wanglab/gogpt-training-data huggingface dataset:
Protein: Small ribosomal subunit protein mS80 (rPPR6) (Pentatricopeptide repeat-containing protein At3g02650, mitochondrial) (P0C896)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Subcellular location: Mitochondrion {ECO:0000303|PubMed:36423343, ECO:0000305}.
Interaction partners:
- Uncharacterized protein
- Large ribosomal subunit protein mL101
- Small ribosomal subunit protein mS29
- AT3g18240
- At1g64880
- Small ribosomal subunit protein mL104
- Small ribosomal subunit protein bS18c
- Large ribosomal subunit protein bL21m
- Ribosomal protein L18e/L15 superfamily protein
- Adenylyl cyclase
Sequence:
MLRSFLCRSQNASRNLAVTRISKKKTQTTHSLTSLSRFSYLESSGNASVRNIRFFSTSPPTEENPVSLPADEIPISSAAELTLEESVASALGFSESGDYGGTSVEAVGEDGDSEIVAIENEVYQFDDEKLESVLSLLRSDEESLEFGLNALNVDLHLDFVVRVFESPGISGKNLIRFLKWATQNEEITVTTSLVESLLVAIASDTRRMDAYGLWDLVKEIGEKESCGVLNLEILNELIALFGKLGKSKAAFDVFSKTEEFGFTPNAKTYYLTLEALCKRSFMDWACSVCEKMLKSGVLSEGEQMGNIITWFCKEGKAEEAYSVYELAKTKEKSLPPRFVATLITALCKNDGTITFAQEMLGDLSGEARRRGIKPFSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSFCLKALDWEKAEVLFEEMKQKGLHLNAISQGLIRAVKEMESEAKVTEDGNLLAEA
Protein: UDP-glucosyltransferase 29 (UGTPg29) (EC 2.4.1.365) (UDP-glucosyltransferase 94B1) (PgUGT94B1) (UDP-glucosyltransferase 94Q2) (PgUGT94Q2) (A0A0A6ZFY4)
Organism: Panax ginseng (Korean ginseng)
Function: Component of the dammarane-type triterpene saponins (e.g. PPD-type ginsenosides or panaxosides) biosynthetic pathway. Glycosyltransferase that catalyzes the conversion of ginsenoside Rh2 to ginsenoside Rg3. Triggers the biosynthesis of ginsenoside Rd from ginsenoside F2.
Interaction partners:
Sequence:
MDNQNGRISIALLPFLAHGHISPFFELAKQLAKRNCNVFLCSTPINLSSIKDKDSSASIKLVELHLPSSPDLPPHYHTTNGLPSHLMLPLRNAFETAGPTFSEILKTLNPDLLIYDFNPSWAPEIASSHNIPAVYFLTTAAASSSIGLHAFKNPGEKYPFPDFYDNSNITPEPPSADNMKLLHDFIACFERSCDIILIKSFRELEGKYIDLLSTLSDKTLVPVGPLVQDPMGHNEDPKTEQIINWLDKRAESTVVFVCFGSEYFLSNEELEEVAIGLEISTVNFIWAVRLIEGEKKGILPEGFVQRVGDRGLVVEGWAPQARILGHSSTGGFVSHCGWSSIAESMKFGVPVIAMARHLDQPLNGKLAAEVGVGMEVVRDENGKYKREGIAEVIRKVVVEKSGEVIRRKARELSEKMKEKGEQEIDRALEELVQICKKKKDEQ
Protein: GH17420p (Spaghetti-squash activator, isoform B (EC 2.7.11.-, EC 2.7.11.18)) (Q95SK9)
Organism: Drosophila melanogaster (Fruit fly)
Interaction partners:
Sequence:
MIYIDDSEPEGVLEPAFPMRDVTINRNVDAHKHYDVLGEVGRGKFGTVYKCRDKANGLQLAAKFVPIPKREDKRNVEREVEIMNSLQHHLIIQLYAAYEYQKMMCVVLELIEGGELFDRVVDDEFVLTERVCRVFIRQVCEAMAFIHGNGIVHLDLKPENILVLTQKGNRIKIIDFGLARKFDPDKRLRVLFGTPEFVAPEVVNFDCISYGTDMWSVGVICYVLISGLSPFMGENDIETMSNVTIAKYDFEDECFNGISPECLDFIAKLLAKDLSTRMTAAECMKHKWLQQRPATAATATPITKAASAASKSRLKSVSPVTAPSESSEDSTETIEDEDDEEEVAVQQAKQKDQQQDEELANLCGDAELENKELDATKDNLKNFIVRWETHPNSPYVFDVEGNVIAPLSETSYPHPRRTHGADSLSSSRGEYGSQRQRDRHALIHGK
Protein: Oxysterol-binding protein-like protein OBPa (Q9UW25)
Organism: Candida albicans (strain SC5314 / ATCC MYA-2876) (Yeast)
Interaction partners:
- Phosphatidylinositol 4-kinase PIK1a
- Uncharacterized protein
- Mating-type-like protein A2
- Poly
- Mating-type-like protein A1
Sequence:
MGLTSKLEKLKLKELTGHEAAVKSNVVNGADTDDTDDIDEMDNEGQSILMGIIAQLRPGMDLSRITLPTFILEKKSMLERITNFFQIPDMLLKANRTSDDVERFVSVLAWYLASWHIAPKAVKKPLNPVLGETFNCYWENISDDCSAYYISEQVSHHPPKSSYFYLVPEAKIKVDGILIPKSRFLGNSSAAMMEGWAHLTLGEHENEVYEMNQPNVYCRGILFGKMKMELGDHMYVKCRKTGLEADIDFKTKGFISGTYDAIEGVIKNSKTSEVLYQITGKWNEVMEIKDLKTGKKRVLVDTKSSVPVKPRVRPLEEQGQYESRKLWKPTIDALARRDHTVATEEKFAVEDEQRNLAKKRIDDGVEFHPKFFRPVNEKEVELQDLEYVIYKKFDLKSNPEVLTDEVLSIAPILPGQKHDEKFEIPAFKKHEET
Protein: Syntaxin-22 (AtSYP22) (AtVAM3) (Protein SHOOT GRAVITROPISM 3) (P93654)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: May provide the t-SNARE function in the vacuolar assembly. Promotes the formation of vacuolar membrane 'bulbs'. Required for inflorescence stem gravitropism.
Subcellular location: Prevacuolar compartment membrane {ECO:0000269|PubMed:10557242}; Single-pass type IV membrane protein {ECO:0000269|PubMed:10557242}. Vacuole membrane {ECO:0000269|PubMed:10557242}; Single-pass type IV membrane protein {ECO:0000269|PubMed:10557242}. Note=Prevacuolar compartment (PVC) in roots, and junction of two vacuolar membranes in shoot apical meristem.
Interaction partners:
- Vesicle transport v-SNARE 11
- Syntaxin-51
- Vesicle-associated membrane protein 727
- Vesicle transport v-SNARE 12
- Syntaxin-52
- Vacuolar protein-sorting-associated protein 33 homolog
- VAMP-like protein YKT62
- VAMP-like protein YKT61
- Vacuolar protein sorting-associated protein 41 homolog
- Vesicle transport v-SNARE 13
Sequence:
MSFQDLESGRGRSTRKFNGGRQDSTQAVASGIFQINTGVSTFQRLVNTLGTPKDTPELREKLHKTRLHIGQLVKDTSAKLKEASETDHQSGVNPSKKIADAKLARDFQAVLKEFQKAQQTAAERETTYTPFVPQSALPSSYTAGEVDKVPEQRAQLQESKRQELVLLDNEIAFNEAVIEEREQGIQEIHQQIGEVNEIFKDLAVLVNDQGVMIDDIGTHIDNSRAATSQGKSQLVQAAKTQKSNSSLTCLLLVIFGIVLLIVIIVLAA
Protein: Uncoordinated 115b, isoform B (Q8INN5)
Organism: Drosophila melanogaster (Fruit fly)
Interaction partners:
Sequence:
MNLMSGSTNRSSPFVFVPFSPQTGKQKIYCAKCTKKCSGEVLRVADNHFHKACFQCCQCKKSLATGGFFTKDNAYYCIPDYQRLYGTKCANCQQYVEGEVVSTMGKTYHQKCFTCSKCKQPFKSGSKVTNTGKEVLCEQCVTGAPVSPSRQATGGGVSSPAPPAESPTRATAHQQHGSVISHKAHLKEDYDPNDCAGCGELLKEGQALVALDRQWHVSCFRCKACQAVLNGEYMGKDAVPYCEKCYQKGFGVKCAYCSRFISGKVLQAGDNHHFHPTCARCTKCGDPFGDGEEMYLQGSAIWHPRCGPGPSESGIILNGGGGTSSVVGGASNGNFTDTECDRMSSSALSEMHYRTVSPGLILREYGRPNAEDISRIYTYSYLTDAPHYLRKPIDPYDKTPLSPHFHRPSSYATTASNAGSVAGSRPPSRPHSRTRSAMKVLVDAIRSETPRPKSPGMNNEEPIELSHYPAAKKPPPGEQPKIERDDFPAPPYPYTDPERRRRYSDTYKGVPASDDEDENVENGKPNGKVKNGEEQQRLQREAEQLEKLNSGIGSAIAKDLKEHAKYRKWKQNNLDPRNASRTPSASKEPLYKLRYESPIGASPSRNLDHQKPFYEDEMFDRSTSYRGSLGKSLGNAPSYNAIHSYRSPPKPGYGFKTTTLPYIRNGFSSDFSYGGLGDKTHSTDLSCGKSEASVDSITEGDRRALMGGDLPASSTYSGALSYHYPQAGLIRRSLPNMSHSIISCANAKL
Protein: C2H2 and C2HC zinc fingers superfamily protein (F4K5Q7)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Interaction partners:
- Nuclear transcription factor Y subunit C-5
- C2H2 and C2HC zinc fingers superfamily protein
- Transcription factor MYB64
- Protein RADIALIS-like 6
- Cytochrome c oxidase assembly protein COX11
- Zinc finger protein 6
- Actin-depolymerizing factor 8
- Transcription factor bHLH18
- Transcription factor bHLH95
- C2H2 type zinc finger transcription factor family
Sequence:
MSSSMSSAGSSTPKSKKLKGIVVDMEKSKEKATRNTILKLGSPQEVTSERRIENSSFGSSAVRRGREIMKFYPSKSNKIYTCHFCKKGFSTSQALGGHQNAHKQEREWDKKRKEMEAEYPGLSFLNPFLDKPHILLGGYSQDALSNENHLGITLDPFKRLIYPSFNAGMNMAVVPRVTPTRFFTGNTSTNGSTSRVPDPLPSYNNLYPSNSRNVLPFPPPQTTKLSSNFVSQGNVLSEENFISKIGTNNIVEIDDDDDDIQPEEEKTKSGRIDLSLSL
Protein: Mechanosensitive ion channel protein Msy1 (O74839)
Organism: Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Function: Regulates intracellular calcium levels and cell volume for survival in response to hypo-osmotic shock. Acts as a mechanosensitive calcium channel in response to membrane stretch. The conductance is about 0.25 nanosiemens. Involved in maintaining vacuole integrity and protecting the nuclear envelope upon hypo-osmotic shock.
Subcellular location: Endoplasmic reticulum membrane {ECO:0000269|PubMed:22910366}; Multi-pass membrane protein {ECO:0000305}. Note=Perinuclear endoplasmic reticulum. {ECO:0000269|PubMed:22910366}.
Interaction partners:
- Mechanosensitive ion channel protein Msy2
Sequence:
MSSPTSPTSSPGRHHWSNSKDGMPPEYTNQDPNSDQADNENSDAKAHQPQHSPQHSTENQGHTGTSDTSSLEMELSKLHPESKQRQLPHSPEHERSRSPIASVVSYRSHMTLEDENQIFNAEMAVRGSQSLQRRPTGRSVRGSMRRLSSHRSKSMRTSKSKKSGDYERTAENEEAAQEAENHLDNFGVVTFGTEAPIKAPDHPVTIFGRIFKFIQQRSFYLRSLIYIIPLGVLLLIPVFIGRFYHPQPPYRDELGHEYERHLHVGGVDLMWMAIWWEIIWLSIWAARYAAKVIPYFFAFFVSFISNNVTKWRCMAVALEFPITLFLWMLAVYVSFLPIMTRRHIGDYGVPDHVRVKLPWQQSANNVLITLFITSIMNLVEKVLMQLIAMSLHRREYESRILYNKFAINELARLYGYARQRSFDFKDAIHRAQADVFKFADHQHGKKRAAAARVAQNALNKTTYKAISAFNFATDMVNKVAGEITNREVEKSSSPKSVVLHLLKTTRGCQSLARCLFEALVNPENPDLVLDDFIPVYTDETGEVDNATLEACYSIFDRDLNGDITCEEIELACVEIGKERKSISASLRDLNDSISKLDGICMFIVAVITLFIFLYLIARNFSGVLTSAGTTLLGLSWLFSGSAQELLSSIIFVFVKHPYDVGDRVDVMINGTVTSAMVKEISIMSTEFRLLTGKVIQAPNSLLNTLWILNMRRSDGIADPVTVNLKFGTTLQQIEQLRIKIIDFLKEEKRDYKPDLLTEVTDLPDLYSMSLCVVFFHKYNFQDEVLRMRRRNMFMCALMTYMQELDIVSPIFNSPGKSKDSPMYVNFNNGSMEGVKLSGGNDGGGTENHRDSTVGGGILKNPKAYPYREPTPPGSSDSDTASVSKKRVDFSLGTRHLMPAFDDVADIGSKRLGRDSLPDAVIENAGTEAMRREAEERRRAEEEEYERSQQESSSNEENENASRTSGARFSFSSKASRLSARPSARTVPPLQHISIQDLREPNENNTSKSARL
Protein: Protein TIFY 11a (OsTIFY11a) (Jasmonate ZIM domain-containing protein 9) (OsJAZ9) (OsJAZ3) (Q8GSI0)
Organism: Oryza sativa subsp. japonica (Rice)
Function: Repressor of jasmonate (JA) responses. Forms a ternary complex with RSS3 and BHLH94 to negatively regulate JA-responsive genes. Acts as positive regulator of tolerance to salt stress. Involved in salt tolerance by modulating potassium homeostasis through JA signaling and regulation of the expression of potassium ion transporter genes. Acts as a transcriptional regulator targeted by the SCF(COI1) E3 ubiquitin ligase complexes in the JA signaling pathway, and interacts with BHLH062 that may directly regulate the ion transporter genes. Acts as positive regulator of tolerance to dehydration stress. Acts as negative regulator of tolerance to cold stress by interacting with MYB30.
Subcellular location: Nucleus {ECO:0000255|PROSITE-ProRule:PRU00768, ECO:0000269|PubMed:19618278, ECO:0000269|PubMed:28062835}.
Interaction partners:
- Transcription factor BHLH062
- Coronatine-insensitive protein homolog 1a
- Coronatine-insensitive protein homolog 1b
- Transcription factor MYC2
- Protein NINJA homolog 1
- Protein TIFY 9
- Protein TIFY 3
- Coronatine-insensitive protein homolog 2
- Protein TIFY 6b
Sequence:
MASTDPMTRRFAVACGVLSQYVKANSSQPSTAAPVAQGVSGLMAAAAAAAAAPVVQEPGCEVDGGGQQFTIFYAGKVVVIDRCTPAMAAELMRFASAAQGGGGAPEAPPALVDMPIARKASLKRFLAKRKATPASARSSYVVRAAAAEEEQPPAKKAKAAVERREDWLALGSLGHMHSR
Protein: Growth hormone 1 (Somatotropin precursor) (Q1JQ34)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Subcellular location: Secreted {ECO:0000256|ARBA:ARBA00004613, ECO:0000256|RuleBase:RU003618}.
Interaction partners:
- Growth hormone receptor a.
- Appetite-regulating hormone isoform X1
- Somatolactin alpha
- Pro-opiomelanocortin protein
- Prolactin receptor
- Growth hormone receptor b
- Prolactin.
Sequence:
MARALVLLQLVVVSLLVNQGKASENQRLFNNAVIRVQHLHQLAAKMINDFEEGLMPEERRQLSKIFPLSFCNSDSIETPTGKDETQKSSMLKLLRISFRLIESWEFPSQTLSSTISNSLTIGNPNQITEKLADLKMGISVLIKGCLDGQPNMDDNDSLPLPFEDFYLTVGETSLRESFRLLACFKKDMHKVETYLRVANCRRSLDSNCTL
Protein: Constitutive lysine decarboxylase (LDCC) (EC 4.1.1.18) (P52095)
Organism: Escherichia coli (strain K12)
Function: Plays a role in lysine utilization by acting as a lysine decarboxylase.
Interaction partners:
- Putrescine aminotransferase
- Inducible lysine decarboxylase
- Cadaverine/lysine antiporter
- Uncharacterized protein YaeR
- Diaminopimelate decarboxylase
- Gamma-aminobutyraldehyde dehydrogenase
- Polyamine aminopropyltransferase
- Regulatory ATPase RavA
Sequence:
MNIIAIMGPHGVFYKDEPIKELESALVAQGFQIIWPQNSVDLLKFIEHNPRICGVIFDWDEYSLDLCSDINQLNEYLPLYAFINTHSTMDVSVQDMRMALWFFEYALGQAEDIAIRMRQYTDEYLDNITPPFTKALFTYVKERKYTFCTPGHMGGTAYQKSPVGCLFYDFFGGNTLKADVSISVTELGSLLDHTGPHLEAEEYIARTFGAEQSYIVTNGTSTSNKIVGMYAAPSGSTLLIDRNCHKSLAHLLMMNDVVPVWLKPTRNALGILGGIPRREFTRDSIEEKVAATTQAQWPVHAVITNSTYDGLLYNTDWIKQTLDVPSIHFDSAWVPYTHFHPIYQGKSGMSGERVAGKVIFETQSTHKMLAALSQASLIHIKGEYDEEAFNEAFMMHTTTSPSYPIVASVETAAAMLRGNPGKRLINRSVERALHFRKEVQRLREESDGWFFDIWQPPQVDEAECWPVAPGEQWHGFNDADADHMFLDPVKVTILTPGMDEQGNMSEEGIPAALVAKFLDERGIVVEKTGPYNLLFLFSIGIDKTKAMGLLRGLTEFKRSYDLNLRIKNMLPDLYAEDPDFYRNMRIQDLAQGIHKLIRKHDLPGLMLRAFDTLPEMIMTPHQAWQRQIKGEVETIALEQLVGRVSANMILPYPPGVPLLMPGEMLTKESRTVLDFLLMLCSVGQHYPGFETDIHGAKQDEDGVYRVRVLKMAG
Protein: Diacylglycerol kinase gamma (DAG kinase gamma) (EC 2.7.1.107) (88 kDa diacylglycerol kinase) (Diglyceride kinase gamma) (DGK-gamma) (Q91WG7)
Organism: Mus musculus (Mouse)
Function: Diacylglycerol kinase that converts diacylglycerol/DAG into phosphatidic acid/phosphatidate/PA and regulates the respective levels of these two bioactive lipids. Thereby, acts as a central switch between the signaling pathways activated by these second messengers with different cellular targets and opposite effects in numerous biological processes. Has no apparent specificity with regard to the acyl compositions of diacylglycerol (By similarity). Specifically expressed in the cerebellum where it controls the level of diacylglycerol which in turn regulates the activity of protein kinase C gamma. Through protein kinase C gamma, indirectly regulates the dendritic development of Purkinje cells, cerebellar long term depression and ultimately cerebellar motor coordination.
Subcellular location: Membrane {ECO:0000250|UniProtKB:P49620}. Cytoplasm, cytosol {ECO:0000250|UniProtKB:P49619}. Cytoplasm, cytoskeleton {ECO:0000250|UniProtKB:P49620}.
Interaction partners:
- Lipoprotein lipase
- Dihydroxyacetone phosphate acyltransferase
- Glycerol-3-phosphate dehydrogenase, mitochondrial
- Phospholipase D2
- Phospholipase D1
- Membrane-bound glycerophospholipid O-acyltransferase 1
- 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase
- Membrane-bound glycerophospholipid O-acyltransferase 2
- Phosphatidate cytidylyltransferase 2
- 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-1
Sequence:
MSEEQWVSLSSEEFDQLQKYSEYSSKKIKDVLAEFNEGGSLRQYDPHKPISYDVFKLFMRAYLEVDLPQPLSTHLFLAFSQKPRQETPDHPKEGASSSEPNVSDYNSDNAAKADEACAPDTESKTTKTQAPSKELEAAAPWEDPGALASSSDAPVVYLKDVVCYLSLMETGRPQDKLEFMFRLYDSDENGLLDQAEMDQIVSQMLHVAQYLEWDPTELRPILKEMLQGMDYDKDGFVSLQEWINGGMTTIPLLVLLGMDDSGSKGDGRHAWTLKHFKKPTYCNFCRAMLMGVGKQGLCCIYCKYTVHQRCVSKTIHGCVKTNSKAKRSGEVMQHAWVEGNSSVKCDRCHKSIKCYQSVTARHCVWCRMTFHRKCELSTVCDGGELKDHILLPTSICPVSGDRQGGKSDGSVAAKGELVTQYKIIPSPGTHPLLVLVNPKSGGRQGERILRKFHYLLNPEQVFNLDNGGPTPGLNFFHDTPDFRVLACGGDGTVGWILDCIDKANFTKHPPVAVLPLGTGNDLARCLRWGGGYEGGSLTKILKEIEQSPLVMLDRWYLEVMPREEVENGDQVPYNIMNNYFSIGVDASIAHRFHMMREKHPEKFNSRMKNKLWYFEFGTSETFAATCKKLHDHIELECDGVEVDLSNIFLEGIAILNIPSMYGGTNLWGETKKNRAVIRESRKSVTDPKELKCCVQDLSDQLLEVVGLEGAMEMGQIYTGLKSAGRRLAQCSSVTIRTNKLLPMQVDGEPWMQPQCTIKITHKNQAPMMMGPPQKSSFFSLRRKSRSKD
Protein: tRNA (cytosine(34)-C(5))-methyltransferase, mitochondrial (EC 2.1.1.-) (NOL1/NOP2/Sun domain family member 3) (Q9H649)
Organism: Homo sapiens (Human)
Function: Mitochondrial tRNA methyltransferase that mediates methylation of cytosine to 5-methylcytosine (m5C) at position 34 of mt-tRNA(Met). mt-tRNA(Met) methylation at cytosine(34) takes place at the wobble position of the anticodon and initiates the formation of 5-formylcytosine (f(5)c) at this position. mt-tRNA(Met) containing the f(5)c modification at the wobble position enables recognition of the AUA codon in addition to the AUG codon, expanding codon recognition in mitochondrial translation.
Subcellular location: Mitochondrion matrix {ECO:0000269|PubMed:27214402, ECO:0000269|PubMed:27356879, ECO:0000269|PubMed:27497299}.
Interaction partners:
- 28S rRNA
- tRNA
- Heterogeneous nuclear ribonucleoprotein K
- Putative methyltransferase NSUN7
- Nucleolar complex protein 2 homolog
- Methionyl-tRNA formyltransferase, mitochondrial
- 28S rRNA
- Ribosome biogenesis protein BRX1 homolog
- Nucleic acid dioxygenase ALKBH1
- THO complex subunit 4
Sequence:
MLTQLKAKSEGKLAKQICKVVLDHFEKQYSKELGDAWNTVREILTSPSCWQYAVLLNRFNYPFELEKDLHLKGYHTLSQGSLPNYPKSVKCYLSRTPGRIPSERHQIGNLKKYYLLNAASLLPVLALELRDGEKVLDLCAAPGGKSIALLQCACPGYLHCNEYDSLRLRWLRQTLESFIPQPLINVIKVSELDGRKMGDAQPEMFDKVLVDAPCSNDRSWLFSSDSQKASCRISQRRNLPLLQIELLRSAIKALRPGGILVYSTCTLSKAENQDVISEILNSHGNIMPMDIKGIARTCSHDFTFAPTGQECGLLVIPDKGKAWGPMYVAKLKKSWSTGKW
Protein: RNA binding protein (RNA-binding protein with multiple splicing 2b) (RNA-binding protein, mRNA-processing factor 2b) (Rbpms2 protein) (Q7ZUL7)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Subcellular location: Cytoplasm, Stress granule {ECO:0000256|ARBA:ARBA00004210}. Nucleus {ECO:0000256|ARBA:ARBA00004123}.
Interaction partners:
- Dead end protein 1
- Nanos homolog 3
- Deleted in azoospermia-like
- Bucky ball
- RNA-binding motif protein 24b
Sequence:
MSVKSDSEPNNNVSLEEEVRTLFVSGLPTDIKPRELYLLFRPFKGYEGSLIKLTSKQPVGFVTFDSRSGAEAAKNALNGVRFDPENPQTLRLEFAKANTKMAKSKLMGTPNPTNIHPALGAHFIARDPYDLTGAALIPASPEAWSPYPLYTPELSPGLPHTAFTYPAAAAAAAAALHAQMRWYPSTSDSSQPGWKSRQFC
Protein: Large ribosomal subunit protein uL1m (Q9VHT5)
Organism: Drosophila melanogaster (Fruit fly)
Subcellular location: Mitochondrion {ECO:0000256|ARBA:ARBA00004173}.
Interaction partners:
- Large ribosomal subunit protein uL11m
- Large ribosomal subunit protein uL22m
- Large ribosomal subunit protein bL19m
- Large ribosomal subunit protein bL20m
- Large ribosomal subunit protein bL21m
- Large ribosomal subunit protein uL4m
- Small ribosomal subunit protein bS16m
- GM03767p
- Large ribosomal subunit protein bL17m
- Mitochondrial ribosomal protein L2
Sequence:
MQSILSSMRALALRQSTVEPLRLLHLSAVSEAARKGTREKARKKKVKVEVKKVGFIPHNQRNKKINVKRADKHVDDSWKQVPKDDCYVGRYYRWPVYSVQEAIQCHRETHHPSMYNVPNAPLNLDIELNMQAEKITRFVDNFQRMAMIPHKFDHGEERKIIVFTKGNNEVLEAREAGASLVGGVELIKDITSGELLLSDYQYVIAHPNILAELVALRGLMKRKFPNPKSETLGTNLAEMIVKFSSGISYSAAKDEYQQNFGLITASVGTLDMDVQKLEENIKFLLQDINTMRPKREGRFITRVLLKSPPSSEQLKIDPFVYVPEMWDKSTAKVKRDGAKKQTEPAEPQEAVASN
Protein: Homoserine kinase, putative (EC 2.7.1.39) (Q587A9)
Organism: Trypanosoma brucei brucei (strain 927/4 GUTat10.1)
Interaction partners:
- threonine synthase
- Homocysteine S-methyltransferase, putative
- Branched-chain amino acid aminotransferase, putative
- Branched-chain amino acid aminotransferase, putative
- Cystathionine beta-synthase, putative
- 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase
- Kynurenine aminotransferase, putative
- Adenosylhomocysteinase
Sequence:
MCVLPRKVVVRVPATTANMGPAYDSIGMALSIFAELTVEHSDAFSMSVEGEGCEEIQRDEQNMVVRACCLAFEYGNKKMPTLRFIMRSDIPYGCGCGSSSAAAVAGFVAGLQLCGHTMATGSEEELLQAIAKFEGHPDNAAPALYGGIQLCYKEHGGRVLTTRVPTPFALSVVLFIPREKMKENTHVTRGLIPDFVPLEDAVYNISCASILVLALSTGDLRTLRSCGDKIHEGQRGDALFPHFRPCVNAAKEAGAAYAFLSGAGPTVCALVGGRHGEVLTQPKEERVAERVALAMIDAACAVGVEGRVVITQPSDQGVHVVGAKPVRHNLVYVST
Protein: Photosynthetic NDH subunit of subcomplex B 3, chloroplastic (Protein PnsB3) (NDH-DEPENDENT CYCLIC ELECTRON FLOW 4) (Q9LU21)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: NDH shuttles electrons from NAD(P)H:plastoquinone, via FMN and iron-sulfur (Fe-S) centers, to quinones in the photosynthetic chain and possibly in a chloroplast respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient.
Subcellular location: Plastid, chloroplast thylakoid membrane {ECO:0000269|PubMed:18785996}.
Interaction partners:
- Photosynthetic NDH subunit of subcomplex B 1, chloroplastic
- Photosynthetic NDH subunit of subcomplex B 2, chloroplastic
- NAD
- NAD
- Photosynthetic NDH subunit of subcomplex B 4, chloroplastic
- NAD
- Photosynthetic NDH subunit of subcomplex B 5, chloroplastic
- NAD
- Photosynthetic NDH subunit of lumenal location 3, chloroplastic
- Photosystem I chlorophyll a/b-binding protein 6, chloroplastic
Sequence:
MGSVQLSGSGLVASLPPNHSFSHKTKLNKPNSYFFRSKHNAARTKTVRAISTAPASQPPAADEPDEPPAVDFAFVHSVLLPDGTPDVHWRRANGGQKLRDIMLDSNIELYGPYSKPLSNCAGVGTCATCMVEIVNGKELLNPRTDIEKEKLKRKPKNWRLACQTNVGNPDSTGLVVIQQLPEWKAHEWNIPKNIPNDDDLETST
Protein: Homeobox protein Hox-A2 (Homeobox protein Hox-1K) (O43364)
Organism: Homo sapiens (Human)
Function: Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis.
Subcellular location: Nucleus.
Interaction partners:
- Pre-B-cell leukemia transcription factor 1
- Roundabout homolog 2
- E3 SUMO-protein ligase EGR2
- Roundabout homolog 1
- Homeobox protein Hox-A3
- Homeobox protein Hox-A5
Sequence:
MNYEFEREIGFINSQPSLAECLTSFPPVADTFQSSSIKTSTLSHSTLIPPPFEQTIPSLNPGSHPRHGAGGRPKPSPAGSRGSPVPAGALQPPEYPWMKEKKAAKKTALLPAAAAAATAAATGPACLSHKESLEIADGSGGGSRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQCKENQNSEGKCKSLEDSEKVEEDEEEKTLFEQALSVSGALLEREGYTFQQNALSQQQAPNGHNGDSQSFPVSPLTSNEKNLKHFQHQSPTVPNCLSTMGQNCGAGLNNDSPEALEVPSLQDFSVFSTDSCLQLSDAVSPSLPGSLDSPVDISADSLDFFTDTLTTIDLQHLNY
Protein: PHAF1 protein At3g51130 (Q9SD33)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Interaction partners:
Sequence:
MKDYSKIGDKLVMQRPRRRLEGTAMGATVFDLRPGVGIGPFSIGMPICEAFAQIEQQPNIYDVVHVKYYDEDPLKLDVVISFPDHGFHLRFDPWSQRLRLVEIFDVKRLQMRYATSMIGGPSTLATFVAVYALFGPTFPGIYDKERGIYSLFYPGLSFEFPIPNQYTDCCHDGEAALPLEFPDGTTPVTCRVSIYDNSSDKKVGVGKLMDRASVPPLPPGSLYMEEVHVKPGKELYFTVGGQHMPFGASPQDVWTELGRPCGIHPKQVDQMVIHSASDPRPKTTICGDYFYNYFTRGLDILFDGETHKVKKFVLHTNYPGHADFNSYIKCNFVISAGADAAEANRSGNKITPSTNWDQVKEILGECGPAAIQTQGSTSNPFGSTYVYGYQNVAFEVMKNGHIATITLFQS
Protein: Ras guanine nucleotide exchange factor A (Aimless) (RasGEF domain-containing protein A) (Q54PQ4)
Organism: Dictyostelium discoideum (Social amoeba)
Function: Ras-bound GDP/GTP exchange factor required for normal activation of adenylyl cyclase. Component of the Sca1 complex, a regulator of cell motility, chemotaxis and signal relay. The Sca1 complex is recruited to the plasma membrane in a chemoattractant- and F-actin-dependent manner and is enriched at the leading edge of chemotaxing cells where it regulates F-actin dynamics and signal relay by controlling the activation of rasC and the downstream target of rapamycin complex 2 (TORC2)-Akt/protein kinase B (PKB) pathway.
Subcellular location: Cell membrane {ECO:0000269|PubMed:20493808}. Note=The Sca1 complex is recruited to the plasma membrane in a chemoattractant- and F-actin-dependent manner and is enriched at the leading edge of chemotaxing cells (PubMed:20493808). Membrane localization of the Sca1 complex is regulated by scaA phosphorylation by PKB and PKB-related PKBR1 (PubMed:20493808). {ECO:0000269|PubMed:20493808}.
Interaction partners:
- Ras-like protein rasC
- Ras guanine nucleotide exchange factor H
- Sca1 complex scaffold protein scaA
- Protein phosphatase 2A scaffold subunit
- Protein phosphatase 2A catalytic subunit B
- Ras-like protein rasD
- Ras-like protein rasG
- Sca1 complex protein phr
- Ras-interacting protein RIP3
Sequence:
MITPTSFEPVELLYSKKKVNRTNWKKNVLKSNPEINNLCERIYPINRAIQFGKQFHPGKAEVKQKLDKTAIIQLILQHLSTKGLKQTKQTLEKEARTTTPIVEGLNESRLVTYIRNALKDTDRIYDLSMEHTEYSKEERQSKITEREELLFQMDLLEDEDEDDGVNIWDEPTENIITEKVHTTEYDINKSKENKDDQDDEVVKFASLNKLVEHLTHDSKHDLQFLKTFLMTYQSFCTPEKLMSKLQQRYNCPSGHDEMATRNIQIRVINVLKGWVDNYYSDFDDKLIAMLRTFIDQIQIKFPAPASAVNKSLTKMVEKLSPVNDSKHIFNEKTPEPMVPKNIFSNNLSIYDIDEEEIARQLTLIEFEIYRNIKPPELLNQSWNKTKLKSRAPNVLKMIDRFNSVSMWVATMIIQTTKVKARARMMTRFIKIADHLKNLNNYNSLMAIIAGLNFSSVYRLKYTREELSAQTMRTYSDLEKIMNSEGSFKTYRTRLQNVPPMLPYLGVHLTDLTFIDENPNNFVTDVGGKQVSLINFTKRTLVFKIISLIQETQVVPYNLQPVHQIQEFLLNIRSDLKAHTLDQYQQELYRESLKREPKKAQRSDVL
Protein: NADH dehydrogenase (Ubiquinone) 20 kDa subunit-like, isoform A (NADH dehydrogenase (Ubiquinone) 20 kDa subunit-like, isoform B) (Q9VAK5)
Organism: Drosophila melanogaster (Fruit fly)
Interaction partners:
- NADH dehydrogenase 1 alpha subcomplex subunit 9, mitochondrial
- Complex I-49kD
- NADH dehydrogenase 1 alpha subcomplex subunit 12
- NADH-ubiquinone oxidoreductase chain 1
- NADH dehydrogenase iron-sulfur protein 4
- NADH dehydrogenase iron-sulfur protein 3, mitochondrial
- NADH-ubiquinone oxidoreductase chain 4
- NADH-ubiquinone oxidoreductase chain 3
- NADH dehydrogenase 1 beta subcomplex subunit 9
- NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial
Sequence:
MISFLKLARNPGQLLLPGSGVLQSQWLRGQKTMPVYDYRCQNPPKWGYSAFGRNQKTWGEWTCARLDDLLNWGRKGSLWPLTFGLACCAVEMMHIAAPRYDMDRYGVVFRASPRQADVLIVAGTLTNKMAPAFRKIYDQMPEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALMYGILQLQKKVKRMRTLQMWYRK