wanglab/gogpt-training-data huggingface dataset:
Protein: Dynein light chain 2, cytoplasmic (8 kDa dynein light chain b) (DLC8b) (Dynein light chain LC8-type 2) (Q96FJ2)
Organism: Homo sapiens (Human)
Function: Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in changing or maintaining the spatial distribution of cytoskeletal structures (By similarity).
Subcellular location: Cytoplasm, cytoskeleton {ECO:0000269|PubMed:20921139}.
Interaction partners:
- Cytoplasmic dynein 1 intermediate chain 2
- Striatin-4
- Dynein light chain 1, cytoplasmic
- Cytoplasmic dynein 1 intermediate chain 1
- Cytoplasmic dynein 1 heavy chain 1
- Cytoplasmic dynein 2 light intermediate chain 1
- Cytoplasmic dynein 1 light intermediate chain 2
- Bcl-2-modifying factor
- Cytoplasmic dynein 2 heavy chain 1
- Cytoplasmic dynein 1 light intermediate chain 1
Sequence:
MSDRKAVIKNADMSEDMQQDAVDCATQAMEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG
Protein: UDP-glycosyltransferase 71B7 (EC 2.4.1.-) (Q9LSY5)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Interaction partners:
- Mucin-like protein
- Hydroxyproline-rich glycoprotein family protein
- F-box/kelch-repeat protein At1g55270
Sequence:
MKFELVFIPYPGIGHLRSTVEMAKLLVDRETRLSISVIILPFISEGEVGASDYIAALSASSNNRLRYEVISAVDQPTIEMTTIEIHMKNQEPKVRSTVAKLLEDYSSKPDSPKIAGFVLDMFCTSMVDVANEFGFPSYMFYTSSAGILSVTYHVQMLCDENKYDVSENDYADSEAVLNFPSLSRPYPVKCLPHALAANMWLPVFVNQARKFREMKGILVNTVAELEPYVLKFLSSSDTPPVYPVGPLLHLENQRDDSKDEKRLEIIRWLDQQPPSSVVFLCFGSMGGFGEEQVREIAIALERSGHRFLWSLRRASPNIFKELPGEFTNLEEVLPEGFFDRTKDIGKVIGWAPQVAVLANPAIGGFVTHCGWNSTLESLWFGVPTAAWPLYAEQKFNAFLMVEELGLAVEIRKYWRGEHLAGLPTATVTAEEIEKAIMCLMEQDSDVRKRVKDMSEKCHVALMDGGSSRTALQKFIEEVAKNIVSLDKEFEHVALK
Protein: Light-dependent chlorophyll f synthase (Chl f synthase) (Super-rogue D1) (Super-rogue PsbA4) (Sr-PsbA4) (B4WP19)
Organism: Synechococcus sp. (strain ATCC 29403 / PCC 7335)
Function: Synthesizes chlorophyll f or chlorophyllide f (Chl f, 2-formyl chlorophyll a), probably by oxidation of chlorophyll a or chlorophyllide a and reduction of plastoquinone. The reaction is probably light-dependent. Chl f absorbs far red light (FRL, 707 nm in 100% methanol), and is synthesized when cells are grown in FRL, where it provides the advantage of extending the spectral range of harvested light in terrestrial cyanobacteria. Chl f synthesis is probably light-dependent.
Subcellular location: Cellular thylakoid membrane {ECO:0000305}; Multi-pass membrane protein {ECO:0000250|UniProtKB:P51765}.
Interaction partners:
- Photosystem II CP47 reaction center protein
- Cytochrome b559 subunit alpha
- Cytochrome b559 subunit beta
- Photosystem II CP43 reaction center protein
- Photosystem II CP43 reaction center protein
- Cytochrome b559 subunit beta
- Photosystem II 10 kDa phosphoprotein
- Photosystem II reaction center protein K
- Photosynthetic reaction center protein
- Photosystem II D2 protein
Sequence:
MIQTGFGRTSALEGFEQPFDPAQAIDLESPLTSTDTSVENTTRNAGALWPSSQPLSPWERFCRWVTSTENRIYIGWFGMLAIPTLATAAIVFVLAIIAAPAVDMDGTGRMVSGSLLDGNNLITAAVVPTSAAIGLHFYPIWEAASLDEWLINGGPYQLIVLHFIIGIISYQDREWELSYRLKMRPWISLAFTAPVAASVSVLLVYPVGQGGFASGMPLGISGTFTFMMQFQADHNILASPLHQMGVIGVLGGALLCAVHGSLVTSTVCRAPAQTMALTTTKTGTDRQKPKKAKTYSFEHAQAYQQTLLWRGAKFNSSRAVHFCLAALPVAGIWSAAIGVDLAAFDFDRLSFELPSHISVRKTVVPTWSDVVNQANLGIHTVGEKTPPKFSESGFPEFKLSEFVEPIAEDSASTLLSPHS
Protein: Uncharacterized protein (Q38AM5)
Organism: Trypanosoma brucei brucei (strain 927/4 GUTat10.1)
Interaction partners:
- Uncharacterized protein
- Uncharacterized protein
- Uncharacterized protein
- Large ribosomal subunit protein mL46
- Uncharacterized protein
- Ribosomal protein L30 ferredoxin-like fold domain-containing protein
- Large ribosomal subunit protein uL29m
- NADH dehydrogenase 1 beta subcomplex subunit 9
- KOW domain-containing protein
- 39S ribosomal protein L28
Sequence:
MLVPGLSLTRRAVTSSCCRPLHVVRGFSTTCTLFGLEQLQDVPTSTSRRPTGLHRGPGKRQTSEREAAQYKFIRRWELQMRDEWDQLEPFKGLPKPKRQFGNEAAEVIWPYALLLERVVKVHPFTKSIYVYYAQRQSTARGKLAAEIARSFAREFLIPITFHNSQVYTEAEMLLEYSETPWVVLHSLDNGQKPRILPVAPVEGTPAHTAVEQLLAEVVQGCEALGASVADPVTATRVLNERPLQNQYVRVDYQWFGDTPDERASHLVRWEFEPEQIEPKIRHRTRHVLDWLNYDGNLPTHRAVHVNAMREKARQKAPRTVAGPRTFYNSAGSRANARSSRFGGQAAVGK
Protein: RRM9 (Q26293)
Organism: Drosophila melanogaster (Fruit fly)
Interaction partners:
Sequence:
MVEGQTAVQQQQQQPSGAGGASGVGSTTGSAGGPATANNVTNSQAQTNGGTTATTTAAAGAGSTTNAAVGQATANNAASNNNNNNNNTNNNNNNNATANNNNNNEPDPKTNLIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQSLGYGFVNYVKQEDAEKAINALNGLRLQNKTIKVSIARPSSESIKGANLYVSGLPKNMTQSDLESLFSPYGKIITSRILCDNITGEHAAGLSKGVGFIRFDQRFEADRAIKELNGTTPKNSTEPITVKFANNPSSNKNSMQPLAAYIAPQNTRGGRAFPANAAAGAAAAAAAAAIHPNAGRYSSVISRYSPLTSDLITNGMIQGNTIASSGWCIFVYNLAPDTEENVLWQLFGPFGAVQSVKVIRDLQSNKCKGFGFVTMTNYEEAVLAIQSLNGYTLGNRVLQVSFKTNKNKQT
Protein: Glutathione S-transferase (EC 2.5.1.18) (E9PHN6)
Organism: Homo sapiens (Human)
Interaction partners:
Sequence:
MPMTLGYWNIRGLAHSIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLNEKFKLGLDFPNLPYLIDGTHKITQSNAILRYIARKHNLCGESEKEQIREDILENQFMDSRMQLAKLCYDPDFEKLKPEYLQALPEMLKLYSQFLGKQPWFLGDKITFVDFIAYDVLERNQVFEPSCLDAFPNLKDFISRFEVFPL
Protein: LINE-1 retrotransposable element ORF1 protein (L1-ORF1p) (LINE retrotransposable element 1) (LINE1 retrotransposable element 1) (Transposase element L1Md-A101/L1Md-A102/L1Md-A2) (P11260)
Organism: Mus musculus (Mouse)
Function: Nucleic acid-binding protein which is essential for retrotransposition of LINE-1 elements in the genome. Functions as a nucleic acid chaperone binding its own transcript and therefore preferentially mobilizing the transcript from which they are encoded.
Subcellular location: Nucleus, nucleolus {ECO:0000250|UniProtKB:Q9UN81}. Cytoplasm {ECO:0000269|PubMed:28806172}. Cytoplasm, Cytoplasmic ribonucleoprotein granule {ECO:0000250|UniProtKB:Q9UN81}. Cytoplasm, Stress granule {ECO:0000250|UniProtKB:Q9UN81}. Note=Colocalizes with its encoding RNA in cytoplasmic ribonucleoprotein particle. Mainly cytoplasmic, rarely detected in the nucleus, possibly within the nucleolus. {ECO:0000250|UniProtKB:Q9UN81}.
Interaction partners:
Sequence:
MAKGKRKNPTNRNQDHSPSSERSTPTPPSPGHPNTTENLDPDLKTFLMMMIEDIKKDFHKSLKDLQESTAKELQALKEKQENTAKQVMEMNKTILELKGEVDTIKKTQSEATLEIETLGKRSGTIDASISNRIQEMEERISGAEDSIENIDTTVKENTKCKRILTQNIQVIQDTMRRPNLRIIGIDENEDFQLKGPANIFNKIIEENFPNIKKEMPMIIQEAYRTPNRLDQKRNSSRHIIIRTTNALNKDRILKAVREKGQVTYKGRPIRITPDFSPETMKARRAWTDVIQTLREHKCQPRLLYPAKLSITIDGETKVFHDKTKFTQYLSTNPALQRIITEKKQYKDGNHALEQPRK
Protein: Negative regulator of RAS-cAMP pathway (P34072)
Organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Function: Negative regulator of Ras-cAMP pathway. Involved in transcriptional regulation of galactose-inducible genes.
Subcellular location: Nucleus.
Interaction partners:
- Retrograde regulation protein 2
- Protein BMH1
- Retrograde regulation protein 3
- Retrograde regulation protein 1
- Eukaryotic translation initiation factor 2A
- Protein BMH2
- Target of rapamycin complex subunit LST8
- SCF E3 ubiquitin ligase complex F-box protein GRR1
- Target of rapamycin complex 1 subunit KOG1
Sequence:
MSREAFDVPNIGTNKFLKVTPNLFTPERLNLFDDVELYLTLIKASKCVEQGERLHNISWRILNKAVLKEHNINRSKKRDGVKNIYYVLNPNNKQPIKPKQAAVKQPPLQKANLPPTTAKQNVLTRPMTSPAIAQGAHDRSLDNPNSTNNDVKNDVAPNRQFSKSTTSGLFSNFADKYQKMKNVNHVANKEEPQTIITGFDTSTVITKKPLQSRRSRSPFQHIGDMNMNCIDNETSKSTSPTLENMGSRKSSFPQKESLFGRPRSYKNDQNGQLSLSKTSSRKGKNKIFFSSEDEDSDWDSVSNDSEFYADEDDEEYDDYNEEEADQYYRRQWDKLLFAKNQQNLDSTKSSVSSANTINSNTSHDPVRKSLLSGLFLSEANSNSNNHNTAHSEYASKHVSPTPQSSHSNIGPQPQQNPPSANGIKQQKPSLKTSNVTALASLSPPQPSNNERLSMDIQKDFKTDNESNHLYESNAPLTAQTILPTALSTHMFLPNNIHQQRMAIATGSNTRHRFSRRQSMDIPSKNRNTGFLKTRMEISEEEKMVRTISRLDNTSIANSNGNGNDDTSNQRTEALGRKTSNGGRI
Protein: Vomeronasal type-1 receptor (H3BLP0)
Organism: Mus musculus (Mouse)
Subcellular location: Cell membrane {ECO:0000256|ARBA:ARBA00004651, ECO:0000256|RuleBase:RU364061}; Multi-pass membrane protein {ECO:0000256|ARBA:ARBA00004651, ECO:0000256|RuleBase:RU364061}.
Interaction partners:
Sequence:
MSSLTNILYFQAGLGILANTFLLCFYTFTILCHRSKPMDLTSCQLTLAHILFLLAGGDNWLAVILESLNIENDFKCKAIFYTNRVMRGFSICITCLLSVFQAVTISPHTSLLAKFKHKLKTYIIYAVFYIWFYNFLVCSHLLVYVGGFNNVSETNQMRVTESCSLFLMNYIISGLIFTVTTFRDVFLVGVMLITNAYIVIILFRHQRHCKHLHSIRHLRVSPEKRATQTILLLMVFFVVMYWVEIIISSTSLLLWMYDPGFLTVQKLIVTVYPTITPLVQISSDKRVINVLKNLQSKCQQIF
Protein: Kinesin, putative (Q57VI2)
Organism: Trypanosoma brucei brucei (strain 927/4 GUTat10.1)
Subcellular location: Cytoplasm {ECO:0000256|ARBA:ARBA00004496}.
Interaction partners:
Sequence:
MRSQVRVIIRTKPTDTVASAFRILPNNVVSVSRPMGVGARGPTATKAGINRAETAVKEETLTFSAAAVLHNASQESVYNTAVSDLIDSVLQGYSCTLLCYGQCGAGKTYTMFGTDTFSTRGCVQRAIEVLFEAIRTSTDRRYTVKVTFVEVYNEQVFDLLGKGPSASETAVATKRPGRDKNVDGGFNRQRTGSPNYDVANVPSNSKGDGKATVTISGEGTVVLRGVDERQCPTEADAVAAVSEGVGRRLTGANALNRESSRSHAVLTVYVTSTSLLDSDAVTLVSRMSFVDFAGSERTHATSTEAEKQEAHMINRSLIMLEQVILAVSSARSRHVPFRQSKLTMLLKDSLGGGTMTTIIANVWPQPEHMEATLATLNFAKRLMRVESNPTPNVALDPEAQIRVLQKQVNSLKSELRMQDQFAGRVAIPTAPLESDEINGARDIVMAYVEGSIPQIRVSCVREMYACFSVFKTLLLDMESQLRTAERSASPPPTSSQRAQQRTKNVARPTGSQEPKETPRHVNSTMDANVGVSVGTAERASTALGDMFQQQQLLQQQQQLPQPLQLPYQQQQHHQSITSPRDTFMPSTMRPGDRRISGAAAAAGRTLTPVTSASAAASDFPGGSNTTHRFKLNASSESASMLERDLGKDRSRPHGGRGSAIETRLEPGVAPTAGFVGPSSPAPGGKSLVRLESITRDKRAAFEIYKQTPSGICHVQAINSAQEKLARKNDEMHRLRQKVKDVQGVMERYGNFDPKRENAEPGGGHLPFIVPNGSPTQHVFNETTAGETGAEAMASATDSPGRPTDALDTSELEQLINMKPEERKLHLRHVTTALTRAKTEQSLLTSQLDRLREEFMNNFNYWHQMSLQSLVAQQVDKATIPMLKVDTIPSTR
Protein: Gamma-soluble NSF attachment protein (SNAP-gamma) (N-ethylmaleimide-sensitive factor attachment protein gamma) (Q99747)
Organism: Homo sapiens (Human)
Function: Required for vesicular transport between the endoplasmic reticulum and the Golgi apparatus.
Subcellular location: Membrane {ECO:0000250|UniProtKB:P81127}; Peripheral membrane protein {ECO:0000250|UniProtKB:P81127}. Golgi apparatus {ECO:0000250|UniProtKB:Q9CWZ7}.
Interaction partners:
- Alpha-soluble NSF attachment protein
- Vesicle-fusing ATPase
- Syntaxin-12
- Syntaxin-7
- Vesicle-associated membrane protein 4
- Syntaxin-6
- Syntaxin-8
- NBAS subunit of NRZ tethering complex
- Beta-soluble NSF attachment protein
- Vesicle transport through interaction with t-SNAREs homolog 1B
Sequence:
MAAQKINEGLEHLAKAEKYLKTGFLKWKPDYDSAASEYGKAAVAFKNAKQFEQAKDACLREAVAHENNRALFHAAKAYEQAGMMLKEMQKLPEAVQLIEKASMMYLENGTPDTAAMALERAGKLIENVDPEKAVQLYQQTANVFENEERLRQAVELLGKASRLLVRGRRFDEAALSIQKEKNIYKEIENYPTCYKKTIAQVLVHLHRNDYVAAERCVRESYSIPGFNGSEDCAALEQLLEGYDQQDQDQVSDVCNSPLFKYMDNDYAKLGLSLVVPGGGIKKKSPATPQAKPDGVTATAADEEEDEYSGGLC
Protein: BZIP domain-containing protein (A7SQR2)
Organism: Nematostella vectensis (Starlet sea anemone)
Interaction partners:
- BZIP domain-containing protein
- AAA+ ATPase domain-containing protein
- Protein kinase domain-containing protein
- Neural retina-specific leucine zipper protein
- BZIP domain-containing protein
- Neural retina-specific leucine zipper protein
- PH domain-containing protein
- Protein kinase domain-containing protein
- histone acetyltransferase
- Uncharacterized protein
Sequence:
ADSLDIGVSEEKIVEMSVAEFTTFLEKLSDAQAKYVRDVRRRGKNKEAARICRKRKMDAIETLDDEITRLKQQRQSMFDERKDLQQETAELKRKISELESSLFSSFRDDNGRPLSSEEYSLFQGSDGAVFLGKNIASKEKKKEKSS
Protein: Small ribosomal subunit protein uS13z/uS13y/uS13x (40S ribosomal protein S18) (P34788)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Located at the top of the head of the 40S subunit, it contacts several helices of the 18S rRNA.
Subcellular location: Cytoplasm.
Interaction partners:
- Small ribosomal subunit protein eS24y
- Small ribosomal subunit protein uS14z/uS14y/uS14x
- Small ribosomal subunit protein eS30z/eS30y/eS30x
- Small ribosomal subunit protein uS12y
- Small ribosomal subunit protein uS15y
- Small ribosomal subunit protein eS1y
- Small ribosomal subunit protein uS15z
- Small ribosomal subunit protein eS28x
- Small ribosomal subunit protein eS10z
- Small ribosomal subunit protein eS6z
Sequence:
MSLVANEEFQHILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELSAAEIDNLMTIVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQHTKTTGRRGKTVGVSKKR
Protein: O-fucosyltransferase 38 (O-FucT-38) (EC 2.4.1.-) (O-fucosyltransferase family protein) (F4KF16)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Subcellular location: Membrane {ECO:0000255}; Single-pass type II membrane protein {ECO:0000305}.
Interaction partners:
Sequence:
MVKHRNSSRSIISYSSSIARFFSRKAISLYLIFVFAFTIWVLVFSSRNIQTDDDHTKHQQQHHRDLIDSESFPPPYLPPRKNLQKPYENTQLWTPPFSFGLHPCVKPTPKYKEFSESDHYITVKSNGGLNQMRTGIADIVAVAHIMNATLVIPELDKRSFWQDSSVFSDIFDEEQFIKSLRRDVKVIKKLPKEVESLPRARKHFTSWSSVGYYEEMTHLWKEYKVIHVAKSDSRLANNDLPIDVQRLRCRVLYRGLCFSPAIESLGQKLVERLKSRAGRYIALHLRYEKDMLAFTGCTYGLTDAESEELRVMRESTSHWKIKSINSTEQREEGLCPLTPKEVGIFLKGLGYSQSTVIYIAAGEIYGGDDRLSELKSRFPNLVFKETLAGNEELKGFTGHATKTAALDYIISVESDVFVPSHSGNMARAVEGHRRFLGHRRTITPDRKGLVKLFVKMERGQLKEGPKLSNFVNQMHKDRQGAPRRRKGPTQGIKGRARFRTEEAFYENPYPECICSSKEHKEP
Protein: Enolase (EC 4.2.1.11) (2-phospho-D-glycerate hydro-lyase) (2-phosphoglycerate dehydratase) (Q27727)
Organism: Plasmodium falciparum
Function: Glycolytic enzyme that catalyzes the conversion of 2-phosphoglycerate to phosphoenolpyruvate (By similarity). In addition to glycolysis, involved in various processes such as parasite development and invasion (By similarity). Plays an essential role during ookinete invasion of the mosquito vector midgut by mediating the interaction of the ookinete with the midgut epithelium and, further, by binding to mammalian host plasminogen in the blood meal, whose conversion to active plasmin promotes the invasion process (By similarity).
Subcellular location: Cytoplasm {ECO:0000250|UniProtKB:Q8IJN7}. Nucleus {ECO:0000250|UniProtKB:Q8IJN7}. Cytoplasm, cytoskeleton {ECO:0000250|UniProtKB:W7JLR6}. Cell surface {ECO:0000250|UniProtKB:Q8IJN7}. Cell membrane {ECO:0000250|UniProtKB:Q7RA60}; Peripheral membrane protein {ECO:0000305}; Cytoplasmic side {ECO:0000250|UniProtKB:Q7RA60}. Vacuole {ECO:0000250|UniProtKB:Q8IJN7}. Note=Partially localizes to the nucleus in rings and trophozoites. Localization to the nucleus and food vacuole is higher in early and mid-stage trophozoites compared to the late-stage trophozoites and schizonts (By similarity). In the nucleus, localizes to heterochromatin region (By similarity). In rings, nuclear localization is dependent on the actin cytoskeleton (By similarity). Localizes to the cell surface of merozoites (By similarity). In gametocytes, predominantly localizes to the actin cytoskeleton (By similarity). In the trophozoite food vacuole, colocalizes with hemozoin, a product of heme detoxification (By similarity). In sporozoites, localizes to punctate structures beneath the cell membrane (By similarity). Localizes to the cell surface of ookinetes, especially on the apical pellicle complex that is involved in invasion (By similarity). When phosphorylated at Thr-339, localizes to the cytoskeleton (By similarity). When phosphorylated at Ser-42, localizes to the cytoplasm (By similarity). When ubiquitinated at Lys-138, acetylated at Lys-133 and Lys-375 and phosphorylated at Tyr-139, localizes to the food vacuole (By similarity). When triubiquitinated at Lys-138, appears to colocalize with hemozoin in the food vacuole (By similarity). {ECO:0000250|UniProtKB:Q7RA60, ECO:0000250|UniProtKB:Q8IJN7, ECO:0000250|UniProtKB:W7JLR6}.
Interaction partners:
Sequence:
MAHVITRINAREILDSRGNPTVEVDLETNLGIFRAAVPSGASTGIYEALELRDNDKSRYLGKGVQKAIKNINEIIAPKLIGMNCTEQKKIDNLMVEELDGSKNEWGWSKSKLGANAILAISMAVCRAGAAPNKVSLYKYLAQLAGKKSDQMVLPVPCLNVINGGSHAGNKLSFQEFMIVPVGAPSFKEALRYGAEVYHTLKSEIKKKYGIDATNVGDEGGFAPNILNANEALDLLVTAIKSAGYEGKVKIAMDVAASEFYNSENKTYDLDFKTPNNDKSLVKTGAQLVDLYIDLVKKYPIVSIEDPFDQDDWENYAKLTAAIGKDVQIVGDDLLVTNPTRITKALEKNACNALLLKVNQIGSITEAIEACLLSQKNNWGVMVSHRSGETEDVFIADLVVALRTGQIKTGAPCRSERNAKYNQLLRIEESLGNNAVFAGEKFRLQLN
Protein: Protocadherin gamma subfamily A, 1 (A0A0A6YW27)
Organism: Mus musculus (Mouse)
Subcellular location: Cell membrane {ECO:0000256|ARBA:ARBA00004162}; Single-pass membrane protein {ECO:0000256|ARBA:ARBA00004162}.
Interaction partners:
Sequence:
MAIPEKLTGWSLLVLVCLSLELLLEAGAGNIRYSVPEETDKGSFVGSIAKDLGLETRELMERGIRIVSRGRSQLFSLNPRSGSLVTAGRIDREELCAQSTPCVVSFNILMEDEMKLLPIEVEIIDINDNTPQFQLEELELKMSEITTPGTRIPLPLGQDLDVGINSLQSYQLSANPHFSLDVQQGPEGPQQPEMVLQRPLDREKDAVHYLVLTASDGGSPIHSGTLQIHVQVVDVNDNPPAFTKAEYHVSVPENVPLGTRLLKVNATDPDEGANGRVTYSFHKVDHSVVRKFQLDAYTGELSNKEPLDFEEYKVYPMEIQAQDGAGLMARAKVLVTVLDVNDNAPEVGITSVTNTVPENFPPGTTIALISVHDQDADNNGHITCSIPGNLPFKLEKLVDNYYRLVTERTLDREQSSRHNITITATDQGTPPLSTQAHISLLVTDINDNPPVFEQDSYSVYIPENNPRGASIFSVKAQDADHNENALVTYALVEDTIQGVPLSSYFSINSDTGVVYALQSFDYEQFRDLQLRVMAHDSGNPQLSSNVSLSLFMIDQNDNAPEILYPVLPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQNSWLSYRLLKASEPGLFSVGLHTGEVRTARALLERDALKQSLVVAVQDHGQPPLSTTVTFTIAVADSIPDLLADLGSMGTPADPQDSDLTLYLVVAVAVVSCIFLAFVIVLLVLKLRHWYSSRLLQTEANGLTGLPASNFVGVDGVHAFLQTYSREISLTADSRKSHLIFPQPNYADTLISHESCEKQEFLSAPQSLLEDKEEIFSQVNL
Protein: YME1 like ATPase, isoform D (EC 3.4.24.-) (A0A0B4KFY4)
Organism: Drosophila melanogaster (Fruit fly)
Subcellular location: Membrane {ECO:0000256|ARBA:ARBA00004370}.
Interaction partners:
Sequence:
MFSTTTHSVPYLYLGNFSRKPHYYSVNRTKLHGSAGAARLSKSTSTSSRSHDLVLDLRNLLSRSSASIQGMVERAARLNGILDRRLVDDVLAKVTSMLPSMRDVRVTLEESATQIGRVQLQNYQFEVSLTGAAGSVPTGANVKVIPTITPGLLRPLFSQQQLNQIRGFKTDRSIEAEQKRNPTMTSRLKNALANSPQRLDGDTPLQAEKLRRLLAKSEEHGFNKAESLKIAFAEGYLAAANSEDSPKSGKTMKYLKTLQTIVVIVVFLGIFLSFFTTSNGSVFRIQLGNQVEVDPEEINVTFEDVKGCDEAKQELKEVVEFLKSPEKFSNLGGKLPKGVLLVGPPGTGKTLLARAVAGEAKVPFFHAAGPEFDEVLVGQGARRVRDLFKAAKARAPCVIFIDEIDSVGAKRTNSVLHPYANQTINQLLSEMDGFHQNAGVIVLGATNRRDDLDQALLRPGRFDVEVMVSTPDFTGRKEILSLYLTKILHDEIDLDMLARGTSGFTGADLENMINQAALRAAIDGAETVSMKHLETARDKVLMGPERKARLPDEEANTITAYHEGGHAIVAFYTKESHPLHKVTIMPRGPSLGHTAYIPEKERYHVTKAQLLAMMDTMMGGRAAEELVFGTDKITSGASSDLKQATSIATHMVRDWGMSDKVGLRTIEASKGLGTGDTLGPNTIEAVDAEIKRILSDSYERAKAILRKHTREHKALAEALLKYETLDADDIKAILNESQT
Protein: Protein LURP-one-related 12 (Q9LVZ8)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Might be related to the phospholipid scramblase and tubby-like superfamily of membrane tethered transcription factors.
Interaction partners:
- Protein LURP-one-related 7
Sequence:
MELVEETIPKEGKKMGERIVVDKAYLYQEDKPLTVCKTSLFYTGDGFAAYDCRGDIIFRVDSYGPDTRDNDEIVLMDATGKCLLTVKRKRPTLHQRWEGFLGERSEGQKPIFSVRRSSIIGRCTMEVEVYDGTGEEYIIDGDFSQRSCLIYDTKKCTVAEIKRKVDASTNVMLGRDVFTLEIKPGFDGAFAMGLVVVLDQINGDDPVEIGDEQVHPFVED
Protein: F-box protein KIB3 (Protein KINK SUPPRESSED IN BZR1-1D 3) (Q9ZW91)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Component of SCF(ASK-cullin-F-box) E3 ubiquitin ligase complexes, which may mediate the ubiquitination and subsequent proteasomal degradation of target proteins. Required for brassinosteroid (BR) signal transduction. Mediates ASK7/BIN2/SK21 inactivation both by competing with substrate binding (e.g. BZR1) and by promoting its ubiquitination and subsequent proteasomal degradation.
Subcellular location: Cytoplasm {ECO:0000250|UniProtKB:Q9SU05}. Nucleus, nucleolus {ECO:0000250|UniProtKB:Q9SU05}.
Interaction partners:
Sequence:
MSDSDGKNMEGRFEAAYIVDLVRLILERLSFVDFHRARCVSSTWYVASKSVIGVTNPTTPWIILFPNKNVENNGSCKLFDPHENKTYIIRDLGFDMSTSRCLASSGSWFLMFDHRADFHLLNLFTRERILLPSLESIDGERYMRFKRPISGSHIEIDKAVLWVDDKSRDYFVFCNLSSYVAYHHKRGDDNNSWKVLQPIKHQGCVDMVFKESKLYMISAHQCLTVFDFSGGVSPVEMECASFGSSVCVNRFHMKYFSNLAVTLSGEVLIIVGGKMDSSPEAKCVFTVNKMDPKSSEFTVLIKSIGDEALLLDLGITVPAKDGVMRDCIYFSNDQYHRCCGISLRDGYNADRICVYQIGSDYVVQEFEHLTTSSTKLFKDARWFFPTFGDKCCFHLWILHPVILQAKKLQKSNLKGTKPVTREKTTIVNNVDGTTTQREKTTKGKNMIGKK
Protein: GTP-binding protein Di-Ras1 (Distinct subgroup of the Ras family member 1) (Ras-related inhibitor of cell growth) (Rig) (Small GTP-binding tumor suppressor 1) (O95057)
Organism: Homo sapiens (Human)
Function: Displays low GTPase activity and exists predominantly in the GTP-bound form.
Subcellular location: Cell membrane {ECO:0000305}; Lipid-anchor {ECO:0000305}; Cytoplasmic side {ECO:0000305}.
Interaction partners:
- Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit beta isoform
- Rap1 GTPase-GDP dissociation stimulator 1
Sequence:
MPEQSNDYRVVVFGAGGVGKSSLVLRFVKGTFRDTYIPTIEDTYRQVISCDKSVCTLQITDTTGSHQFPAMQRLSISKGHAFILVFSVTSKQSLEELGPIYKLIVQIKGSVEDIPVMLVGNKCDETQREVDTREAQAVAQEWKCAFMETSAKMNYNVKELFQELLTLETRRNMSLNIDGKRSGKQKRTDRVKGKCTLM
Protein: Small ribosomal subunit protein uS4c (30S ribosomal protein S4, chloroplastic) (Q6ENH2)
Organism: Oryza nivara (Indian wild rice) (Oryza sativa f. spontanea)
Function: One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.
Subcellular location: Plastid, chloroplast.
Interaction partners:
- 40S ribosomal protein S16
- Uncharacterized protein
- Large ribosomal subunit protein uL4 C-terminal domain-containing protein
- Small ribosomal subunit protein uS14c
- Small ribosomal subunit protein uS8c
- 40S ribosomal protein S30
- Small ribosomal subunit protein eS21
- Small ribosomal subunit protein eS31 domain-containing protein
- Small ribosomal subunit protein uS7cz/uS7cy
- 40S ribosomal protein S15
Sequence:
MSRYRGPRFKKIRRLGALPGLTRKTPKSGSNLKKKFHSGKKEQYRIRLQEKQKLRFHYGLTERQLLRYVHIAGKAKSSTGQVLLQLLEMRLDNILFRLGMASTIPEARQLVNHRHILVNGRIVDIPSFRCKPRDIITTKDNQRSKRLVQNSIASSDPGKLPKHLTIDTLQYKGLVKKILDRKWVGLKINELLVVEYYSRQT
Protein: UHRF1-like protein (J9VHE9)
Organism: Cryptococcus neoformans var. grubii serotype A (strain H99 / ATCC 208821 / CBS 10515 / FGSC 9487) (Filobasidiella neoformans var. grubii)
Function: Involved in the maintenance of DNA methylation. Binds hemimethylated DNA.
Subcellular location: Nucleus {ECO:0000255|PROSITE-ProRule:PRU00358}.
Interaction partners:
Sequence:
MMRYEDVSQLSLMNLTYEEQRLENIRKNEDLLRSLGLGAPSEATTLATPSNLKTAGNQRRYNDTLVGKSNTGRNRSDSPRKRPTKDREDLNLVPQSAIKRRQSVRLGGKEKPNYTREQVTFNSDRDTPNTPSRQIKSTHSHPGSEEEDIRQVKTRTLGVRVHNPKTFGHIPGIGVGKWWATRMEASADAVHAPTVAGISGNAHEGAWSVALSGGYPDDIDLGYAFTYTGCGGRDLKGTKQNPKNLRTAPQTSHQSFDNPLNAALKRSAETRNPVRVIRGFKLQSKYAPPTGYRYDGLYIVEKAWMAKGLTNGLMVCRYAFKRMDDQGPLPQKDLDHDDDNKA
Protein: (S)-ureidoglycine aminohydrolase cupin domain-containing protein (Q9I081)
Organism: Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Interaction partners:
- 4-vinyl reductase 4VR domain-containing protein
- Glycine betaine monooxygenase oxygenase subunit
- Glutathione-independent formaldehyde dehydrogenase
- Probable glycine betaine-binding protein
- Glycine betaine monooxygenase reductase subunit
- Membrane dipeptidase
- Sarcosine oxidase subunit beta subunit beta)
- Sarcosine oxidase delta subunit
- Electron transfer flavoprotein alpha/beta-subunit N-terminal domain-containing protein
- L-serine dehydratase
Sequence:
MSDFITVLRDTCPVPVLDATKWKRIDGDPHTVNLNAYASADGSKLMGTWICTPGKWEVNYERWEFCHFLDGYCIITPEGEQPVHLRAGDVFVIEPGLRGTWEVVETVRKYFVFA
Protein: Small ribosomal subunit protein uS4y (40S ribosomal protein S9-2) (Q9FLF0)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Interaction partners:
- Small ribosomal subunit protein uS14z/uS14y/uS14x
- Small ribosomal subunit protein uS10z/uS10x
- Small ribosomal subunit protein eS24z
- Small ribosomal subunit protein uS15z
- Small ribosomal subunit protein eS19x
- Small ribosomal subunit protein eS30z/eS30y/eS30x
- Small ribosomal subunit protein uS15y
- Small ribosomal subunit protein uS2y
- Small ribosomal subunit protein uS2z
- Small ribosomal subunit protein eS6y
Sequence:
MVNVRFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYTLSRIRNAARELLTLDEKNPRRIFEGEALLRRMNRYGLLDETQNKLDYVLALTVENFLERRLQTIVFKSGMAKSIHHARVLIRQRHIRVGRQLVNIPSFMVRVESQKHVDFSLTSPFGGGRPGRVKRRNERAGAKKASGGDGDEDDEE