wanglab/gogpt-training-data huggingface dataset:
Protein: Delta-like protein (Q90656)
Organism: Gallus gallus (Chicken)
Subcellular location: Membrane {ECO:0000256|ARBA:ARBA00004479, ECO:0000256|RuleBase:RU280815}; Single-pass type I membrane protein {ECO:0000256|ARBA:ARBA00004479, ECO:0000256|RuleBase:RU280815}.
Interaction partners:
Sequence:
MGGRFLLTLALLSALLCRCQVDGSGVFELKLQEFVNKKGLLSNRNCCRGGGPGGAGQQQCDCKTFFRVCLKHYQASVSPEPPCTYGSAITPVLGANSFSVPDGAGGADPAFSNPIRFPFGFTWPGTFSLIIEALHTDSPDDLTTENPERLISRLATQRHLAVGEEWSQDLHSSGRTDLKYSYRFVCDEHYYGEGCSVFCRPRDDRFGHFTCGERGEKVCNPGWKGQYCTEPICLPGCDEQHGFCDKPGECKCRVGWQGRYCDECIRYPGCLHGTCQQPWQCNCQEGWGGLFCNQDLNYCTHHKPCKNGATCTNTGQGSYTCSCRPGYTGSSCEIEINECDANPCKNGGSCTDLENSYSCTCPPGFYGKNCELSAMTCADGPCFNGGRCTDNPDGGYSCRCPLGYSGFNCEKKIDYCSSSPCANGAQCVDLGNSYICQCQAGFTGRHCDDNVDDCASFPCVNGGTCQDGVNDYSCTCPPGYNGKNCSTPVSRCEHNPCHNGATCHERSNRYVCECARGYGGLNCQFLLPEPPQGPVIVDFTEKYTEGQNSQFPWIAVCAGIILVLMLLLGCAAIVVCVRLKVQKRHHQPEACRSETETMNNLANCQREKDISISVIGATQIKNTNKKVDFHSDNSDKNGYKVRYPSVDYNLVHELKNEDSVKEEHGKCEAKCETYDSEAEEKSAVQLKSSDTSERKRPDSVYSTSKDTKYQSVYVISEEKDECIIATEV
Protein: Oleate-activated transcription factor 1 (P39720)
Organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Function: The PIP2-OAF1 heterodimer acts as a transcriptional activator to induce the transcription of genes encoding proteins involved in fatty acid beta-oxidation, a response called oleic acid induction, when cells grow on fatty acids as sole carbon source. Recognizes and binds to the oleate response element (ORE) (or peroxisome box), two inverted CGG triplets spaced by 14 to 18 intervening nucleotides, in the promoter region of a number of genes (such as CTA1, FOX1 to FOX3, FAA2, PAS8, PAS10, etc.) for peroxisomal proteins. OAF1 acts as the sensor for oleate and inhibits PIP2 activity under non-inducing conditions. Activity is repressed by glucose.
Subcellular location: Nucleus.
Interaction partners:
- Peroxisome proliferation transcriptional regulator
Sequence:
MVENSTQKAPHAGNDDNSSTKPYSEAFFLGFNNPTPGLEAEHSSTSPAPENSETHNRKRNRILFVCQACRKSKTKCDREKPECGRCVKHGLKCVYDVSKQPAPRIPSKDAIISRLEKDMFYWKDKAMKLLTEREVNESGKRSASPINTNNASGDSPDTKKQHKMEPIYEQSGNGDINNGTRNDIEINLYRSHPTMIMSKVMKREVKPLSENYIIIQDCFLKILVTSVFLDTSKNTMIPALTANANITRAQPSVANNLLKLKEMLIRQCQTEDEKNRVNEFTDRILQNTNSNRNLKIGMLLSMLYNSVGYQYLEDHCPQGGEYSDLLRNLINECEAILPSYEIIERYKNHFYEYVYPSLPFIELEIFEESLSQTIFPDPNNPSKVQIRMGSTHLRAKVENLSLLLVILKLSYMSIRFLDHSTADSSFYLSKEIIDKYPIPNDFILLSQRCLASENWCACANENIISCLLYIWSFFAFSPEEGDFFLEHPTDVISSLIMMLSTSIGLHRDPSDFPQLISPSTSDKRTLNHRRILWLSIVTVCSFEASLKGRHSVSPISLMALFLNIKDPDSLTVYMNRVRGDLSDINNHKLLRIHKFTFKRAQLALLLSDLDNLTMTYYGSFHLHSIEFIREKIEIFVEENFPIVPLKSVAQDKSDLDDMNVISEMNILSSENSSSFHNRIMNKLLMLRTSMAVFLHFETLITKDKSIFPFYKKYFMVSCMDALSLINYFNKFFNGEYRHAISSLTSFNVTKFIQLALSSTIFSLLGIILRIGLAIHMLSSEVQKLSGTTDPRIKELNTKVEKFSTLQRDLESALEGIYCSASEHLRFTYFPVFKMLALFDVIVQRMRKGELWHGIFTMIQMEQMHSRIIKTLSITLGVKLDKKDRLLEELMACNHVANFSVEDIDELNRNIKKEIQISSGLKPPVNTIDLTNGEPFGNAVPTFTKTWSSSLDNLEKLSSAAAVGQSLDYNSGLRQGPLAGGGSKEQTPIAGMNNLNNSINATPIVDNSSGSQLPNGFDRGQANNTPFPGYFGGLDLFDYDFLFGNDFA
Protein: Protoporphyrinogen IX dehydrogenase [quinone] (EC 1.3.5.3) (Protoporphyrinogen IX dehydrogenase [menaquinone]) (Protoporphyrinogen IX dehydrogenase [ubiquinone]) (Protoporphyrinogen oxidase) (PPO) (P0ACB4)
Organism: Escherichia coli (strain K12)
Function: Catalyzes the 6-electron oxidation of protoporphyrinogen IX to form protoporphyrin IX; under anaerobic conditions uses menaquinone as an electron acceptor, under aerobic condition uses ubiquinone as an electron acceptor.
Subcellular location: Cell inner membrane {ECO:0000255|HAMAP-Rule:MF_00853, ECO:0000305|PubMed:20484676}; Peripheral membrane protein {ECO:0000255|HAMAP-Rule:MF_00853, ECO:0000305|PubMed:20484676}.
Interaction partners:
- Ferrochelatase
- Oxygen-dependent coproporphyrinogen-III oxidase
- Oxygen-independent coproporphyrinogen III oxidase
- Protein HemY
- Uroporphyrinogen-III synthase
- Uroporphyrinogen decarboxylase
- Trk system potassium uptake protein TrkH
- Delta-aminolevulinic acid dehydratase
- Glutamate-1-semialdehyde 2,1-aminomutase
- IMPACT family member YigZ
Sequence:
MKTLILFSTRDGQTREIASYLASELKELGIQADVANVHRIEEPQWENYDRVVIGASIRYGHYHSAFQEFVKKHATRLNSMPSAFYSVNLVARKPEKRTPQTNSYARKFLMNSQWRPDRCAVIAGALRYPRYRWYDRFMIKLIMKMSGGETDTRKEVVYTDWEQVANFAREIAHLTDKPTLK
Protein: AT2G33120 protein (Synaptobrevin-related protein 1) (B9DH97)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Subcellular location: Endomembrane system {ECO:0000256|ARBA:ARBA00046280}; Single-pass type IV membrane protein {ECO:0000256|ARBA:ARBA00046280}.
Interaction partners:
Sequence:
MAQQSLIYSFVARGTVILVEFTDFKGNFTSIAAQCLQKLPSSNNKFTYNCDGHTFNYLVENGFSESKYCSISYCVVAVDSAGRQIPMAFLERVKEDFNKRYGGGKAATAQANSLNKEFGSKLKEHMQYCMDHPDEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRTQGTQMRRKMWFQNMKIKLIVLAIIIALILIIILSICGGFNCGK
Protein: Neuroblastoma-amplified sequence (P90841)
Organism: Caenorhabditis elegans
Interaction partners:
- Centromere/kinetochore protein zw10 homolog
- t-SNARE coiled-coil homology domain-containing protein
- Vesicle transport protein USE1
- ATP-dependent RNA helicase DHX34
- Nonsense-mediated mRNA decay protein
- UPF3 domain-containing protein
- PIN domain-containing protein
- Nonsense-mediated mRNA decay factor SMG8
- Nonsense-mediated mRNA decay factor SMG9
- Vesicle transport protein SEC20
Sequence:
MAHMRGTNHEKEKHDDENSKILLKERYNLLKWLTNVEMRSPNVLIPVQIANYVESLPFCKLAVSPKCDRVAVMSYARQLDIYQISGEILTHESSVQVLEETSPEYCILQFSSSSTLILSSRSTPHIDVFDSMGAYLYDIPLELHEGIFDVNSAICGMQTFENYSSSSNDKFIEILYVLQYSGVFSAFKIGRLSKYVKMWTVQLDIGQTGSFTVLPQYNLLLVASHHKESTSLVPPAGLCSFRMMDMDPFVEPIRISTPDGGFFSRLPFSTSFMSYLPRMSLSFDSQLLVSVSTSGSLYLFEIPSLHVKFSFNFISGPRPVDACFVDSDEIAVIYDNGYLLRCSLEDLEEKMYSVKMRSKKEIDEEPELKDFYSEQTVMVSPAQREIFLLTADGDNSFLRKAAHKRVQLAGQLWFYTVWNSLKKLVGMAMGEPAEQLHFETHIAKFEFSLIHSPTRTLQELFDRTLKEHDYTRARELAETYDTIDIYVVLKSEWIDKCSKNKVTVEDVEDILKRIGDSEWAAEQCASADSDDFEVHKALIDLGLSLGESSVTWQIRLLHHWRMLEVCRIKGDVDIYMMARNGSCLDAALTFAHNGDIDSLTRIIESNMAVMKHHQKRILSAIPTCTSPTKYEILMPKREDGETEEQWELEEQNDGIYERLDKILMEHPDAESLIRSINVGNIPNEETFDFTSWVRETLPKIDFECGMTDICVNLLQIAYERGYEDLIHDLATWQPYAQYIRICSSVSESITSFQDSTMKSFTDRFSRLLDSELIKNAKDIVSLIEWKIKMTSSDSEESIEDRLRDAVTTLMKATNERTTKVLVAFRNELPSVVDDHVILEVLLNMTSTGADLMKSLGDLPVDKYVNVTSSLGSLMSRGVKMTFKSIFESMKEPDGARRVLIKLSRSGNCSNFDDWMSLRDDIYDMANGIYEDLVTTEEALEIFAGEILEEERIGSHPELMELVLTLNPKEDNSNPRKLSIAKSADVLLSKSDELMNEATQRGDPLLGRSRFFAVAARPISPKKSKEKLDWLDAIDAALELGCTMMPIAIKFCEHDSLLRDVVGLGSNYKQGKKILSFAKQLNIDTPIATALSYCALAALNANDAVYLSKYIGEVMKAKGVPVVHKLCMQIMNSSHVPTDMEDVYSCAVLNSSEENLLDTVDAIASSEKRLSESRRCREIRLDDIPVSEAVVGDPMYTPMRLYNARKEISGDVKQKITFYGKRNLWETNYGKREGFDVMKRLYAHESSTVALCFSLFEPAENVETGELSWTKNDKLRRYERGLRFFQDRVPLSDLVTAPASAIINEANKGDASITAIDRIEDYGCDRRRFIGDAEYRTETIIGLAGTENEQIFADALELAEKYEIDEWKLHMASLEYLLDPSYNVPIIDVKQIMKSRKHLSKLRTKLDEFHSRLRSMVLPSLETNEQFLSYISLFADAEPEKKLGDTIKKIISKMKNVEAIRLWTDAKYLSSTLNKIPDGNLRAIISSVLQFPKIGVKACEMSAEFLLEGDDTRPPSNPFTLFLLMRSNIEDFLELVANKKSRDDEIAYLDQAVILLENTPKVPPLLLDAIKMRSEKMHRATVTPEPATPSNGSSTGLSSYFSNTEDNSGMMKRRKN
Protein: Coiled-coil domain containing 110 (E7EUS2)
Organism: Homo sapiens (Human)
Interaction partners:
Sequence:
MSPEKQHREEDEVDSVLLSASKILNSSEGVKESGCSDTEYGCIAESENQIQPQSALKVLQQQLESFQALRMQTLQNVSMVQSEISEILNKSIIEVENPQFSSEKNLVFGTRIEKDLPTENQEENLSMEKSHHFEDSKTLHSVEEKLSGDSVNSLPQSVNVPSQIHSEDTLTLRTSTDNLSSNIIIHPSENSDILKNYNNFYRFLPTAPPNVMSQADTVILDKSKITVPFLKHGFCENLDDICHSIKQMKEELQKSHDGEVALTNELQTLQTDPDVHRNGKYDMSPIHQDKMNFIKEENLDGNLNEDIKSKRISELEALVKKLLPFRETVSKFHVHFCRKCKKLSKSEMHRGKKNEKNNKEIPITGKNITDLKFHSRVPRYTLSFLDQTKHEMKDKERQPFLVKQGSIISENEKTSKVNSVTEQCVAKIQYLQNYLKESVQIQKKVMELESENLNLKSKMKPLIFTTQSLIQKVETYEKQLKNLVEEKSTIQSKLSKTEEYSKECLKEFKKIISKYNVLQGQNKTLEEKNIQLSLEKQQMMEALDQLKSKEHKTQSDMAIVNNENNRMSIEMEAMKTNILLIQDEKEMLEKKTHQLLKEKSSLGNELKESQLEIIQLKEKERLAKTEQETLLQIIETVKDEKLNLETTLQESTAARQIMEREIENIQTYQSTAEENFLQEIKNAKSEASIYKNSLSEIGKECEMLSKMVMETKTDNQILKEELKKHSQENIKFENSISRLTEDKILLENYVRSIENERDTLEFEMRHLQREYLSLSDKICNQHNDPSKTTYISRREKFHFDNYTHEDTSSPQSRPLASDLKGIPSKLYHLLPSKIYK
Protein: Probable WRKY transcription factor 63 (WRKY DNA-binding protein 63) (Q9C6H5)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity).
Subcellular location: Nucleus {ECO:0000305}.
Interaction partners:
- Probable WRKY transcription factor 40
- F22C12.10
- Ethylene-responsive transcription factor ABI4
- Low-temperature-induced 78 kDa protein
- ABSCISIC ACID-INSENSITIVE 5-like protein 5
- Protein ABSCISIC ACID-INSENSITIVE 5
- NAC domain-containing protein 17
- ABSCISIC ACID-INSENSITIVE 5-like protein 7
Sequence:
MFSNIDHKAVAALLHGQGCANILKTVLDNCKVSSVSTEPLINTILDSFSLALSSVNSPNRQPHHESSSRDMAGLVPQRSSKKKICGVKGLEIYRDDSPNPRLDDGFTWRKYGQKTIKTSLYQRCYYRCAYAKDQNCYATKRVQMIQDSPPVYRTTYLGQHTCKAFGVHDNTYGSEMINFDQVVSESVMRQLATIGEQAVLMEDEANHIMNQEYDINDYLVDDEVFWGNEFPLFSSEDLMLF
Protein: Ribitol-5-phosphate transferase (A4QP37)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Interaction partners:
Sequence:
MRISFCQALLTGAIILNLLILYYVSRAQQQMMEKRREQGKGLKKASLPVSGLGAMGNLVGGSMVGGVKLGGLEGNMRGPRVTILVREFEDFENYVGDVARSFLRQRPELPFLAVAENSPYPPLALPEGARLLVMSPSPDQPPQTHRPEFNVRTEFSLLVPDGVELDHGRQVERLIRELEGEGGGPVRLVAAPVLTRSSVQCLHLRVNLREWTATYSPAASGSSGSVCTALQGDAVVLIRTEDLFNLSVPLGRPLMSSLFGQTSLRGWKVKLLEGPSFSASHRPLFSSAHNQWKADSRLKDATNHLMRSFGLKRLILPDGRDQWFGCSKETARCFGTVRDDTPEYLYIERWTPPCCLRALRETTKYVINILESSGVRYWLEGGSLLGAARHQDIIPWDYDVDLGIYLEDVPNCDYLKNLDSGSLVDANGYVWERAVEGDFYRVQYSETNHLHVDLWPFYPRNGVMTRDTWTEHKQDVEFSEHFLQPLVPMPFAGITTYGPNNHRAFLELKFGEGVIENPQYPNPAKKRLDRSRTFGS
Protein: TPD1 protein homolog 1 (TPD1-like protein 1) (AtTDL1) (Q1G3T1)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Interaction partners:
Sequence:
MRMEHIYKFQHWLFFIGLGVLLSLSLSVKANDFEGSNDRRSIALKARSFVSINENRTALSRKLLLSPDIGDGTNRIGQDCSKDDIVLFQGSTNPLPSGVPSYTVEIFNSCVSDCNIAEIHVSCGWFSSVRLVNPRVFRRLDYDDCLVNDGQPLGPGQSLSFQYANSFSYPLSVASVSCF
Protein: Candida glabrata strain CBS138 chromosome K complete sequence (Q6FME8)
Organism: Candida glabrata (strain ATCC 2001 / BCRC 20586 / JCM 3761 / NBRC 0622 / NRRL Y-65 / CBS 138) (Yeast) (Nakaseomyces glabratus)
Interaction partners:
Sequence:
MHPVPIAPNLHRPSTGSARLVVRTSKNWVLPPRPRPNRRNTIHSGANSSHTHTNNTHTNNAGNASSATTAVNSAATSAASTPAPPKRKRENSLPVNLKKVKKDYNRVENCLAFLKFDDEEDTTTTSTDIDDDLFSNTSPVSSTCTPLTSASLNLKSVPFNGASAVSGVGMLNLSAGKNGAQKKQQRAKSAQYSYKPSSKDDSKYGNESTLDGDLDLEMEMSMNLDDNINATSFTTATESKPEFFTINNITNATTSASPALNDPVTTDSSLSAKELEDFYNYIPPSLEELIDEQDAHSKNNNGLFRDSLMSKSYESMNLMMFNDPSNTARQQDDLIVDTDGDMFAFI
Protein: GDNF family receptor alpha (Q98TT9)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Subcellular location: Cell membrane {ECO:0000256|ARBA:ARBA00004609}; Lipid-anchor, GPI-anchor {ECO:0000256|ARBA:ARBA00004609}.
Interaction partners:
Sequence:
MFIAAIYIILPLLDVLLSAEESYFSSSNRLDCVKANELCLKEPGCSSKYRTMRQCVAGRESNFSMATGMEAKDECRLVLDALKQSPLYNCRCKRGMKKEKNCLRIYWGIYQHLQGNDLLEDSPYEPVNSRLSDIFRLAPIYSGEPALAKENNCLNAAKACNLNDTCKKYRSAYISPCTSRVSTAEVCNKRKCHKALRQFFDKVPPKHSYGMLYCSCPLGDQSACSERRRQTIVPACSYEDKERPNCLTLQVSCKTNYICRSRLADFFTNCQPEPLSLSGCLKENYADCLLSYSGLIGTVMTPNYLRSPKISVSPFCDCSSSGNSKEECDRFTEFFTDNACLRNAIQAFGNGTDVSVWHPMPPVQTTTSMTTPSQRARDKDRSPNAIEPATHINHLNPADNSLYQFCGNIQAQKKKTNNTIDVLCVDPQIDDPSSSNTISKNSSPRQMTLSGLSSQLLLLATSLHCIFTPVML
Protein: Diuretic hormone 44 receptor 2, isoform B (E2QCM9)
Organism: Drosophila melanogaster (Fruit fly)
Subcellular location: Cell membrane {ECO:0000256|ARBA:ARBA00004651}; Multi-pass membrane protein {ECO:0000256|ARBA:ARBA00004651}.
Interaction partners:
- Diuretic hormone receptor
- Diuretic hormone 44, isoform A
- G protein alpha s subunit subunit alpha)
- Guanine nucleotide-binding protein subunit beta-1
- G protein beta subunit 5
- Pyrokinin-1 receptor
Sequence:
MADDDLRALVDSLDDASQEDLAKVIANFSVDMLQRASALIGAQQGSSGGQLQNRTLQCQQQQQREEEQASLEALASGGKRILQCPSSFDSVLCWPRTNAGSLAVLPCFEEFKGVHYDTTDNATRFCFPNGTWDHYSDYDRCHQNSGSIPVVPDFSPNVELPAIIYAGGYFLSFATLVVALIIFLSFKDLRCLRNTIHANLFLTYITSALLWILTLFLQVITTESSQAGCITLVIMFQYFYLTNFFWMFVEGLYLYTLVVQTFSSDNISFIIYALIGWGCPAVCILVWSIAKAFAPHLENEHFNGLEIDCAWMRESHIDWIFKVPASLALLVNLVFLIRIMWVLITKLRSAHTLETRQYYKASKALLVLIPLFGITYLLVLTGPEQGISRNLFEAIRAFLISTQGFFVALFYCFLNSEVRQTLRHGFTRWRESRNIHRNSSIKNRSTEECVICLRPSPHTRLGSLQRYHSIDITDFV
Protein: Interferon regulatory factor 6 (B1AJU4)
Organism: Homo sapiens (Human)
Subcellular location: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
Interaction partners:
Sequence:
MALHPRRVRLKPWLVAQVDSGLYPGLIWLHRDSKRFQIPWKHATRHSPQQEEENTIFKAWAVETGKYQEGVDDPDPAKWKAQLRCALNKSREFNLMYDGTKEVPMNPVKIYQVCDIPQPQGSIINPGSTGSAPWDEKDNDVDEEDEEDELDQSQHHVPIQDTFPFLNINGSPMAPASVGNCSVGNCSPEAVWPKTEPLEMEVPQAPIQPFYSSPELWISSLPMTDLDIKFQYRGKEYGQTMTVSNPQGCRLFYGDLGPMPDQEELFGPVSLEQVKF
Protein: Ribosomal RNA processing protein 41B (EC 3.1.13.-) (D7SGF1)
Organism: Trypanosoma brucei brucei (strain 927/4 GUTat10.1)
Subcellular location: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
Interaction partners:
- RNasePH-like protein exosome-associated protein 1 Rrp42 homologue
- Exosome complex exonuclease RRP40
- Ribosomal RNA processing protein 4
- Exosome component CSL4
- Ribosomal RNA processing protein 45
- Ribosomal RNA-processing protein 43
- Ribosomal RNA processing protein 6
- ATP-dependent DEAD/H RNA helicase, putative
- Exosome complex exonuclease RRP44, putative
- Mitochondrial exoribonuclease DSS-1
Sequence:
MATISRRDGRTAREMRGKELRTSDLSQFDGSAWYSQGLTAVTVAINGPTAARQENYRRCTTCIHVNRAARIPQEGGTGRLIMMERRERERCEDGELKQFLTSLVEAIVCLDRFPRCVLEAHVTVLMDDGALFAVASNAIMCALLDAGVPCRSTIAAVSLIMCNPEASGNEGEPEIFLDPTAVEESTDEVRSYASATFVLTNTGGEAVLASRVQARPRSSAYSRPITPKDLSRMFALAAKAAETLFVFFRNCSMALE
Protein: Aminomethyltransferase (EC 2.1.2.10) (Glycine cleavage system T protein) (P9WN51)
Organism: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Function: The glycine cleavage system catalyzes the degradation of glycine.
Interaction partners:
- Glycine cleavage system H protein
- Probable glycine dehydrogenase
- Serine hydroxymethyltransferase 1
- Serine hydroxymethyltransferase 2
- Dihydrolipoyl dehydrogenase
- Methionine synthase
- Bifunctional purine biosynthesis protein PurH
- Bifunctional protein FolD
- Phosphoribosylglycinamide formyltransferase
- Methionyl-tRNA formyltransferase
Sequence:
MSDVPELIHGPLEDRHRELGASFAEFGGWLMPVSYAGTVSEHNATRTAVGLFDVSHLGKALVRGPGAAQFVNSALTNDLGRIGPGKAQYTLCCTESGGVIDDLIAYYVSDDEIFLVPNAANTAAVVGALQAAAPGGLSITNLHRSYAVLAVQGPCSTDVLTALGLPTEMDYMGYADASYSGVPVRVCRTGYTGEHGYELLPPWESAGVVFDALLAAVSAAGGEPAGLGARDTLRTEMGYPLHGHELSLDISPLQARCGWAVGWRKDAFFGRAALLAEKAAGPRRLLRGLRMVGRGVLRPGLAVLVGDETVGVTTSGTFSPTLQVGIGLALIDSDAGIEDGQQINVDVRGRAVECQVVCPPFVAVKTR
Protein: Probable S-adenosylmethionine synthase 4 (AdoMet synthase 4) (EC 2.5.1.6) (Methionine adenosyltransferase 4) (MAT 4) (P50306)
Organism: Caenorhabditis elegans
Function: Catalyzes the formation of S-adenosylmethionine from methionine and ATP. The reaction comprises two steps that are both catalyzed by the same enzyme: formation of S-adenosylmethionine (AdoMet) and triphosphate, and subsequent hydrolysis of the triphosphate.
Interaction partners:
- Hcy-binding domain-containing protein
- Probable methionine synthase
- Tyrosine aminotransferase
- S-adenosylmethionine decarboxylase proenzyme
- Probable methylenetetrahydrofolate reductase
- Serine hydroxymethyltransferase
- PABS domain-containing protein
- Trifunctional purine biosynthetic protein adenosine-3
- U6 small nuclear RNA
- Alanine--glyoxylate aminotransferase
Sequence:
MPQHKFLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVACETVTKTGMIMLCGEITSKAVVDYQVLVRNVIKKIGYDDSSKGFDYKTCNVLVALEQQSPEIAAGVHVDKDSDDVGAGDQGIMFGYATDETEEAMPLTLLLSHKLNRKLHELRRSGELEWVRPDSKTQVTIEYASEGGACVPLRVHTVVISTQHSPDISLDDLRKELIEKVIKAVIPANLIDDKTIYHLNPCGSFIIGGPMGDAGLTGRKIIVDTYGGWGAHGGGAFSGKDPTKVDRSAAYAARWVAKSLVKAGLCRRCLVQVSYAIGVAKPLSVMVFSFGTSALSEEDLLTIVNDNFDLRPGKIIKNLDLKRPIYEPTAENGHFGHNNFPWEQPRNLKISADMLAKSQGPAQPDVIGIAH
Protein: Endoplasmic oxidoreductin 1, putative, expressed (Os03g0733800 protein) (Q6AVU2)
Organism: Oryza sativa subsp. japonica (Rice)
Subcellular location: Endoplasmic reticulum membrane {ECO:0000256|ARBA:ARBA00004367}; Peripheral membrane protein {ECO:0000256|ARBA:ARBA00004367}; Lumenal side {ECO:0000256|ARBA:ARBA00004367}.
Interaction partners:
- Protein disulfide isomerase-like 1-1
- Protein disulfide isomerase-like 1-4
- Protein disulfide isomerase-like 2-3
- Protein disulfide isomerase-like 1-5
- Protein disulfide isomerase-like 5-3
- Protein disulfide isomerase-like 5-2
- Protein disulfide isomerase-like 1-2
- Protein disulfide isomerase-like 2-2
- Protein disulfide isomerase-like 2-1
- Protein disulfide isomerase-like 1-3
Sequence:
MPPQEPAPAANGAAPAPAPAAAAAAAGGKRRKRGRWAAAAGVGALLVALLAVAVSSRSFPAASSSSRGGDCGCPGTRKYTGMVEDCCCDYETVDAINEEVLHPILQELVTLPFFRYFKVKLWCDCPFWPDDGMCRLRDCSVCECPENEFPEPFKKPYSGLSPDSMICQEGKPQATVDRTLDAKVFKGWIETDNPWTYDDETDNAEMTYVNLQLNPERYTGYTGDSARRIWDSVYKENCPKYPSEEMCQEKKALYKLISGLHSSISVHIAYDYLLDESANLWGHNLPLLYDRVLKYPERVQNLYFTYLFVLRAVTKAADYLEQAEYNTGNPEEDLKTQSLVKQLLYNPKLRSACPLPFDEAKLWQGENGPELKQEIQKQFRNISAIMDCVGCEKCRLWGKLQVLGLGTALKILFSVDGENHLNQSLQLQRNEVIALVNLLNRLSESVNFVHEKGPSIEDVIKQQSSSTVKPVFPI
Protein: beta-N-acetylhexosaminidase (EC 3.2.1.52) (G5EEC8)
Organism: Caenorhabditis elegans
Interaction partners:
- Beta-1,4-galactosyltransferase galt-1
- Alpha-
- Beta-hexosaminidase A
- Alpha-
- Alpha-
Sequence:
MLLRRTICILACIVQFATCGYQRSIVHFDMKGAPPKVAYFKQLLTTISGLGATGVLLEWEDMFPYQGGLSRVVNKNAYTEEEVISVLEHAQQLQLEVIPLVQTLAHMEWILKTEEYSVLREDERYPMVACIGNPESLDIILDSVNQLMRIHSNFNTGYVHIGADEAFQVGICDADREILPVKYDNNKLRMIFDHLRMVSLNITEEYPSTKVLMWYDELKSAPLELIKEYNLDNLVIPVVWKYTANLDNDLPSEMWKNMSYSFKEVWGGSAFKGADGASRYWNRLKPYILNNKEWYLQNEKYKPQFTTFDSIIITGWQRYDHFASLCELWPTSMVSLALNLIVLTKFHIDKESAEQVIQALNCPQTTTLDQLVAGSDRCRFPGYRVRDSIRDYVQLKTFFENSTWVHNRENGWLQSSHMRISASNPYYIDAIGKAYERTLKKLDTVSNSLSTSFSEVFYPDVIEEFKTDYFQPFYEDLQKRKESVDNIDTKRFYVPRPWFRR
Protein: Lipopolysaccharide-binding protein (LBP) (P17454)
Organism: Oryctolagus cuniculus (Rabbit)
Function: Plays a role in the innate immune response. Binds to the lipid A moiety of bacterial lipopolysaccharides (LPS), a glycolipid present in the outer membrane of all Gram-negative bacteria. Acts as an affinity enhancer for CD14, facilitating its association with LPS (By similarity). Promotes the release of cytokines in response to bacterial lipopolysaccharide.
Subcellular location: Secreted {ECO:0000269|PubMed:2402637, ECO:0000269|PubMed:2427635}.
Interaction partners:
- Toll-like receptor 4
Sequence:
MGTWARALLGSTLLSLLLAAAPGALGTNPGLITRITDKGLEYAAREGLLALQRKLLEVTLPDSDGDFRIKHFGRAQYKFYSLKIPRFELLRGTLRPLPGQGLSLDISDAYIHVRGSWKVRKAFLRLKNSFDLYVKGLTISVHLVLGSESSGRPTVTTSSCSSDIQNVELDIEGDLEELLNLLQSQIDARLREVLESKICRQIEEAVTAHLQPYLQTLPVTTQIDSFAGIDYSLMEAPRATAGMLDVMFKGEIFPLDHRSPVDFLAPAMNLPEAHSRMVYFSISDYVFNTASLAYHKSGYWNFSITDAMVPADLNIRRTTKSFRPFVPLLANLYPNMNLELQGTVNSEQLVNLSTENLLEEPEMDIEALVVLPSSAREPVFRLGVATNVSATLTLNTRKITGFLKPGRLQVELKESKVGGFNVELLEALLNYYILNNLYPKVNEKLAHRFPLPLLRHIQLYDLLLQTHENFLLVGANIQYRRV
Protein: Sentrin-specific protease (EC 3.4.22.-) (SUMO protease) (SuPr) (Ubiquitin-like protease) (Q09353)
Organism: Caenorhabditis elegans
Function: Protease that deconjugates smo-1 from targeted proteins and may catalyze the processing of smo-1 to its mature form.
Subcellular location: Nucleus envelope {ECO:0000269|PubMed:25475837}.
Interaction partners:
- Small ubiquitin-related modifier
- Ubiquitin-like protease 4
- E3 SUMO-protein ligase gei-17
- SUMO-conjugating enzyme UBC9
- SUMO-activating enzyme subunit uba-2
- Ran GTPase-activating protein 2
- Ubiquitin-like protease family profile domain-containing protein
- SUMO-activating enzyme subunit aos-1
- Importin N-terminal domain-containing protein
- Cilia- and flagella-associated protein 157
Sequence:
MSRRSDLSDKDSQSRKRHWLTDQAVTNEEKEQSPTKRTRKTKSQGLGGLFNTFFGMFVSSNSGEKEKTEVSGEVQVQEDDEIIVEGTTRRVAENKKYMIFLNEDAPVRANAGSEENEVIIEKHVQKNVEIRNDEEKQEVQGDLVLTLSSSPKSPKNLEKSFEVQQDDEEPDVLFEKVVKTPNKQLQEARRFQNELIFLNDNPDTPDDVSVISDSRSKEFISPTPDDSVSRPITPSLSSLSNYTSNNVRDYWRRNSAKKPEVLRRVPVRHQFKHSTSVRKMNTIIDLKKIKNHLSSRDRLLQGVVASGQYEAKAISGIVEKKPKKMQRTSSTDILARAKNKIAELGGSRSNTPSLLSREPSIIIDSEESTSSSYRQHARSNSSESDSYRKLNDILSQINSLGIGSAYRGPQRYQNSYQLSKQKEDKLLEEARIREGHRSQTRGDRLEDVRKRLELQGIAIRPKVEKKKVDDFMALPDAADALVERAWSGGNPNEQFVDAFSIQICKKDLATLSGLHWLNDEIINFYLQLICDRSNGDSKYPKIYAFNTFFYSNIVSKGYASVKRWTRKVDIFAFDIVLVPVHLGMHWCMAVIDMGEKKIEFYDSLYDGNTAVLPALRGYLEAESLDKKKTAMNFSGWTIQQMTDIPRQQNGSDCGVFSCQFGEWASRRTTPRFTQKNMPYYRKRMVYEIVSKKLLATI
Protein: Neurogranin (Ng) (Protein kinase C substrate 7.5 kDa protein) (RC3) [Cleaved into: NEUG(55-78)] (Q04940)
Organism: Rattus norvegicus (Rat)
Function: Regulates the affinity of calmodulin for calcium. Involved in synaptic plasticity and spatial learning (By similarity).
Subcellular location: Cytoplasm {ECO:0000269|PubMed:1528865}. Synapse {ECO:0000269|PubMed:1528865}. Cell projection, dendritic spine {ECO:0000269|PubMed:1528865}. Note=Restricted to dendritic spines of a subset of neurons.
Interaction partners:
- Calmodulin-1
- Calmodulin-like protein 3
- Calmodulin-like protein 4
- Uncharacterized protein.
Sequence:
MDCCTESACSKPDDDILDIPLDDPGANAAAAKIQASFRGHMARKKIKSGECGRKGPGPGGPGGAGGARGGAGGGPSGD
Protein: ADP-ribosylation factor-like protein 2-binding protein (ARF-like 2-binding protein) (ARL2-binding protein) (Binder of ARF2 protein 1) (Q9Y2Y0)
Organism: Homo sapiens (Human)
Function: Together with ARL2, plays a role in the nuclear translocation, retention and transcriptional activity of STAT3. May play a role as an effector of ARL2.
Subcellular location: Cytoplasm. Mitochondrion intermembrane space. Cytoplasm, cytoskeleton, microtubule organizing center, centrosome. Nucleus. Cytoplasm, cytoskeleton, spindle. Cytoplasm, cytoskeleton, cilium basal body. Note=The complex formed with ARL2BP, ARL2 and SLC25A4 is expressed in mitochondria (By similarity). Detected in the midbody matrix. Not detected in the Golgi, nucleus and on the mitotic spindle. Centrosome-associated throughout the cell cycle. Not detected to interphase microtubules. In retina photoreceptor cells, localized in the distal connecting cilia, basal body, ciliary-associated centriole, and ciliary rootlet. Interaction with ARL2 may be required for cilia basal body localization. {ECO:0000250}.
Interaction partners:
- ADP-ribosylation factor-like protein 2
- Cilia- and flagella-associated protein 20
- ADP-ribosylation factor-like protein 3
Sequence:
MDALEGESFALSFSSASDAEFDAVVGYLEDIIMDDEFQLLQRNFMDKYYLEFEDTEENKLIYTPIFNEYISLVEKYIEEQLLQRIPEFNMAAFTTTLQHHKDEVAGDIFDMLLTFTDFLAFKEMFLDYRAEKEGRGLDLSSGLVVTSLCKSSSLPASQNNLRH
Protein: AT1G25275 protein (Thionin-like protein) (B9DG55)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Interaction partners:
- Transmembrane protein
- AT4g05070 protein
- Succinate dehydrogenase assembly factor 4
- At3g13845
- Protein CYSTEINE-RICH TRANSMEMBRANE MODULE 6
- AT4g21620/F17L22_80
- At1g67860/T23K23_29
- At1g67862/At1g67862
- Small polypeptide DEVIL 6
- Protein RALF-like 24
Sequence:
MMKKQVTIVAALLIMMALCSSLNMVAEAQLGPGDCYDGCSTACVQRDPRKTSRCDRKCSIRCGPGKHYETGYVPTDAARASGSGV
Protein: ORF 56 (P88944)
Organism: Human herpesvirus 8 type M
Interaction partners:
Sequence:
METTYRREALTVRVIFCTSGDSAETIADVLTGAPTSASFFSVLHDLFYSQILAPRVTLKLCLPARRPGNGTRCSPVLVLRTDASVASGFLGGRPLEASDIKYMLLSDQTAGLFKPLLEIIGGARAPPNQDACTFQSQVAWLRTKFVTALRKLYKMTPSPYWMLSAFGAQEAQFVLTSSFYFFEHTVVCTTETVSHLSRLFSPQQGQTLVSVTSHEELGQLYGTSPFRRRVPAFVAYVKEKLARDSLETEAIDRTIDQIRGKLMLSNQDLVHFIYISFYQCLNKRAFLRYSRQTSSSSALRELGEDPQLCGALHGEFRDHVQSYYHKKTYLSTYIDIRYVGGVLPDGYFGGSLVGERCVYWCGQSKDTASLLATISQQVPHLRLQNEFAGMLDVAALRGSDDGQFKEGLFSHSQALPLYRCEFLGKQFFTMLQEDGLERYWEQSVIFPGDQDWDMLSDKDLTYRIFYHDLSLSLPTLKEQLLVSRHEYFNPRLPVYRWVLDFDLPVCRDIDRTFEEVHSLCCSLREAILDIIQLLGPVDPRTHPVYFFKSACPPDEWRGEDVASTSFCRCHDKLGMRIIVPFPEGVCVVGSEPMVALTGILNRTIKLDPELVHRFPSIQKKGGPFDCGIYGRGRSVRLPHCYKVGLVGELCRLLKILVCHPAPNGKAQYVRRAFTLRELLHHSPGHSAGHVGRIIYSIMDRNENFLENKTISYLPAKIPHIFQRIETLSGRSIEDWLHSAVWDKAYDTICKFFPDEKAQQFSHVAFTQQGENIIQLRPRQGRHFLCINHNHKNKSKTVRVFLTLHSIRVSEVTVTLMSQCFASKCNNNVPTAHFSFVVPVGLAS