wanglab/gogpt-training-data huggingface dataset:
Protein: Ras-related protein RABD1 (AtRABD1) (Ras-related protein ATFP8) (Q9ZRE2)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Protein transport. Regulator of membrane traffic from the Golgi apparatus towards the endoplasmic reticulum (ER).
Subcellular location: Golgi apparatus, trans-Golgi network membrane {ECO:0000269|PubMed:19789181}. Golgi apparatus membrane {ECO:0000305|PubMed:19789181}; Lipid-anchor {ECO:0000305|PubMed:19789181}.
Interaction partners:
- Trafficking protein particle complex subunit
- At5g58750
- Myosin-6
- Putative RRM-containing protein family protein)
- Trafficking protein particle complex II-specific subunit 120 homolog
- Syntaxin-32
- Membrin-12
- Trafficking protein particle complex subunit
- Trafficking protein particle complex subunit
- Tetratricopeptide repeat
Sequence:
MSNEYDYLFKLLLIGDSSVGKSCLLLRFADDAYIDSYISTIGVDFKIRTIEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDCTEMESFNNVKQWLSEIDRYANESVCKLLIGNKNDMVESKVVSTETGRALADELGIPFLETSAKDSINVEQAFLTIAGEIKKKMGSQTNANKTSGPGTVQMKGQPIQQNNGGCCGQ
Protein: GPI transamidase component Tta1 (Q381L0)
Organism: Trypanosoma brucei brucei (strain 927/4 GUTat10.1)
Interaction partners:
- GPI transamidase component GAA1
Sequence:
MRSSGDLANSAERKLDDEKKRCDWRFTDNTPLIAACLLTGAVVLGVHYISICKDRTDISLPTLMESIESKCRSLGDAFNASAPESVLHPVPTQIGVAIWVAREEWSLPVHDTLDRIEKVVSGAGNRKQQFIQRIVRVSQLGSDGNLEKSSSSSTKWSGSGKVSQDPLANAAIKQQLGLSVAKHAYAVSLKEELLMHTISFFAAPPSAAKSVRCFLFDDKRAYCTVPTEMGMETTKREVEAAVATLLADWLEIENFRDANATQRWAMMRKVRGCHYALRALRQLKMSVDAHPEMPVPEGVRGAVDRLEKLVHESDFTKLARAAADLQFHQLLLPQIYIPWDQAVVNHLSILMPVYGVITLAVRLIKENRKRAQVVQNS
Protein: Klarsicht, isoform F (M9PBH0)
Organism: Drosophila melanogaster (Fruit fly)
Subcellular location: Nucleus membrane {ECO:0000256|ARBA:ARBA00004126}.
Interaction partners:
Sequence:
MPQSSNSNISSSNSLLQQRNHNIGNKMLPNKAHGKNIAVAVITPNSHGNTSHGHGLGHGLGHELNKSPLGLRKTRHHHNDTSKFNRSNRKSKNCAIFYFKHLDTDNEQGNAAGSDLQSEDDPSLIHRRRAGGDILKSADASTDDDDEGWLYTATAAATLEVATAATAAPTAAAATSSVDGLQSTAVSSTTATGGPLPPSDDSDKENKVALVSATTITAAATATATSIATLHSSNYDSSSACSSSNSNSNSNSNSNGRLTETSATSRVTQLQMQIHSQSQSQSQMELQINGNAIDGRHIISNNNCYSSMQHQPQNNNEGEAAEDLAKIKMGDDEAAADMANGNATKSQQMSNGVYSRADSCNFTVWAAETVASCHLPPRSPAKSAKSSKSQASNATVSGSTLVSPVKGKVSHDSIKQLVLEAEHLVRDAQETALKTPTKQKHSIIKISSTVKKREVTMPHPIKQRVEEWLEHQPSTPQLLTRSHTHELLPSCKPDDCEASGEASETDSVPQAGAGVNGGAPNGAGSDTSEGFTDSIATCMQTSTNSYGNSTERIGGSAEPIGQPVTPLGFGSSNQSLNVKIVKRSQTRRKSERPWSVSCLSQLTTDAAQLTTARIVENSPSGLASHSISESALDSLSPGPRPRAASSSGTGSNAAKKADSKGSLRRRKARKKRISAASAGRKSDSGSELGGDLTQTLMKSCESMSSQQLQEFTNALLSIQKGAVVAPLSPKGDVSGVPSLADGEGGETQLMLPKFRVGSFTTAGLLATDTRLGALAALSNYMNEDEQQAELSTEDHHSSISETAWDNYQEKYNSENYSEGFDSDAARRLLEFGDDYRNFIDSQSDCCSSLSAANNLDSFSPPRMDSLQKHELKTLHINQDTITSTVDHARRQRALELQYERRRKTLEVRRKSCQDMDESLMASPQSDQQQQQLQVTPSLSASATALMTTPKIQSTSHQISHRAESVGRKLDFGGMSHSAQSLLRRTSESDTSTRRRRTVTADERRRSSRNLEKCIKLIPATTSSSSGSDSEDGEQEMRSLLQQSRDRLDDTRALKIRCHLLRPEDYNEIINTCRDNIRCLEAVLRGPPGTVLSNHCAGQTKDLLGAWEDLLSWSENASAARKLQQEMSVLKSSLQRLGDKPTPELLDTEPAIQIAVEALKLEQTQLTSYRTNMLRLNASVHSWLTKQERRLQSALEEQEQQQESEQLKQQKLVEEEKGADVQKELASTGAVAITVTDSNGNQVEALATGEASTSTPAWDVHTLMSSEQEFHKHLKNEVSDMYSSWDEADARINTQLEMLTNSLIAWRQLESGLSEFQLALGQDRGTLKGLEGALDKGQATPVELAQNVKLVAKLLSEKVHVSQEQLLAVQQHLDPNHIYHITKFTASNGSLSDSGISDGGATSDGGLSERERRLGVLRRLAKQLELALAPGSEAMRSIAARMESAEADLKHLQNTCRDLIVRTAASHQQKQQIQQNQTQQVSPKANGHIKKQAAKGKAEPQSPGRRGKGARKARQAKKAGEDQQVEEPSLSPEQQKMVLKQLKTLTSGDGGDDPSDDPSLLFNLESSEEDGEGADPAQTSKRGWAWRIARAAVPMQVALFTIFCAACLMQPNCCDNLNNLSMSFTPQLRYIRGPPPI
Protein: Flotillin-like protein 4 (D2XNR1)
Organism: Medicago truncatula (Barrel medic) (Medicago tribuloides)
Function: May act as a scaffolding protein within caveolar membranes, functionally participating in formation of caveolae or caveolae-like vesicles (By similarity). Required for normal infection threads initiation and elongation and nodulation. Probably involved in polar growth of the infection thread.
Subcellular location: Membrane, caveola {ECO:0000250}. Cell membrane {ECO:0000269|PubMed:20018678}. Note=In puncta evenly distributed in the cell membrane of root hair and epidermal cells. Accumulates in the tips of elongating root hairs and localizes to the infection thread membranes upon inoculation with bacteria.
Interaction partners:
Sequence:
MYKVAKASQYLVITGIGIKDIKLAKKAWILPGQSYSVFDLSPVNYTFEVQAMSAEKLPFVLPAVFTIGPRVDDKESLLKYAKLISPHDKLSNHVKELVQGIIEGETRVLAASMTMEEVFRGTKEFKQEVFGKVQLELNQFGLLIYNANVKQLVDVPGHEYFSYLGQKTQMEAANQARVDVSEAKMKGEIGSKLREGQTLQNAAKIDAETKIIAMQRAGEGDKEGIKVRTEVKVFENQREAEVAEANSELAKKKAAWTKAAQVAEVEAAKAVALRDAELQGEVERMNALTTTEKLKAEFLSKASVQYETKVQEANWELYKKQKEAEAILYEKKAEAEAQKALADATFYARTQAAEAELYAKKKEAEGIVTLGNAQGVYLSALLNALGNNYTAVRDFLMINGGMFQEIAKINAEAVRGLEPKISIWTNGGDNSGGEGAMKEVAGVYKMLPPLFKTVHEQTGMLPPAWMGVLPDKNLN
Protein: Protein FAM117B (Amyotrophic lateral sclerosis 2 chromosomal region candidate gene 13 protein) (Q6P1L5)
Organism: Homo sapiens (Human)
Interaction partners:
- Dual specificity tyrosine-phosphorylation-regulated kinase 1A
- DDB1- and CUL4-associated factor 7
Sequence:
MSQRVRRNGSPTPAGSLGGGAVATAGGPGSRLQPMRATVPFQLKQQQQQQHGSPTRSGGGGGGNNNGGCCGGASGPAGGGGGGGPRTASRSTSPTRGGGNAAARTSPTVATQTGASATSTRGTSPTRSAAPGARGSPPRPPPPPPLLGTVSSPSSSPTHLWTGEVSAAPPPARVRHRRRSPEQSRSSPEKRSPSAPVCKAGDKTRQPSSSPSSIIRRTSSLDTLAAPYLAGHWPRDSHGQAAPCMRDKATQTESAWAEEYSEKKKGSHKRSASWGSTDQLKEIAKLRQQLQRSKHSSRHHRDKERQSPFHGNHAAINQCQAPVPKSALIPVIPITKSTGSRFRNSVEGLNQEIEIIIKETGEKEEQLIPQDIPDGHRAPPPLVQRSSSTRSIDTQTPGGADRGSNNSSRSQSVSPTSFLTISNEGSEESPCSADDLLVDPRDKENGNNSPLPKYATSPKPNNSYMFKREPPEGCERVKVFEECSPKQLHEIPAFYCPDKNKVNFIPKSGSAFCLVSILKPLLPTPDLTLKGSGHSLTVTTGMTTTLLQPIAVASLSTNTEQDRVSRGTSTVMPSASLLPPPEPIEEAEG
Protein: Alpha-amylase (EC 3.2.1.1) (A0A8I5ZU41)
Organism: Rattus norvegicus (Rat)
Interaction partners:
Sequence:
MTLPLHFSLQRHLTREYCQHHSRMKFFLLLSLIGLCWAQYDPHTFYGRSSIVHLFEWRWVDIAKECERYLAPNGFGGVQVSPPNENIVVNSPFRPWWERYQPISYKICSRSGNEDEFRDMVNRCNNVGVRIYVDAVINHMCGVGAEAGQSSTCGSYFNPNNRDFPGVPYSGFDFNDGKCKTGSGGIENYNDAAQVRDCRLSGLLDLALEKDYVRTKVADYMNHLIDIGVAGFRLDASKHMWPGDIKAVLDKLHNLNTKWFSEGSKPFIYQEVIDLGGEAVSSNEYFGNGRVTEFKYGAKLGKVLRKWDGEKMAYLKNWGEGWGFMPSDRALVFVDNHDNQRGHGAGGSSILTFWDARLYKMAVGFMLAHPYGFTRVMSSFHWPRYFENGKDVNDWVGPPNNNGATKEVTINSDSTCGNDWVCEHRWRQIRNMVAFRNVVNGQPFANWWDNGSNQVAFGRGNKGFIVFNNDDWDLSTTLQTGLPAGTYCDVISGDKVDGNCTGIKVYVGSDGNAYFSISNSAEDPFIAIHVESKI
Protein: Large ribosomal subunit protein mL43 (Q583E5)
Organism: Trypanosoma brucei brucei (strain 927/4 GUTat10.1)
Subcellular location: Mitochondrion {ECO:0000256|ARBA:ARBA00004173}.
Interaction partners:
- 60S ribosomal protein L17, putative
- 50S ribosomal protein L2, putative
- 40S ribosomal protein S13, putative
- Small ribosomal subunit protein uS5
- Large ribosomal subunit protein mL46
- 50S ribosomal protein L13, putative
- Ribosomal protein L11, putative
- Large ribosomal subunit protein uL15/eL18 domain-containing protein
- Large ribosomal subunit protein bL21m
- Large ribosomal subunit protein uL29m
Sequence:
MSRNGELCLKKVIISYCPSNGAPNTRQFLATHLPHFHAKYPSVSIDLRPRLWPEMAITGVYRDGSERSYNTKNLSPMGIFLRLNNLVSTANDYDQPFCASHLHFQRRSVQGTWNPWLWNYETERRRTEAPQWRRKLSEKEWDYYVGQYSAQMKQEEDEIQRRVADRTCVQEQSTREVQERWKRHVVPRMQTDLEFNLSHFKRQHARGQLQQRPVTMGEYRLFSVPDPRELGQDAVDTMRRRESHNMEVWWRKRKEQLKPP
Protein: FimA (Q83UM2)
Organism: Escherichia coli
Subcellular location: Fimbrium {ECO:0000256|ARBA:ARBA00004561}.
Interaction partners:
Sequence:
MKIKTLAIVVLSALSLSSTAALAAATTVNGGTVHFKGEVVNAACAVDAGSVDQTVQLGQVRTASLAQEGATSSAVGFNIQLNDCDTNVASKAAVAFLGTAIDAGHTNVLALQSSAAGSATNVGVQILDRTGAALALDGATFSSETTLNNGTNTIPFQARYFATGAATSGAANADATFKVQYQ
Protein: Glucose-6-phosphate 1-dehydrogenase (G6PD) (EC 1.1.1.49) (Q557D2)
Organism: Dictyostelium discoideum (Social amoeba)
Function: Cytosolic glucose-6-phosphate dehydrogenase that catalyzes the first and rate-limiting step of the oxidative branch within the pentose phosphate pathway/shunt, an alternative route to glycolysis for the dissimilation of carbohydrates and a major source of reducing power and metabolic intermediates for fatty acid and nucleic acid biosynthetic processes.
Subcellular location: Cytoplasm, cytosol {ECO:0000250|UniProtKB:P11413}.
Interaction partners:
- Probable 6-phosphogluconolactonase
- Glucose-6-phosphate isomerase
- 6-phosphogluconate dehydrogenase, decarboxylating
- Phosphoglucomutase-1
- RRM domain-containing protein
- Triosephosphate isomerase
- Glyceraldehyde-3-phosphate dehydrogenase
- Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial
- Probable phosphoglucomutase-2
- Pyruvate kinase
Sequence:
MTSTPDSRSVLTVIILGASGDLAKKKTYPALFGLYLRDLLPSNTIIYGYARSHIEIGDFKARISKGLKGDEEKKKQFLNLLHYHSGKYDEKASYDEFEKLILAEEKKQQGVDKFNRLFYMAIPPSIFIEVSIGIHGSLISKNGWSRVIVEKPFGRDLASSRELVSELGKLFKEKDLFRIDHYLGKEMVQNLMVLRFANAVFEPLWSKSHISSITITFKEDIGTEGRGGYFDQFGIIRDVMQNHLLQVLSLVAMEPPVSLNADDITNEKVKLLRCIQPIKMSEVVLGQYTSDPEGKIPAYLDDEGVPKDSTTPTYAAAVFHINNPRWRGMPFILKCGKALDERKTEVRIQFKRPDNFLFSDDDISRNELVMRIQPGEAVYLKLLSKKPGLENKIEQTELDLSYRHRFENLDLPDAYERLILDSIKGDHNLFVRDDELDVAWQIFTPLLDQIEKEKIKPEPYSFGSRGPKSADELSKKFGFIRSLGYNWPGNSPQGSKK
Protein: 3-methyl-D-ornithine--L-lysine ligase (EC 6.3.2.59) ((3R)-3-methyl-D-ornithine:L-lysine ligase) (Pyrrolysine biosynthesis protein PylC) (Q8TUC0)
Organism: Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A)
Function: Is required for the biosynthesis of pyrrolysine. Catalyzes the ATP-dependent ligation between (3R)-3-methyl-D-ornithine and L-lysine, leading to (3R)-3-methyl-D-ornithyl-N6-L-lysine.
Interaction partners:
- Pyrrolysine synthase
- 3-methylornithine synthase
- Pyrrolysine--tRNA ligase
- Carbamoyl phosphate synthase small chain
- Diaminopimelate decarboxylase
- Monomethylamine methyltransferase MtmB1
- Trimethylamine methyltransferase MttB1
- Trimethylamine methyltransferase MttB2
- Orotidine 5'-phosphate decarboxylase
- Orotate phosphoribosyltransferase
Sequence:
MKTICLIGGKLQGFEAAYLSKKADMKVVVIDKNPQALIRNYADEFHCFDVIKEPEKLLEISKNVDAILPVNENLECIKFLSSVKEEFSCPVLFDFEAYRISRDKKKSKEYFRSIGIPTPQDKPGRPPYFVKPPCESSSVGARIIYDEEELGELEPGMLVEEYVEGEVISLEVIGDGTHFAVVKETLIHIDRTYDCHMVTPLPSDLSFREISYSLAANLPLKGIMDVEAISGPQGLKVIEIDSRFPSQTPTAVYYSSGVNLIELLFRAFGEGVEEVKTLPEDRYCIYEHLMLAENGALIPVGEQVLSMGNDYGKYYEEPGIEIFLCRGEDPVFTLVFWGKDREEAENKKRTGLLILKDRFGAAV
Protein: Low affinity inorganic phosphate transporter 2 (PhPT2) (PhPht1;2) (Arbuscular mycorrhiza-induced phosphate transporter PT2) (AM-induced phosphate transporter PT2) (H(+)/Pi cotransporter PT2) (B2CPI4)
Organism: Petunia hybrida (Petunia)
Function: Low-affinity transporter for external inorganic phosphate (Pi).
Subcellular location: Cell membrane {ECO:0000250|UniProtKB:Q8GSG4}; Multi-pass membrane protein {ECO:0000255}.
Interaction partners:
Sequence:
TARYTALVAKDAKRAAADMGKVLHVEIDPEDAKVERMAKDESNQFGLFSWEFVRRHGLHLFGTCSTWFLLDIAFYSQNLFQKDVFTAIGWIPPAKTMNAVQEVYKIARAQTLIALCSTVPGYWFTVAFIDIIGRFAIQLMGFFFMTVFMFAIAIPYHHWTLQENRIGFVIMYSLTFFFANFGPNATTFV
Protein: Heptaprenyl diphosphate synthase component 1 (HepPP synthase subunit 1) (EC 2.5.1.30) (P55784)
Organism: Geobacillus stearothermophilus (Bacillus stearothermophilus)
Function: Supplies heptaprenyl diphosphate, the precursor for the side chain of the isoprenoid quinone menaquinone-7 (MQ-7).
Interaction partners:
Sequence:
MLDGASTAPSEAERCIIAMMLMQIALDTHDEVTDDGGDLRARQLVVLAGDLYSGLYYELLARSGETALIRSFAEAVRDINEQKVRLYEKKVERIESLFAAVGTIESALLVKLADRMAAPQWGQFAYSYLLMRRLLLEQEAFIRTGASVLFEQMAQIAFPRAKTLTKEQKRHLLRFCRRYIDGCREALFAAKLPVNGLLQLRVAELSGGFQAIAKKTVEEG
Protein: Proteasome regulatory ATPase subunit 6 (Q9NC95)
Organism: Trypanosoma brucei
Interaction partners:
Sequence:
MATKMVTPTATASDTDNPVSTYFLQKIQELRAQEKRLQDNYMRLEAQRNELNRRVRHLKEEVQLLQESGSIVADVVRVMSKGKVLVNVSSSQGKLVVDVEKTVNIDDLSRNVRVALRSGTFAIHYILPTKVDPLVSLMKVENAGSESTYDEIGGLSRQVKEIKEVIELSVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGAELVQKYIGEGARLVRELFVMAREHSPSIIFMDEIDSIGSTRLENTGRGGDSEVQRTMLELLNQLDGFESTQSIKVIMATNRVDILDEALLRPGRIDRKIEFSAPDEPARFEILKINSRKMNLTRGINLRTVAEKTNQCSGAAYKAVCTEAGMFALRERRVHITQEDFELAVAKIMHKDQDKSVSLKKMWK
Protein: Leucine-rich repeat protein (LRRP) (Q380Z8)
Organism: Trypanosoma brucei brucei (strain 927/4 GUTat10.1)
Interaction partners:
Sequence:
MLFEPSGDLRVDYSAFCHTLRTTEREEVYRSLITNTQQKAERETKHSLSPEDEAILLQWEEPNRMQTLQQEPLPEVEKAKENPTSKRHGTGAKREGATPSRKKSEHNDTSPSNPQPPPPPTVFYILMRHLKFCLNERDMKPLALAIPYCTSLVSVEFVGCGLSRESYFLLVEASYKSRRLVSMTVDFNCAPKPGFYEDPTIAIAPVEVPKVRELFPTEKNVPSVRFDDRKRAPSRDLTSLHTESVVTSIRADGQSSGGAASEALPTFSPSAYRGLNNVPSLLDLQIREERERKGKTDSKKQAQLQQQRETLAQFDRENRIPVPPGWPAALLTGVKHLSLRGNGISDRDAILTASLLSAHPRSELISLNLWGNNISDDGAVALARLLKKNRTLQVLDLGHNDIGDRGLAALVDCFRIQEMPAEELPAYRKRHLSRYNATAKEKSMISSLPPPYPSYQELYNTWHLCRYPTPVEDRRESKKGLQAKARKAEPAPARPTAPFDRDCFRLDDPPRVRAPGNTVLRCLNLGNNKRLTYEGAVEALRVLSLHEPIDDADMAMLRHCAVKPPEPYCVSISLSSFVVHHAGDNRLLDVQNDLSKLLQYRLERLRQLPVDDAAPVEDVKKRSPRGKK
Protein: Glutathione S-transferase D6 (EC 2.5.1.18) (Q9VG94)
Organism: Drosophila melanogaster (Fruit fly)
Function: Conjugation of reduced glutathione to a wide number of exogenous and endogenous hydrophobic electrophiles. May be involved in detoxification.
Interaction partners:
- Glutathione S-transferase D4
- Bifunctional glutamate/proline--tRNA ligase
- Glutathione S transferase O3
- Glutathione S-transferase S1
- Glutathione S transferase D10, isoform A
- Glutathione S-transferase D2
- Glutathione S transferase E7
- Glutathione S transferase T1
- Glutathione S transferase T2
- FI01423p
Sequence:
MDLYNMSGSPSTRAVMMTAKAVGVEFNSIQVNTFVGEQLEPWFVKINPQHTIPTLVDNLFVIWETRAIVVYLVEQYGKDDSLYPKDPQKQALINQRLYFDMGTLYDGIAKYFFPLLRTGKPGTQENLEKLNAAFDLLNNFLDGQDYVAGNQLSVADIVILATVSTTEMVDFDLKKFPNVDRWYKNAQKVTPGWDENLARIQSAKKFLAENLIEKL
Protein: DM10 (Disease resistance protein (TIR-NBS-LRR class) family) (Disease resistance protein-like) (Q9FGT2)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Interaction partners:
- Glucan endo-1,3-beta-glucosidase 6
- Protein REPRESSOR OF SILENCING 3
- Putative disease resistance protein At1g59780
Sequence:
MASSSSSSRSRTWRYRVFTNFHGPDVRKTFLSHLRKQFSYNGISMFNDQSIERSQTIVPALTGAIKESRISIVVLSKNYASSRWCLDELLEILKCREDIGQIVMTVFYGVDPSDVRKQTGEFGIAFNKTCEGKTNEETQKWSKALNDVGNIAGEHFFNWDNEAKMIEKIARDVSNKLNATISWDFEDMVGIEAHLQKMQSLLHLDYEDGAMIVGIYGPAGIGKTTIARALHSRLSSSFQLTCFMENIRGSYNSGLDEYGLKLRLQEQLLSKVLNHDGIRINHLGAIPERLCDQKVLIILDDVDDLQQLEALANETNWFGPGSRIIVTTEDQELLEQHDVNKKYHVDFPTREEACKIFCTYAFRRSFAPYGFEKLAERVTWLCSNLPLGLRVMGSTLRGKKEDDWEGILRRLENSLDRKIDGVLRVGYDHLCEDDQFLYLLIAFFFNYVDDDHVKAMLVEDNLDVKLGLKTLAYKSLIQISAEGNIVMHKLLQRVGREAIQRQEPTKRRILIDAREICDVLRYGKGTSNVSGISFDTSDMSEVTISDDAFKRLHDLRFLKVTKSRYDGKYRMHIPAGIEFPCLLRLLHWEAYPSKCLPPTFNPEFLVELNMQGSQLEHLWSGTQSLRNLKNMDLGWSPNLKELPDLTNATNLEDLNLNSCESLVEIPSSFSHLHKLKNLWMSYCINLQVIPAHMNLVSLERVTMTGCSRFRKIPVISTHINYLDIAHNTEFEVVHASIALWCRLHYLNMSYNENFMGLTHLPMSLTQLILRYSDIERIPDCIKALHQLFSLDLTGCRRLASLPELPGSLLDLEAEDCESLETVFSPLHTPRALLNFTNCFKLGGQARRAIIRRRSEIIGKALLPGREVPAEFDHRAKGNSLTIILNGYRPSYDFIQYLVCVVISPNQEITKISDSSTLLCHTNGYIFPSYEEVYIGAVSKCRKEHLFIFRSGYYLNVDPSGASREIVFEFSSKSQDFDIIECGVKIWTAQSIERGYLVFEDDNEIKHDDHTNRVRGHYKASNVDYKSVSRKRPRKTDLKLEIPRRRF
Protein: HTH-type transcriptional activator TtdR (P45463)
Organism: Escherichia coli (strain K12)
Function: Positive regulator required for L-tartrate-dependent anaerobic growth on glycerol. Induces expression of the ttdA-ttdB-ygjE operon.
Interaction partners:
- L
- L-tartrate/succinate antiporter
- L
- HTH-type transcriptional regulator XapR
- Hca operon transcriptional activator HcaR
- Uncharacterized HTH-type transcriptional regulator YdcI
- Uncharacterized HTH-type transcriptional regulator YnfL
- HTH-type transcriptional regulator HdfR
Sequence:
MLNSWPLAKDLQVLVEIVHSGSFSAAAATLGQTPAFVTKRIQILENTLATTLLNRSARGVALTESGQRCYEHALEILTQYQRLVDDVTQIKTRPEGMIRIGCSFGFGRSHIAPAITELMRNYPELQVHFELFDRQIDLVQDNIDLDIRINDEIPDYYIAHLLTKNKRILCAAPEYLQKYPQPQSLQELSRHDCLVTKERDMTHGIWELGNGQEKKSVKVSGHLSSNSGEIVLQWALEGKGIMLRSEWDVLPFLESGKLVQVLPEYAQSANIWAVYREPLYRSMKLRVCVEFLAAWCQQRLGKPDEGYQVM
Protein: Vitronectin (D9ZGG2)
Organism: Homo sapiens (Human)
Subcellular location: Secreted {ECO:0000256|ARBA:ARBA00004613}.
Interaction partners:
Sequence:
MAPLRPLLILALLAWVALADQESCKGRCTEGFNVDKKCQCDELCSYYQSCCTDYTAECKPQVTRGDVFTMPEDEYTVYDDGEEKNNATVHEQVGGPSLTSDLQAQSKGNPEQTPVLKPEEEAPAPEVGASKPEGIDSRPETLHPGRPQPPAEEELCSGKPFDAFTDLKNGSLFAFRGQYCYELDEKAVRPGYPKLIRDVWGIEGPIDAAFTRINCQGKTYLFKGSQYWRFEDGVLDPDYPRNISDGFDGIPDNVDAALALPAHSYSGRERVYFFKGKQYWEYQFQHQPSQEECEGSSLSAVFEHFAMMQRDSWEDIFELLFWGRTSAGTRQPQFISRDWHGVPGQVDAAMAGRIYISGMAPRPSLAKKQRFRHRNRKGYRSQRGHSRGRNQNSRRPSRATWLSLFSSEESNLGANNYDDYRMDWLVPATCEPIQSVFFFSGDKYYRVNLRTRRVDTVDPPYPRSIAQYWLGCPAPGHL
Protein: Interleukin 32 (Interleukin-32 theta) (C6GKH1)
Organism: Homo sapiens (Human)
Interaction partners:
Sequence:
MCFPKVLSDDMKKLKARMHQAIERFYDKMQNAESGRGQVMSSLAELEELTPLLEKERDGLRCRGNRSPVPDVEDPATEEPGESFCDKVMRWFQAMLQRLQTWWHGVLAWVKEKVVALVHAVQALWKQFQSFCCSLSELFMSSFQSYGAPRGDKEELTPQKCSEPQSSK
Protein: Homeobox protein pv.1 (Posterior-ventral 1 transcription factor) (O42173)
Organism: Xenopus laevis (African clawed frog)
Function: Transcriptional repressor. Acts in a ventral signaling pathway downstream of bmp4, which suppresses dorsal mesoderm formation and leads to both ventral mesoderm and ventral ectoderm formation. Acts in the ectoderm to simultaneously specify epidermal lineages and restrict neuralization. Represses transcription of dorsal-specific genes. Binds to DNA, with preference for the target sequences 5'-TAATGC-3' and 5'-TAATTG-3'. Acts in a pathway downstream of bmp4 and fgf to negatively regulate erythroid specification.
Subcellular location: Nucleus {ECO:0000305}.
Interaction partners:
Sequence:
MVQQGFSIDLILARSREEAADGKDSMSSRPHIPCAPQPLPPNKYAKEMPRRKDGQDVQEHSSWSLGEQGKKLQYSSPSSAALHRSWGSSDDFSSVGSEDDSTEGSPSPMRNSQETETDHRGESPKSDLQRHLRTAFTPQQISKLEQAFNKQRYLGASERKKLATSLRLSEIQVKTWFQNRRMKLKRQIQDQQHNMVPPPVCYPQTFPYYPGVLPVPLNSGSFYQPPAHPFQAPQNSYIPDPRFIPQPLPHHIRMSVALQQQYPPLGLPPGRYFTGLASKNDG
Protein: Ribosome quality control complex subunit 1 (O13796)
Organism: Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Function: Component of the ribosome quality control complex (RQC), a ribosome-associated complex that mediates ubiquitination and extraction of incompletely synthesized nascent chains for proteasomal degradation. Rqc1 is essential for the recruitment of cdc48 to ribosomal subunits.
Subcellular location: Cytoplasm {ECO:0000269|PubMed:16823372}.
Interaction partners:
- Cell division cycle protein 48
- Ribosome quality control complex subunit 2
- E3 ubiquitin-protein ligase listerin
- Ubiquitin fusion degradation protein 1
- Nuclear protein localization protein 4
- tRNA endonuclease vms1
- Protein kri1
- Uncharacterized protein C4.03c
- Vacuolar import and degradation protein 27
- Glutathione-independent glyoxalase DJ-1
Sequence:
MSSRALRKLQRQRQTELLEEALDSESDEDDEFSSTSGKKVVNVFEILEKENNAINSEAEKSVSEEEQDEPLVEGESPIVSTNKKAKNKKKKKKQQKKKKVTGKRDLDNQSSDNEKLEGLESSKNIDDDIDEIEKAAAELKLKYREQDQVEHVAGVEESATIPLDKELDEKLNKLLGVNISMLNPDLEIRKIFGRIVEKRSVNARHDNLRRKRHVLVQPQEGWPPLVRSGLGMKLTGQSQDLECFFEITQSRAYQEVQETFEYYVQTYDPNNLLMLLRSHPFHIDTLLQVSEIIDQQGDHELSAELVARGLYAFDSILHPRFNLATGATRLPFAIPSNRRLFLCIWRYLQSLQSRGCWRTVFEFCKALLQFDMSDPYAIGTCIDIYALRRREFAWIIDFANYLENSNKISDTPNMLYSSALAMFYVHGDTTDTRASMLAAFERAPYMLSELLDTLNISFTKSSIPSPQDPVQELHSAMYALYAKDSWSDPTVLAFINSILEKETVTLHDVEGQFAELTENLSRRVILLNEQSLRKFLPQRILQGTILSFDPLPPDTYLSESQVFGRDISRRIASFLSDYLSRAREVNENEEEPPAHEFDLPPAEQLLQQIESEVGEESEDGTPVMTRLRSFFGSLFTSTNSETEPAEESTEEMGQGD
Protein: AMP deaminase (EC 3.5.4.6) (X2JEY5)
Organism: Drosophila melanogaster (Fruit fly)
Interaction partners:
- Adenylosuccinate lyase
- Adenylosuccinate synthetase
- Adenine phosphoribosyltransferase
- Adenosine kinase
- Adenylate kinase 2
- Inosine-5'-monophosphate dehydrogenase
- Adenosine kinase
- Adenosine kinase
- Adenylate kinase 1
- Dual specificity calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1
Sequence:
MSYRGMLSTSDGSPVELRVQDVDSFDGSMMSHAATNAAGPLGSKASGKSLNACTSMSMPQKPSSLRATCDLADSPVDEKAEADVEVTNEISAPYEVPQFPIEQIEKKLQIQRHLNEKQATGPRPVATAAVLATNRESSSSTEGRESAVTMERNDADINFQRVSISGEDTSGVPLEDLERASTLLIEALRLRSHYMAMSDQSFPSTTARFLKTVKLKDRINNLPVKEVSDVHLRHSPMKITNPWNVEFPNDEDFKIKPLNGVFHIYENDDESSEIKYEYPDMSQFVNDMQVMCNMIADGPLKSFCYRRLCYLSSKYQMHVLLNELRELAAQKAVPHRDFYNTRKVDTHIHAASCMNQKHLLRFIKKTLKNNANEVVTVTNGQQMTLAQVFQSMNLTTYDLTVDMLDVHADRNTFHRFDKFNSKYNPIGESRLREVFLKTDNYLNGKYFAQIIKEVAFDLEESKYQNAELRLSIYGKSPDEWYKLAKWAIDNDVYSSNIRWLIQIPRLFDIFKSNKMMKSFQEILNNIFLPLFEATARPSKHPELHRFLQYVIGFDSVDDESKPENPLFDNDVPRPEEWTYEENPPYAYYIYYMYANMTVLNKFRQSRNMNTFVLRPHCGEAGPVQHLVCGFLMAENISHGLLLRKVPVLQYLYYLTQIGIAMSPLSNNSLFLNYHRNPLPEYLARGLIISLSTDDPLQFHFTKEPLMEEYSIAAQVWKLSSCDMCELARNSVMMSGFPHAIKQQWLGPIYYEDGIMGNDITRTNVPEIRVAYRYETLLDELSNIFKVNQTCSIADMNAT
Protein: NFE2 like bZIP transcription factor 1 (J3QQQ1)
Organism: Homo sapiens (Human)
Subcellular location: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
Interaction partners:
Sequence:
MTRLDRSSHSGGGHAKGSRPLNSLLAGHRVAQPASAPGSRASVQDIDLGAGREVFDYSHRQKEQDVEKELRDGGEQDTWAGEGAEALARNLLVDGETGESFPAQFPADISSITEAVPSESEPPALQNNLLSPLLTGTESPFDLEQQWQDLMSIMEMQAMEV
Protein: Histone H1.5 (Histone H1a) (Histone H1b) (Histone H1s-3) (P16401)
Organism: Homo sapiens (Human)
Function: Histone H1 protein binds to linker DNA between nucleosomes forming the macromolecular structure known as the chromatin fiber. Histones H1 are necessary for the condensation of nucleosome chains into higher-order structured fibers. Acts also as a regulator of individual gene transcription through chromatin remodeling, nucleosome spacing and DNA methylation (By similarity).
Subcellular location: Nucleus {ECO:0000269|PubMed:10997781, ECO:0000269|PubMed:15911621}. Chromosome. Note=Mainly localizes with heterochromatin (PubMed:15911621). Associates with actively transcribed chromatin and not heterochromatin (PubMed:10997781). {ECO:0000269|PubMed:10997781, ECO:0000269|PubMed:15911621}.
Interaction partners:
- Histone H2A type 2-A
- Histone H2A type 2-C
- Homeobox protein MSX-1
- Histone H2B type 2-E
- Histone H1.1
- Cyclin-dependent kinase 2
- Histone H1.3
- Histone H2A type 1
- Testis-specific H1 histone
- Cyclin-dependent kinase 1
Sequence:
MSETAPAETATPAPVEKSPAKKKATKKAAGAGAAKRKATGPPVSELITKAVAASKERNGLSLAALKKALAAGGYDVEKNNSRIKLGLKSLVSKGTLVQTKGTGASGSFKLNKKAASGEAKPKAKKAGAAKAKKPAGATPKKAKKAAGAKKAVKKTPKKAKKPAAAGVKKVAKSPKKAKAAAKPKKATKSPAKPKAVKPKAAKPKAAKPKAAKPKAAKAKKAAAKKK
Protein: Probable dipeptidyl peptidase 3 (EC 3.4.14.4) (Dipeptidyl aminopeptidase III) (Dipeptidyl arylamidase III) (Dipeptidyl peptidase III) (DPP III) (Q08225)
Organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Subcellular location: Cytoplasm {ECO:0000305}.
Interaction partners:
Sequence:
MSHFFADHDAPLSMLSVKTEYFPQLTDKEQKYAHFMSKASHAGSRVVMRQVSHESEPIFDLILAIHSKLNGKYPEDDITQKQQTGLYLEYVSQFLSNLGNFKSFGDTKFIPRCEVKFFKQLLELAKINPCSSPLTLSPVDVNHEFTSHHLFSTINELIDIGIYHVEEKAALLGFPSQGYTSAYYLGLPVTPEDMALLKEQLFAELAILPENTRINKVGENSFQIWVASENVKNQITETYPSGQITLSNAVTKVEFIFGDHSREMRLVASYLKEAQKFAANDTQKAMLQEYINHFVTGSSQAHKEAQKLWVKDISPVIETNIGFIETYREPSGIIGEFESLVAIQNKERTAKFSSLVNNAEEFISLLPWSKDYEKPIFNPPDFTSLEVLTFTGSGIPAGINIPNYDDVRLKIGFKNVSLGNILSAAAKSSSKHPPSFISQEDRPIFEKYQSDSFEVQVGIHELLGHGSGKLLTEFTDGFNFDKENPPLGLDGKPVSTYYKVGETWGSKFGQLAGPFEECRAEVIAMFLLTNKKILDIFGFHDVESQDKVIYAGYLQMARAGLLALEYWNPKTGKWGQPHMQARFSIMKTFMKHSTDKNFLKLEMNSTNDDFAIKLDKSLIKTAGHECVKDYLKHLHVYKCSGDVEQGSKYFIDRSTVTPDLASLRDIVLSKRLPRRQFIQSNSYIDDNNKVTLKEYDETPQGMLQSFLDREL