wanglab/gogpt-training-data huggingface dataset:
Protein: Probable indole-3-pyruvate monooxygenase YUCCA1 (EC 1.14.13.168) (Flavin-containing monooxygenase YUCCA1) (Q9SZY8)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Involved in auxin biosynthesis, but not in the tryptamine or the CYP79B2/B3 branches. Catalyzes in vitro the N-oxidation of tryptamine to form N-hydroxyl tryptamine. Involved during embryogenesis and seedling development. Required for the formation of floral organs and vascular tissues. Belongs to the set of redundant YUCCA genes probably responsible for auxin biosynthesis in shoots.
Interaction partners:
- L-tryptophan--pyruvate aminotransferase 1
- Tryptophan aminotransferase-related protein 2
- Aromatic aminotransferase ISS1
- Tryptophan aminotransferase-related protein 1
- Amidase 1
- Indole-3-acetaldehyde oxidase
- Auxin transporter protein 1
- Nitrilase 1
- Nitrilase 2
- Nitrilase 3
Sequence:
MESHPHNKTDQTQHIILVHGPIIIGAGPSGLATSACLSSRGVPSLILERSDSIASLWKSKTYDRLRLHLPKHFCRLPLLDFPEYYPKYPSKNEFLAYLESYASHFRIAPRFNKNVQNAAYDSSSGFWRVKTHDNTEYLSKWLIVATGENADPYFPEIPGRKKFSGGKIVHASEYKSGEEFRRQKVLVVGCGNSGMEISLDLVRHNASPHLVVRNTVHVLPREILGVSTFGVGMTLLKCLPLRLVDKFLLLMANLSFGNTDRLGLRRPKTGPLELKNVTGKSPVLDVGAMSLIRSGMIQIMEGVKEITKKGAKFMDGQEKDFDSIIFATGYKSNVPTWLQGGDFFTDDGMPKTPFPNGWRGGKGLYTVGFTRRGLLGTASDAVKIAGEIGDQWRDEIKGSTRNMCSSRFVFTSKS
Protein: Putative L-lactate dehydrogenase (EC 1.1.-.-) (P9WND5)
Organism: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Interaction partners:
- Conserved protein
- Pyruvate kinase
- Pre-mycofactocin synthase
- 2-oxoglutarate oxidoreductase subunit KorA
- Putative malate oxidoreductase
- Pyruvate carboxylase
- Putative acetolactate synthase large subunit IlvB2
- Pyruvate dehydrogenase E1 component
- 2-oxoglutarate oxidoreductase subunit KorB
- 3-methyl-2-oxobutanoate dehydrogenase subunit alpha
Sequence:
MAVNRRVPRVRDLAPLLQFNRPQFDTSKRRLGAALTIQDLRRIAKRRTPRAAFDYADGGAEDELSIARARQGFRDIEFHPTILRDVTTVCAGWNVLGQPTVLPFGIAPTGFTRLMHTEGEIAGARAAAAAGIPFSLSTLATCAIEDLVIAVPQGRKWFQLYMWRDRDRSMALVRRVAAAGFDTMLVTVDVPVAGARLRDVRNGMSIPPALTLRTVLDAMGHPRWWFDLLTTEPLAFASLDRWPGTVGEYLNTVFDPSLTFDDLAWIKSQWPGKLVVKGIQTLDDARAVVDRGVDGIVLSNHGGRQLDRAPVPFHLLPHVARELGKHTEILVDTGIMSGADIVAAIALGARCTLIGRAYLYGLMAGGEAGVNRAIEILQTGVIRTMRLLGVTCLEELSPRHVTQLRRLGPIGAPT
Protein: RRM domain-containing protein (Q3UMT8)
Organism: Mus musculus (Mouse)
Subcellular location: Cytoplasm {ECO:0000256|ARBA:ARBA00004496}.
Interaction partners:
Sequence:
MANQVNGNAVQLKEEEEPMDTSSVTHTEHYKTLIEAGLPQKVAERLDEIFQTGLVAYVDLDERAIDALREFNEEGALSVLQQFKESDLSHVQNKSAFLCGVMKTYRQREKQGSKVQESTKGPDEAKIKALLERTGYTLDVTTGQRKYGGPPPDSVYSGVQPGIGTEVFVGKIPRDLYEDELVPLFEKAGPIWDLRLMMDPLSGQNRGYAFITFCGKEAAQEAVKLCDSYEIRPGKHLGVCISVANNRLFVGSIPKNKTKENILEEFSKVTEGLVDVILYHQPDDKRKNRGFCFLEYEDHKSAAQARRRLMSGKVKVWGNVVTVEWADPVEEPDPEVMAKVKVLFVRNLATTVTEEILEKSFSEFGKLERVKKLKDYAFVHFEDRGAAVKAMDEMNGKEIEGEEIEIVLAKPPDKKRKERQAARQASRSTAYEDYYYHPPPRMPPPMRGRGRGGRGGYGYPPDYYGYEDYYDDYYGYDYHDYRGGYEDPYYGYDDGYAVRGRGGGRGGRGAPPPPRGRGAPPPRGRAGYSQRGAPLGPPRGSRGGRGGPAQQQRGRGSRGARGNRGGNVGGKRKADGYNQPDSKRRQTNNQQNWGSQPIAQQPLQQGGDYSGNYGYNNDNQEFYQDTYGQQWK
Protein: Glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADT subunit A) (EC 6.3.5.7) (Q97SE6)
Organism: Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)
Function: Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln).
Interaction partners:
Sequence:
MTFNNKTIEELHNLLVSKEISATELTQATLENIKSREEALNSFVTIAEEQALVQAKAIDEAGIDADNVLSGIPLAVKDNISTDGILTTAASKMLYNYEPIFDATAVANAKTKGMIVVGKTNMDEFAMGGSGETSHYGATKNAWNHSKVPGGSSSGSAAAVASGQVRLSLGSDTGGSIRQPAAFNGIVGLKPTYGTVSRFGLIAFGSSLDQIGPFAPTVKENALLLNAIASEDAKDSTSAPVRIADFTSKIGQDIKGMKIALPKEYLGEGIDPEVKETILNAAKHFEKLGAIVEEVSLPHSKYGVAVYYIIASSEASSNLQRFDGIRYGYRAEDATNLDEIYVNSRSQGFGEEVKRRIMLGTFSLSSGYYDAYYKKAGQVRTLIIQDFEKVFADYDLILGPTAPSVAYDLDSLNHDPVAMYLADLLTIPVNLAGLPGISIPAGFSQGLPVGLQLIGPKYSEETIYQAAAAFEATTDYHKQQPVIFGGDN
Protein: 5,6-dihydroxyindole-2-carboxylic acid oxidase (Tyrosinase-related protein 1) (F1QEC9)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Subcellular location: Melanosome membrane {ECO:0000256|ARBA:ARBA00004573}; Single-pass type I membrane protein {ECO:0000256|ARBA:ARBA00004573}.
Interaction partners:
- Melanocyte-inducing transcription factor b
- Melanocyte-stimulating hormone receptor
- Melanocyte inducing transcription factor a isoform 1
- Dopachrome tautomerase.
- 5,6-dihydroxyindole-2-carboxylic acid oxidase
- Agouti-signaling protein
- Premelanosome protein a.
- Oculocutaneous albinism II.
- Sodium/potassium/calcium exchanger 5
- Premelanosome protein b.
Sequence:
MFGLYGAVLLLVHALVLVRTQFPRVCVTAEGLRSAQCCPSPNGLGDDPCGASLGRGQCVDVSADTRAHGPQYPYTGRDDRESWPRRFFTRACRCNGNYSGFDCGRCKHAHTGEECQQRVPVVRRNVLTLSAEQKRVFVSALDQAKRTTHPDIVIATRHYSEIFGPDNSTQFQNISIYNLFVWTHYYSVSKTFLGDGEPSFSAVDFSHEGPGFLTWHRYHLLQLERDMQDMLRDPSFALPFWDFSTGGSECDICTDDLMGARSRFDSTAISSNSIFSSWRVICESVEDYDTLGTICNSTESSPIRRNPAGNVARPMVQRLPEAQDVAACLEIDAFDTPPFYSTSSDSFRNSIEGYSAPEGPYDPVVRSLHNLAHLFLNGTGGQTHLSPNDPIFLLLHTFTDAIFDEWLRRHTADVSSYPLENAPIGHNREFNMVPFWPPVRNAEMFVSAADSLGYSYEVQWPARALTLTQIITVTVVAALIIVAIVFAAATCVVRSRSFGTETRQPLLGDQYQRYDEQHKTQSVV
Protein: L-arabinitol 4-dehydrogenase (LAD) (EC 1.1.1.12) (Q763T4)
Organism: Aspergillus oryzae (Yellow koji mold)
Function: Catalyzes the NAD-dependent oxidation of L-arabinitol to L-xylulose in the fungal L-arabinose catabolic pathway. L-arabinose catabolism is important for using plant material as a carbon source. Also active on ribitol and xylitol. Not active with NADP as cosubstrate.
Interaction partners:
Sequence:
MATATVLEKANIGVYTNTNHDLWVAESKPTLEEVKSGESLKPGEVTVQVRSTGICGSDVHFWHAGCIGPMIVTGDHILGHESAGEVIAVASDVTHLKPGDRVAVEPNIPCHACEPCLTGRYNGCEKVLFLSTPPVDGLLRRYVNHPAVWCHKIGDMSYEDGALLEPLSVSLAAIERSGLRLGDPVLVTGAGPIGLITLLSARAAGATPIVITDIDEGRLAFAKSLVPDVITYKVQTNLSAEDNAAGIIDAFNDGQGSAPDALKPKLALECTGVESSVASAIWSVKFGGKVFVIGVGKNEMKIPFMRLSTQEIDLQYQYRYCNTWPRAIRLVRNGVISLKKLVTHRFLLEDALKAFETAADPKTGAIKVQIMSNEEDVKGASA
Protein: Mitochondrial import inner membrane translocase subunit (F4IKQ3)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Subcellular location: Mitochondrion inner membrane {ECO:0000256|RuleBase:RU367043}; Peripheral membrane protein {ECO:0000256|RuleBase:RU367043}; Intermembrane side {ECO:0000256|RuleBase:RU367043}.
Interaction partners:
Sequence:
MASPIPVGVTKEQAFSMAQTEMEYRVELFNNDIYKLEEYKFETADMSKILRLPELLAQTCFNKCVDKRYKEAELNMGENSCIDRCVSKYWQVNGMVGQLLSAGKPPV
Protein: Serine/threonine-protein kinase ppk24, mitochondrial (EC 2.7.11.1) (Meiotically up-regulated gene 29 protein) (O94647)
Organism: Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Function: Has a role late in meiosis.
Subcellular location: Mitochondrion {ECO:0000269|PubMed:16823372}.
Interaction partners:
- Uncharacterized hemerythrin-like protein C869.06c
- Probable E3 ubiquitin-protein ligase mug30
- TMEM14 protein homolog P14E8.05c
- Cytochrome c oxidase polypeptide 5, mitochondrial
Sequence:
MTNYPFFRQGTIFVDNSAIQRNSENKNSLSIENIFGRFPKEFFQFFSINVSKSTTKKSSVVIKPSTITAPWLENEYLDSNTSLLSVHSIQPSFIGMSDFAIGLDPSLKRILPEIRFRLDFQHLKSIAKGATSTIKVVTHRDKITDAKIYYAAKVYRKTKTSHKKRLNTMVYFLREWSIQPKLDHPNILKVICPCVTLTSVFNKSAGFCLVQEYCPQGDLFKQIEEKVLTLEDKCCYLKQILQAVAYLQSQRIAHRDLKPENILIGRDGLLKLTDFGTSEIVGNPGDNESIRFVSGAVGSLAYLAPEAFHENEYCGLLADRWSCGILLKVLFTGYFPFKTSVKTDLYYSKYMSILTDTCGISSTDESSFQTEVIKQIPTLQPLRYIPEGAKKIILSLLNPDSQNRPSLDSILGTAWVRKLDCCSNFSTDHENKSLQEVDFDASKPITRKSLIPRIHNHQTLV
Protein: RING-type domain-containing protein (A0A178WAA1)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Interaction partners:
Sequence:
MLSGNNGNTAPPVFMNENQLQYQTNLRSNQLHLLGNMGGGCTVDPVNYFANDNLVPMIRPNKRGREAESISNNIQRQQQKLQMSLNYNYNNTSVREEVPKENLVSTGLRLSYDDDEHNSSVTSASGSILAASPIFQSLDDSLRIDLHRQKDEFDQFIKIQAAQMAKGVRDMKQRHIASFLTTLEKGVSKKLQEKDHEINDMNKKNKELVERIKQVAMEAQNWHYRAKYNESVVNVLKANLQQAMSHNNSVIAAADQGKEGFGDSEIDDAASSYIDPNNNNNNNMGIHQRMRCKMCNVKEVSVLIVPCRHLSLCKECDVFTKICPVCKSLKSSCVQVFFS
Protein: D-glyceraldehyde dehydrogenase (NADP(+)) (GADH) (Glyceraldehyde DH) (EC 1.2.1.89) (Q6L285)
Organism: Picrophilus torridus (strain ATCC 700027 / DSM 9790 / JCM 10055 / NBRC 100828 / KAW 2/3)
Function: NADP-dependent dehydrogenase of the nED (non-phosphorylated Entner-Doudoroff) pathway with highest activity towards glyceraldehydes (e.g. D,L-glyceraldehyde and D-glyceraldehyde), to a lesser extent towards D,L-glyceraldehyde-3-phosphate and glycolaldehyde, but no activity towards aliphatic or aromatic aldehydes.
Interaction partners:
- 2-dehydro-3-deoxy-D-gluconate/2-dehydro-3-deoxy-phosphogluconate aldolase
- 2-keto-3-deoxy gluconate aldolase
- Glycerate 2-kinase
Sequence:
MKIYIDGEWRDSSSGETIKKYNPSTGEVLDTFPAATRNDVDAAIDSAEDAFKRWSDMTSMERSKILYKALELISKDKDQLTDLLIKENGKVKREAMDETEGVIDQLQYYTEFERKLTGDIVEGTSNKRKIFQYKVPYGIVIAITPWNFPAAMVIRKLAPALLTGNTVILKPSSDTPLTAEWLVKKFVDAGIPKGVLNLITGKGSEIGDYIVEHKKVSLITMTGSTSTGQRIMEKASKNMAKLILELGGKAPFMVWKDANIERALKSLVWAKYLNVGQSCIAAERLYIHEDIYDEFMKKFIEVSKRIKLGDPESSDMGPLINKSAVETTEKYVDIARSSGYKILLGGKKPELSGKYKNGYFYEPTIIENVPQDSPLFQEEIFGPVIGAESVSSVDELYEKANDSKYGLASYLFTEDPELIFEASEKIRFGELYVNMPGPEASQGYHTGFRLTGQAGEGSKYGISEYLKLKNVYVDYSRGNLSISTVNDDLFKNL
Protein: Projectin (O76280)
Organism: Drosophila melanogaster (Fruit fly)
Interaction partners:
Sequence:
QKVESFLSPLIDQFAKEGKDKKVVFEARFSKPNCKPKWLFRKDEVFTGSKFKFKQENDTYQLIITTPKVEDTGKYTIEIGGVSSTAFLNVEEADPTYTFTKPLKKKLEGFTQHETTLECSVSSSMANVHWFKNNTKLESDDPRYLISKDINGNLKLIIKDSVLDDAGLYRCQLDKQPDKTECNLKVTEYPYKFVKVLKSQQCIEKDTVTLACEIDDAMGEVQWLRNGEEIKPDKRIQIVKDGRKRKLVIKDCKVTDAGQFKCTTNADTTESEIIINYQNRFNKKLKDTEAVEREKLILDIELQDQTAPCDWKFNGEPIVPSGSIEIKNMGGGKHQLIFSSLDMSNEGEITFESGQLSSKCKLSIRKGESRPNIDCPDKFSGPISAPVLLEVPFKVSGTKQTPVEAKLFKDGKPLPVKDVEVAVTDDKVTFKIKKPSRDLSGPYQIKISNGQGEDTKDVQIICQDVPQPPQDVDITDVYQTSCVVSFNPPSDDGGTPITKYVIERQDLSKKHGWESVAEVLPSEPCLKKIDDLIPKKQYRFRIRAVNAIGQSDPATFKNTILAKDPWDEPGKPRQSILPTGIKTMQI
Protein: DNA-directed RNA polymerase (EC 2.7.7.6) (Q57UI1)
Organism: Trypanosoma brucei brucei (strain 927/4 GUTat10.1)
Subcellular location: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
Interaction partners:
- DNA-directed RNA polymerases I, II, and III subunit RPABC5
- DNA-directed RNA polymerases I, II, and III subunit RPABC3
- DNA-directed RNA polymerase subunit beta
- Nitroreductase, putative
- Plastid-encoded RNA polymerase subunit alpha
- DNA-dependent RNA polymerases, putative
- DNA-directed RNA polymerase subunit, putative
- DNA-directed RNA polymerases II subunit, putative
- DNA-directed RNA polymerase II, putative
- Probable DNA-directed RNA polymerases I, II, and III subunit RPABC2
Sequence:
MSLITDFPFHAYLGDLKTRRVMGAKDAVSLSLLASEDMSGIAFVEVRTRAGQEDRSAPWRPVVRNGENHATFYDTRMGNFDANPFPPQTCQTCAASLTGKYGNERCHGHFGFVGMPRIRPGSAHSDSDRLVVLNPHLAMDADRLFRAKCFFCHKFRAPTFDVERFRQALVLADHGLPGDALHLLDTVPTAKGHDAMLNHRRMANEEIVNDVSILQSYVDRILRQRASGCSEEDAKARVTMAQKGTVDVRNDICNMAISHLRSFSGPCSHCTAISPTFLKRGGIIFFLFRKSNLVTNIAKGFLTQQEVSEWEAVNRLHGRTGTYFDGRQMLFHMKNLFAKEQAILGLLYPNLGEPSVFTKTNKVVPASERYKLFFLDRILVPPLPLRLSSGVRVNDNGLIIPDEQTRALSDILGFVEQIECFHTLSANSTNGRSFITDAQRAVNESNLRNLQQKVDEFYAEIINSFAKKEGLFRMNMMGKRVNQACRSVISPDPFVEPNEVLLPRPLARALSFPEQVTCFAPARMNLLKHCVVNGPRKYPGATHIELRHANGEIRSVDLNVPEQTRRQHAARFFAMAQSGVTLIVYRHILNGDRVIFNRQPTLHKPSMMGYRVKVLSGSKTIRFHYVNGNSFNADFDGDEMNVHVPQSIETRAEVETLMDANINYLVPTSGRPIRGLIQDHVAAGVLVTLRDKFFDHSTFVQLVYNGVGPYIQENVGITLAELIPIPAILMPRPMWTGKQLISVMVRFSSGLSAASDCGREIEGGITLKGTSQIQPSAFDRIPAGSCDAVRVKSGAVVDSTVMFANSELITGFMCKKQLGASNMSAPHHVYELYGPHRTGQLFAAFGRVLLLALRKEGLSLAMDDMFLVDEERRCDLLRKLDDIALDVPDEEATAAPMIADYATKIQQEFVPQRMLVPFPKNHLLLMTISGAKGSNLNATQMSLQLGQQLFDGLRVKRMNSSKTLPSFFTNEKRARSFGFAMGSFASGIRPAEYTIHAMAGRDGLIDTAVKTSRSGHLQRCLIKGLESLVVHWDRTVRDSNGSVIQFMYGGDGLDPCKASTLTAWEMMKDNVVDVSKRFGGDASESVAGAEDGAAAGLEEMRNEDGKPTTEAVQNAHMEQQLSTYPLPASLDKSLSEYLCKKADFPLFRKVSTLARWDAKQQLKERLQQRRQKWVGAFEKTLADITARRRLWALCEPGEPVGLLAAQAAGEPSTQMTLNTFHTAGSTVSHVTEGIPRLRELLIYASVNKAAVVVPVTNATEEDEKVIAKMLRAGVAAKLTDCLAKVTDGAGGQSASSSMQRNLNTGFGKGYHYHVARGRTGMVITVSFLFSRSCLEELRKRMCMSPSEHRQSFTEALKNVVRLIMRSLSAVPREKESGDGSGNTGGMKGGSGRADRKRKRSGPDDGGGPLGGTFGDEIMRIEEGTDSDDGMSERSSIGGGRAGSEVSSLHSDGTDTRGIAGSDTGGPQRRRGSVESGRGDDASDSEAADPDLYARRSGSPARDAEDGDEMQDRDGTDWGGTSMQGVVGYDNFPEIHMSFTKSNFGAVIAPLSTAAAARDGVVQLHEDFFIVNAVLRTPSDVIAVIPDVVDNALEAQRMPSWLPQFGSLTFTRLKDKGSGQLVFQGPGSTMRNVMSFLSLFTVGIKSIKLHQACSTDIRDMGTYFGIESGYAALYDELNKLFNRYNVDPRHLSLIADTSTHRGRWENFNFTGVISTSASPLFQMTFASSKRWLHRAVSRGMSDDLESFSSAIMVGERPRVGTASVRLSTDTAILRDVLERNFA
Protein: Cytoplasmic phosphatidylinositol transfer protein 1 (Mammalian rdgB homolog beta) (M-rdgB beta) (MrdgBbeta) (Retinal degeneration B homolog beta) (RdgBbeta) (Q9UKF7)
Organism: Homo sapiens (Human)
Function: Catalyzes the transfer of phosphatidylinositol (PI) and phosphatidic acid (PA) between membranes. Binds PA derived from the phospholipase D signaling pathway and among the cellular PA species, preferably binds to the C16:0/16:1 and C16:1/18:1 PA species.
Subcellular location: Cytoplasm {ECO:0000269|PubMed:10531358}.
Interaction partners:
- Membrane-associated phosphatidylinositol transfer protein 3
- Ras-related protein Rab-1B
- Type-1 angiotensin II receptor-associated protein
Sequence:
MLLKEYRICMPLTVDEYKIGQLYMISKHSHEQSDRGEGVEVVQNEPFEDPHHGNGQFTEKRVYLNSKLPSWARAVVPKIFYVTEKAWNYYPYTITEYTCSFLPKFSIHIETKYEDNKGSNDTIFDNEAKDVEREVCFIDIACDEIPERYYKESEDPKHFKSEKTGRGQLREGWRDSHQPIMCSYKLVTVKFEVWGLQTRVEQFVHKVVRDILLIGHRQAFAWVDEWYDMTMDEVREFERATQEATNKKIGIFPPAISISSIPLLPSSVRSAPSSAPSTPLSTDAPEFLSVPKDRPRKKSAPETLTLPDPEKKATLNLPGMHSSDKPCRPKSE
Protein: Collapsin response mediator protein-3B (Q9DDZ6)
Organism: Gallus gallus (Chicken)
Interaction partners:
Sequence:
MSNPGKRSGPRGTSEQLLIKGGKIVNDDQSFYADIYVEDGLIKQIGENLAVPSGVRTVDAYGQLVVPGGIDVHTRLQMAVMGMASADDFYQGTRAALAGGTTMIMDHVLPEAGTSLLAAYEQWRQRADSRACCDYALHIDIPRWHESLREELEALVKDKGVNSFLVFMAYKDRLQCTDAQMYEIFCIIRDLGAIAQVHAENGDIIEEEQKRLLDIGITGPEGHVLSRPEEVEAEAVYRAITIAKQANCPLYVTKIMSKSAADVVAQAKRKGTVVYGEPITASLGADGSHYWSKNWAKAAAFVTSPPLSPDPTTPERLSSLLSCGDLQVAGSAHCTFTTAQKAVGKDNFTLIPEGTNGIEERMAIIWEKCVVSGKMDENDFVAVTSTNAAKIFNCYPRKGRIAVGSDADLVLWNPRATKVISAKTHNLNVEYNIFEGTECHGAPAVVISQGKVVLEDGNLFVTEGSGRFVPRKTFPDFVYKRIKARNRLAEVHGVPRGLYDGPVHDVVLSTKAVPTIAASRIAACAGKVPAVPVRNLHQSGFSLSGSQADDHVARRTAQKIMAPPGGRSNITSLS
Protein: La ribonucleoprotein 6, translational regulator a (La-related protein 6a) (Zgc:66107) (Q6PHD4)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Subcellular location: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
Interaction partners:
- La ribonucleoprotein 4Aa
- RNA-binding protein 44
- Protein mab-21-like 3
- TM2 domain-containing protein 3
- La ribonucleoprotein 4B
- La ribonucleoprotein 4Ab.
- Si:dkey-205h23.2
- Serine-threonine kinase receptor-associated protein
Sequence:
MSSEQPPREISAPVTITVAIQAAEEDDEPDEEPSCNTIELQTGSGSEDELGRHDKSSGAGTSGGELEEESWQPPDPELIQKLVAQIEYYLSDENLEHDAFLLKHVRRNKLGFVSVKLLTSFKKVKHLTRDWRTTAYALRHSNLLELNDEGRKVRRRSTVPVFASESLPSRMLLLSELKRWPELGIALGGDSNNGSGPTQQERLMELLLKAFGNYGPIASVRVLKPGKDLPADLKKLSGRYSQLGTEECAIVEFEEVEAAMKAHEAVGGEGGNRGPLGLKVVLIGTKPPKKKVPKDRPRDEGIGGMRKSRSLNSRVRELQYHGDDSAASSSETESNPTSPRLARKSRSCNKLSPTSAGPNHLSPVVSPRSSPWSSPRASPCTQRKTHPSGKSPLASEGRLSPEPGRRWADYSSDSSLTPSGSPWVQRRKQVASQESSPVGSPMLARKIQNADGLPPGVVRLPRGPDGTRGFHCPPLGKTASTQTCL
Protein: Glutamate receptor (E9PD61)
Organism: Homo sapiens (Human)
Subcellular location: Cell membrane {ECO:0000256|ARBA:ARBA00004651}; Multi-pass membrane protein {ECO:0000256|ARBA:ARBA00004651}. Postsynaptic cell membrane {ECO:0000256|RuleBase:RU367118}; Multi-pass membrane protein {ECO:0000256|RuleBase:RU367118}.
Interaction partners:
Sequence:
MEHGTLLAQPGLWTRDTSWALLYFLCYILPQTAPQVLRIGGIFETVENEPVNVEELAFKFAVTSINRNRTLMPNTTLTYDIQRINLFDSFEASRRACDQLALGVAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPSVDNKDLFYINLYPDYAAISRAILDLVLYYNWKTVTVVYEDSTGLIRLQELIKAPSRYNIKIKIRQLPSGNKDAKPLLKEMKKGKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTTLDLFALDLELYRYSGVNMTGFRLLNIDNPHVSSIIEKWSMERLQAPPRPETGLLDGMMTTEAALMYDAVYMVAIASHRASQLTVSSLQCHRHKPWRLGPRFMNLIKEARWDGLTGHITFNKTNGLRKDFDLDIISLKEEGTEKAAGEVSKHLYKVWKKIGIWNSNSGLNMTDSNKDKSSNITDSLANRTLIVTTILEEPYVMYRKSDKPLYGNDRFEGYCLDLLKELSNILGFIYDVKLVPDGKYGAQNDKGEWNGMVKELIDHRADLAVAPLTITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDGSTMTFFKKSKISTYEKMWAFMSSRQQTALVRNSDEGIQRVLTTDYALLMESTSIEYVTQRNCNLTQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQEEGKLHMMKEKWWRGNGCPEEDNKEASALGVENIGGIFIVLAAGLVLSVFVAIGEFIYKSRKNNDIEQCLSFNAIMEELGISLKNQKKIKKKSRTKGKSSFTSILTCHQRRTQRKETVA
Protein: Dehydrogenase/reductase 2 (C9JZP6)
Organism: Homo sapiens (Human)
Interaction partners:
Sequence:
MLSAVARGYQGWFHPCARLSVRMSSTGIDRKGVLANRVAVVTGSTSGIGFAIARRLARDGAHVVISSRKQQNVDRAMAKLQGEGLSVAGIVCHVGKAEDREQLVAKALEHCGGVDFLVCSAGVNPLVGSTLGTSEQIWDKILSVNVKSPALLLSQLLPYMENRRGAVILVSSIAAYNPVVALGVYNVSKTALLGLTRTLALELAPKDIRVNCVVPGIIKTDFSKV
Protein: Cytoplasmic FMR1-interacting protein (Specifically Rac1-associated protein 1) (Q9VF87)
Organism: Drosophila melanogaster (Fruit fly)
Function: Plays a role in guidance and morphology of central and peripheral axons and in synaptic morphology. Also required for formation of cell membrane protrusions and for bristle development. Plays a role in regulating mitochondrial activity, energy metabolism and membrane potential which maintains normal gamma-aminobutyric acid (GABA) signaling and ensures normal social behavior.
Subcellular location: Cytoplasm {ECO:0000269|PubMed:12818175}. Note=Accumulates in central axons and motor neuron terminals. {ECO:0000269|PubMed:12818175}.
Interaction partners:
- Abelson interacting protein, isoform D
- Membrane-associated protein Hem
- FI14118p
- Wiskott-Aldrich syndrome protein family member
- Fragile X messenger ribonucleoprotein 1 homolog
- LD21576p
- eIF-4F 25 kDa subunit
- eIF-4F 25 kDa subunit
- eIF-4F 25 kDa subunit
- eIF-4F 25 kDa subunit
Sequence:
MTEKITLADALSNVEVLDELSLPDEQPCIEAQPCSIIYKANFDTNFEDRNGFVTGIAKYIEEATTHANLNVLLDEGQKHAVMLYTWRCCSRAIPQPKSNEQPNRVEIYEKTVEVLAPEVNKLLNFMYFQRKAIEAFSGEVKRLCHAEKRKDFVSEAYLLTLGKFINMFAVLDELKNMKSSVKNDYSTYRRAAQFLKVMSDSHTLQESQNLSMFLATQNKIRDTVKDTLEKIVGYEDLLSDVVNICVHMFETKMYLTPEEKHMLVKVMGFGLFLMDSDACNINKLDQKKKIRLDRIDRIFKNLEVVPLFGDMQIAPFNYIKRSKHFDSSKWPLSSSNAISPQADLMVHLPQIREDHVKYISELARYTNEVTTTVKENPSDAENRITADLALRGLQLLSEWTSVVTELYSWKLLHPTDHHQNKECPVEAEEYERATRYNYTSEEKFALIEVIAMIKGLQVLMARIETVLCEAIRRNIYSELQDFVQLSLREPLRKAVKNKKDLIRSIIMSVRETSADWQKGYEPTDDPVAKGKKDPDGGFRIQVPRLNVGPSSTQLYMVRTMLESLIADKSGGKRTLRKDIDGNCLLQIDTFHKTSFYWSYLLNFSDTLQKCCDLSQLWYREFYLEMTMGRKVNKCLVRHQHNEECKDLITMEKRIQFPIEMSMPWILTDHILQTKEPSMMEFVLYPLDLYNDSAYYALTVFRKQFLYDEVEAEVNLCFDQFVYKLSEQIFAHYKQLAGSIFLDKRFRLECEVLGFNFQSYPRNNRYETLLKQRHVQLLGRSIDLNKLITQRINANMHKSIELAISRFEGNDITGIVELEGLLEANRICHKLLSKYLALDNFDGMVKEANHNVLAPYGRITLHVFVELNYDFLVNYCYNAATNRFIRTKVNLSSSQAIQREKPPQMSHYYLWGSKQLNAAYSTQYGQYTGFVGSPHFHAMCRLLGYQGIAVVMDIILKDIVKPLIQGSLLQFTKTLMIAMPKSCKLPRCEYGSPGVLSYYQAHLTDIVQYPDAKTELFQSFREFGNSIIFCLLIEQALSQEEVCDLLHAALFQNIFPRPFCKENEKPEAKQKRLEAQFANLQIVSNVEKIGTAKQAMIAREGDLLTRERLCCGLSIFEVILNRVKSYLDDPVWCGPPPANGIIHVDECSEFHRLWSALQFVYCIPVRGTEYTIEELFGEGLNWAGCVMIVLLGQQRRFEALDFCYHILRVQRVDGKDEDVKGIQLKRMVDRIRRFQVLNSQIFSILNKYLKGGDGEGSNVEHVRCFPPPQHPSVISSSSHYQDPQKLRQSINN
Protein: RNA polymerase-binding transcription factor DksA (Repressor PtrB) (TraR/DksA C4-type zinc finger protein) (Q9R2Q7)
Organism: Pseudomonas aeruginosa
Interaction partners:
Sequence:
MADLADHANELVLARLDGLLAARPALAIRESAEDCEDCGEPIPQARRRAAPGCSRCIDCQDRHERR
Protein: Ras-related protein Rab-2B (Q559X6)
Organism: Dictyostelium discoideum (Social amoeba)
Interaction partners:
- Uncharacterized protein
- Rac guanine nucleotide exchange factor B
Sequence:
MCNCGSSGEKPTFNDRKSTSYEHLFKYIMVGDSAVGKSNLLLQFVDKRFAPNSDFTIGVEFGSRSININDKQIKLQIWDTAGQEKFRSITRAYYRGAVCAMIVYDITRRDSFESLNSWLTDCRKFSSCDVTTVLIGNKADLEANRQVSTSEAKEFAEKNGLMFFETSAKTALNVDEAFEKSTEQILKKLESNPGLLSNEGNN
Protein: mRNA (guanine-N(7))-methyltransferase (EC 2.1.1.56) (Q57V03)
Organism: Trypanosoma brucei brucei (strain 927/4 GUTat10.1)
Interaction partners:
- Nuclear cap-binding protein subunit 2
- Chaperone protein DNAJ, putative
- HECT-type E3 ubiquitin transferase
- Transcription initiation protein, putative
- RNA guanylyltransferase
Sequence:
MESTSSLSDLHKYAERRFGRSLLIPVDEEFVKAVHPPVPSEASEVAPAVDFVEAYRNLVSRNLQRKRTANNAPTSPASSGVPKFIYAHAAEAVVGTRVGEFMGPLCSPLRKSHASMLRSAPYFVTEKSDGTRVVLVSLIAPLGPSWSIEDKNGGDVLLKHVGRLDDVVALEEARQQLCQENTAQVGDLHQKIHLSFGHFAVERWHEKSSYGTVELFALRCCENGSSSSQGGGDVIRAERLIGKRHMAYCFDRSMDYAYLLLEEHAVPSLHSFVVDAELMVPIQKGSARLLLGCFDVFRYVIVGESAPRDVVLTRAHTSARHAALRKDIIEPMEEFQRGTVGVPLLRIFAKEMFPLNKFGDCVLRLRCGESANHIGGVVYLYDGPYGWTKSDGFIFTPEKFDILQGASKTQLKWKWPSMLSVDWSLTAFEGQNNFFVVDSFFRKKRFGHQPDSCGHVRLSSKMSLLNPFSLPIPTRGSVVAECVFDREQKCWSIERLRNDKAEANSIVTIISVMESLVEDITLSTLFDLIGLNDTPLPSEKVHELESAADMVNRGGERGNTAAIQDVEEKHEKKRCQFTLRATQLQAQGEHEIHLYWAVRLPSEKAHVPCIHCKVSECTGFGFACPAEDPTSRLREYLYIALANAGGSCAWSDFTVEAVFNGGTGRWNIASMQPNGDNKRSTCVGVIHHLQWLLQRGVDSASPESTETPERVIPLHLQGVERPAVLQVEQVNAHYACKTKELSTGKNRSILRHYNNWIKGVLISTSVSYLRSNNKGGEFDNDGMVVADLCSGRGGDLHKWRAHQPKLLFMTDCCLEAVAEAAARYSITKGLSIKVVPHDKNPPGIRAQFCVLDVFDEKGSLVTKLEEFLKQCHDGGKLDVVSCQFSIHYGCSNEERVRVFLSAVSSTLKSGGIFIGTTVSDTELLRRLRQYGTTFGNGIYTVRFPTDAVPNDSFGVEYSVSFESSVSEMPEYLVPWNRFVNLCGAYNLQLVESFGFVEYGDMHYNSALGQELRDASMNGGRRDSDGHLRLRLSPDEAEAAGLFRTFLFVKI
Protein: Ubiquitin carboxyl-terminal hydrolase 17-like protein 24 (EC 3.4.19.12) (Deubiquitinating enzyme 17) (Ubiquitin thioesterase 17) (Ubiquitin-specific-processing protease 17) (Q0WX57)
Organism: Homo sapiens (Human)
Function: Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes that may include cell proliferation, progression through the cell cycle, apoptosis, cell migration, and the cellular response to viral infection.
Subcellular location: Nucleus, nucleolus {ECO:0000269|PubMed:17109758}. Endoplasmic reticulum {ECO:0000250}.
Interaction partners:
- CAAX prenyl protease 2
- Ubiquitin carboxyl-terminal hydrolase 17
- Sin3 histone deacetylase corepressor complex component SDS3
Sequence:
MEDDSLYLRGEWQFNHFSKLTSSRPDAAFAEIQRTSLPEKSPLSCETRVDLCDDLAPVARQLAPREKLPLSSRRPAAVGAGLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQTCHRHKGCMLCTMQAHITRALHNPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVQQALEQLVKPEELNGENAYHCGVCLQRAPASKTLTLHTSAKVLILVLKRFSDVTGNKIAKNVQYPECLDMQPYMSQPNTGPLVYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFYIQKSEWERHSESVSRGREPRALGAEDTDRRATQGELKRDHPCLQAPELDEHLVERATQESTLDHWKFLQEQNKTKPEFNVRKVEGTLPPDVLVIHQSKYKCGMKNHHPEQQSSLLNLSSSTPTHQESMNTGTLASLRGRARRSKGKNKHSKRALLVCQ
Protein: RAB13, member RAS oncogene family (A0A087WWB9)
Organism: Homo sapiens (Human)
Subcellular location: Membrane {ECO:0000256|ARBA:ARBA00004635}; Lipid-anchor {ECO:0000256|ARBA:ARBA00004635}.
Interaction partners:
Sequence:
MGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKSGGRRSGNGNKPPSTDLKTCDKKNTNKCSLG
Protein: SH3 domain-containing protein 3 (AtSH3P3) (Q8L7W0)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: May be involved in the recruitment of DRP2A to the accessory protein complex and in the negative regulation of its GTPase activity.
Subcellular location: Cytoplasmic vesicle, clathrin-coated vesicle {ECO:0000269|PubMed:11701884, ECO:0000269|PubMed:12207647}.
Interaction partners:
- Phragmoplastin DRP1A
- Dynamin-2A
- Protein FREE1
- Protein RADIALIS-like 3
- Dynamin-related protein 3B
- Dynamin
Sequence:
MDAFRRQASKLRDQVAKQQLAVIKQFSGTGYESSDVMVIDELEMQRHHQLDKLYRSTRSAKEFQRDIVKAAEAFTTIGLRHIEAGTKLSEDCCRYGNENSQNIDENILAKAAAIYGDARKHVDKEQEDFNKLLASQVLDPLRAMVAGSPLEDARHLAQRYSRMRQEAETHATEVSRRQARVREAPIPENVAKLQLAEAKMQELKANMAVLGKEATAALAAVESQQHRLTFQRLVAMVEGEKNYHLRIAAILSDIEAEMVTEKQHKESAPPAIPTENGSEKTSYFLAEVIHPFSAASEKELDLDKGDYIVVRKVSQTGWAEGECKGKAGWFPMAYIEKRQRLPTTNFAAEVY
Protein: Homeobox protein Hox-A13b (Hox-A13) (P79724)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Function: Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis.
Subcellular location: Nucleus {ECO:0000255|PROSITE-ProRule:PRU00108}.
Interaction partners:
Sequence:
MTASLLLHSRWIDPVMFLYDNGLDDMSKNMEGFVGGNFAANQCRNLIAHPSTLAPSTTYTSSEVPVSGMGEPVKQCSPCSAVQNTPSASLPYGYFGGSYYPCRMPKSCTQPTTYGEKYMDTSVSGEEFPSRAKEFAFYQGYSSGPYQPVPSYLDVPVVPALSAPSEPRHESLLPVETYQPWAITNGWSSPVYCPKDQTQSSTLWKSSIQDTVSGTDGASVRRGRKKRVPYTKVQLKELEREYATNKFITKDKRRRISAHTNLTERQVTIWFQNRRVKEKKVVNKYKGIS