wanglab/gogpt-training-data huggingface dataset:
Protein: Trypacidin cluster transcription factor (Trypacidin synthesis protein E) (Q4WQZ3)
Organism: Aspergillus fumigatus (strain ATCC MYA-4609 / CBS 101355 / FGSC A1100 / Af293) (Neosartorya fumigata)
Function: Transcription factor that regulates the expression of the gene clusters that mediate the biosynthesis of trypacidin, a metabolite with antiprotozoal activity and a possible role in the infection process. Trypacidin is toxic for human pulmonary and bronchial epithelial cells by initiating the intracellular formation of nitric oxide (NO) and hydrogen peroxide (H(2)O(2)), thus triggering host necrotic cell death.
Subcellular location: Nucleus {ECO:0000255|PROSITE-ProRule:PRU00227}.
Interaction partners:
- NADH-ubiquinone oxidoreductase 304 kDa subunit
- NADH-ubiquinone oxidoreductase 49 kDa subunit, putative
- NADH-ubiquinone oxidoreductase chain 1
- NADH-quinone oxidoreductase, 23 kDa subunit, putative
- NADH dehydrogenase flavoprotein 1, mitochondrial
- NADH-ubiquinone oxidoreductase subunit B, putative
- NADH-ubiquinone oxidoreductase chain 3
- Cytochrome b
- Cytochrome c oxidase subunit 1
- Cytochrome c oxidase subunit 3
Sequence:
MRSPASSRRASALHRLCDSCRACGLSKVRCSKEKPTCSRCRRRGTVCEYVVTKRPGRKPDSRSEVEPEPGHLSHPLPSPESSTAISQGNLPDPDAFDPLFALPEPFDSTPELHSGPLSTVDSSLSSALTTWCPDFDDFFSFPVSTEDTLSGDRGAVYDGTIKHPPNLRRHSESPPAVPDDTIYLFGKPVDPAPPDQSLPATTTIGRRASPPSGRESEAGSRRLSCRCLIRALDLLKHFEVIRREAEIESSLPSIDAVVEVNKQTTEAITGMLQCPCSQKDGYLLVLLALIVCKILDRYAAAAIPGTEQGHDPTRRLDEGPMAGQRVLGELHCIQRVMNQLGPRLRMHGAQGASPGQAFHGTPAPLSVGLGDQLEPELHQRLSRLSSEIIRLLREAQ
Protein: Glucose transporter 2 (Solute carrier family 2, facilitated glucose transporter member 2) (Q102R8)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Subcellular location: Membrane {ECO:0000256|ARBA:ARBA00004141}; Multi-pass membrane protein {ECO:0000256|ARBA:ARBA00004141}.
Interaction partners:
Sequence:
MEKQLTGTLALAVFTAALGSLQMGYSLGVINAPQKVIERHYARSLGVYNEDLARSEGGNGTEHEKPTDPSVVMYWSLSVAIFSVGGMLSSFLVSFVGDFRGRIKGMLAINVLAITAGLLMGLAKMGTPHLMVIAGRAIMGLYCGLSSGLVPLYIGEISPVKYRGAMGALHQLAIVIGILISQVIGLDFLLGNDYMWHILLGLSGAPAILQSLLLLVCPESPRYLYIKQGKVEDACKSLKRLKGDYDTSKDIAEMKAEKEEAMKEAKMSILRLLRSSVYRQQLFVALMMHFSQQFSGINAIFYYSTSIFQTAGVGQPVYATIGVGVVNIIFTLVSVLMVDRAGRRTLTLVGLGGMCCCAVAMTVGLAFQGAYSWMSYVSMVAIFMFVSFFEIGPGPIPWFIVAEIFSQGPRPAAIALAGFCNWTCNFIVGMVFPYLVSLCGSYVFIVFAVLLFGFTLFIYFRVPETKGKTFEEIAAVFHRKHGGVPPSKPQEEAEMVQLKGSSEA
Protein: Mitogen-activated protein kinase 13 (MAP kinase 13) (MAPK 13) (EC 2.7.11.24) (Mitogen-activated protein kinase p38 delta) (MAP kinase p38 delta) (Stress-activated protein kinase 4) (Q9Z1B7)
Organism: Mus musculus (Mouse)
Function: Serine/threonine kinase which acts as an essential component of the MAP kinase signal transduction pathway. MAPK13 is one of the four p38 MAPKs which play an important role in the cascades of cellular responses evoked by extracellular stimuli such as pro-inflammatory cytokines or physical stress leading to direct activation of transcription factors such as ELK1 and ATF2. Accordingly, p38 MAPKs phosphorylate a broad range of proteins and it has been estimated that they may have approximately 200 to 300 substrates each. MAPK13 is one of the less studied p38 MAPK isoforms. Some of the targets are downstream kinases such as MAPKAPK2, which are activated through phosphorylation and further phosphorylate additional targets. Plays a role in the regulation of protein translation by phosphorylating and inactivating EEF2K. Involved in cytoskeletal remodeling through phosphorylation of MAPT and STMN1. Mediates UV irradiation induced up-regulation of the gene expression of CXCL14. Plays an important role in the regulation of epidermal keratinocyte differentiation, apoptosis and skin tumor development. Phosphorylates the transcriptional activator MYB in response to stress which leads to rapid MYB degradation via a proteasome-dependent pathway. MAPK13 also phosphorylates and down-regulates PRKD1 during regulation of insulin secretion in pancreatic beta cells.
Interaction partners:
- MAP kinase-activated protein kinase 2
- Transcription factor Jun
- MAP kinase-activated protein kinase 3
- Dual specificity mitogen-activated protein kinase kinase 3
- Dual specificity mitogen-activated protein kinase kinase 6
- Cyclic AMP-dependent transcription factor ATF-2
- Dual specificity mitogen-activated protein kinase kinase 1
- Protein c-Fos
- Myocyte-specific enhancer factor 2C
- Dual specificity mitogen-activated protein kinase kinase 2
Sequence:
MSLTRKRGFYKQDINKTAWELPKTYLAPAHVGSGAYGAVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMHHENVIGLLDVFTPASSLRSFHDFYLVMPFMQTDLQKIMGMEFSEDKVQYLVYQMLKGLKYIHSAGIVHRDLKPGNLAVNEDCELKILDFGLARHTDTEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGAEFVQKLKDKAAKSYIQSLPQSPKKDFTQLFPRASPQAADLLDKMLELDVDKRLTAAQALAHPFFEPFRDPEEETEAQQPFDDALEHEKLSVDEWKQHIYKEISNFSPIARKDSRRRSGMKLQ
Protein: O-fucosyltransferase 29 (O-FucT-29) (EC 2.4.1.-) (O-fucosyltransferase family protein) (Q8LPF8)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Subcellular location: Membrane {ECO:0000255}; Single-pass type II membrane protein {ECO:0000305}.
Interaction partners:
- At1g19710
- O-fucosyltransferase 36
- Transmembrane protein
- At3g26950
- O-fucosyltransferase 23
- Probable xyloglucan galactosyltransferase GT11
- Trimethylguanosine synthase
- Transmembrane protein
- At4g12700
- AT3g56750/T8M16_80
Sequence:
MGVVAEVWRSSVRLLTNSPQLNGGSHKSALWKWRFFSAQPKRTVMWTWVCGFMLFSLGVISLFTGHVVSHLEWYSQQLSKRSLLDMSRREPIDVWKSKYSKFFYGCSERGRNFLPAVQEQSSNGYLLIAASGGLNQQRTGITDAVVVARILNATLVVPELDHHSYWKDDSDFSDIFDVNWFISSLAKDVTIVKRVPDRVMRAMEKPPYTTRVPRKSTLEYYLDQVLPILTRRHVLQLTKFDYRLANDLDEDMQKLRCRVNYHALRFTKRIQSVGMKVVKRMRKMAKRFIAVHLRFEPDMLAFSGCDFGGGEKERAELAEIRKRWDTLPDLDPLEERKRGKCPLTPHEVGLMLRALGFTNDTYIYVASGEIYGGEKTLKPLRELFPNFYTKEMLANDELKPLLPYSSRLAAIDYIVSDESDVFITNNNGNMAKILAGRRRYMGHKRTIRPNAKKLSALFMDREKMEWQTFAKKVKSCQRGFMGDPDEFKPGRGEFHEYPQSCICQRPFSYDKTSTDDEEEDMSEENHNSTSPGHVHLSSADNERDEVFPD
Protein: Protein GDF5-AS1, mitochondrial (GDF5 antisense RNA 1) (Growth/differentiation factor 5 opposite strand transcript protein) (Q5U4N7)
Organism: Homo sapiens (Human)
Subcellular location: Mitochondrion {ECO:0000305}.
Interaction partners:
Sequence:
MIQSSQPMSLKLTCSAFRLQRALRFLLGRLPWRVASGARRFRRWLNRYSYTVLSSWPERALISLKNRSRFLVRPNTRNRAFSWTCRAARSKPRPRRSTALPRSQASSSRHSWAEFLKFRKSFQMSNTSQPDPSRPGTERTSSKEAGCRPLGQLDSFSWAARPPPGAAGLAVSEGFFRKIRSSAPSSPSFSRALMSNTYLCFLTTGPRSSRENTQKSFPATSPREPVTSRLRGKAPALSPSRELSFTSAPF
Protein: threonine--tRNA ligase (EC 6.1.1.3) (Threonyl-tRNA synthetase) (Q53GX7)
Organism: Homo sapiens (Human)
Interaction partners:
Sequence:
MFEEKASSPSGKMGGEEKPIGAGEEKQKEGGKKKNKEGSGDGGRAELNPWPEYIYTRLEMYNILKAEHDSILAEKAEKDSKPIKVTLPDGKQVDAESWKTTPYQIACGISQGLADNTVIAKVNNVVWDLDRPLEEDCTLELLKFEDEEAQAVYWHSSAHIMGEAMERVYGGCLCYGPPIENGFYYDMYLEEGGVSSNDFPSLEALCKKIIKEKQAFERLEVKKETLLAMFKYNKFKCRILNEKVNTPTTTVYRCGPLIDLCRGPHVRHTGKIKALKIHKNSSTYWEGKADMETLQRIYGISFPDPKMLKEWEKFQEEAKNRDHRKIGRDQELYFFHELSPGSCFFLPKGAYIYNALIEFIRSEYRKRGFQEVVTPNIFNSRLWMTSGHWQHYSENMFSFEVEKELFALKPMNCPGHCLMFDHRPRSWRELPLRLADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAMEQIEDEIKGCLDFLRTVYSVFGFSFKLNLSTRPEKFLGDIEVWDQAEKQLENSLNEFGEKWELNSGDGAFYGPKIDIQIKDAIGRYHQCATIQLDFQLPIRFNLTYVSHDGDDKKRPVIVHRAILGSVERMIAILTENYGGKWPFWLSPRQVMVVPVGPTCDEYAQKVRQQFHDAKFMADIDLDPGCTLNKKIRNAQLAQYNFILVVGEKEKISGTVNIRTRDNKVHGERTISETIERLQQLKEFRSKQAEEEF
Protein: Membrane protein (M protein) (E1 glycoprotein) (Matrix glycoprotein) (Membrane glycoprotein) (P04135)
Organism: Porcine transmissible gastroenteritis coronavirus (strain Purdue) (TGEV)
Function: Component of the viral envelope that plays a central role in virus morphogenesis and assembly via its interactions with other viral proteins.
Subcellular location: Virion membrane {ECO:0000255|HAMAP-Rule:MF_04201}; Multi-pass membrane protein {ECO:0000255|HAMAP-Rule:MF_04201}. Host Golgi apparatus membrane {ECO:0000255|HAMAP-Rule:MF_04201}; Multi-pass membrane protein {ECO:0000255|HAMAP-Rule:MF_04201}. Note=Largely embedded in the lipid bilayer. {ECO:0000255|HAMAP-Rule:MF_04201}.
Interaction partners:
Sequence:
MKILLILACVIACACGERYCAMKSDTDLSCRNSTASDCESCFNGGDLIWHLANWNFSWSIILIVFITVLQYGRPQFSWFVYGIKMLIMWLLWPVVLALTIFNAYSEYQVSRYVMFGFSIAGAIVTFVLWIMYFVRSIQLYRRTKSWWSFNPETKAILCVSALGRSYVLPLEGVPTGVTLTLLSGNLYAEGFKIAGGMNIDNLPKYVMVALPSRTIVYTLVGKKLKASSATGWAYYVKSKAGDYSTEARTDNLSEQEKLLHMV
Protein: Phm7p (A0A1D8PI19)
Organism: Candida albicans (strain SC5314 / ATCC MYA-2876) (Yeast)
Subcellular location: Membrane {ECO:0000256|ARBA:ARBA00004141}; Multi-pass membrane protein {ECO:0000256|ARBA:ARBA00004141}.
Interaction partners:
- Nucleoporin
- NAD
Sequence:
MAGSSIPQSSNSSVSQFLSTLIPTLVVSVVFLLAFIVIHSKQRRVYEPRAVVESLPDDLRTETAPKGPFSWLTYLLAKPRTFYIQYAGTDGYFFLRFLFEFFCVCVLGAVITWPILFPVNATNGNNNTPGSNVKGFDILTFANIKDKWRTFAHVFLSWILFGAVIFLIYRELVYYVTYRHALQTTPLYDSLLSSRTLLLTEISTEYLQDDKLRGYFPTATNIWYSRDYKKLQKQVKERTKLANKYEGTLNKVLTKAVKLRNKCLKKSKPAPEPQDDIDKYLKDGKKRPTHKLKFLIGIKVDTLDYSPEKLGELNKEITKEQTEYQTYDQLPAVFIEFPSQLEMQKAYQAIPYQPDFKGVKTVINAAPEDIIWENLQLTSMKRRIKSIIANTILTLLIIFWCIPVAVVGAISNINVLTDKVPFLKFILKMPDVIMGVITGLLPVVALTILMSLVPPFIKWMGKISGRLTIQQVESYCQSWYFAFQVVNVFLAIALGSSAAAVATQIVQNPGEALQKLSSSFPKSVNFYYSYLCLEGLTISSGVLLQIVALILSHILGRILDGTPRAKWTRWNTLGQPAYSTLYPGFQLLTVIALSYSVIAPLILGFTAIAFILFYFAYIYTMIFVLRPSTVDARGTNYVKSLFQLFTGLFLAQLWITAIFVFSKNWACVALEGVIVVVTIAARLWMKWKFLPLVDAVPISAIKYAAGDPTYSYPIHDQGLKEIKVEGKNYWEGGNQLGLGPDPKDQVLPDRIPGNGPSSYAYDQQQQQNHRGSDSSAVDTKVGHGESLDKPKSPFTDFNNNHDAEKSAGFNPVNKAIAAPTQGVSWLTSFFQPKKDTFDIIKSDMPSSYFNYIEYHSDFIRHAYDDPAVTAEEPHIWIARDPMGLSEIEKNKALKEGVQVSDENATFDDKGALIFTGPPPAYEEPIRV
Protein: Arsenite methyltransferase (EC 2.1.1.137) (Methylarsonite methyltransferase) (S-adenosyl-L-methionine:arsenic(III) methyltransferase) (Q91WU5)
Organism: Mus musculus (Mouse)
Function: Catalyzes the transfer of a methyl group from AdoMet to trivalent arsenicals producing methylated and dimethylated arsenicals. It methylates arsenite to form methylarsonate, Me-AsO(3)H(2), which is reduced by methylarsonate reductase to methylarsonite, Me-As(OH)2. Methylarsonite is also a substrate and it is converted into the much less toxic compound dimethylarsinate (cacodylate), Me(2)As(O)-OH.
Subcellular location: Cytoplasm, cytosol {ECO:0000250|UniProtKB:Q8VHT6}.
Interaction partners:
- BLOC-1-related complex subunit 7
- Metal transporter CNNM2
- Lathosterol oxidase
Sequence:
MAASRDADEIHKDVQNYYGNVLKTSADLQTNACVTRAKPVPSYIRESLQNVHEDVSSRYYGCGLTVPERLENCRILDLGSGSGRDCYVLSQLVGEKGHVTGIDMTEVQVEVAKTYLEHHMEKFGFQAPNVTFLHGRIEKLAEAGIQSESYDIVISNCVINLVPDKQQVLQEVYRVLKHGGELYFSDVYASLEVPEDIKSHKVLWGECLGGALYWKDLAIIAQKIGFCPPRLVTADIITVENKELEGVLGDCRFVSATFRLFKLPKTEPAERCRVVYNGGIKGHEKELIFDANFTFKEGEAVAVDEETAAVLKNSRFAPDFLFTPVDASLPAPQGRSELETKVLIRDPFKLAEDSDKMKPRHAPEGTGGCCGKRKNC
Protein: Dof zinc finger protein (B3H6D1)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Subcellular location: Nucleus {ECO:0000256|PROSITE-ProRule:PRU00071, ECO:0000256|RuleBase:RU369094}.
Interaction partners:
Sequence:
MDATKWTQGFQEMINVKPMEQMISSTNNNTPQQQPTFIATNTRPNATASNGGSGGNTNNTATMETRKARPQEKVNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNVPVGGSSRKNKRSSTPLASPSNPKLPDLNPPILFSSQIPNKSNKDLNLLSFPVMQDHHHHGMSHFFHMPKIENNNTSSSIYASSSPVSALELLRSNGVSSRGMNTFLPGQMMDSNSVLYSSLGFPTMPDYKQSNNNLSFSIDHHQGIGHNTINSNQRAQDNNDDMNGASRVLFPFSDMKELSSTTQEKSHGNNTYWNGMFSNTGGSSW
Protein: DREF transcription factor (O96083)
Organism: Drosophila melanogaster (Fruit fly)
Interaction partners:
Sequence:
MSEGVPASPVAIGEIKYEDVSQLNFSKLYSPKMKSVYWRYFGFPSNDNNEVITKQNVVCIKCHKVLTNHGNTTNLRAHLQHRHKDLFKELCQEHDIHVPPRKTPRNVSHPPLSKRNVSSRRVKLEFINNRNHDNASDDELDEAAVATAAMQAEEDASSQTMLYETMVPFTYDEAENLVVEEERLLMEPKYGRKRKVATPSSALMHGRVIKHEEGGYAAVANIANLAEALTDIVIKDLRNVDSLYDAGFGEFLRQVLGNSAAMPEPHKIDSLINEMHASKFLEIGEITRDFTSEKPFSLAFEMWVNVEQRRFLSIFHHFLDEETHSVRGMLYATVEYNDYIVFDDLLTDFYLANCTLAIINYDEEEDLLHTYLREKNIPISLCYVSVIDKCLRRVFEIEEVATLLDQVKDLMQRHSTEIASKVSEVPMPTYNEHFPWTLYETLKFFAESISWSEDMDHLVISAKTVTEALSALVIALDTLRGEDIPLCSMLSPITSKILIKKLGIAEQDDPLMMNLKRTISSVLQAHVISNDNLTAAALLDPRFHRLTTIDNLERTVRMLTHKYNINFGGVGEGESNEVAATSSVVAIKSEPRVLDGSAPKKLGLKLLFDSNEIPNPPKRDADSSVESDLKRYRNEVVVQLDESPIEWWLKMGHIYGTLRDLASLYHSVPGVVTLSFKKALRDQIYDFNKRFMLTGSHIDASLFLHHHNN
Protein: Tumor necrosis factor ligand superfamily member 13 (A proliferation-inducing ligand) (APRIL) (TNF- and APOL-related leukocyte expressed ligand 2) (TALL-2) (TNF-related death ligand 1) (TRDL-1) (CD antigen CD256) (O75888)
Organism: Homo sapiens (Human)
Function: Cytokine that binds to TNFRSF13B/TACI and to TNFRSF17/BCMA. Plays a role in the regulation of tumor cell growth. May be involved in monocyte/macrophage-mediated immunological processes.
Subcellular location: Secreted {ECO:0000269|PubMed:11571266}.
Interaction partners:
- Tumor necrosis factor receptor superfamily member 13B
- Tumor necrosis factor receptor superfamily member 17
- Tumor necrosis factor receptor superfamily member 13C
- Tumor necrosis factor ligand superfamily member 12
- Tumor necrosis factor ligand superfamily member 13B
- Tumor necrosis factor receptor superfamily member 1A
- Protein SET
- Acidic leucine-rich nuclear phosphoprotein 32 family member A
- Nuclear pore complex protein Nup214
- Exportin-1
Sequence:
MPASSPFLLAPKGPPGNMGGPVREPALSVALWLSWGAALGAVACAMALLTQQTELQSLRREVSRLQGTGGPSQNGEGYPWQSLPEQSSDALEAWENGERSRKRRAVLTQKQKKQHSVLHLVPINATSKDDSDVTEVMWQPALRRGRGLQAQGYGVRIQDAGVYLLYSQVLFQDVTFTMGQVVSREGQGRQETLFRCIRSMPSHPDRAYNSCYSAGVFHLHQGDILSVIIPRARAKLNLSPHGTFLGFVKL
Protein: CD180 antigen (Q0V8G5)
Organism: Bos taurus (Bovine)
Subcellular location: Cell membrane {ECO:0000256|ARBA:ARBA00004251}; Single-pass type I membrane protein {ECO:0000256|ARBA:ARBA00004251}.
Interaction partners:
Sequence:
MAPCVSCFLLAVLISAGCKAIPSSDPKCTEKEGNRTYNCENLGLREIPDTLPNTTEVLEFSFNFLPTIQNTTFSRLINLIFLDLTRCQINWVHEDTFQSHHQLNTIVLTGNPLIFMAETSLTGPKFLKHLFLTQTGISNLKFIPVHNLENLESLHLGSNHISSINLPENFPTQNLKVLDFQNNAIHYISRKDTNSLEQATNLSLNFNGNDIKGIEPGAFSSKIFQSLKFGGSLNLFIIFKGLQNSTLQSLWLGTFEDTDDQYLTSATFEGLCDMSVESINLQKHRFSDLSSSTFQCFTRVQELDLTAAHLNGLPSGIEGMNSLKKLVLNANSFDQLCQINAASFPSLRDLYIKGNMRKLDLGTRCLEKLENLQKLDLSHSDIEASDCCNLQLKNLRHLQYLNLSYNEPLGLEDQAFKECPQLELLDVAFTHLHVKAPHSPFQNLHLLRVLNLSHCLLDTSNQHLLAGLQDLRHLNLQGNSFQDGSISKTNLLQMVGSLEILILSSCNLLSIDQQAFHGLRNVNHLDLSHNSLTGDSMDTLSHLKGLYLNMASNNIRIIPPHLLPALSQQSIINLSNNPLDCTCSNIHFITWYKENLHKLEDSEETTCANPPSLRGVKLSDVKLHCGITGVGIFFIVVFVFLLILLLIFSVKFILRWKYQHI
Protein: CDKI protein (Cyclin-dependent kinase inhibitor 1C) (Cyclin-dependent kinase inhibitor p57) (Q69DC0)
Organism: Rattus norvegicus (Rat)
Subcellular location: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
Interaction partners:
Sequence:
MGMSDVYLRSRTAMERLASSDTFPVIARSSACRSLFGPVDHEELGRELRMRLAELNAEDQNRWDFNFQQDVPLRGPGRLQWMEVDSESVPAFYRETVQVGRCRLQLGPRPPPVAVAVIPRSGPPAGEGPDGLEEAPEQPPSAPASAVVAEPTPPATPAPASDLTSDPIPDVTPVATSDSTPDPIPDVATQDGEEQVPEQVSEQVSEQGEESGAEPGDELGAEPVSEQGKQQGAEPVEEKDEEPVEEQGAEPVEEKDEEPVEGQNGELVEEQDENQELKDQPLSGIPGRPAAGTAAANANDFFAKRKRTAQENKASNDVPAGCPSPNVAPGVGAVEQTPRKRLR
Protein: Energy-coupling factor transporter transmembrane protein EcfT (ECF transporter T component EcfT) (Q5M245)
Organism: Streptococcus thermophilus (strain ATCC BAA-250 / LMG 18311)
Function: Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. Expression of the complex plus RibU in de-energized E.coli allows riboflavin uptake.
Subcellular location: Cell membrane {ECO:0000305|PubMed:23359690}; Multi-pass membrane protein {ECO:0000305|PubMed:23359690}.
Interaction partners:
- Energy-coupling factor transporter ATP-binding protein EcfA1
- Energy-coupling factor transporter ATP-binding protein EcfA2
- ABC transporter ATP-binding protein
- Biotin transporter
- Biotin transporter
- CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
- Cobalamin biosynthesis protein, putative transporter
- DUF4115 domain-containing protein
- Conserved hypothetical, predicted membrane protein
Sequence:
MDKLIIGRYIVGDSFIHRLDPRSKLLAMLIYIIVIFWANNPVTYAVITLFTLFLVFLSKIKLGFFLGGIKPMIWIILFSTLFQVFFNTRGNVLWSIGFFKITEVGLNQGWMIFLRFILIISFSTLLTLTTTPLSLSDAVESLLKPLTIFKVPAHEIGLMLSLSLRFVPTLMDDTTRIMNAQKARGVDFDEGNIIQKVRSIIPILIPLFASSFKRADALAIAMEARGYRGSEGRTKYRRLLWNCRDTLSIIAILALGLILFYLKS
Protein: Tail fiber protein (stf) (Gene product 27) (gp27) (P03764)
Organism: Escherichia phage lambda (Bacteriophage lambda)
Function: Forms tail fibers that play a role in primary attachment of virion to host receptors. Assembles with Tail fiber assembly protein to form fibers attached to virion tail tip. Fibers are about 35nm long and have a thin, uniform diameter. There are presumaby six fibers per virion. They bind in a reversible manner to host molecules, attaching transiently the virion to the host until tail tip interacts with LamB and injects viral DNA into the cell.
Subcellular location: Virion {ECO:0000305}.
Interaction partners:
Sequence:
MAVKISGVLKDGTGKPVQNCTIQLKARRNSTTVVVNTVGSENPDEAGRYSMDVEYGQYSVILQVDGFPPSHAGTITVYEDSQPGTLNDFLCAMTEDDARPEVLRRLELMVEEVARNASVVAQSTADAKKSAGDASASAAQVAALVTDATDSARAASTSAGQAASSAQEASSGAEAASAKATEAEKSAAAAESSKNAAATSAGAAKTSETNAAASQQSAATSASTAATKASEAATSARDAVASKEAAKSSETNASSSAGRAASSATAAENSARAAKTSETNARSSETAAERSASAAADAKTAAAGSASTASTKATEAAGSAVSASQSKSAAEAAAIRAKNSAKRAEDIASAVALEDADTTRKGIVQLSSATNSTSETLAATPKAVKVVMDETNRKAPLDSPALTGTPTAPTALRGTNNTQIANTAFVLAAIADVIDASPDALNTLNELAAALGNDPDFATTMTNALAGKQPKNATLTALAGLSTAKNKLPYFAENDAASLTELTQVGRDILAKNSVADVLEYLGAGENSAFPAGAPIPWPSDIVPSGYVLMQGQAFDKSAYPKLAVAYPSGVLPDMRGWTIKGKPASGRAVLSQEQDGIKSHTHSASASGTDLGTKTTSSFDYGTKTTGSFDYGTKSTNNTGAHAHSLSGSTGAAGAHAHTSGLRMNSSGWSQYGTATITGSLSTVKGTSTQGIAYLSKTDSQGSHSHSLSGTAVSAGAHAHTVGIGAHQHPVVIGAHAHSFSIGSHGHTITVNAAGNAENTVKNIAFNYIVRLA
Protein: Putative D-/L-hydantoinase subunit B (EC 3.5.2.-) (Hydantoin utilization protein B) (Q01263)
Organism: Pseudomonas sp. (strain NS671)
Function: Involved in the asymmetric conversion of racemic 5-substituted hydantoins to the corresponding L-amino acids. HyuA and HyuB are both required for the conversion of D- and L-5-substituted hydantoins to corresponding N-carbamoyl-D- and N-carbamoyl-L-amino acids, respectively.
Interaction partners:
Sequence:
MSKIHTDLKKIDPITVQVVLGSLENVAVEMGHKLARMSYSSIIRESEDFGCALVDVRGQQLCESSHSTPLQSGPIPGYIKGIREIMEDRNDTFNQGDVIMHNSPYHGASHGPDVGFCIPVFYKDELIGFSVTTAHHLDIGSSTPGSCGIVDAVDAYAEGLQFKAIKVYDQGVKNRYVWDILKDNIRAPKLVVGDMEAQIAAARIGAQRYIEIIEKYGLDTVQAASEELMNYSEKMMRDAIKKLPDGEYTAEGFLDGYLDSDDPAKKDLRINVTVKVDGSDLTVDLTGTSPQVTDKPINMPLLGTVDIAIYLTLRSILLDSTVYGNFPQNSGLIRPIKIVAPKGTLCNPIFPAPTIARFNSGNAVADTLMKALAQVVPHQVSAGVGNLQVVAFSGQSNENYWVYMDIMEGSYGGRYGKDGMDAVDTLYANTRNNPIEDIESHYPLRVNRYELRDNDSAPGKWRGGIGSIREVSFLADGSFSVEADGHKYAPWGFDDGQDGYVGSLSIRDNETNELVQLPSKLPNRHAQSGSTIQLVGPCGGGYGNPLEREPEKVLSDYLDGFITKEKALVEYGVTITDSEEIDYEKTNELRKV
Protein: KLF transcription factor 4 (A0A8I6B336)
Organism: Rattus norvegicus (Rat)
Subcellular location: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
Interaction partners:
Sequence:
MQPPGESDMAVSDALLPSFSTFASGPAGREKTLRPAGAPTNRWREELSHMKRLPPLPGRPYDLAATVATDLESGGAGAACSSNNPALPRRETEEFNDLLDLDFILSNSLSHQESVAATVTTSASASSSSSPASSGPASAPSTCSFSYPIRAGGDPGVAAGNTGGGLLYSRESAPPPTAPFNLADINDVSPSGGFVAELLRPELDPVYIPPQQPQPPGGGLMGKFVLKASLSTPGSEYTSPSVISVSKGSPDGSHPVVVAPYSGGPPRMCPKIKQEAVPSCTVSRSLEAHLSAGPQLSNGHRPNTHDFPLGRQLPTRTTPTLSPEELLNSRDCHPGLPLPPGFHPHPGPSYPPFLPDQMQSQVPSLHYQELMPPGSCLPEEPKPKRGRRSWPRKRTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLALHMKRHF
Protein: MAGUK p55 subfamily member 4 (Discs large homolog 6) (rDLG6) (Q9QYH1)
Organism: Rattus norvegicus (Rat)
Function: May play a role in retinal photoreceptors development.
Subcellular location: Cytoplasm. Note=Localized at photoreceptor synaptic terminals in retina. {ECO:0000250}.
Interaction partners:
- Protein PALS1
Sequence:
MRTVCLVKNQQPLGATIKRHEITGDILVARVIHGGLVERNGLLYAGDKLVEVNGVPVEGLDPEQVIHILAMSCGTIMFKVIPVSAPPVSSQTTVYVRAMIDYWPQEDPDIPCMDAGLPFLKGDILQIVDQSDALWWQARKISDIAICAGLIPSNHLLKRKQREFWWSQPYQPHTCLKSTRSKEEFVGDGQQFFIAGFRQQHANMRCTCSCYSAVGAPYEEVVRYQRQPADKHRLIVLVGPSGVGVNELRRQLIGCNPSCFQSAVPHTTRSPKSYEMDGREYHYVSRETFESLMYGHRMLEFGEYKGHLYGTSVNAVLAVLDEGKICVMDLEPQDIQLARTRELKPYVIFIKPPSMSSMRHSRRNAKIITDYFVDMKFKDEDLQEMEELAQKMESQFGQFFDHVIVNDNLQDARAQLLSAIQKAEEELQWVPEAWVSPGAES
Protein: Enkurin domain-containing protein (Q583F5)
Organism: Trypanosoma brucei brucei (strain 927/4 GUTat10.1)
Interaction partners:
Sequence:
MAQTSNNVTHSDKYHVCECYGHTQQLPNYKKLTNPRTLQGFYAKQKVSACPCIPNKREKNFNTTYCSENPAKRNVAFPEETYRDFEPGKHRVHKAASVPGDGATLRDPVTRARLVFPNACNYGGTVAKHTFPAIGQPRRLTPGERKYEQMYDRKEFLKAVLRDEICHRAEAEKQLEELENETGLRGSRHARLLAEAAAAAREAQLSEDHEEPKTVGEQYDAVMDELRFVTRQPVGSKLNIIRMYYTLEEQERMRNFARSFGSQKTSGRV
Protein: Claudin 18 (A0A8I5Y8A8)
Organism: Rattus norvegicus (Rat)
Subcellular location: Cell junction, tight junction {ECO:0000256|ARBA:ARBA00004435}. Cell membrane {ECO:0000256|ARBA:ARBA00004651}; Multi-pass membrane protein {ECO:0000256|ARBA:ARBA00004651}.
Interaction partners:
Sequence:
MITQSPPCSSMKGSGGVACNRARGSLSAGHTSPSWAFQSRQHAVARSKGSGRVLGCTETLYRETAMLQAVRALMIVGIVLGVIGILVSIFALKCIRIGSMDDSAKAKMTLTSGIMFIISGVCAIIGVSVFANMLVTNFWMSTANMYSGMGGMVQTVQTRYTFGAALFVGWIAGGLTLIGGVMMCIACRGLTPDDRNFKAVSYHASGQNVAYKPGGFKASTGFGSNARNKKIYDGGARTEDDEQSHPTKYDYV
Protein: Ceramide kinase-like isoform 6 (G0XYF4)
Organism: Mus musculus (Mouse)
Interaction partners:
Sequence:
MFRGRRRSRVGALEEAPPENPKAAAEPERVLLRGIFEIRRESCDVALGERALRWRRIQPELPAGGTRHDLLSKEESLELEDIFSVKLKRRCWAKHPGRDTLLGITLFICLKEQRNKLKDSTLDLINFSEDHCDIWFRQFKKILDGFTSRPKALKILLNPQSHRKESVHVYYEKVEPLLKLAGIETDVTITEYEGHALSLLDECELRGFDGVVCVGGDGSASEAARALLLRAQKNAGVEMDCIPTLVGAELPLGFIPAGSTNALAHSLFGTPHVVTATMHIILGHIRSVDVCTFSSAGKLLCFGFSAMFGFGGRTLALAEKYRWMSPSQRRDFAIIKALAKLKKSQRSAESDCGGHWQTIQGQFLNISIMAMPCPCSMAPRGFTPDTRLHNGSMALRVVRNTTRSEFVKHLKRHSSVKNQFNFPFVETYIIEEVKIHPKSNSNGYSPQEEGGNHTTASEHGFPWNVDGDLMEAASEVHIRLHPRLIRLYGGSLEEMNDCKVACDCI
Protein: At2g19990 (Pathogenesis-related protein (PR-1)) (Pathogenesis-related protein 1-like) (Pathogenesis-related protein-1-like protein) (Q39186)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Interaction partners:
- Regulatory protein NPR1
- Basic endochitinase B
- Pathogenesis-related protein 5
- Isochorismate synthase 1, chloroplastic
- Hevein-like preproprotein
- Defensin-like protein 16
- Phenylalanine ammonia-lyase 1
- Glucan endo-1,3-beta-glucosidase, acidic isoform
- Phenylalanine ammonia-lyase 3
- Phenylalanine ammonia-lyase 4
Sequence:
MNEMSFFGYSFIVVALFFDLTQAYRHTPAQPPKANANGDVKPQETLVVHNKARAMVGVGPMVWNETLATYAQSYAHERARDCAMKHSLGPFGENLAAGWGTMSGPVATEYWMTEKENYDYDSNTCGGDGVCGHYTQIVWRDSVRLGCASVRCKNDEYIWVICSYDPPGNYIGQRPY