wanglab/gogpt-training-data huggingface dataset:
Protein: Plant UBX domain-containing protein 3 (PUX3) (CDC48-interacting UBX-domain protein 3) (Q9SUG6)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Interaction partners:
- Plant UBX domain-containing protein 11
- Cell division control protein 48 homolog A
- Plant UBX domain-containing protein 2
- F13M7.16 protein
- Plant UBX domain-containing protein 1
- Plant UBX domain-containing protein 5
- Plant UBX domain-containing protein 4
- Cell division control protein 48 homolog D
- Plant UBX domain-containing protein 6
- AT3g18860/MCB22_3
Sequence:
MSSKDKKLSKPTSGRTGGIRTLSDLNRRSEPDSDSDSDGPQEYFTGGEKSGMLVQDPTKEPKHDDVDEIFNQARQLGAVEGPLEHPSSSRSFTGTGRLLSGESVPTALQQPEPVIHNIIFWSNGFTVDDGPLRKLDDPENASFLDSIRKSECPKELEPVDKRAPVHVNLMRRDEKCPEKEKLKVSFQGVGRTLGGASSSTASSQSNLTDVAAVQSPLQSLVVDETLPSTSIQLRLADGTRMVAKFNNHHTVNDIRGFIEFSRPGNPNNYTLQVMGFPPKPLTDPSQTIEQAGLASSVVIQKF
Protein: Probable isocitrate dehydrogenase [NAD] gamma 2, mitochondrial (Isocitric dehydrogenase subunit gamma 2) (NAD(+)-specific ICDH subunit gamma 2) (Q8BPC6)
Organism: Mus musculus (Mouse)
Function: Regulatory subunit which plays a role in the allosteric regulation of the enzyme catalyzing the decarboxylation of isocitrate (ICT) into alpha-ketoglutarate. The heterodimer composed of the alpha (IDH3A) and beta (IDH3B) subunits and the heterodimer composed of the alpha (IDH3A) and gamma (IDH3G) subunits, have considerable basal activity but the full activity of the heterotetramer (containing two subunits of IDH3A, one of IDH3B and one of IDH3G) requires the assembly and cooperative function of both heterodimers.
Subcellular location: Mitochondrion {ECO:0000269|PubMed:18614015}.
Interaction partners:
- Isocitrate dehydrogenase subunit alpha, mitochondrial
- Isocitrate dehydrogenase subunit
- Isocitrate dehydrogenase, mitochondrial
- Isocitrate dehydrogenase cytoplasmic
- Aconitate hydratase, mitochondrial
- Cytoplasmic aconitate hydratase
- 2-oxoglutarate dehydrogenase complex component E1
- 2-oxoglutarate dehydrogenase-like, mitochondrial
- Isocitrate dehydrogenase subunit gamma 1, mitochondrial
- Argininosuccinate lyase
Sequence:
MLAVTSCSMKTVLQYAVFLGHSREVVCELVTSFRSFCSHCAVPPSPKYGGRHTVAMIPGDGIGPELMVHVKKIFRSNCVPVDFEEVWVTSTSNEEEINNALMAIRRNRVALKGNIATNHNLPARYKSHNTKFRTILDLYASVVHFKTFPGVMTRHKDIDILVVRENTEGEYTNLEHESVKGVVESLKIVTKTKSVRIADYAFKLAQKMGRKKVTVVHKANIMKLGDGLFLQCCKDVAAHYPQITLESMIIDNTTMQLVSKPQQFDVMVMPNLYGNIINSICTGLVGGSGIVPGANYGDSYAIFEMGSKEIGKDLAHRNIANPVAMLLTSCIMLDYLDLQPYATHIRSAVMASLQNKAVCTPDIGGQGNTASTVEYILHHMKEQTSGCHPNFFLQFT
Protein: H-2 class I histocompatibility antigen, Q7 alpha chain (QA-2 antigen) (P14429)
Organism: Mus musculus (Mouse)
Function: Involved in the presentation of foreign antigens to the immune system.
Subcellular location: Membrane; Single-pass type I membrane protein.
Interaction partners:
- Beta-2-microglobulin
- H-2 class I histocompatibility antigen, Q8 alpha chain
- Natural killer cells antigen CD94
- H-2 class I histocompatibility antigen, D-B alpha chain
- H-2 class II histocompatibility antigen, A-B alpha chain
- Killer cell lectin-like receptor subfamily C, member 1
- H-2 class II histocompatibility antigen, E-B beta chain
- H-2 class I histocompatibility antigen, K-B alpha chain
- Class II histocompatibility antigen, M alpha chain
- T-cell surface glycoprotein CD8 alpha chain
Sequence:
MALTMLLLLVAAALTLIETRAGQHSLQYFHTAVSRPGLGEPWFISVGYVDDTQFVRFDSDAENPRMEPRARWMEQEGPEYWERETQIAKGHEQSFRGSLRTAQSYYNQSKGGSHTLQWMYGCDMGSDGRLLRGYLQFAYEGRDYIALNEDLKTWTAVDMAAQITRRKWEQAGIAEKDQAYLEGTCMQSLRRYLQLGKETLLRTDPPKAHVTHHPRSYGAVTLRCWALGFYPADITLTWQLNGEELTQDMELVETRPAGDGTFQKWASVVVPLGKEQNYTCHVNHEGLPEPLTLRWGRWEPPPYTVSNMATIAVVVDLGAVAIIGAVVAFVMNRR
Protein: Bud neck protein 5 (P53890)
Organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Function: Required for normal septin function and cytokinesis.
Subcellular location: Cytoplasm {ECO:0000269|PubMed:14562095}. Bud neck {ECO:0000269|PubMed:25971666}. Note=Arrives at the bud site approximately coincident with bud emergence and dissociates from the septin scaffold before cytokinesis.
Interaction partners:
- Cell division control protein 11
- Myosin-1
- Cell division control protein 12
- Seventh homolog of septin 1
- Cell division control protein 3
- Cell division control protein 10
- Myosin light chain 1
- Cytokinesis protein 2
- Ras GTPase-activating-like protein IQG1
- Serine/threonine-protein kinase ELM1
Sequence:
MGLDQDKIKKRLSQIEIDINQMNQMIDENLQLVEPAEDEAVEDNVKDTGVVDAVKVAETALFSGNDGADSNPGDSAQVEEHKTAQVHIPTENEANKSTDDPSQLSVTQPFIAKEQITHTAIAIGDSYNSFVANSAGNEKAKDSCTENKEDGTVNIDQNRGEADVEIIENNDDEWEDEKSDVEEGRVDKGTEENSEIESFKSPMPQNNTLGGENKLDAELVLDKFSSANKDLDIQPQTIVVGGDNEYNHESSRLADQTPHDDNSENCPNRSGGSTPLDSQTKIFIPKKNSKEDGTNINHFNSDGDGQKKMANFETRRPTNPFRVISVSSNSNSRNGSRKSSLNKYDSPVSSPITSASELGSIAKLEKRHDYLSMKCIKLQKEIDYLNKMNAQGSLSMEDGKRLHRAVVKLQEYLDKKTKEKYEVGVLLSRHLRKQIDRGENGQFWIGTK
Protein: Always early (Q2PNP3)
Organism: Drosophila melanogaster (Fruit fly)
Subcellular location: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
Interaction partners:
Sequence:
MSRHQLKKPRKMVAAWQNDELFIKRPNFAPRIRISEKPEIQGRIKPGVASKRTENFTKKPSNISVDVSEDEKAKEKEKEQDPYSNDFILGKRLYNFLKYLSSHRWIWCEFVDSFLDKPTLTMGYDMKRFIAEYCPLLHSCFMPRRGWQLVRRNMGKARRFSAAFIELEREELECQRRIVRQLQQHKFNPKENVGYLDQIPKRVPLPLAKDATVSSFLHGNSFEGIVNGTVMGYDPQDYTYLVRFNRNDNAVVLSLPDSQLYSDEETAAVPLSIIMRGNKSSSVISESAKTEKFGNKRYTKELLESMLRVGKLQDVKHKILMDLARMNEDFETFKEIGSSSSRRDAKVTPQRENLQRRYSASMITLHRVNADILEPLRILHDYLVEYQKQDEEEESKRGRPASEVYQKCRMQAEQDLKTAADEKFLKIESDRTQEFVRNLHTILYLNGKLGRENSSNLETIIADLVTHMVDNIQPSLGRKLKDGVDSLEPLRQQVVQIFKDVKKPERFQITQQAPMQTEDGIYNFVVEAQPDTPS
Protein: Myb domain-containing protein (Q54T71)
Organism: Dictyostelium discoideum (Social amoeba)
Interaction partners:
- Transmembrane protein
- Basic-leucine zipper transcription factor B
- Extracellular matrix protein A
- Prestalk protein
- Des-methyl DIF-1 methyltransferase A
- BTG family protein
Sequence:
MESKVGYKPMVDFNNNNNNNNNNNNNNMKPEDANAAIDNSNANANSNVNGYYSSPSSNYSHSPRSPTSSTVVAQSANEDHQQPQPPQQQQPPQQHQSSQPMQESKPIQTHIQHLTANSTSPQQQQQQQQQPQQQQQQQQQQQQQQQQQQQQQQHHQQSHNNNFNNNNNNNNNSNNNNNNNQPLSPQKIEIIRSDTTQNSHYTKSSSPPTQVTSPSISSATTPTNMSPPHSDLNNNQNNNQNNNNNNNINVKSSRDEGSSSSSKRRESENGSRGGESGSTSSRDRERDRDRERERERERDRERERERGRDRSDRNDRGDRNDHNNNNNNNNNNNINNNDDRYNNSNNNNSNNNFNNNNNNNNINNNNNNNNSGSGNSGGSVSNNDRDRSINDRRSDGRRNVGGNGSPAGSSPSLQSMNSIISSNKKDNNNNNNNNNNINNINNSNSNNNYNNSNNNNNSNSQQPQQQQQQQQQQQQQQQFQQQQQYIRELQQSLDSQTKNNQVLSDKIRDLDDTLNKKTVLLSKYRKALLKFFEDREVEGETGFDNSSERSLSRSPSRERSRSHSRSRSRSRSRSHSRSISRSRSSSPMNYGNNGNNNNGYQSSNNSNKSSSYNSPEKGELKRKSGGDDGKDVKRRKTGSRRNTLWTTEDDEKFAEAYNKYGKSWKTIHSHLPDKTREQVQSHGQYLIRIGKLQDLHKDGRRTRHIKPDLGLGNNNNNSNSNSNNNNNNNNNNSGGGNNHHHSSHHNHHSPSHHNDNKHHHHHNNNNNNNNNNNNHNNNLNILNNLTNNNHNNNNNYDYDSPQSQLDSPRDDIDDEILI
Protein: Proteasome 20S subunit alpha 1 (F5GX11)
Organism: Homo sapiens (Human)
Interaction partners:
Sequence:
MEAVKQGSATVGLKSKTHAVLVALKRAQSELAAHQKKILHVDNHIGISIAGLTADARLLCNFMRQECLDSRFVFDRPLPVSRLVSLIGSKTQIPTQRYGRRPYGVGLLIAGYDDMGPHIFQTCPSANYFDCRAMSIGARSQSARTYLERHMSEFMECNLNELVKHGLRALRETLPAEQDLTTKNVSIGIVGKDLEFTIYDDDDVSPFLEGLEERPQRKAQPAQPADEPAEKADEPMEH
Protein: Beta-insect toxin AaBTxL1 (Neurotoxin AaBTX-L1) (Peptide AaF1CA25) (Q4LCS8)
Organism: Androctonus australis (Sahara scorpion)
Function: Shifts the voltage of activation of para/tipE voltage-dependent sodium channels (Nav) toward more negative potentials.
Subcellular location: Secreted {ECO:0000269|PubMed:15963953}.
Interaction partners:
Sequence:
MMKLVLFSVIVILFSLIGSIHGADVPGNYPLDRSGKKYPCTITWKKNPSCIQICKKHGVKYGYCFDFQCWCEIFGRLKTFKI
Protein: Broad-complex core protein isoforms 1/2/3/4/5 (Q01295)
Organism: Drosophila melanogaster (Fruit fly)
Function: Broad-complex proteins are required for puffing and transcription of salivary gland late genes during metamorphosis.
Subcellular location: Nucleus.
Interaction partners:
Sequence:
MDDTQHFCLRWNNYQSSITSAFENLRDDEAFVDVTLACEGRSIKAHRVVLSACSPYFRELLKSTPCKHPVILLQDVNFMDLHALVEFIYHGEVNVHQKSLQSFLKTAEVLRVSGLTQQQAEDTHSHLAQIQNLANSGGRTPLNTHTQSLPHPHHGSLHDDGGSSTLFSRQGAGSPPPTAVPSLPSHINNQLLKRMAMMHRSSAAAAAEETSHAFKRLRGSDNSLPLSGAVGSGSNNNSPDLPPLHARSASPQQTPADFSTIKHHNNNNTPPLKEEKRNGPTGNGNSGNGNGNGNGASNGNGISISDKLGSLTPSPLARAGADDVKSEPMDMVCSNNNANANDEHSNDSTGEHDANRSSSGDGGKGSLSSGNDEEIGDGLASHHAAPQFIMSPAENKMFHAAAFNFPNIDPSALLGLNTQLQQSGDLAVSPQGKLTTNATTTTTTINNSITNNNNNNNNNNYDYSLPTKNSNSQKTPSPTTTTLTTPTTTTPTRPTAITSASGICGLNLSTFAANGSSSGGSNGGLSMTALLPQQQQQQQQQHQMSQQQQQQQQQQQQQGNSSSGQQQQPNGILACSTPKANTPTTTQQQMYAAVMAAAASASASTSGSANSSLNNSNSTLNTSGGLNNSASGGDDFRCNPCNKNLSSLTRLKRHIQNVHMRPTKEPVCNICKRVYSSLNSLRNHKSIYHRNLKQPKQEPGVGATQAAANSFYHQQHQQQQLNHHSSS
Protein: non-specific serine/threonine protein kinase (EC 2.7.11.1) (Q5QPD4)
Organism: Homo sapiens (Human)
Subcellular location: Cytoplasm, cytoskeleton, spindle {ECO:0000256|ARBA:ARBA00004186}.
Interaction partners:
Sequence:
MDRSKENCISGPVKATAPVGGPKRVLVTQQFPCQNPLPVNSGQAQRVLCPSNSSQRIPLQAQKLVSSHKPVQNQKQKQLQATSVPHPVSRPLNNTQKSKQPLPSAPENNPEEELASKQKNEESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELK
Protein: Lymphocyte antigen 6H (Ly-6H) (O94772)
Organism: Homo sapiens (Human)
Function: Believed to act as a modulator of nicotinic acetylcholine receptors (nAChRs) activity. In vitro inhibits alpha-3:beta-4-containing nAChRs maximum response. May play a role in the intracellular trafficking of alpha-7-containing nAChRs and may inhibit their expression at the cell surface. Seems to inhibit alpha-7/CHRNA7 signaling in hippocampal neurons.
Subcellular location: Cell membrane {ECO:0000250}; Lipid-anchor, GPI-anchor {ECO:0000250}.
Interaction partners:
- Ly-6/neurotoxin-like protein 1
- Lymphocyte antigen 6K
- Secreted Ly-6/uPAR-related protein 1
- Ly6/PLAUR domain-containing protein 2
- Ly6/PLAUR domain-containing protein 6
Sequence:
MLPAAMKGLGLALLAVLLCSAPAHGLWCQDCTLTTNSSHCTPKQCQPSDTVCASVRITDPSSSRKDHSVNKMCASSCDFVKRHFFSDYLMGFINSGILKVDVDCCEKDLCNGAAGAGHSPWALAGGLLLSLGPALLWAGP
Protein: Sulfur carrier protein CysO (9.5 kDa culture filtrate antigen cfp10A) (P9WP33)
Organism: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Function: In its thiocarboxylated form (CysO-COSH), is the sulfur donor in the CysM-dependent cysteine biosynthetic pathway. May be of particular importance for cysteine biosynthesis in the persistent phase of M.tuberculosis.
Interaction partners:
- O-phosphoserine sulfhydrylase
- Probable adenylyltransferase/sulfurtransferase MoeZ
- Probable adenylyltransferase/sulfurtransferase MoeZ
- CysO-cysteine peptidase
- Molybdopterin synthase catalytic subunit 1
- Molybdopterin synthase catalytic subunit 1
- Molybdopterin synthase catalytic subunit 2
- Thiazole synthase
- Molybdopterin synthase sulfur carrier subunit
- O-acetylserine sulfhydrylase
Sequence:
MNVTVSIPTILRPHTGGQKSVSASGDTLGAVISDLEANYSGISERLMDPSSPGKLHRFVNIYVNDEDVRFSGGLATAIADGDSVTILPAVAGG
Protein: Exocyst subunit Exo70 family protein (Q9C9E5)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Interaction partners:
- Exocyst complex component SEC8
- Exocyst complex component SEC6
- Exocyst complex component EXO84C
- Exocyst complex component SEC3B
- Exocyst complex component SEC10a
- Exocyst complex component EXO84A
- Exocyst complex component SEC5B
- Exocyst complex component SEC5A
- Exocyst complex component SEC3A
- Exocyst complex component SEC15B
Sequence:
MEPHDQTHGGDGGEGENCSVSGFDSAEKVIIRWDATASEEAREKMIFNDPQEVNLYLNAVDEIQKYVSSGGEIENRANSAIQIAMARLEDEFRNILVSHSSPINSDSLMLSSSSSSHLEVDEDGSSSNNGNEEDDQQEEEETDLLKRSGSSASTGSATVRLPTGRGSYSRSTSSIREIELIPIESVIHLSWIARRMVSAGYLRECIQVYGSVRKSAVDSSFRRLGIEKLSIGDVQRLNWEALEQKIRRWIRAAKICVRVVFASEKLLCEHVFESVGAVNIHEACFMETVKGPAIQLFNFAEAISISRRSPEKLFKILDLHDALIELLPDIESVFDLKSSDSIRVQAAEILSRLAEAARGILSEFENAVLREPSRVPVPGGTIHPLTRYVMNYISLISEYRPTLIDLIMSKPSRNATDSNTPDFDFSELENNKGPLALHLIWIIVILQFNLEGKSKYYKNAALSHLFIMNNAHYIVQKIKGSPELREMIGDLYLRKLTGKFRQAATYYQRAAWVKVLYCLRDEGLHTKGSFSSGVSRSALRERFKSFNALFEEVHRVQSQWLVPDSQLREELKISILEKLSPAYRSFLGRFRSHIESGKHPENYIKISVEDLETEVLDLFEGYSATQHLRRRSE
Protein: Plasmepsin IV (EC 3.4.23.39) (Plasmepsin 4) (Q8IM16)
Organism: Plasmodium falciparum (isolate 3D7)
Function: During the asexual blood stage, catalyzes the cleavage of denatured host hemoglobin (Hb) (By similarity). Digestion of host Hb is an essential step which provides the parasite with amino acids for protein synthesis, and regulates osmolarity (Probable).
Subcellular location: Membrane {ECO:0000255}; Single-pass type II membrane protein {ECO:0000255}. Vacuole lumen {ECO:0000269|PubMed:23471987}. Note=In trophozoites, localizes to the digestive (or food) vacuole, an acidic vacuole where host hemoglobin is digested. {ECO:0000269|PubMed:23471987}.
Interaction partners:
Sequence:
MALTVKEEEFSNTLIKNASAFDRLKLGNLKNLKIQKKLQFLYLILFVLITGVFFFFLIGNFYSHRKLYQVIKNTKHTTIGFKIDRPHDKVLSSVLKNKLSTYVKESFKFFKSGYAQKGYLGSENDSIELDDVANLMFYGEGQIGTNKQPFMFIFDTGSANLWVPSVNCDSIGCSTKHLYDASASKSYEKDGTKVEISYGSGTVRGYFSKDVISLGDLSLPYKFIEVTDADDLEPIYSGSEFDGILGLGWKDLSIGSIDPVVVELKKQNKIDNALFTFYLPVHDKHVGYLTIGGIESDFYEGPLTYEKLNHDLYWQIDLDIHFGKYVMQKANAVVDSGTSTITAPTSFLNKFFRDMNVIKVPFLPLYVTTCDNDDLPTLEFHSRNNKYTLEPEFYMDPLSDIDPALCMLYILPVDIDDNTFILGDPFMRKYFTVFDYEKESVGFAVAKNL
Protein: Catenin beta 1 S homeolog (Ctnnb1-prov protein) (Q7ZX35)
Organism: Xenopus laevis (African clawed frog)
Interaction partners:
- Lymphoid enhancer-binding factor 1
- Lymphoid enhancer-binding factor 1
- Beta-catenin-interacting protein 1
- Beta-catenin-interacting protein 1
- Adenomatous polyposis coli homolog isoform X1
- HMG box domain-containing protein.
- Protein kinase domain-containing protein
- Transcription factor XTCF-3b
- Adenomatous polyposis coli homolog isoform X1
- HMG box domain-containing protein.
Sequence:
MATQADLMELDMAMEPDRKAAVSHWQQQSYLDSGIHSGATTTAPSLSGKGNPEDDDVDPNQVLYEWEQGFTQSFTQDQVADIDGQYAMTRAQRVRAAMFPETLDEGMQIPSTQFDSAHPTNVQRLTEPSQMLKHAVVNLINYQDDAELATRAIPELTKLLNDEDQVVVNKAAVMVHQLSKKEASRHAIMRSPQMVSAIVRTMQNTNDVETARCAAGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLIILASGGPQALVNIMRTYSYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQALGLHLTDSSQRLVQNCLWTLRNLSDAATKQEGMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPVVVKLLHPPSHWPLIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAHQDTQRRTSMGGTQQQFVEGVRMEEIVEGCTGALHILARDVHNRIVIRGLNTIPLFVQLLYSPIENIQRVAAGVLCELAQDKEAAEAIEAEGATAPLTELLHSRNEGVATYAAAVLFRMSEDKPQDYKKRLSVELTSSLFRTEPMPWNEAADLGLDIGAQGEPLGYRQDDPGYRSFHAPGYGQDAMGMDSMMDHDMGGHHPGADYPVDGLPDLSHAQDLMDGLPPGDSNQLAWFDTDL
Protein: UPF0263 protein YciU (P0A8L7)
Organism: Escherichia coli (strain K12)
Interaction partners:
- Uncharacterized protein YnaJ
- Uncharacterized protein YehS
Sequence:
MDMDLNNRLTEDETLEQAYDIFLELAADNLDPADVLLFNLQFEERGGAELFDPAEDWQEHVDFDLNPDFFAEVVIGLADSEDGEINDVFARILLCREKDHKLCHIIWRE
Protein: Serine/arginine-rich splicing factor 5 (Delayed-early protein HRS) (Insulin-induced growth response protein CL-4) (Pre-mRNA-splicing factor SRP40) (Splicing factor, arginine/serine-rich 5) (Q09167)
Organism: Rattus norvegicus (Rat)
Function: May be required for progression through G1 and entry into S phase of cell growth. May play a regulatory role in pre-mRNA splicing. Autoregulates its own expression. Plays a role in constitutive splicing and can modulate the selection of alternative splice sites (By similarity). Could play an important role in development and differentiation in the spleen and thymus.
Subcellular location: Nucleus {ECO:0000305}.
Interaction partners:
- SRSF protein kinase 1
- Splicing factor U2AF subunit
- Serine and arginine rich splicing factor 11
- Serine/arginine-rich splicing factor 3
- Serine/arginine-rich splicing factor 2
- Pre-mRNA-splicing factor SLU7
- Serine/arginine-rich splicing factor 7
- Serine/arginine-rich splicing factor 1
- Probable ATP-dependent RNA helicase DDX5
- Polyadenylate-binding protein 2
Sequence:
MSGCRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGKELCSERVTIEHARARSRGGRGRGRYSDRFSSRRPRNDRRNAPPVRTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYGDLKNAIEKLSGKEINGRKIKLIEGSKRHRSRSRSRSRTRSSSRSRSRSRSRRSKSYSRSRSRSRSRSKSRSGSRSPVPEKSQKRGSSSRSKSPASVDRQRSRSRSRSRSVDSGN
Protein: Small ribosomal subunit protein uS12m (28S ribosomal protein S12, mitochondrial) (MRP-S12) (S12mt) (MT-RPS12) (O35680)
Organism: Mus musculus (Mouse)
Subcellular location: Mitochondrion {ECO:0000250|UniProtKB:O15235}.
Interaction partners:
- Small ribosomal subunit protein mS29
- Small ribosomal subunit protein uS15m
- Small ribosomal subunit protein uS7m
- Small ribosomal subunit protein uS9m
- Large ribosomal subunit protein bL36m
- Small ribosomal subunit protein uS14m
- Small ribosomal subunit protein uS11m
- Small ribosomal subunit protein bS16m
- Small ribosomal subunit protein uS10m
- Small ribosomal subunit protein uS5m
Sequence:
MSWPGLLYGLTTSLSRGLALAPQLWAARSMATLNQMHRLGPRKEPPKRLGPTEGRPQLKGVVLRTFIRKPKKPNSANRKCCRVRLSTGKEAVCFIPGEGHTLQEHHVVLVEGGRTQDLPGVKLKVVRGKYDCGHVQKKK
Protein: Methylenetetrahydrofolate reductase (EC 1.5.1.53) (A0A8I6A4C5)
Organism: Rattus norvegicus (Rat)
Interaction partners:
Sequence:
MNHQKAGVLPDGHCYTSLGMWASEAGCVGLSVPPSISRNPAMSNEARRSGSPSPRSEGSSSGSESSKDSSRCSTPSLDPDRHERLREKMRRRMDSGDKWFSLEFFPPRTAEGAVNLISRFDRMAAGGPLFVDVTWHPAGDPGSDKETSSMMIASTALNYCGLETILHMTCCQQRQEEISGHLHRAKQLGLKNIMALRGDPVGDHWEAEEGGFSYATDLVKHIRNEFGDYFDICVAGYPKGHPDAESFEDDLKHLKEKVSAGADFIITQLFFEASSFFSFVKACEDIGISCPILPGIFPIQGYTSLRQLVKLSKLEVPQTIKDVIEPIKDNDAAIRNYGIELAVNLCRELLDSGLVPGLHFYTLNREVATMEVLKQLGMWTEDPRRPLPWAVSAHPKRREEDVRPIFWASRPKSYIYRTQGWDEFPNGRWGNSSSPAFGELKDYYLFYLKSKSPREELLKMWGEELTSEESVFEVFEHYLSGEPNRHGYRVTCLPWNDEPLAAETSLMKEELLRVNRLGILTINSQPNINGKPSSDPVVGWGPSGGYVFQKAYLEFFTSRETVEALLQVLKTYELRVNYHIVDVKGENITNAPELQPNAVTWGIFPGREIVQPTVVDPISFMFWKDEAFALWIEQWGKLYEEESPSRMIIQYIHDNYFLVNLVDNEFLLDNCLWQVVEDTFELLNRHTTKKEAQAP
Protein: Uncharacterized protein YER152C (P10356)
Organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Interaction partners:
- Uncharacterized protein YGR127W
- Uncharacterized protein YMR085W
- Aromatic amino acid aminotransferase 2
- Homeostatic regulator of DAG
Sequence:
MKYKEINFFKGHPSSRLLPREAVIQATAAILGPETREYDNDPYNRHPLTYGSDEGALWVREQICTFLNDQLFKFENGARSRTRADYLNLNSGASYGMLNILLQTTLPHNGYTRQAFIITPTYFLINNCFTDAGFKGKMTAINEQGHDSIDFESLISALEQHEAEPQPHSTTEMIQGPKLTKKVYRYVMYCIPTFANPSGNTYSLETRRRLIDIARKYDMLIITDDVYDILDYTTPSDELPSPPLRMVHIDRSTAPSGEDSFGNTVSNATFSKLIAPGLRFGYHESINANLARQLSKGGANVSGGTPSQLNSMIVGEMLRSGAAQRCIAHLRSVYSERATVLTSALKKYMPLGTEIMPLKGGYFTWITLPPAYNAMEISTILAKKFNVILADGSNFEVIGDEKNWGQSCFRLSISFLEVDDIDRGIELFGAVCKSHAITNNITM
Protein: Aldehyde dehydrogenase family 3 member A2 (EC 1.2.1.3) (EC 1.2.1.94) (Aldehyde dehydrogenase 4) (Fatty aldehyde dehydrogenase) (Microsomal aldehyde dehydrogenase) (msALDH) (P30839)
Organism: Rattus norvegicus (Rat)
Function: Catalyzes the oxidation of medium and long-chain aliphatic aldehydes to fatty acids. Active on a variety of saturated and unsaturated aliphatic aldehydes between 6 and 24 carbons in length. Responsible for conversion of the sphingosine 1-phosphate (S1P) degradation product hexadecenal to hexadecenoic acid (By similarity).
Subcellular location: Microsome membrane {ECO:0000269|PubMed:1717467}. Endoplasmic reticulum membrane {ECO:0000269|PubMed:1717467}; Single-pass membrane protein {ECO:0000305|PubMed:1717467}; Cytoplasmic side {ECO:0000269|PubMed:1717467}.
Interaction partners:
- Alcohol dehydrogenase class-3
- All-trans-retinol dehydrogenase [NAD
- Peroxisomal bifunctional enzyme
- Aldo-keto reductase family 1 member A1
- 4-aminobutyrate aminotransferase, mitochondrial
- Acetyl-coenzyme A synthetase
- Amine oxidase [flavin-containing] B
- Amine oxidase [flavin-containing] A
- Acetyl-coenzyme A synthetase, cytoplasmic
- Alanine--glyoxylate aminotransferase 2, mitochondrial
Sequence:
MERQVQRLRQTFRSGRSRPLRFRLQQLEALRRMVQEREKDILAAIAADLSKSELNAYSHEVITILGEIDFMLGNLPELASARPAKKNLLTMMDEAYVQPEPLGVVLIIGAWNYPFVLTLQPLVGAIAAGNAAIVKPSELSENTAKILAELLPQYLDQDLYMIVNGGVEETTELLRQRFDHILYTGNTAVGKIVMEAAAKHLTPVTLELGGKSPCYIDRDCDLDVACRRITWGKYMNCGQTCIAPDYILCEASSQDQIVQKIKDTVKDFYGENVKASPDYERIINLRHFKRIKSLLEGQKIAFGGETDEATRYIAPTILTDVDPNSKVMQEEIFGPILPIVSVKNVEEAINFINDREKPLALYIFSHNNKLIKRVIDETSSGGVTGNDVIMHFTVNSLPFGGVGASGMGAYHGKYSFDTFSHQRPCLLKGLKGESVNKLRYPPNSESKVSWSKFFLLKQFNKGRLQLLLLVCLVAVAAVIVKDQL
Protein: ADP-ribosylation factor-like protein 6 (O88848)
Organism: Mus musculus (Mouse)
Function: Involved in membrane protein trafficking at the base of the ciliary organelle (By similarity). Mediates recruitment onto plasma membrane of the BBSome complex which would constitute a coat complex required for sorting of specific membrane proteins to the primary cilia (By similarity). Together with BBS1, is necessary for correct trafficking of PKD1 to primary cilia. Together with the BBSome complex and LTZL1, controls SMO ciliary trafficking and contributes to the sonic hedgehog (SHH) pathway regulation (By similarity). May regulate cilia assembly and disassembly and subsequent ciliary signaling events such as the Wnt signaling cascade (By similarity). Isoform 2 may be required for proper retinal function and organization.
Subcellular location: Cell projection, cilium membrane {ECO:0000250}; Peripheral membrane protein {ECO:0000250}; Cytoplasmic side {ECO:0000250}. Cytoplasm, cytoskeleton, cilium axoneme {ECO:0000250}. Cytoplasm, cytoskeleton, cilium basal body {ECO:0000250}. Note=Appears in a pattern of punctae flanking the microtubule axoneme that likely correspond to small membrane-associated patches. Localizes to the so-called ciliary gate where vesicles carrying ciliary cargo fuse with the membrane (By similarity). {ECO:0000250}.
Interaction partners:
- Tetratricopeptide repeat protein 8
- BBSome complex member BBS1
- BBSome complex member BBS5
- BBSome complex member BBS2
- BBSome complex member BBS7
- BBSome complex member BBS4
- Protein PTHB1
Sequence:
MGLLDRLSGLLGLKKKEVHVLCLGLDNSGKTTIINKLKPSNAQSQDIVPTIGFSIEKFKSSSLSFTVFDMSGQGRYRNLWEHYYKDGQAIIFVIDSSDKLRMVVAKEELDTLLNHPDIKHRRIPILFFANKMDLRDSVTSVKVSQLLCLESIKDKPWHICASDAIKGEGLQEGVDWLQDQIQAVKT
Protein: Helix-loop-helix DNA-binding domain containing protein (Q53L62)
Organism: Oryza sativa subsp. japonica (Rice)
Subcellular location: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
Interaction partners:
Sequence:
MYDDNGAADLPTSQSASIKTIVCVPFIMHGVLELGTTDPVSEDPALVDRITASLWDTPPRAAFSSEAGVADIVVFEDLDHGNTAVEATTTMVPGEPEPHAVAGGEVAECESNAHNDLEQITMDDIGELYSLCEELDVLDDDSSSWVADPWSSFQLVPTAEATDVDDAVVAALGAIDGSCRPSPSSFVAWKRTPDSDEVQAVPLISGEPPQKLLKKAVAGAGAWMNNADGSAATMTTDQGSSIKNHVMSERRRREKLKEMFLILKSVVPSIHKVDKASILAETIAYLKELEKRVEELESSSQPSPRPMETTRRRCCKSTGKKVSAGARAKRKAPAPEDTDGERRHCVSNVNVTIMDNKELLLELQCQWKELLMTRVFDAIKGVSLDVLSVQASTSDGLLGLKIQAKVVVSAAKSSQQICSIVYLSIYQSLYLRLFGVLILAILLLHACSLPHLLPSNLG
Protein: EMBRYO SURROUNDING FACTOR 1-like protein 6 (O82377)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Interaction partners:
- EMBRYO SURROUNDING FACTOR 1.2
- EMBRYO SURROUNDING FACTOR 1.3
- EMBRYO SURROUNDING FACTOR 1.1
- At4g20420
- Similarity to tapetum-specific protein
- F-box associated ubiquitination effector family protein
- Uncharacterized protein AT4g11020
- GDSL esterase/lipase EXL5
- At4g12005
- At1g58243/At1g58243
Sequence:
MSPSHFAILFIIVISLVPLHGYANGQGFDANKLGSSVCHLGKCPKHREEVCYCCFNDRSRCYRSLYKCVAVCNRLVH
Protein: Glutathione S-transferase (EC 2.5.1.18) (E9PHN7)
Organism: Homo sapiens (Human)
Interaction partners:
Sequence:
MPMTLGYWNIRGLAHSIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLNEKFKLGLDFPNLPYLIDGTHKITQSNAILRYIARKHNLCGESEKEQIREDILENQFMDSRMQLAKLCYDPDFEKLKPEYLQALPEMLKLYSQFLGKQPWFLGDKGLEKISAYMKSSRFLPRPVFTKMAVWGNK
Protein: Early growth response protein (A0MWD2)
Organism: Taeniopygia guttata (Zebra finch) (Poephila guttata)
Subcellular location: Cytoplasm {ECO:0000256|ARBA:ARBA00004496}. Nucleus {ECO:0000256|ARBA:ARBA00004123, ECO:0000256|RuleBase:RU363046}.
Interaction partners:
Sequence:
MAAAKAEMQLLPPLQISDPFGAFPHSPPAMDTHYPKLEEMMLLSGGGPQFLAPPGASESAGFGAAGEPGEQHFEHLGADTFPEISLNNEKTLPETSYPNQTTRLPPITYTGRFSLEPAPNSSNPLWPEPLFSLVSGLVGMANAPPTSTPTSSSPSSSSQSSPLSCSVQASENNPIYSAAPTFPNSSSDIFPESQTQSFPNPSGAPIQYPPPAYPTAKTNFQVPMIPDYLFPQQQAELSLVPADQKPFPALETRAQQPSLTPLSTIKAFATQTGSQELKTLNANYQSQLIKPSRMRKYPNRPSKTPPHERPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHTKIHLRQKDKKVEKAAPASTASPIPAYSSSVTTSYPSSITTTYPSPVRTAYSSPAPSSYPSPVHTTFPSPSIATTYPSGTATFQTQVATSFSSPGVANNFSSQVTSALSDINSAFSPRTIEIC