wanglab/gogpt-training-data huggingface dataset:
Protein: ATP-dependent Clp protease proteolytic subunit, mitochondrial (EC 3.4.21.92) (Caseinolytic mitochondrial matrix peptidase proteolytic subunit) (Endopeptidase Clp) (Q16740)
Organism: Homo sapiens (Human)
Function: Protease component of the Clp complex that cleaves peptides and various proteins in an ATP-dependent process. Has low peptidase activity in the absence of CLPX. The Clp complex can degrade CSN1S1, CSN2 and CSN3, as well as synthetic peptides (in vitro) and may be responsible for a fairly general and central housekeeping function rather than for the degradation of specific substrates. Cleaves PINK1 in the mitochondrion.
Subcellular location: Mitochondrion matrix {ECO:0000269|PubMed:10525407, ECO:0000269|PubMed:22354088}.
Interaction partners:
- Mitochondrial disaggregase
- ATP-dependent clpX-like chaperone, mitochondrial
- T-box transcription factor TBX22
- 10 kDa heat shock protein, mitochondrial
- Lon protease homolog, mitochondrial
- GrpE protein homolog 1, mitochondrial
- 60 kDa heat shock protein, mitochondrial
- Small ribosomal subunit protein uS9
- ATP-dependent zinc metalloprotease YME1L1
- Succinate dehydrogenase iron-sulfur subunit, mitochondrial
Sequence:
MWPGILVGGARVASCRYPALGPRLAAHFPAQRPPQRTLQNGLALQRCLHATATRALPLIPIVVEQTGRGERAYDIYSRLLRERIVCVMGPIDDSVASLVIAQLLFLQSESNKKPIHMYINSPGGVVTAGLAIYDTMQYILNPICTWCVGQAASMGSLLLAAGTPGMRHSLPNSRIMIHQPSGGARGQATDIAIQAEEIMKLKKQLYNIYAKHTKQSLQVIESAMERDRYMSPMEAQEFGILDKVLVHPPQDGEDEPTLVQKEPVEAAPAAEPVPAST
Protein: BTB domain-containing protein (Q7JPF0)
Organism: Caenorhabditis elegans
Subcellular location: Membrane {ECO:0000256|ARBA:ARBA00004141}; Multi-pass membrane protein {ECO:0000256|ARBA:ARBA00004141}.
Interaction partners:
- Ubiquitin-like domain-containing protein
- MiRP K channel accessory Subunit
- MinK-related peptide, potassium channel accessory subunit protein 4
- Large ribosomal subunit protein eL34
- Small ribosomal subunit protein eS28
- Large ribosomal subunit protein eL31
- Large ribosomal subunit protein eL21
- Large ribosomal subunit protein eL43
- Large ribosomal subunit protein uL14
- Small ribosomal subunit protein eS19
Sequence:
MINTRSCRYVALSTSDKDSNQIAMVIPSTRKGHAASRDNFGNSNHHGDEIVHRLNNGRRSEIDEVKPDLVSGAGDTVIKLNVGGTSFRIRISSIFARSADEKLSAFAQLNHEQRLQACDAFLMPQEEYYLERSAVLFDSIFKYYISGQLHRPLDVCPTEFATELAYWKINDGLMSNCCWRGYNMSPSLEELVAPKEKKIELHDRSMRSRIHQFCEGDGSLFSTLFTFGSITFVLISVIGLVLGSIHEFQVPIYKKGGKSERISNWSIVENENIIWEPHPIFGYVETVCIIWFTVEFIVRLAVTPNRFQFLVGIMNIVDMIAIIPFYLELGLALFGIDVASLSDIKGALLVVRVLRVLRVVRILKLGRYSSGMRTFALTLKSSARQLGMMGMVLSTGVVFFSTLLYFVEKDEKDTPFTSIPAAFWWAIVTMTTVGYGDYVPVTVPGKLIASGAIISGVLVLALPITIIVDNFMKVSGNVNANIFSSANQRPIDVAE
Protein: FG-nucleoporin (A0A1D8PFQ0)
Organism: Candida albicans (strain SC5314 / ATCC MYA-2876) (Yeast)
Subcellular location: Nucleus membrane {ECO:0000256|ARBA:ARBA00004620}; Peripheral membrane protein {ECO:0000256|ARBA:ARBA00004620}; Nucleoplasmic side {ECO:0000256|ARBA:ARBA00004620}. Nucleus, nuclear pore complex {ECO:0000256|ARBA:ARBA00004567}.
Interaction partners:
- Nucleoporin NSP1
- Nucleoporin
- FG-nucleoporin
- Nuclear pore protein
- FG-nucleoporin
- Nuclear pore complex protein Nup85
- Nucleoporin
- Nuclear pore complex protein
- Uncharacterized protein
- RNA export factor
Sequence:
MFGSTTQSSTTPSFGGFGSTNNTNSSSLFGAKPNTTTAGTTGGGLFGSSTNQQQQPASGGLFGAKPATGTTTGGGLFGSQPSTNTTTGGGLFGSQNNQQQQQQQSGGLFGGGQQQQTNQASNTSGGGLFGGGQQQQQTNQTANTSGSGLFGAKPANTNTTSGGGLFGGQNNTANTTSTGGGLFGNKPSGGGLFGQQQNTANTANTGVGGGLFGSGTTTNTSGGAGGLFGNKPTTTTTTIGGGLFGGGQQQQQQQQQQIQTPQLTGMTRVGDLPPNIKNELEQFDKYINTQHVIATTLNSDMSKHNNLINTIPKDINYLQNKVLSTKQALKFDINQLINLKNMNNEITEDINKIMQLILQLSTPGTKLSSSFQLNEFFIKKIKKYYQMLTQYESMIKELEMILTGLEKSCTEGFGNLFGIVQVIKSQYSLFMELTETMAQLHNEVNRLTK
Protein: Uncharacterized protein (Q57VD1)
Organism: Trypanosoma brucei brucei (strain 927/4 GUTat10.1)
Interaction partners:
Sequence:
MKTIPPKSRVPPDWIHPALHRQWQRRDKLRTPHELRLEELDVQRTEMEEASRRIMSIVSEKKSALEKLDRQREKAKADIDLDEAAAGEITGVLDRLTSQITVHKTLPRCDARLLDTSDSENFASGTAHCVLSVECGSTWGAVASCFPCDNEIKRSFFSQYAPLFNVTSDDSSAAQKVGGAAFFDEGCLLSVDQVSCFNPACPYWHKEQLTHLKLTARKLVSRAANFIRGNRNNCDVAALFHRFRMSMEASTALHDAVRIERDMMNCIATLGWAAIFLQKDEVAENKQGRYRPPPSRITWDAPIQSKPHMPLMQKLYSLLRNPQECSAWESLIGSSPSTLIADAVSLFQRHVDVLSWRCLMRVAGDTPERLLWLASRGIEIFPTSPSIRLSHLYALLHSGNTASECVDVCLESVRILSVQASKCTLSSSGKVEWSESVARYIAYMIAMTCVRVAPMDAQAAMRLLTYAVKVPGRVCLLPLAQQNLTLMLIAICQTGKLEGMNDLPLASISDVTFALSEHFPGRPQDACAGLLSRQLNMNAGCAAAGIDAELMDRMQSAVHLSLMRAFSSNAVLVERILTKVKMGSVTAMAELWCDYLRVVRQHDGTEALVSLIRPLLEECESPLLILHFVKILDFNAEDTTAVARSAVQRFAEENGIAVENIASLASSETVTFPVSDWVPFILLHARSLAPQQRVELIFSIPPVLYCEVPELVFLLWFEIIPPTLLLKDDELFRRCAEYGLVLLREPFLNHFSPIDCNFDEMIAIPHIASLALYRAVPVLLGAAHHLTAHYRKIVLDVSTELHVIHPYLYAT
Protein: Transcription factor bHLH104 (Basic helix-loop-helix protein 104) (AtbHLH104) (bHLH 104) (Transcription factor EN 136) (bHLH transcription factor bHLH104) (Q8L467)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Subcellular location: Nucleus {ECO:0000255|PROSITE-ProRule:PRU00981, ECO:0000269|PubMed:25452667}.
Interaction partners:
- Transcription factor bHLH101
- Transcription factor ORG3
- Transcription factor bHLH100
- Transcription factor ORG2
- Probable nicotianamine synthase 4
- Zinc finger protein BRUTUS
- Ferric reduction oxidase 2
- Fe
- Ferric reduction oxidase 3, mitochondrial
- Protein ZINC INDUCED FACILITATOR 1
Sequence:
MYPSLDDDFVSDLFCFDQSNGAELDDYTQFGVNLQTDQEDTFPDFVSYGVNLQQEPDEVFSIGASQLDLSSYNGVLSLEPEQVGQQDCEVVQEEEVEINSGSSGGAVKEEQEHLDDDCSRKRARTGSCSRGGGTKACRERLRREKLNERFMDLSSVLEPGRTPKTDKPAILDDAIRILNQLRDEALKLEETNQKLLEEIKSLKAEKNELREEKLVLKADKEKTEQQLKSMTAPSSGFIPHIPAAFNHNKMAVYPSYGYMPMWHYMPQSVRDTSRDQELRPPAA
Protein: Protein kinase (Q384A2)
Organism: Trypanosoma brucei brucei (strain 927/4 GUTat10.1)
Interaction partners:
- Longin domain-containing protein
- Synaptobrevin-type vesicle transport protein, putative
- Coatomer subunit gamma
- Vesicle-fusing ATPase
- Vesicle-fusing ATPase
- Coatomer subunit beta'
Sequence:
MLSKLFRYDTKLQGKQELSTADHRSLLELSMTDNITSVEIPQYRVRGTFVEYVIECTKRNMTWQVFRRYQQFKALDQSLKQLCSRGSSRHCDYGVIPVLCGSHWTEVTNQSIDLVEKRRRHLEIYLRQLLVPGNVFYVAKTVIYDFLHDGAVPAQHQRRAIRPLIGFATPDSLADLHLENRNGEGSASRLGAASTLNDKSISMLGPSAVGESDRVDDGVGDEEEEPCKSPPGETVESGEECEDLPSADNSEAEDVRVPPPGSLCRQCNAEFSSVLYPHRCFFCRQQFCRDCLHPVELEEGEVARSCVQCYENFARKTCKPQYPPTPMASTPILQCAPAGGALDPLNLLGSTSHVRTDVTLSDFKLVTTVGRGTFGKVMKVIFREDGKVYAMKVLNKCVIHKRRMIEYIREEKNIMSSLPSHPYIVTCHFAFQTDYHLFFVLDYLPGGDMHSRVYPKLKLTESDVRLYIAELVLALQHLHRHDIAHRDVKLENIVLGEDGHLKLTDFGLARMNFSRQRRRSFVGSPEYLPPETIQGKYQTKAVDWWSAGVMLYEMLSGKTPFYSAYNCEIYNNVLKAELDLTAPCFTPEAASLIEQLLQSHPKARLQDAGAIKAHPYFASIDWAALEGKKISAPIQLDLMGNDMKYIKWKFTAEWAVIYKPPGVTRATIDLLINRFSNFAHVSEGTPPTPHLPIGQQQEEVSDGVTNPPDITGVWNVVKVEMQTEDGKITHPWGSAVCGVLAYFPEGQFSMQLTSYMRPHLRQQFVDRAVREDLVEMCNSYAGSFGKYQIKPGSNIITHRLHGCLCPNLTGSTQKYFFEVRERKENGAKVLKLFTACNALPGEDISAQTVLTWERTGSC
Protein: Ribosome assembly protein 3 (Q05942)
Organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Function: Required for efficient biogenesis of the 60S ribosomal subunit.
Subcellular location: Nucleus, nucleolus {ECO:0000269|PubMed:14562095, ECO:0000269|PubMed:15126390}.
Interaction partners:
- ATP-dependent RNA helicase DBP6
- Nucleolar pre-ribosomal-associated protein 2
- 60S ribosome subunit biogenesis protein NOP8
- Ribosome biogenesis protein MAK21
- Nucleolar pre-ribosomal-associated protein 1
- ATP-dependent RNA helicase DBP3
- Ribosome biogenesis protein 15
- Ribosomal RNA-processing protein 15
- Nucleolar protein 16
- ATP-dependent RNA helicase HAS1
Sequence:
MSAGDISAINIKSVKKNRRRKKRRTADVSSSDSSSSDPSSESEKEEIQNGAIEEHVGENGKSDHVFSKGNDEDKQEDIAIEVSDVELTDEESKDLKLNSKEVIDDLTKISLSKIPEPTKSQNKEGFMNASKIAENIKLAREEYNELAENFVPKGKDKTKLREEYLNLLFENYGDDINRLRAAPDFTNKSLSILADALQEGIGMFDIGELELVLKNKEMEN
Protein: Cbp/p300-interacting transactivator 2 (MSG-related protein 1) (MRG-1) (P35srj) (Q99967)
Organism: Homo sapiens (Human)
Function: Transcriptional coactivator of the p300/CBP-mediated transcription complex. Acts as a bridge, linking TFAP2 transcription factors and the p300/CBP transcriptional coactivator complex in order to stimulate TFAP2-mediated transcriptional activation. Positively regulates TGF-beta signaling through its association with the SMAD/p300/CBP-mediated transcriptional coactivator complex. Stimulates the peroxisome proliferator-activated receptors PPARA transcriptional activity. Enhances estrogen-dependent transactivation mediated by estrogen receptors. Acts also as a transcriptional corepressor; interferes with the binding of the transcription factors HIF1A or STAT2 and the p300/CBP transcriptional coactivator complex. Participates in sex determination and early gonad development by stimulating transcription activation of SRY. Plays a role in controlling left-right patterning during embryogenesis; potentiates transcriptional activation of NODAL-mediated gene transcription in the left lateral plate mesoderm (LPM). Plays an essential role in differentiation of the adrenal cortex from the adrenogonadal primordium (AGP); stimulates WT1-mediated transcription activation thereby up-regulating the nuclear hormone receptor NR5A1 promoter activity. Associates with chromatin to the PITX2 P1 promoter region.
Subcellular location: Nucleus {ECO:0000269|PubMed:12586840, ECO:0000269|PubMed:8901575, ECO:0000269|PubMed:9887100}. Note=Colocalizes with EP300 in dot-like structures.
Interaction partners:
- Histone acetyltransferase p300
- CREB-binding protein
- Transcription factor AP-2-alpha
- Transcription factor AP-2 gamma
- Forkhead box protein O3
- Hypoxia-inducible factor 1-alpha
- LIM/homeobox protein Lhx2
- Transcription factor AP-2-beta
- Forkhead box protein O1
- Endothelial PAS domain-containing protein 1
Sequence:
MADHMMAMNHGRFPDGTNGLHHHPAHRMGMGQFPSPHHHQQQQPQHAFNALMGEHIHYGAGNMNATSGIRHAMGPGTVNGGHPPSALAPAARFNNSQFMGPPVASQGGSLPASMQLQKLNNQYFNHHPYPHNHYMPDLHPAAGHQMNGTNQHFRDCNPKHSGGSSTPGGSGGSSTPGGSGSSSGGGAGSSNSGGGSGSGNMPASVAHVPAAMLPPNVIDTDFIDEEVLMSLVIEMGLDRIKELPELWLGQNEFDFMTDFVCKQQPSRVSC
Protein: Transmembrane protein (Q9LHA3)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Interaction partners:
Sequence:
MTHHRITTYFNGGSASIFLLLLLITTTSSSSPPIPGLDTFLTNQYRLDPKSSNDSFTSLSSSLKRSLSSSSIHFSSLSKSLLSLSISIPLNVRFIGDSFPSSAASTLSEFISAAVTNDNFHVISPSPDSSTNHKLVISHSLHLDASLSPQSLSTRLDSTLKTLISSTTSSLRSNLLSIQYNPIDEIIKQEYEKEKHGDGGVYIYLISLGSQAKPYAYSYSHGDSSAGFTKCLGSIWTGKDRYLWIDLSAGPVDYGPALSGDGVLPRGEFHPLAALHGRPKSEKALLADLASLVYNAYQVLIVPSLRIPVYFEDTLVVQFIHVYGSEVKDSSGLDLEFVKRTFMDEAESGGLLLGEQKLSFKSYSVNYRECSICSFAVSRGMNSYTSRFLFDNYTLIVSEYLDSKHMHRALTDSAEELRRVAGIVEEEGNEFARVLPVYVFDLDINTPLLLDRYHQSVAFRDMVIAVRTRGTQTVSDYTCNGRHVFVHTRDLERPLVGSILQSMWGVSSTHLTWSPRHNTTLVDYTWSIGQTPFGPFSDISSLSFVQKDAAKRNVILTSLNTTITSAIDVIDSAVAYGGDVILRKQNRHSEFMQRWNLMQYKLDKTVSALSHNEFEMALFYLRSASHDLYSVHSVVYLASQRVEASLNCFKDPPFPWGTVSVSGFGLMAVGYVFSKRDRLFRNKRKQF
Protein: Histone deacetylase 5 (HD5) (EC 3.5.1.98) (Histone deacetylase mHDA1) (Q9Z2V6)
Organism: Mus musculus (Mouse)
Function: Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes. Involved in muscle maturation by repressing transcription of myocyte enhancer MEF2C. During muscle differentiation, it shuttles into the cytoplasm, allowing the expression of myocyte enhancer factors (By similarity). Serves as a corepressor of RARA and causes its deacetylation (By similarity). In association with RARA, plays a role in the repression of microRNA-10a and thereby in the inflammatory response (By similarity).
Subcellular location: Nucleus. Cytoplasm. Note=Shuttles between the nucleus and the cytoplasm. In muscle cells, it shuttles into the cytoplasm during myocyte differentiation. The export to cytoplasm depends on the interaction with a 14-3-3 chaperone protein and is due to its phosphorylation at Ser-250 and Ser-488 by AMPK, CaMK1 and SIK1.
Interaction partners:
- Nuclear receptor corepressor 2
- Nuclear receptor corepressor 1
- Histone deacetylase 4
- Myocyte-specific enhancer factor 2C
- Mothers against decapentaplegic homolog 3
- Nuclear receptor subfamily 2 group E member 1
- B-cell lymphoma 6 protein homolog
- Ankyrin repeat family A protein 2
- Histone deacetylase 2
- Calcium/calmodulin-dependent protein kinase type IV
Sequence:
MNSPNESDGMSGREPSLGILPRTPLHSIPVAVEVKPVLPGAMPSSMGGGGGGSPSPVELRGALAGPMDPALREQQLQQELLVLKQQQQLQKQLLFAEFQKQHDHLTRQHEVQLQKHLKQQQEMLAAKRQQELEQQRQREQQRQEELEKQRLEQQLLILRNKEKSKESAIASTEVKLRLQEFLLSKSKEPTPGGLNHSLPQHPKCWGAHHASLDQSSPPQSGPPGTPPSYKLPLLGPYDSRDDFPLRKTASEPNLKVRSRLKQKVAERRSSPLLRRKDGTVISTFKKRAVEITGTGPGVSSVCNSAPGSGPSSPNSSHSTIAENGFTGSVPNIPTEMIPQHRALPLDSSPNQFSLYTSPSLPNISLGLQATVTVTNSHLTASPKLSTQQEAERQALQSLRQGGTLTGKFMSTSSIPGCLLGVALEGDTSPHGHASLLQHVCSWTGRQQSTLIAVPLHGQSPLVTGERVATSMRTVGKLPRHRPLSRTQSSPLPQSPQALQQLVMQQQHQQFLEKQKQQQMQLGKILTKTGELSRQPTTHPEETEEELTEQQEALLGEGALTIPREGSTESESTQEDLEEEEEEEEEEEEDCIQVKDEDGESGPDEGPDLEESSAGYKKLFADAQQLQPLQVYQAPLSLATVPHQALGRTQSSPAAPGSMKSPTDQPTVVKHLFTTGVVYDTFMLKHQCMCGNTHVHPEHAGRIQSIWSRLQETGLLGKCERIRGRKATLDEIQTVHSEYHTLLYGTSPLNRQKLDSKKLLGPISQKMYAMLPCGGIGVDSDTVWNEMHSSSAVRMAVGCLVELAFKVAAGELKNGFAIIRPPGHHAEESTAMGFCFFNSVAITAKLLQQKLSVGKVLIVDWDIHHGNGTQQAFYNDPSVLYISLHRYDNGNFFPGSGAPEEVGGGPGVGYNVNVAWTGGVDPPIGDVEYLTAFRTVVMPIAQEFSPDVVLVSAGFDAVEGHLSPLGGYSVTARCFGHLTRQLMTLAGGRVVLALEGGHDLTAICDASEACVSALLSVELQPLDEAVLQQKPSVNAVATLEKVIEIQSKHWSCVQRFAAGLGCSLREAQTGEKEEAETVSAMALLSVGAEQAQAVATQEHSPRPAEEPMEQEPAL
Protein: Alpha-fetoprotein (Alpha-1-fetoprotein) (Alpha-fetoglobulin) (P02772)
Organism: Mus musculus (Mouse)
Function: Binds estrogens, fatty acids and metals.
Subcellular location: Secreted.
Interaction partners:
- Prothrombin
- Glypican-3
- Apolipoprotein A-II
- Albumin
- Keratin, type I cytoskeletal 19
- POU domain, class 5, transcription factor 1
- Hepatocyte nuclear factor 4-alpha
- Transcription factor Jun
- Homeobox protein NANOG
- Transthyretin
Sequence:
MKWITPASLILLLHFAASKALHENEFGIASTLDSSQCVTEKNVLSIATITFTQFVPEATEEEVNKMTSDVLAAMKKNSGDGCLESQLSVFLDEICHETELSNKYGLSGCCSQSGVERHQCLLARKKTAPASVPPFQFPEPAESCKAHEENRAVFMNRFIYEVSRRNPFMYAPAILSLAAQYDKVVLACCKADNKEECFQTKRASIAKELREGSMLNEHVCSVIRKFGSRNLQATTIIKLSQKLTEANFTEIQKLALDVAHIHEECCQGNSLECLQDGEKVMTYICSQQNILSSKIAECCKLPMIQLGFCIIHAENGVKPEGLSLNPSQFLGDRNFAQFSSEEKIMFMASFLHEYSRTHPNLPVSVILRIAKTYQEILEKCSQSGNLPGCQDNLEEELQKHIEESQALSKQSCALYQTLGDYKLQNLFLIGYTRKAPQLTSAELIDLTGKMVSIASTCCQLSEEKWSGCGEGMADIFIGHLCIRNEASPVNSGISHCCNSSYSNRRLCITSFLRDETYAPPPFSEDKFIFHKDLCQAQGKALQTMKQELLINLVKQKPELTEEQLAAVTADFSGLLEKCCKAQDQEVCFTEEGPKLISKTRDALGV
Protein: Tubby-like F-box protein 11 (AtTLP11) (Q6NPQ1)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Interaction partners:
- Transcription factor bHLH103
- NDR1/HIN1-like 25
- Mechanosensitive ion channel protein 4
- NDR1/HIN1-like protein 6
- Phospholipid scramblase
Sequence:
MTLRSLILEMRSRPHRVVHDLAAAAAADSTSVSSQDYRWSEIPEELLREILIRVEAADGGGWPSRRSVVACAGVCRGWRLLMNETVVVPEISSKLTFPISLKQPGPRDSLVQCFIKRNRITQSYHLYLGLTNSLTDDGKFLLAACKLKHTTCTDYIISLRSDDMSRRSQAYVGKVRSNFLGTKFTVFDGNLLPSTGAAKLRKSRSYNPAKVSAKVPLGSYPVAHITYELNVLGSRGPRKMQCLMDTIPTSTMEPQGVASEPSEFPLLGTRSTLSRSQSKPLRSSSSHLKETPLVLSNKTPRWHEQLRCWCLNFHGRVTVASVKNFQLVAAGASCGSGTGMSPERQSERIILQFGKVGKDMFTMDYGYPISAFQAFAICLSSFETRIACE
Protein: Uncharacterized fimbrial-like protein YadM (P37018)
Organism: Escherichia coli (strain K12)
Function: Part of the yadCKLM-htrE-yadVN fimbrial operon. Could contribute to adhesion to various surfaces in specific environmental niches.
Subcellular location: Fimbrium {ECO:0000305}.
Interaction partners:
- Uncharacterized fimbrial-like protein YadL
- Uncharacterized fimbrial-like protein YadK
- Uncharacterized fimbrial-like protein YadC
- Outer membrane usher protein HtrE
- Uncharacterized fimbrial-like protein YadN
- Probable fimbrial chaperone YadV
- Uncharacterized fimbrial-like protein YfcP
Sequence:
MIKTTPHKIVILMGILLSPSVFATDINVEFTATVKATTCNITLTGNNVTNDGNNNYTLRIPKMGLDKIANKTTESQADFKLVASGCSSGISWIDTTLTGNASSSSPKLIIPQSGDSSSTTSNIGMGFKKRTTDDATFLKPNSAEKIRWSTDEMQPDKGLEMTVALRETDAGQGVPGNFRALATFNFIYQ
Protein: Ochratoxinase (OTase) (EC 3.4.17.-) (Amidohydrolase 2) (Amidase 2) (Carboxypeptidase Am2) (A2R2V4)
Organism: Aspergillus niger (strain ATCC MYA-4892 / CBS 513.88 / FGSC A1513)
Function: Carboxypeptidase that catalyzes the release of a C-terminal amino acid with specific catalytic activity for aromatic amino acids such as phenylalanine. Is able to degrade ochratoxin A, one of the five major mycotoxins most harmful to humans and animals that is produced by Aspergillus and Penicillium species and occurs in a wide range of agricultural products.
Subcellular location: Secreted {ECO:0000269|PubMed:24947135}.
Interaction partners:
Sequence:
MVRRIASATPMVQSPMSPLGTTYCVRPNPVSLNLQRRPLVIASTDEAKVTIIYAGLLIPGDGEPLRNAALVISDKIIAFVGSEADIPKKYLRSTQSTHRVPVLMPGLWDCHMHFGGDDDYYNDYTSGLATHPASSGARLARGCWEALQNGYTSYRDLAGYGCEVAKAINDGTIVGPNVYSSGAALSQTAGHGDIFALPAGEVLGSYGVMNPRPGYWGAGPLCIADGVEEVRRAVRLQIRRGAKVIKVMASGGVMSRDDNPNFAQFSPEELKVIVEEAARQNRIVSAHVHGKAGIMAAIKAGCKSLEHVSYADEEVWELMKEKGILYVATRSVIEIFLASNGEGLVKESWAKLQALADSHLKAYQGAIKAGVTIALGTDTAPGGPTALELQFAVERGGMTPLEAIKAATANAPLSVGPQAPLTGQLREGYEADVIALEENPLEDIKVFQEPKAVTHVWKGGKLFKGPGIGPWGEDARNPFL
Protein: Decapping mRNA 1B (F5GZK9)
Organism: Homo sapiens (Human)
Interaction partners:
Sequence:
MKNLTQYEQLKAHQGTGAGISPVILNSGEGKEVDILRMLIKAKDEYTKCKTCSEPKKITSSSAIYDNPNLIKPIPVKPSENQQQRIPQPNQTLDPEPQHLSLTALFGKQDKATCQETVEPPQTLHQQQQQQQQQQEKLPIRQGVVRSLSYEEPRRHSPPIEKQLCPAIQKLMVRSADLHPLSELPENRPCENGSTHSAGEFFTGPVQPGSPHNIGTSRGVQNASRTQNLFEKLQSTPGAANKCDPSTPAPASSAALNRSRAPTSVTPVAPGKGLAQPPQAYFNGSLPPQTVGHQAHGREQSTLPRQTLPISGSQTGSSGVISPQELLKKLQIVQQEQQLHASNRPALAAKFPVLAQSSGTGKPLESWINKTPNTEQQTPLFQYSQISRAE
Protein: Sarcosine oxidase, beta subunit (Q5JFG7)
Organism: Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) (Pyrococcus kodakaraensis (strain KOD1))
Interaction partners:
- Sarcosine oxidase, alpha subunit
- Proline dehydrogenase, alpha subunit
- Probable aminomethyltransferase
- Serine hydroxymethyltransferase
- 2-amino-3-oxobutyrate coenzyme A ligase
- Probable glycine dehydrogenase
- Proline dehydrogenase, beta subunit
- Probable glycine dehydrogenase
- Proline dehydrogenase, delta subunit
- Proline dehydrogenase, gamma subunit
Sequence:
MPTRELPEKSEITIIGGGIVGVTIAHELAKRGEEVTVIEKRFIGSGSTFRCGTGIRQQFNDEANVQVMKRSVELWKKYSEEYGFPFQQTGYLFLLYDDEEVETFKRNIAIQNKFGVPTRLITPEEAKEIVPLLDISEVVAASWNPTDGKASPFHSTAKFALHAEEFGAKLVEYTEVKDFIIENGEIKGLKTSRGTIKTGIVVNATNAWAKLINAMAGIRTKIPIEPYKHQAVITQPIKKGSVKPMVISFRYGHAYLTQTSHGGIIGGVGYEEGPTYDLNPTYEFLREVSYYFTKIIPALRELLILRTWAGYYAKTPDSNPAIGKIEELSDYYIAAGFSGHGFMMAPAVAEMVADLITKGKTDLPAWWYDPYRFERGELRGKALQMG
Protein: ADP-ribosylation factor 3 (AtARF3) (Protein ARF-LIKE 1) (AtARL1) (P40940)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: GTP-binding protein involved in protein trafficking; may modulate vesicle budding and uncoating within the Golgi apparatus.
Subcellular location: Golgi apparatus {ECO:0000269|PubMed:16236155, ECO:0000269|PubMed:16830178}.
Interaction partners:
- Auxin transporter protein 1
- Protein GRIP
- Kinesin-like protein KIN-14E
- Auxin response factor 6
- Auxin response factor 13
- Auxin response factor 2
- Auxin response factor 5
- Auxin response factor 8
- Auxin response factor 7
- Coatomer subunit gamma
Sequence:
MGILFTRMFSSVFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNNIKFQVWDLGGQTSIRPYWRCYFPNTQAVIYVVDSSDTDRIGVAKEEFHAILEEDELKGAVVLIFANKQDLPGALDDAAVTEALELHKIKSRQWAIFKTCAVKGEGLFEGLDWLSNTLKSGSG
Protein: Growth hormone (A4GX92)
Organism: Ovis aries (Sheep)
Subcellular location: Secreted {ECO:0000256|ARBA:ARBA00004613, ECO:0000256|RuleBase:RU003618}.
Interaction partners:
Sequence:
AFPAMSLSSLFANAVLRAQHLHQLAADTFKEFERTYIPEGQRYSIQNTQVAFCFSETIPAPTGKNEAQQKSDLELLRISLLLIQSWLGPLQFLSRVFTNSLVFGTSDRVYEKLKDLEEGILALMRELEDGTPRAGQILKQTYDKFDTNMRSDDALLKNYGLLSCFRKDLHKTETYLRVMKCRRFGEASCAF
Protein: DASH complex subunit dad3 (Outer kinetochore protein dad3) (P62505)
Organism: Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Function: Component of the DASH complex, a microtubule-binding subcomplex of the outer kinetochore that is essential for proper chromosome segregation. The DASH complex mediates the formation and maintenance of bipolar kinetochore-microtubule attachments by forming closed rings around spindle microtubules and establishing interactions with proteins from the central kinetochore (By similarity).
Subcellular location: Nucleus {ECO:0000250|UniProtKB:P69850}. Cytoplasm, cytoskeleton, spindle {ECO:0000250|UniProtKB:P69850}. Chromosome, centromere, kinetochore {ECO:0000250|UniProtKB:P69850}. Cytoplasm, cytoskeleton {ECO:0000305|PubMed:20624975}. Note=Associates with the mitotic spindle and the kinetochore (By similarity). In the cytoskeleton, localizes to cortical microtubules (Probable). {ECO:0000250|UniProtKB:P69850, ECO:0000305|PubMed:20624975}.
Interaction partners:
- DASH complex subunit dad2
- DASH complex subunit spc19
- DASH complex subunit dad4
- DASH complex subunit dam1
- DASH complex subunit ask1
- DASH complex subunit duo1
- DASH complex subunit dad1
- DASH complex subunit DAD5
- DASH complex subunit spc34
- Kinetochore protein ndc80
Sequence:
MSLEEKRALQNQILAEYANLASNLETLVKVLQDMVYNPSNNILDSLRDLEKEVGLVYTLYKASVWAILADLENNQEGKSGMFQDES
Protein: Erythrocyte membrane protein 1, PfEMP1 (Q8IAS4)
Organism: Plasmodium falciparum (isolate 3D7)
Interaction partners:
Sequence:
MAASTTYSSAPDAKHLLDMIGKDVHDQVKKEAKERSKGELTGQLSFASILGERAYTTDPCQLIKEKRENLIGDRGERHPCGNGSGKGEDVNRFSKERVDEYDNKKMKCSYGSNGKSEGACAPFRRLHVCDKNIQQIKTENITTHNLLLDVCLAAKYEGESLKGYHEQYEVQYPSSGSTMCTELARSFADIGDIVRGRDLYGGSKKEKEKRKQLDDKLKKIFENIKKENNEKLKSLTDDQIREYWWTANRETVWKAITCDEENKLGGYLYFRGTCGDNEKSVTQARDKCRCKKKDNTPDDQVPTYFDYVPQYLRWFEEWGEDFCRKKKKKVENAKKKCRGENNDKYCSRNGCDCEKTVRAKGKLRYGNRCTDCLYACYPYVHWIDKKKEEFDKQVKKYDEEIKKYTKVASGSSRKTRAATIKYEGYEKKFYEKLKESDYGKVDKFLEKLSKDKECEKVDDEEGGKINFAEKHDNNNNDEKEGTFYRSKYCQPCPYCGMKKKVPGKEWEKKNDNCTSGKLYEPKGDAEGTPIKILKSGENHDDIKQKIDDFCKTEDDESLYAAWKCYKHDEVQKVKREGEEEDDDEEDYKNVKAAGGLCILENQKKKEEGKEKKSEKEPEQFQKTFNDFFTYWVAHMLKDSIYWRTKKIKKCLENGKTMKCRNGCNNDCDCFESWVKQKKEKEWKPIKDHFGKQEDIKQETGMDPGDFLEYYLKLQFFEEVSEEKSQTGDEDANEKKRIKEMFDKKNQRTDKVASNEETIIDFMLEEELKDATKCKQDCEQRKPPGAGGGDVRSDTVPSRDPLTPGPTDGHEDSEDEEEEEEEEDEEHGPDDKEGTEENVEETETVEDQVEEEKAKDNTDGKGEEEEDNQGETTQITTQDGVNPCDIVDKLFKDDNTLTNACPTKYEKGREKFPNWKCIPSGDKTDTRERAGRSRRDTSGENTTTGSSGDTNGSVCVPSRRRKLYIQKLHDWAEKQVGTTQVDGKAAQGDAASKDPKVELRNAFIQSAAVETFFLWHKYKAENTKTQGGVGSLPLQTIDRNSANGDDEDNPEKQLKEGTIPHGFLRQMFYTLGDYRDILVGKYVDNGKDMEEVKSNIDSFFSNGEKPDDKKGVEQRKEWWKENAKHIWHGMICALTYDTNTASGDKHTLKQNKSLKEALWDEQKKKPKKTDNGSDYTYESVVLKEDDEGGGPRGQTSSPSSGEKTTLNNPKLSDFVLRPPYFRYLEEWGQNFCKERKKRLEKIEEECMEYGSRGKQKQKYSGDGEECEKVLVEDANIFSDLSSSCATPCRKYRKWIERKKYEFTEQYNAYGGQKNNYVNEQKDKCQTQSNNHDNGFCGTLEKDAAAFLNRLKNGPCKNNNDNGEEHKIDFNDTKKTFKHTEYCGPCSEFKVKCKNGACGDSNTQKKCNGITPIDGNEIAKMITSTEEVVMRVSDNSGNRFDGDLKEACNGKGIFKSIKENKWECRNVCGYVVCKPKEGNRETASGENKDQIITIRALVTHWVQNFLDDYKKIKHKISQCTKTDQGSTCQNKCQNKCKCVGEWIPKKREEWEKIRKRFLEQYKIENDEDFNVRSCLENFLVQIGAANAKNKVIKLSKFGNSCGCSADASAQKNDGHKDAIDCLLQKLQNKIDDCNKNQAQNSVETQPSDENPAQCQDTHPDDDLLLEEEQNPKNMRPGFCPEDDTTEQQEEEQDTCTPAGTVKEEEEEKEEKKDKGDEEEESPSGNSAPDPPESPSAGPNHNQHPPAIPTPATPAADPPQADEPFNRDILEKTIPFGVALALGSIAFLFLKKKTKSSVGNLFQILQIPKSDYDIPTLKSKNRYIPYKSGPYKGKTYIYMEGDSDEDKYAFMSDTTDITSSESEYEEMDINDIYVPGSPKYKTLIEVVLEPSGNNTTASGKNTPSDTQNDIQNDGIPSSKITDNEWNTLKHDFISNMLQNEPNTEPNILHDNLDNNTHPTMSRDNMEEKPFITSIHDRNLYTGEEYNYNVNMVNSMDDTKYVSNNVYSGIDLINDTLSGNKHIDIYDEVLKRKENELFGTNHVKQTSIHSVAKLTNSDPIHKQLDLLHTWLDRHRHMCEKWNNKEELLDKLKKEWNKENNTNSSLTHTSNIPSGENSIKNVLNTDVSIQIDMDNPKPKNEFTNMDTIPDKSTMDTILDDLEKYNEPYYYDFYKDDIYYDVNDDDKTSMDDIYVDHNNVTSNNMDVPTKMHIEMNIVNNKNEIFEEEYPISDIWNI
Protein: Cell wall protein TIR3 (TIP1-related protein 3) (P40552)
Organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Function: Component of the cell wall. Required for anaerobic growth.
Subcellular location: Secreted, cell wall {ECO:0000305|PubMed:10383953}. Membrane {ECO:0000305}; Lipid-anchor, GPI-anchor {ECO:0000305}.
Interaction partners:
Sequence:
MSFTKIAALLAVAAASTQLVSAEVGQYEIVEFDAILADVKANLEQYMSLAMNNPDFTLPSGVLDVYQHMTTATDDSYTSYFTEMDFAQITTAMVQVPWYSSRLEPEIIAALQSAGISITSLGQTVSESGSESATASSDASSASESSSAASSSASESSSAASSSASESSSAASSSASESSSAASSSASEAAKSSSSAKSSGSSAASSAASSASSKASSAASSSAKASSSAEKSTNSSSSATSKNAGAAMDMGFFSAGVGAAIAGAAAMLL