Interaction partners:
- Kinesin-like protein, putative
- Kinesin-like protein
- Kinesin-like protein
- Kinesin-like protein
- Kinesin, putative
- Kinesin-like protein
- Kinesin, putative
- Kinesin, putative
- Kinesin-like protein
- Kinesin, putative
Sequence:
MAEKVQVVSRLRPPLRPNSPLSVVPVDEQRLCVANRRVYDVDRVYGTNDSTEYIFYDRVAALVDRFLTGYNATVLAYGQTGSGKTFTMSGLMPLILRYTVERMGGHTKNLSFQCVEVYGEVLRDLLTSDPAGSAKHLHIHEVDSSANNRNGTANNLNANNCGASVVVVGAARVKARNFEEIQEIIDYSSKMRATGATQMNEHSSRSHSIFTIFNHEQQSKLNLVDLAGSERNKKTHNVGQRFRESCAINGGLLALGNVIRALSRNSFSHPEAPQHVPYRSSKLTRLLQDSLGGNSTTLLIACVSADADNTGETVRTMQYSALAARILNEPFLRFEGPAAASLVEVEDDEKRQDEHECQRNDNSAAAGGSTEVIRLRKRVAGLEEHLQRCREELKNDEVAFAQQIKYTKMLLQENEQLKQRISSLEGFVPSPSMTPPATAAAAAAAREMEINSARLRERTALWQQLHKHRRGSPEAVQQKLSGQEPLASHRLRSPLMDACGFAPINEYSGQEYSWEGEKTVISTQSQQQQHLFGTNPALHSTAWNEPAKVVELPENISNINHINDSGSLYYESEKHVTGREEQLNLLAKEALYYQNSNSELRRRLRAVMALYEAQQQEAAMLRHEVEQIRELIDGRCQV
Protein: Zinc finger MYND domain-containing protein 11 (A0A0A0MRY2)
Organism: Homo sapiens (Human)
Subcellular location: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
Interaction partners:
Sequence:
MSRVHGMHPKETTRQLSLAVKDGLIVETLTVGCKGSKAGIEQEGYWLPGDEISIKKKNTNKQEMGTYLRFIVSRMKERAIDLNKKGKDNKHPMYRRLVHSAVDVPTIQEKVNEGKYRSYEEFKADAQLLLHNTVIFYGADSEQADIARMLYKDTCHEIPNHELVWAKMKGFGFWPAKVMQKEDNQVDVRFFGHHHQRAWIPSENIQDITVNIHRLHVKRSMGWKKACDELELHQRFLREGRFWKSKNEDRGEEEAESSISSTSNEQLKVTQEPRAKKGRRNQSVEPKKEEPEPETEAVSSSQEIPTMPQPIEKVSVSTQTKKLSASSPRMLHRSTQTTNDGVCQSMCHDKYTKIFNDFKDRMKSDHKRETERVVREALEKLRSEMEEEKRQAVNKAVANMQGEMDRKCKQVKEKCKEEFVEEIKKLATQHKQLISQTKKKQWCYNCEEEAMYHCCWNTSYCSIKCQQEHWHAEHKRTCRRKR
Protein: Elongin-A (EloA) (Elongin 110 kDa subunit) (RNA polymerase II transcription factor SIII subunit A1) (SIII p110) (Transcription elongation factor B polypeptide 3) (Q63187)
Organism: Rattus norvegicus (Rat)
Function: SIII, also known as elongin, is a general transcription elongation factor that increases the RNA polymerase II transcription elongation past template-encoded arresting sites. Subunit A is transcriptionally active and its transcription activity is strongly enhanced by binding to the dimeric complex of the SIII regulatory subunits B and C (elongin BC complex).
Subcellular location: Nucleus {ECO:0000250|UniProtKB:Q14241}. Note=Localizes to sites of DNA damage. {ECO:0000250|UniProtKB:Q14241}.
Interaction partners:
- Elongin-C
- Elongin-B
- RNA polymerase-associated protein LEO1
- Superkiller complex protein 8
- RNA polymerase-associated protein CTR9 homolog
- Cullin-5
- Elongin-B
- Parafibromin
- Elongin-C
- Elongin-C
Sequence:
MAAESALQVVEKLQARLAANPDPKKLLKYLKKLSVLPITVDILVETGVGKTVNSFRKHEQVGNFARDLVAQWKKLVPVERNNEAEDQDFEKSNSRKRPRDVPQQEEEAEGNYQESWQASGSQPYSPEHRQKKHRKLPELERPHKVAHGHERRDERKRCHKVSPPYSSDPESSDYGHVQSPPPSSPHQMYTDLSRSPEMDQEPIVSHPKPGKVHSNTFQDRLGVSHLGEHQGKGAVSQNKPHKSSHKEKRPVDARGDEKSSVMGREKSHKASSKEESRRLLSEDSAKEKLPSSVVKKEKDREGNSLKKKLSPALDVASDNHFKKPKHKDSEKIKSDKNKQSVDSVDSGRGTGDPLPRAKDKVPNNLKAQEGKVRTNSDRKSPGSLPKVEEMDMDDEFEQPTMSFESYLSYDQPRKKKKKVVKTSGTALGEKGLKKKDSKSTSKNLNSAQKLPKANENKSDKLQPAGAEPTRPRKVPTDVLPALPDIPLPAIQTNYRPLPSLELISSFQPKRKAFSSPQEEEEAGFTGRRMNSKMQVYSGSKCAYLPKMMTLHQQCIRVLKNNIDSIFEVGGVPYSVLEPVLERCTPDQLYRIEECNHVLIEETDQLWKVHCHRDFKEERPEEYESWREMYLRLQDAREQRLRLLTNNIRSAHANKPKGRQAKMAFVNSVAKPPRDVRRRQEKFGTGGAAVPEKVRIKPAPYTTGSSHVPASNSSSSFHSSPEELAYEGPSTSSAHLAPVASSSVSYDPRKPAVKKIAPMMAKTIKAFKNRFSRR
Protein: Aly/REF export factor (E9PB61)
Organism: Homo sapiens (Human)
Interaction partners:
Sequence:
MPDSAPAMADKMDMSLDDIIKLNRSQRGGRGGGRGRGRAGSQGGRGGGAQAAARVNRGGGPIRNRPAIARGAAGGGGRNRPAPYSRPKQLPDKWQHDLFDSGFGGGAGVETGGKLLVSNLDFGVSDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQLVTSQIDAQRRPAQSVNRGGMTRNRGAGGFGGGGGTRRGTRGGARGRGRGAGRNSKQQLSAEELDAQLDAYNARMDTS
Protein: Kinesin-like protein (A0A8I6AL48)
Organism: Rattus norvegicus (Rat)
Subcellular location: Cytoplasm, cytoskeleton {ECO:0000256|ARBA:ARBA00004245}.
Interaction partners:
Sequence:
MPINKSEKPESCDNVKVVVRCRPLNEREKSMCYRQAVSVDEMRGTITVHKTDSSNEPPKTFTFDTVFGPESKQLDVYNLTARPIIDSVLEGYNGTIFAYGQTGTGKTFTMEGVRAVPGLRGVIPNSFAHIFGHIAKAEGDTRFLVRVSYLEIYNEEVRDLLGKDQTQRLEVKERPDVGVYIKDLSAYVVNNADDMDRIMTLGHKNRSVGATNMNEHSSRSHAIFTITIECSEKGVDGNMHVRMGKLHLVDLAGSERQAKTGATGQRLKEATKINLSLSTLGNVISALVDGKSTHVPYRNSKLTRLLQDSLGGNSKTMMCANIGPADYNYDETISTLRYANRAKNIKNKARINEDPKDALLRQFQKEIEELKKKLEEGEEVSGSDISGSEEDDNEEGELGEDGEKRKKRRGKKKVSPDKMMEMQAKIDEERKALETKLDMEEEERNKARAELERREKDLLKAQQEHQSLLEKLSALEKKVIVGGVDLLAKAEEQEKLLEESNMELEERRKRAEQLRKELEEKEQERLDIEEKYTSLQEEAQGKTKKLKKVWTMLMAAKSEMADLQQEHQREIEGLLENIRQLSRELRLQMLIIDNFIPQDYQEMIENYVHWNEDIGEWQLKCVAYTGNNMRKQTPVPDKKERDPFEVDLSHVYLAYTEESLRQSLMKLERPRTSKGKARPKTGRR
Protein: Pinin (O35691)
Organism: Mus musculus (Mouse)
Function: Transcriptional activator binding to the E-box 1 core sequence of the E-cadherin promoter gene; the core-binding sequence is 5'CAGGTG-3'. Capable of reversing CTBP1-mediated transcription repression. Auxiliary component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junction on mRNAs. The EJC is a dynamic structure consisting of core proteins and several peripheral nuclear and cytoplasmic associated factors that join the complex only transiently either during EJC assembly or during subsequent mRNA metabolism. Participates in the regulation of alternative pre-mRNA splicing. Associates to spliced mRNA within 60 nt upstream of the 5'-splice sites. Component of the PSAP complex which binds RNA in a sequence-independent manner and is proposed to be recruited to the EJC prior to or during the splicing process and to regulate specific excision of introns in specific transcription subsets. Involved in the establishment and maintenance of epithelia cell-cell adhesion (By similarity).
Subcellular location: Nucleus speckle {ECO:0000250}. Cell junction, desmosome {ECO:0000250}. Note=Cell-cell contact area, predominantly desmosome of intercellular adherens junction. Not a nucleocytoplasmic shuttling protein (By similarity). {ECO:0000250}.
Interaction partners:
- RNA-binding protein with serine-rich domain 1
- Histone deacetylase complex subunit SAP18
- Apoptotic chromatin condensation inducer in the nucleus
- Protein mago nashi homolog 2
- Protein mago nashi homolog
- Eukaryotic initiation factor 4A-III
- Serine/arginine repetitive matrix protein 1
- Serine/threonine-protein kinase PRP4 homolog
- RNA-binding protein 8A
- Protein CASC3
Sequence:
MAVAVRALQEQLEKAKESLKNVDENIRKLTGRDPNDVRPIQARLLALSGPGGGRGRGSLLLRRGFSDSGGGPPAKQRDLEGAVSRLGGERRTRRESRQESDPEDDDVKKPALQSSVVATSKERTRDLIQDQNMDEKGKQRNRRIFGLLMGTLQKFKQESTVATERQKRRQEIEQKLEVQAEEERKQVENERRELFEERRAKQTELRLLEQKVELAQLQEEWNEHNAKIIKYIRTKTKPHLFYIPGRMCPATQKLIEESQRKMNALFEGRRIEFAEQINKMEARPRRQSMKEKEHQVVRNEEQKAEQEEGKVAQREEELEETGNQHNDVEVEEAGEEEEKEAGIVHSDAEKEQEEEEQKQEMEVKTEEEAEVREGEKQQDSQPEEVMDVLEMVESVKHVIAEQEVMETNQVESIEPSENETSKELEPEMEFDVEPDKECKSLSPGKENINSQEVEKESEEKEEKEEKEPEPQPEPVAQPQPPPQPLPQSQPHSQPHSQPQPVLQSQPLCQPETLPLAVLQPPPQVIQEQGNLLPERKDFPLESIKLPEVSVEPVLTVHSENKSKNKTRSRSRGRARNKTSKSRSRSSSSSSSSSSSTSSSSGSSSSSGSSSSRSSSSSSSSTSGSSSRDSSSSTSSSSESRSRSRGRGHNRDRKHRRSMDRKRRDTSGLERSHKSSKGGSSRDRKGSKDKSSRPDRKRSISESSRSGKRSSRSERDRKSDRKDKRR
Protein: Zinc finger protein 703 (Zinc finger elbow-related proline domain protein 1) (P0CL69)
Organism: Mus musculus (Mouse)
Function: Transcriptional corepressor which does not bind directly to DNA and may regulate transcription through recruitment of histone deacetylases to gene promoters. Regulates cell adhesion, migration and proliferation. May be required for segmental gene expression during hindbrain development.
Subcellular location: Nucleus {ECO:0000269|PubMed:21317240}. Cytoplasm {ECO:0000269|PubMed:21317240}.
Interaction partners:
Sequence:
MSDSPAGSNPRTPESSGSGGGSSSGGGGGKRPAVPAVVSLLPPADPLRQANRLPIRVLKMLSAHTGHLLHPEYLQPLSSTPVSPIELDAKKSPLALLAQTCSQIGKPDPPPSSKLNSVAAAAANGLGSEKDPSRSAPGAASAAAALKQLGDSPAEDKSSFKPYSKGSGGGDSRKDSGSSSVSSTTSSSSSSPGDKAGFRVPSAACPPFPPHGASVSTSSNSSSPGGSRGGSPHHSDCKNGGGGAGELDKKEQEAKPSPEPAAGSRGSGGDSAHGGPEATASGRKSEPPSALVGAGHVAPVSPYKPGHSVFPLPPSSIGYHGSIVGAYAGYPSQFVPGLDPSKSGLVGGQLSGGLGLPPGKPPSSSPLTGASPPSFLQGLCRDPYCLGGYHSASHLGGSSCSTCSAHDPTGPSLKASGYPLVYPGHPLQPAALSSSAAQAALPGHPLYTYGFMLQNEPLPHSCNWVAASGPCDKRFATSEELLSHLRTHTALPGAEKLLAAYPGASSLGSAAAAAAAAASCHLHLPPPAAPGSPGSLSLRSPHTLGLSRYHPYGKSHLSTAGGLAVPSLPTAGPYYSPYALYGQRLASASALGYQ
Protein: Leucine-rich repeat protein (LRRP), putative (Q9N937)
Organism: Trypanosoma brucei brucei (strain 927/4 GUTat10.1)
Interaction partners:
Sequence:
MKVRITDHNTFWHAPQLLPYNTSPPRLIHRLALLLKKKKHFLNTQHLKESETGTTMSGNQGRKRQRSSSPEQSEALKEPSTTEQNKLTTITITEETRDASNDETVVSLLNEHEKLIKQTTRLESSVKALRCFMSNLTAMSGERQGGVCDDTECIHRVTLYNAADNAFSDEGLYEGALSSLCGRIQAKKLTITLSKGWKFNLEGVSKLKQLEELRIEYPRGKLVNMISLNNLDMLKRLCLRSNNIDNNDIHCIFSVGTLEELAITDTMQLTNIRGISRLTNLKCLELNSTDIDDSCIGEISACVKLSKLSVSECNNITDATPISQLAALEELNVNSCYHITKGIGTLGMLLRLRMLDLSGVPVEDNCLKDLCDCGSLERLNLSYCIQLTDINPLSSATAIEELNLNGCRRITRGIGVVWALPKLRVLHMKDVQLEDSVIGSLGNGNSFVRLSLENCAGFGDMTLLSSIVTLEELNIQKCADIISGVGCLGTLPYLRVLNVKEVHISSLDFTGIGASKSLLQLTLESITGLIDVEALANILTLEKLSLHGCTGIDAGIGCLGNLPQLKMLDLSGTNTDNESLRSLCLSQTMVSLNLSHCWKMTNVSHISSLEALNELNLNNCFGINAGWEAIEKLQQLHVAILSNTHITDRDISHFSKCKNLVTLDLSFCNKLLDVTTLSNITTLEELNLDSCSNIRKGLSVLGELPRLCVLNIKGVELEDSVIGSLGNGNSFVRLSLEHCKGFGDVTPLSNLVTLEELNLHYCDKVTSGMGTLGRLLQLRVLDLGRTQVDNNSLENICTSSIPLVLLNLSHCKKITSISAIASLTALEELNIDNCCNVTSGWNVFGTLHQLRVATLSNTRINDENVRYVSECKSLNTLNLAFCKDITDVTALSKITMLEELNLDCCHNIRKGIETLGKLPKARILSMKECYMGDSDAQQCSILGNSKSLVKLNLERSMGFISVKALSNIATLEELVLDHAREVCCIPSFSCLPRLRVLNLKYTDINGDVTKNISESKSLRLLNLSHCKWVTDISVLSSLSTLEELNVSSCYGIKKGWESLGKLPLLRVAILSDTNITAKDIACLSSCKTLVKLQFSWCEELSDVTVVYEIQSLEELIVKKYSDGLKGLNALGTLPRLRFLHLRNVRGSDISVESIGTSKSLVRLNIEMRGELTDITPLSNITSLEELSLWECRDTLEGAWTLERLPRLRSLDLGLSDISDSTLYYICLSRFITSLNLTSSWKLTDISGISKLTALEELNLRGCHRITSGWEALSELPRLRVLNLESTSVTTRDGGYYISRCKSLVTLNIQLSDMTDASCLANIKTLEELHIGECDELTQGFSALFTLPRLRILNLMGSLITDEDLREIQPPHTIEELNLSYCKNLNDITPLGRIKSIKKLHLSQSHDVRRLREGFRSLLELPCLSWVDLRNVYGWFDVYVELRKRRVHIR