wanglab/gogpt-training-data huggingface dataset:
Protein: Peptidoglycan recognition protein 1 (Peptidoglycan recognition protein short) (PGRP-S) (O75594)
Organism: Homo sapiens (Human)
Function: Innate immunity protein that plays several important functions in antimicrobial and antitumor defense systems. Acts as a pattern receptor that binds to murein peptidoglycans (PGN) of Gram-positive bacteria and thus provides bactericidal activity. Forms an equimolar complex with heat shock protein HSPA1A and induces programmed cell death through apoptosis and necroptosis in tumor cell lines by activating the TNFR1 receptor on the target cell membrane. In addition, acts in complex with the Ca(2+)-binding protein S100A4 as a chemoattractant able to induce lymphocyte movement. Mechanistically, this complex acts as a ligand of the chemotactic receptors CCR5 and CXCR3 which are present on the cells of the immune system. Promotes also the activation of lymphocytes that become able to kill virus-infected cells as well as tumor cells by modulating the spectrum of their target-cell specificity. Induction of cytotoxicity on monocyte surface requires interaction with TREM1 receptor.
Subcellular location: Secreted {ECO:0000269|PubMed:16354652}. Cytoplasmic granule {ECO:0000250}.
Interaction partners:
- Heat shock 70 kDa protein 4
- Triggering receptor expressed on myeloid cells 1
- Cathelicidin antimicrobial peptide
- Defensin alpha 4
- Lactotransferrin
- Cathepsin G
- Neutrophil collagenase
- Nucleotide-binding oligomerization domain-containing protein 1
- Bactericidal permeability-increasing protein
- Nucleotide-binding oligomerization domain-containing protein 2
Sequence:
MSRRSMLLAWALPSLLRLGAAQETEDPACCSPIVPRNEWKALASECAQHLSLPLRYVVVSHTAGSSCNTPASCQQQARNVQHYHMKTLGWCDVGYNFLIGEDGLVYEGRGWNFTGAHSGHLWNPMSIGISFMGNYMDRVPTPQAIRAAQGLLACGVAQGALRSNYVLKGHRDVQRTLSPGNQLYHLIQNWPHYRSP
Protein: Male determiner protein Nix (A0A0F6MY85)
Organism: Aedes aegypti (Yellowfever mosquito) (Culex aegypti)
Function: Male determiner protein (M-factor) that controls male somatic sexual differentiation. Acts as a dominant factor that regulates the mRNA splicing of doublesex (dsx) or fruitless (fru) transcripts and promotes expression of male splice forms of dsx and fru.
Interaction partners:
Sequence:
MCKKRNAEINAEFDIIKKYCIYIGNIPFFASKNDVVVKFAEYGETCNIYMQSNKPHCDVKPAIVRYRSRKSVDKSLCLNNSKFGNTILIVLPLSLPYSRYLLTYDTCIVVYINDKNSCKTSMAELYDEFQKIGDIQNMFKTTNNMIYINFESEKSMQLSLATKPFLINNNIFKIKKVERNINMCGLNSESQDFSTNLKKKLLYNRSIGIFGLPSNATEERIAQIFSRFGDIQKITLICDVVGNSKQYGFIYYKKRTSANAAKVIMDGENFEGNKISVRFVPEKKVFKN
Protein: Large ribosomal subunit protein eL20A (60S ribosomal protein L20-A) (SP-L17) (P0CT68)
Organism: Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Subcellular location: Cytoplasm {ECO:0000269|PubMed:16823372}.
Interaction partners:
- Large ribosomal subunit protein eL14
- Large ribosomal subunit protein eL18A
- Large ribosomal subunit protein eL31
- Large ribosomal subunit protein eL6
- Large ribosomal subunit protein uL24
- Large ribosomal subunit protein uL29
- Large ribosomal subunit protein eL13
- Large ribosomal subunit protein eL21A
- Large ribosomal subunit protein uL6A
- Large ribosomal subunit protein uL30B
Sequence:
MALKEYQVVGRKVPTEHEPVPKLFRMRLFAPNESVAKSRYWYFLKMINKVKKATGEIVAINEISEPKPLKAKVFGIWIRYDSRSGTHNMYKEFRDTTRVGAVEAMYADMAARHRARFRSIRILKVVEVEKKEDVRRNYVKQLLNPHLKFPLPHRRTGVVGLAGKKVFAPHRPSTFY
Protein: Paired box protein 5 homolog (Egg laying defective egl-38) (G5ED14)
Organism: Caenorhabditis elegans
Function: Transcription factor. Binds to specific DNA sequence motifs in regulatory elements, for example in the genes encoding transcription factor lin-48, apoptosis regulator ced-9 and neuropeptide-like protein nlp-2. Specifies cell fate, playing an essential role in embryonic and larval development. Involved in morphogenesis of the vulva and uterus in hermaphrodites and of the rectal epithelium of the tail in males. Plays multiple roles in the development of the egg-laying system, acting in both lin-3/EGF-pathway-dependent and -independent processes. Positively regulates expression of neuropeptide-like proteins nlp-2 and nlp-7 in uvl cells in an EGF-pathway-dependent manner. Involved in negatively modulating apoptosis in germline and somatic cells, acting in partial redundancy with transcription factor pax-2, probably by directly regulating transcription of ced-9. Positively regulates transcription of lin-48 in hindgut cells and functions in the development of the hindgut.
Subcellular location: Nucleus {ECO:0000255|PROSITE-ProRule:PRU00381, ECO:0000305|PubMed:11532910, ECO:0000305|PubMed:17021039, ECO:0000305|PubMed:31398431}. Chromosome {ECO:0000269|PubMed:17021039}.
Interaction partners:
- Transcription factor ovo-like homolog lin-48
- Protein lin-11
- T-box protein 12
- ETS domain-containing protein
- Homeobox domain-containing protein
- Nuclear Hormone Receptor family
- Homeobox protein ceh-32
- Cell death protein 3
Sequence:
MEPIWRNYPYPTYPGHHNFQFDPLLSDGSHTGVNQLGGVFVNGRPLADTVRAQIVEMSQHGTRPCDISRQLKVSHGCVSKILGRYYSTGSVRPGVIGGSKPKVATPRVVECIAGYKRANPTMFAWEIRQKLIEDQICGEENVPSVSSINRIVRNKSFMAQLAAPTSVTSSAARPSSATSHHQRSPPRGVQQHMQQSTSVQQLQQLQLTSAATVNSLMTPPAFAMPGTAYSINGLLGTLPQPSLLDDKFTNLSTQSADMSLVYSTGLVGEHDWTMRTPMVILPQNYCGQL
Protein: At5g23920 (Transmembrane protein) (Q9FF88)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Interaction partners:
Sequence:
MSEEIREKDLTDSKPSPPQPPPKRGLISRKRQLVFLSFMILLAAKGLVGIGEIAFVILCYIYLYEFLSRFAFPRKQTEQKKRLSNPKNKLFQAYFLATAIIGLLFPLCYIGDGIYRGDIHGAGAAAPHLFLLSGQAFTEPIGFSDKYSMPIGILGPVFYNARRIFALLDWVKAEFSDTQRPGGPLRLYGGRVIASVNTVMWFYNLFGLLLPVFLPRSCEIYFSGDNKDD
Protein: Superoxide dismutase [Mn] 1, mitochondrial (EC 1.15.1.1) (P31161)
Organism: Caenorhabditis elegans
Function: Destroys superoxide anion radicals which are normally produced within the cells and which are toxic to biological systems.
Subcellular location: Mitochondrion matrix.
Interaction partners:
- Superoxide dismutase
- Superoxide dismutase
- Extracellular superoxide dismutase
- Large ribosomal subunit protein bL17m
- Superoxide dismutase 2, mitochondrial
- Large ribosomal subunit protein uL3m
- Ribosomal protein L13
- Glutathione peroxidase 1
- Small ribosomal subunit protein uS17
- Small ribosomal subunit protein uS5m
Sequence:
MLQNTVRCVSKLVQPITGVAAVRSKHSLPDLPYDYADLEPVISHEIMQLHHQKHHATYVNNLNQIEEKLHEAVSKGNVKEAIALQPALKFNGGGHINHSIFWTNLAKDGGEPSAELLTAIKSDFGSLDNLQKQLSASTVAVQGSGWGWLGYCPKGKILKVATCANQDPLEATTGLVPLFGIDVWEHAYYLQYKNVRPDYVNAIWKIANWKNVSERFAKAQQ
Protein: CCCTC-binding factor like (V9GY73)
Organism: Homo sapiens (Human)
Interaction partners:
Sequence:
MAATEISVLSEQFTKIKELELMPEKGLKEEEKDGVCREKDHRSPSELEAERTSGAFQDSVLEEEVELVLAPSEESEKYILTLQTVHFTSEAVELQDMSLLSIQQQEGVQVVVQQPGPGLLWLEEGPRQSLQQCVAISIQQELYSPQEMEVLQFHALEENVMVASEDSKLAVSLAETTGLIKLEEEQEKNQLLAERTKEQLFFVETMSGDERSDEIVLTVSNSNVEEQEDQPTAGQADAEKAKSTKNQRKTKGAKGTFHCDVCMFTSSRMSSFNRHMKTHTSEKPHLCHLCLKTFRTVTLLRNHVNTHTGTRPYKCNDCNMAFVTSGELVRHRRYKHTHEKPFKCSMCKYASVEASKLKRHVRSHTGERPFQCCQCSYASRDTYKLKRHMRTHSGEKPYECHICHTRFTQSGTMKIHILQKHGENVPKYQCPHCATIIARKSDLRVHMRNLHAYSAAELKCRYCSAVFHERYALIQHQKTHKNEKRFKCKHCSYACKQERHMTAHIRTHTGEKPFTCLSCNKCFRQKQLLNAHFRKYHDANFIPTVYKCSKCGKGFSRWILWVGNSEVAELGGPGSGPLLRLQSGCPPGLHHPKAGLGPEDPLPGQLRHTTAGTGLSSLLQGPLCRAA
Protein: DNA-directed RNA polymerase III subunit RPC6 (Q57WC7)
Organism: Trypanosoma brucei brucei (strain 927/4 GUTat10.1)
Subcellular location: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
Interaction partners:
- DNA-directed RNA polymerase subunit
- DNA-directed RNA polymerases I, II, and III subunit RPABC3
- DNA-directed RNA polymerase subunit beta
- DNA-directed RNA polymerase III subunit RPC3
- DNA-directed RNA polymerase subunit
- Plastid-encoded RNA polymerase subunit alpha
- RNA polymerase III subunit Rpc25 domain-containing protein
- DNA-dependent RNA polymerases, putative
- DNA-directed RNA polymerases I, II, and III subunit RPABC5
- Transcription factor, putative
Sequence:
MTSVPGVNNAEQRILASLALAGQGALLLATLQQDLGLHHRTMAAALRGLMEGGRVVLRHGNREGDMYVALVNSMPEGPSLVLDAIRASGNSGIDQAALCSSLRLPKGEIIKSLQMLLSQKRIKERRCFSNRAKRIYLLFEFEPSDEVTGGTFYGGEDSREMDIGFVDEMRRRIMLLVAQRHSVSLEQITQHLQEARGGSSSADVNATAGGTVVMTTSPNGTVATLLGDSTGSCSGGGSVGAGCVKRISQRDAQLLVQTLVLDGLLDCVTPSPAVPAQYQLATGRNVMRHFSAVPTAAGAGSGTKWVPAPVSQPSAWAMPAVGLPCMGCAQLHVCTASGNGVVNPRNCAYLKEWMS
Protein: MADS-box transcription factor 29 (OsMADS29) (Q6H711)
Organism: Oryza sativa subsp. japonica (Rice)
Function: Probable transcription factor.
Subcellular location: Nucleus {ECO:0000305}.
Interaction partners:
Sequence:
MGRGKIEIKRIENATNRQVTFSKRRGGLLKKANELAVLCDARVGVVIFSSTGKMFEYCSPTCSLRELIEHYQTVTNTHFEEINHDQQIFVEMTRMRNEMEKLDGGIRRFTGDDLSNLTLADINDLEQQLEFSVTKVRARKHQLLNQQLDNLRRKEHILEDQNSFLCRMINENHHQAAVGGGDVKAMVEMAPVLSMLTAAPAYYGEESSSTALQLTPPLHAVDAAAAAGFRLQPTQPNLQDPGCSSSSFHAAAAGHGLQLW
Protein: Hydrogenase maturation factor HypD (Hydrogenase isoenzymes formation protein HypD) (P24192)
Organism: Escherichia coli (strain K12)
Function: Involved in the maturation of [NiFe] hydrogenases. Involved in the biosynthesis of the Fe(CN)(2)CO cofactor. HypD may act as a scaffold on which the Fe(CN)(2)CO cofactor is formed. In complex with HypC, accepts the cyanide ligand generated by HypF and HypE, and also coordinates the carbon monoxide ligand. Required for the formation of all three hydrogenase isoenzymes (Probable).
Interaction partners:
- Hydrogenase maturation factor HypC
- Carbamoyl dehydratase HypE
- Hydrogenase maturation factor HybG
- Hydrogenase maturation factor HypB
- Hydrogenase maturation factor HypA
- Carbamoyltransferase HypF
- Hydrogenase-2 large chain
- Hydrogenase maturation factor HybF
- Formate hydrogenlyase subunit 5
- Transcriptional regulatory protein ZraR
Sequence:
MRFVDEYRAPEQVMQLIEHLRERASHLSYTAERPLRIMEVCGGHTHAIFKFGLDQLLPENVEFIHGPGCPVCVLPMGRIDTCVEIASHPEVIFCTFGDAMRVPGKQGSLLQAKARGADVRIVYSPMDALKLAQENPTRKVVFFGLGFETTMPTTAITLQQAKARDVQNFYFFCQHITLIPTLRSLLEQPDNGIDAFLAPGHVSMVIGTDAYNFIASDFHRPLVVAGFEPLDLLQGVVMLVQQKIAAHSKVENQYRRVVPDAGNLLAQQAIADVFCVNGDSEWRGLGVIESSGVHLTPDYQRFDAEAHFRPAPQQVCDDPRARCGEVLTGKCKPHQCPLFGNTCNPQTAFGALMVSSEGACAAWYQYRQQESEA
Protein: Calcium-activated chloride channel regulator 1 (A0A0G2JWX9)
Organism: Rattus norvegicus (Rat)
Subcellular location: Secreted, extracellular space {ECO:0000256|ARBA:ARBA00004239}.
Interaction partners:
- Zymogen granule membrane protein 16
- Mucin-2
- Anterior gradient 2, protein disulphide isomerase family member
Sequence:
MGSLKSPVFLLVLYLLEGVLSNSLIQLNNNGYEGIVIAIDHDVPEDEALIQRIKDMVTQASPYLFEATGKRFYFKNVAILIPENWNTKPEYKRPKLETLKNADVLVSTMSPIGNDEPYTEHIGACGERGIRIHLTPDFLAGKKQTEYGPQDRTFVHEWAHFRWGVFDEYNNNEKFYLSNGKPQAVRCSATITGKHVVRRCQGGSCVTNGKCVIDRVTGLYKDNCVFIPDKNQREKASIMFNQNINSVVEFCTEKNHNKEAPNAQNQRCNLRSTWEVIQESEDFKQTTPMTAQPPAPTFSLLQTRQRIVCLVLDKSGSMQSDNRLNRMNQASRLFLLQTVEQGSWVGMVTFDSTAYVQSELTQLNSGADRDLLIKRLPTVASGGTSICSGLQAAFTSIKKKYPTDGAEIVLLTDGEDNTISSCFDLVKNSGAIIHTVALGPSAAKELEQLSKMTGGLQTYSSDQIQNNGLVDAFAALSSGNAAISQHSIQLESRGVNLQNKQWMNGSVIVDSTVGKDTLFLVTWTTNSPSIFIWDPSGVQQSGFVLDTNTKVAYLQVPGIAKVGFWKYSIQASSQTLTLTVTSRAASATLPPITVTPVVNKNTGKFPSPVTVYASIRQGASPILRASVTALIESVNGKTVTLELLDNGAGADATKNDGVYSRFFTAFDANGRYSIKIWALGGVTADRQRMAPQRNGVMYIDGWIEDDGEIKMNPPHPETGNVQDSQVCFSRTSSGGSFVATNVPAAPIPDLFPPCQITDLKASIQGQNLVNLTWTAPGDDYDHGRASSYIIRISTSIVDLRNNFSTSLEVNTTDLIPKEASSEEMFEFELDNSFGNGTDVFIAIQAVDKSNLKSEISNIARVSLFIPAQEPPEDSTPSYPEVSINSTIPGIHVLNIVWKWLGEMHVTLGLH
Protein: Immunoglobulin lambda-like polypeptide 5 (G lambda-1) (Germline immunoglobulin lambda 1) (B9A064)
Organism: Homo sapiens (Human)
Subcellular location: Secreted {ECO:0000250}.
Interaction partners:
- Immunoglobulin heavy variable 4-38-2
- Immunoglobulin heavy variable 3-15
- B-cell antigen receptor complex-associated protein alpha chain
- Immunoglobulin heavy constant delta
- Immunoglobulin heavy variable 3-43D
- B-cell antigen receptor complex-associated protein beta chain
- Microtubule-associated protein tau
- Leukocyte-associated immunoglobulin-like receptor 1
- 5'-nucleotidase
- Hepcidin
Sequence:
MRPKTGQVGCETPEELGPGPRQRWPLLLLGLAMVAHGLLRPMVAPQSGDPDPGASVGSSRSSLRSLWGRLLLQPSPQRADPRCWPRGFWSEPQSLCYVFGTGTKVTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADGSPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
Protein: Small ribosomal subunit protein eS12 (40S ribosomal protein S12) (Q03253)
Organism: Trypanosoma brucei brucei
Interaction partners:
Sequence:
MAEETSLVADKVPEPAVIDAVADAMPDSLEDALRIVLMKARETNGLICGLSEVTRALDRRTAHLCVLADDCEDEEYKKLVTALAKQNNIDLVSMDEREKLAQWAGLTRMAADGSVRKTLKCSCLAVRDFGERTKALDYLLSQLQ
Protein: Transmembrane protein (Q584D2)
Organism: Trypanosoma brucei brucei (strain 927/4 GUTat10.1)
Interaction partners:
Sequence:
MSLWPFRTGNDERFQVTSTEETIYDAIKNEMPAYPYGTEVDRYLEWRWRRGLVQSIFPATCYGAFVGFAVGYRQARVEGRYIGRYKVVWRYSSTFAAVGLLTTAFHHVLVVRNNYHDRFYYPMMAGASGAVVLTVASQMGTLGQGMLAGSLVGVLYTLSCYGMTYYHRRRLKMFLRQQQTQQVPVHKVSPELQRMYRAYLYDNRPLEEKDVMVRRAVVLSMSEDDTCLDAKRVLQNMTPEIYDWVNFPDWWPLKFPQQTEEERMIYERQRDEEVERRKRAFLETDDGALIKRVNRAKKYRDL
Protein: Protein LSM12 (Q3MHD2)
Organism: Homo sapiens (Human)
Function: Nicotinic acid adenine dinucleotide phosphate (NAADP) binding protein. Confers NAADP sensitivity to the two pore channel complex (TPCs) by acting as TPC accessory protein necessary for NAADP-evoked Ca(2+) release.
Subcellular location: Cytoplasm {ECO:0000269|PubMed:34362892}. Note=Colocalizes with TPCN2. {ECO:0000269|PubMed:34362892}.
Interaction partners:
- Ataxin-2-like protein
- Ataxin-2
- rRNA N
- Probable ATP-dependent RNA helicase DDX6
- FMR1-interacting protein NUFIP2
- U6 snRNA-associated Sm-like protein LSm3
- U6 snRNA-associated Sm-like protein LSm2
- tRNA selenocysteine 1-associated protein 1
- Putative uncharacterized protein C6orf52
- MAPK regulated corepressor interacting protein 2
Sequence:
MAAPPGEYFSVGSQVSCRTCQEQRLQGEVVAFDYQSKMLALKCPSSSGKPNHADILLINLQYVSEVEIINDRTETPPPLASLNVSKLASKARTEKEEKLSQAYAISAGVSLEGQQLFQTIHKTIKDCKWQEKNIVVMEEVVITPPYQVENCKGKEGSALSHVRKIVEKHFRDVESQKILQRSQAQQPQKEAALSS
Protein: Protein hob3 (Homolog of Bin3) (Q9UUM7)
Organism: Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Function: Involved in cytokinesis and septation where it has a role in the localization of F-actin.
Subcellular location: Cytoplasm, cytoskeleton.
Interaction partners:
- Rho guanine nucleotide exchange factor gef1
- Protein hob1
- Probable clathrin heavy chain
- Actin-binding protein wsp1
- Cell division control protein 42 homolog
- Rho guanine nucleotide exchange factor gef3
- Protein app1
- Actin
- Rho guanine nucleotide exchange factor scd1
Sequence:
MSWHGFKKAVNRAGTSVMMKTGHVERTVDREFETEERRYRTMESAAKKLQKEAKGYLDALRAMTASQTRIANTIDAFYGDAGSKDGVSAYYRQVVEDLDADTVKELDGPFRTTVLDPISRFCSYFPDINAAITKRNHKLLDHDAMRAKVQKLVDKPSNDTTKLPRTEKEAAMAKEVYETLNNQLVSELPQLIALRVPYLDPSFEALVKIQLRFCREGYEKMAQVQQYFDNSVREDYSNGLLDDKVEQVLQSMRDLSIAGLNNSQ
Protein: Zinc finger and BTB domain-containing protein 20 (BTB/POZ domain zinc finger factor HOF) (Zinc finger protein 288) (Q8K0L9)
Organism: Mus musculus (Mouse)
Function: May be a transcription factor that may be involved in hematopoiesis, oncogenesis, and immune responses (By similarity). Plays a role in postnatal myogenesis, may be involved in the regulation of satellite cells self-renewal.
Subcellular location: Nucleus {ECO:0000305|PubMed:11744704}.
Interaction partners:
Sequence:
MLERKKPKTAENQKASEENEITQPGGSSAKPALPCLNFEAVLSPAPALIHSTHSLTNSHAHTGSSDCDISCKGMTERIHSINLHNFSNSVLETLNEQRNRGHFCDVTVRIHGSMLRAHRCVLAAGSPFFQDKLLLGYSDIEIPSVVSVQSVQKLIDFMYSGVLRVSQSEALQILTAASILQIKTVIDECTRIVSQNVGDVFPGIQDSGQDTPRGTPESGTSGQSSDTESGYLQSHPQHSVDRIYSALYACSMQNGSGERSFYSGAVVSHHETALGLPRDHHMEDPSWITRIHERSQQMERYLSTTPETTHCRKQPRPVRIQTLVGNIHIKQEMEDDYDYYGQQRVQILERNESEECTEDTDQAEGTESEPKGESFDSGVSSSIGTEPDSVEQQFGAAAPRDGQAEPAQPEQAAEAPAESSAQPNQLEPGASSPERSNESEMDNTVITVSNSSDKGVLQQPSVNTSIGQPLPSTQLYLRQTETLTSNLRMPLTLTSNTQVIGTAGNTYLPALFTTQPAGSGPKPFLFSLPQPLTGQQTQFVTVSQPGLSTFTAQLPAPQPLASSAGHSTASGQGDKKPYECTLCNKTFTAKQNYVKHMFVHTGEKPHQCSICWRSFSLKDYLIKHMVTHTGVRAYQCSICNKRFTQKSSLNVHMRLHRGEKSYECYICKKKFSHKTLLERHVALHSASNGTPPAGTPPGARAGPPGVVACTEGTTYVCSVCPAKFDQIEQFNDHMRMHVSDG
Protein: Trafficking protein particle complex subunit 1 (BET5 homolog) (Multiple myeloma protein 2) (MUM-2) (Q9Y5R8)
Organism: Homo sapiens (Human)
Function: May play a role in vesicular transport from endoplasmic reticulum to Golgi.
Subcellular location: Golgi apparatus, cis-Golgi network {ECO:0000250}. Endoplasmic reticulum {ECO:0000250}.
Interaction partners:
- Trafficking protein particle complex subunit 6A
- Trafficking protein particle complex subunit 2-like protein
- Trafficking protein particle complex subunit 9
- Trafficking protein particle complex subunit 3
- Trafficking protein particle complex subunit 8
- Trafficking protein particle complex subunit 5
- Trafficking protein particle complex subunit 4
- Trafficking protein particle complex subunit 2
- Trafficking protein particle complex subunit 10
- Trafficking protein particle complex subunit 6B
Sequence:
MTVHNLYLFDRNGVCLHYSEWHRKKQAGIPKEEEYKLMYGMLFSIRSFVSKMSPLDMKDGFLAFQTSRYKLHYYETPTGIKVVMNTDLGVGPIRDVLHHIYSALYVELVVKNPLCPLGQTVQSELFRSRLDSYVRSLPFFSARAG
Protein: Poly(RC) binding protein 2 (Q6AYU5)
Organism: Rattus norvegicus (Rat)
Interaction partners:
- Serine/arginine-rich splicing factor 3
- Natural resistance-associated macrophage protein 2
- Polypyrimidine tract-binding protein 1
- Heterogeneous nuclear ribonucleoprotein D0
- Ferroportin
- Heterogeneous nuclear ribonucleoprotein A3
- Heterogeneous nuclear ribonucleoprotein L
- Heterogeneous nuclear ribonucleoprotein A1
- Heterogeneous nuclear ribonucleoprotein C
- Heterogeneous nuclear ribonucleoproteins A2/B1
Sequence:
MDTGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPYRPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSGIESSSPEVKGYWGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLINVRLSSETGGMGSS
Protein: Actin-related protein 2/3 complex subunit 5 (O61861)
Organism: Caenorhabditis elegans
Subcellular location: Cytoplasm, cytoskeleton {ECO:0000256|ARBA:ARBA00004245}.
Interaction partners:
- Probable actin-related protein 2/3 complex subunit 3
- Probable actin-related protein 2/3 complex subunit 2
- Actin-related protein 2
- Probable actin-related protein 2/3 complex subunit 4
- Actin-related protein 3
- Actin-related protein 2/3 complex subunit
- SPIN90/Ldb17 leucine-rich domain-containing protein
- CRIB domain-containing protein
- Probable actin-related protein 2/3 complex subunit 5
- GPI ethanolamine phosphate transferase 1
Sequence:
MSKNMQNTSYRKLDVDSFDPEQYDENDETVDTPGLGPDERAVQGFLSSNRLEDALHAALLSPPLKTKDQNVKDRATQLVTKVLQSFKNAEIEATVQKLSIEESDILMKYVYKSMEIGADAAVCQSLLAWHAQLVAKFGHGAIMRVFSGRQRL
Protein: WASH complex subunit 3 (Coiled-coil domain-containing protein 53) (Q9Y3C0)
Organism: Homo sapiens (Human)
Function: Acts as a component of the WASH core complex that functions as a nucleation-promoting factor (NPF) at the surface of endosomes, where it recruits and activates the Arp2/3 complex to induce actin polymerization, playing a key role in the fission of tubules that serve as transport intermediates during endosome sorting.
Subcellular location: Early endosome {ECO:0000305}.
Interaction partners:
- WASH complex subunit 5
- WASH complex subunit 1
- WASH complex subunit 4
- WASH complex subunit 2C
- WASH complex subunit 2A
- F-actin-capping protein subunit alpha-1
- F-actin-capping protein subunit beta
- Heat shock factor-binding protein 1
- Nucleoporin Nup37
- Actin nucleation-promoting factor WAS
Sequence:
MDEDGLPLMGSGIDLTKVPAIQQKRTVAFLNQFVVHTVQFLNRFSTVCEEKLADLSLRIQQIETTLNILDAKLSSIPGLDDVTVEVSPLNVTSVTNGAHPEATSEQPQQNSTQDSGLQESEVSAENILTVAKDPRYARYLKMVQVGVPVMAIRNKMISEGLDPDLLERPDAPVPDGESEKTVEESSDSESSFSD
Protein: Uncharacterized protein, isoform D (X2J6G8)
Organism: Drosophila melanogaster (Fruit fly)
Interaction partners:
Sequence:
MFLLGICFICSLNPLVLNAFPVESQADSKDLSVLNAPLTDPADYPDLTNGLTDAEVQESLKDLTLDDLNSLNKLLDERLGRDEDVDSDESESNNTW
Protein: ATP-dependent RNA helicase DDX51 (EC 3.6.4.13) (DEAD box protein 51) (Q8N8A6)
Organism: Homo sapiens (Human)
Function: ATP-binding RNA helicase involved in the biogenesis of 60S ribosomal subunits.
Subcellular location: Nucleus, nucleolus {ECO:0000250}.
Interaction partners:
- Nucleolar protein 8
- Ribosomal RNA-processing protein 8
- Nucleolar protein 58
- RNA-binding protein 34
- GTP-binding protein 4
Sequence:
MALFYVARYPGPDAAAAAGPEGAEAGAHGRARALLERLQSRARERQQQREPAQTEAAASTEPATRRRRRPRRRRRVNDAEPGSPEAPQGKRRKADGEDAGAESNEEAPGEPSAGSSEEAPGEPSAGSSEEAPGERSTSASAEAAPDGPALEEAAGPLVPGLVLGGFGKRKAPKVQPFLPRWLAEPNCVRRNVTEDLVPIEDIPDVHPDLQKQLRAHGISSYFPVQAAVIPALLESAACGFLVGRGGYRPSDLCVSAPTGSGKTLAFVIPVVQALLSRVVCHIRALVVLPTKELAQQVSKVFNIYTDATPLRVSLVTGQKSLAKEQESLVQKTADGYRCLADIVVATPGRLVDHIDQTPGFSLQQLRFLIIDEADRMIDSMHQSWLPRVVAAAFQSEDPADPCALLQRRQAQAVTAASTCCPQMPLQKLLFSATLTQNPEKLQQLGLHQPRLFSTGLAHRGLEDTDGDGDSGKYAFPVGLTHHYVPCSLSSKPLVVLHLVLEMGFSRVLCFTNSRENSHRLFLLVQAFGGVDVAEFSSRYGPGQRRMILKQFEQGKIQLLISTDATARGIDVQGVELVVNYDAPQYLRTYVHRVGRTARAGKTGQAFTLLLKVQERRFLRMLTEAGAPELQRHELSSKLLQPLVPRYEEALSQLEESVKEERKQRAA
Protein: Probable acyl-CoA dehydrogenase FadE4 (P96414)
Organism: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Interaction partners:
- propanoyl-CoA C-acyltransferase
- Probable fatty oxidation protein FadB
- Biotin-dependent 3-methylcrotonyl-coenzyme A carboxylase beta1 subunit
- Acyl-CoA dehydrogenase FadE7
- Enoyl-CoA hydratase EchA2
- Probable enoyl-CoA hydratase EchA16
- Probable enoyl-CoA hydratase EchA18
- Probable enoyl-CoA hydratase EchA8
- Probable enoyl-CoA hydratase EchA17
- Probable enoyl-CoA hydratase EchA3
Sequence:
MLLNPNHLTRKYPDRRSGEIMAATVDFFESRGKARLKHDDHERIWYSDFLDFVGRERIFASLLTPASYGADDCRWDTYRISEFAEIMGFYGLSYWYPFQVTALGLGPIWMSANEDAKRKAAAGLEAGEVFAFGLSEQTHGADVYQTDMILTPSDGGWTANGEKYYIGNANVARMVSTFGKIAGTPESQEYVFFVADSQHERYDLIKNVVNSQNYVANYALRDYPVTEADILHRGAEAFHAALNTVNVCKYNLGWGAIGMCTHALYESVTHAANRHLYGTVVTDFSHVRRLLTDAYVRLIAMKLVASRASDYMRSASAADRRYLLYSPLTKAKVTSEGERVITALWDVIAAKGVEKDTFFETVAREIGLLPRLEGTVHINIGLLGKFMPNYLFAPDSTLPVIPRRDDAADDAFLFAQGPTGGLGKVRFHDWRASFDTCAHLPNVALLREQVDVFAELLASATPDAAQQKDIDFAFGVGQLFANVPYAQLILEEARLSGVDEALIDEIFGVLVRDFNTHAVELHGRSATTAEQARFAMRMVRRPVHDPARYDQIWKDHVLALNGAYQMAP
Protein: Os01g0865600 protein (cDNA clone:J013129B18, full insert sequence) (Q5N9E6)
Organism: Oryza sativa subsp. japonica (Rice)
Interaction partners:
Sequence:
MAGAAPLRDSLRRLCTDVGWSYAVFWRATRAADSQRLKLVWGDGHYERAAGAPSISGFEAMDLLLKEKAAALRSGTGRGGGGGEGHAADGAAGHSHDRVDALVHKAMAQQVHVVGEGVIGQAALTGLHRWIVHDIVDECEEEDEVLLEMKGQFCAGIQTIAVIPVLPRGVIQLGSTKMVMEEAAFIDHVRSLFQQLGSSTAVVPCGSFVQDSIMRTPFHKSLGVPTSSHSEDLAGGGNTYNDDMINHQFRHQKSPASTIQSFNPVQQFYAGPTFCRPVTIASRCDLFQPDHGSTFTLNSQSEDNRSTALLKNSVSHSKTSNDAFSHAFNPLNEPNVSISGRRECVSIEQHGSCRNGEMEITIGRTASSSCTGKTNIINKVDDLLSQDCLVGCQASNATSVNRKFQTMSIVDNTKLQDGSYAIPHAALVDSTQYSDCFQSLLGTIQGSSSSNSNAIHVDTSHNAVHGKSNFCPLGDRNAANSSDLAELLASPIPLELTGGNDLFDVLQLQQKPNGSNNSEVNNRQSMPYGSEQAVKSLIGCVDDDFTGLITEADPDQLLDAIVSKIITGHKQNVDTSASCSTTVAGFDRPLHSDCHLYTTGPSSGPIFCNFASVAPVAIKTEGPAAGSRQSSSSIDKSAGCSQTQESYKSQIRLWVENNHSVGSDSLSTGQASDSLSTGQCKRSDEIGKSNRKRSRPGESARPRPKDRQMIQDRIKELREIVPNSAKCSIDTLLEKTIKHMLFLQNVAKHADKLKGSGEPKIVSHEEGLLLKDNFEGGATWAFEVGTRSMTCPIIVEDLNPPRQMLVEMLCKERGIFLEIADQIRGLGLTILKGVMEVRKDKIWARFAVEANKDVTRMEIFLSLVHLLEPSTGSSILSAGVENTSLPRDSFFPSSIPASGFSNCL
Protein: Kinase with adenine nucleotide alpha hydrolases-like domain-containing protein (Q9LIC9)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Interaction partners:
- non-specific serine/threonine protein kinase
- At2g45350/F14N22.7
- At3g13230
- Uncharacterized aarF domain-containing protein kinase At1g71810, chloroplastic
- Zinc finger
- Uncharacterized protein
- Phosphoglycerate mutase family protein
- Glycine-rich protein
- Protein KINASE OF THE OUTER CHLOROPLAST MEMBRANE 1
- Beta-glucosidase 17
Sequence:
MSRLQKRGKQEKPVVSDGAQKVIVAVKASREIPKTALIWALTHVVQPGDCITLIVVVPSHNSGRKLWGFTKSFPMFAGDCASGHRKSHSEALPEIKSDLTDTCSQMILQLHDVYDPNKINVKIKIVSGSPCGAVAAESKKAQANWVVMDKHLKQEEKRCMDELQCNIVVMKRSQAKVLRLNLVGSPKKDAGKECPLPSGPEAASEKHSKNTKGLLDADRGLPVTPTSSPELGTPFTSTEAGTSSVSSSDLGTSPFFTLGMNGYMKKDGALVIKENDGLDDSGSETESENQSLASTSMRFQPWISEYIGTHRHSSQEAEESLLWKNDDRAQISTTKALLEKFSKLDVEVGLSSSRRMDLEFSGNVRDAISLSRSAPPGPPPLCSICQHKAPVFGKPPRLFTYAELELATGGFSQANFLAEGGYGSVHRGVLPEGQVVAVKQHKLASSQGDVEFCSEVEVLSCAQHRNVVMLIGFCIEDSRRLLVYEYICNGSLDSHLYGRQKETLEWPARQKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILITHDNEPLVGDFGLARWQPDGEMGVDTRVIGTFGYLAPEYAQSGQITEKADVYSFGVVLVELVTGRKAIDITRPKGQQCLTEWARPLLEEYAIDELIDPRLGNRFVESEVICMLHAASLCIRRDPHLRPRMSQVLRILEGDMIMDGNYASTPGSEAGNRSGRFWADHYSGQLTNDGSDRFSERLSVETPRLALRERERSQRFELNHNKQY