wanglab/gogpt-training-data huggingface dataset:
Protein: Dpp target protein (FI05209p) (Q9VG45)
Organism: Drosophila melanogaster (Fruit fly)
Interaction partners:
- Protein amalgam
- Protein decapentaplegic
- Brinker
- Optomotor-blind protein
Sequence:
MASISKSRASSCSSRKRLHLQPGSLLCVIVFCLLASCSAQPIESTSLPAEVDDVEGTTILPIQLEESSPTPEPIIKNETATALPVVELKVAESNPVDPVEATDNFVSVYGGNLEQDIKNDVNSEVEDAPSPVEPIIEEVQKVAEAELENHEIKLAVQSAREPKSLDAEEESKTIDEDRLENQDKAETVTDNIAVSSEQMESHIRPLPNVTSDLVSVILNEDKAITEQPITKTNLLALEQEHEKFEEIDESTTVPVYEEPKHQVTKKQGVEDPSTVEIPPEVSDEQHFDPSEEPQTVRDERNLEEHDDNQNEINENIIEGEEAPAKTSTTAGPLVTVEPTKSITEPNEEIEKKAEAEAKAEMEEQVEVNTPSVDATVVAADPDEAQDEVIVAETTVEAITEAAKIVVEEEPKEDVSVQQEHLKEQRVQTVSESNRQASPTEEPIKEVIFPKGDDESPVEGDSSESDEKPTERAIVDDDSSEEQNEDVVDEGKSSSDDSTATPLVSYPPHDAGQTFDSNSADEHSAQLSGATNYRSTLIIALCSGTAVIFIVASLVIFVVSFQRQHGTLDIEMQEQRLGKDIQEEDNVQMKLLDVDLSSPVILPMGNEETDECL
Protein: Zinc finger protein 346 (Just another zinc finger protein) (Q9R0B7)
Organism: Mus musculus (Mouse)
Function: Binds with low affinity to dsDNA and ssRNA, and with high affinity to dsRNA, with no detectable sequence specificity (By similarity). May bind to specific miRNA hairpins (By similarity).
Subcellular location: Nucleus, nucleolus {ECO:0000250}. Cytoplasm {ECO:0000250}. Note=Nuclear at steady state, primarily in the nucleolus. Shuttles between the nucleus and cytoplasm when associated with XPO5 (By similarity). {ECO:0000250}.
Interaction partners:
- Protein S-Myc
Sequence:
MECPAPDATDAADPGEAGPYKGSEEPEGREPDGVRFDRERARRLWEAVSGAQPAGREEVEHMIQKNQCLFTSTQCKVCCAMLISESQKLAHYQSKKHANKVKRYLAIHGMETIKGDVKRLDSDQKSSRSKDKNHCCPICNMTFSSPAVAQSHYLGKTHAKSLKLKQQSTKGAALQQNREMLDPDKFCSLCHSTFNDPAMAQQHYMGKRHRKQETKLKLMAHYGRLADPAVSDLPAGKGYPCKTCKIVLNSIEQYQAHVSGFKHKNQSPKTLVTLGSQTPVQTQPTPKDSSTVQD
Protein: Probable LRR receptor-like serine/threonine-protein kinase At4g20450 (EC 2.7.11.1) (C0LGQ7)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Subcellular location: Membrane {ECO:0000305}; Single-pass type I membrane protein {ECO:0000305}.
Interaction partners:
Sequence:
MEGIHKLIFLALIWIFLITNIVDAQDQQGFISLDCGMPRNESSYTDESTGLNFSSDADFISSGKSGTIKTEDSDSGVKYIKPYKQLRYFPEGARNCYNLTVMQGTHYLIRAVFVYGNYDLKQRPKFDLYLGPNFWTTINLQDPSGGFYYRIWLQDGTVEEVIHMPKSNNLDICLVKTGTTTPFISSLELRPLRDDTYTTTTGSLKLISRWYFRKPFPTLESIIRHPDDVHDRLWDVYHADEEWTDINTTTPVNTTVNAFDLPQAIISKASIPQVASDTWSTTWSIQNPDDDVHVYLHFAEIQALKPSDTREFSILWNKNTIIRDYYSPLEFMADTVPIRTSSKCGDDGFCSLDLTRTKSSTLPPYCNAMEVFGLLQLLQTETDENDVTTLKNIQATYRIQKTNWQGDPCVPIQFIWTGLNCSNMFPSIPPRITSIDFSNFGLNGTITSDIQYLNQLQKLDLSNNNLTGKVPEFLAKMKLLTFINLSGNNLSGSIPQSLLNMEKNGLITLLYNGNNLCLDPSCESETGPGNNKKKLLVPILASAASVGIIIAVLLLVNILLLRKKKPSKASRSSMVANKRSYTYEEVAVITNNFERPLGEGGFGVVYHGNVNDNEQVAVKVLSESSAQGYKQFKAEVDLLLRVHHINLVTLVGYCDEGQHLVLIYEYMSNGNLKQHLSGENSRSPLSWENRLRIAAETAQGLEYLHIGCKPPMIHRDIKSMNILLDNNFQAKLGDFGLSRSFPVGSETHVSTNVAGSPGYLDPEYYRTNWLTEKSDVFSFGVVLLEIITSQPVIDQTREKSHIGEWVGFKLTNGDIKNIVDPSMNGDYDSSSLWKALELAMSCVSPSSSGRPNMSQVANELQECLLTENSRKGGRHDVDSKSSLEQSTSFGPEHIPDAR
Protein: Rad, Gem/Kir family member 1, isoform B (A1ZBJ6)
Organism: Drosophila melanogaster (Fruit fly)
Interaction partners:
- non-specific serine/threonine protein kinase
Sequence:
MTADPISLCFWICLQPDRYVPGSPIFRETSSPTPHPALAGPITSPPTSASSSSSTSTAADSTASSTINAPGAGPGGTATTRSRGARAMTASLAHAAQGNHNNNSSTRSTSNSSSNTVKSKPPAGYMSTRSAAMMALALGQTSGGRSDKSPQAPRAASPAQSQSQSQSQSQSQSPHPGATRRLSNASSLPSNVSRSKPSTPTATRAAAQLNGSGLFSGGSNSSGSDNDGFSASGSSAATALRRLYFKSGRSIKNKINASTTSSTPLNGLPLNPVSSAYHNSVGGPMHNMTTAGGVPKLVVMGTSSASIPDTTINTSTDSACTLITNVTHTDTSETCDSLDMGDNSCPSEPLFSSLEEPLLTAVHIDSEHEGFGGMGGGRGGANGRGATELELTSCSRYPPRPDMNLQDSVESQESCLSILTGEPSSTTPLLSSQRRHPTGGHSPGSQRQEERRERKEREPSTAPPPTRIREHFTFDPPQSPKSARSSEKSTSHFSFKNYGNESAKDAGVGSGKGTGSGAGVGGGGGSGSGVGGNGVMAASEGDEEDDERSGDSIGNRSKKLRPRERDPNHISPSVSPSHSRRASPKREKRRTTPIASTGAISKVSSAPPTMKDANFFGSSGKQKQRQSQNIPPHQLSPSSQQRKYSSSSSSGSSERCLREATGPGTMFPFDREALDYERIQRECFAPSSTTASNSSDSEAENCSVYERKSGADIFQQYSRLSHQEQLQQHYQEPRDWERDRPPSRKNSKRIRPDSVIHTTIRENQQYVPQSDAFYPQAKSSSSPSDHSYAELNKFEDIASKFEQIPPKHGSVSGSGSGSLLNLHHKMPSPGSESAVSPTDSARRRSFKNKQRHQKEEHFYIQTEDRSGTAAGNGPINVTANPLEAAAVCKQPRATIVVQQPSLSLDNTVETLLIKNEGDFISVEQGKELVARKRNSQQLAHPPAHLHHHTQNHAHNHHTLQQQQHQQQQQQQHKRDENMRQLLDVTNTLTIEELRDFQMRYGSPHHSRSQSVKMPGSRASGRPNQLCLPQQRSRVASMPNTGVEEEYYRLRHFSITGKGVVNRGDSLKSRRSRSNNSVASSNSSTEHLTTQQQLSAPASVSARTSLASSRESSTSNPGNGPYRVLMLGGPAVGKSSLVSQFMTSEYLHAYDTSIDDESGEKAVSVLLSGEESELIFIDHGYTEMTPDECLTNYDPHGYCVIYSAADRSSFSVAEQVLQVLWTNQNIAQKAVILVSNKADLARSRLVTSEEGKAMATAYDCKFIETSVGINHNVDELLVGLLSQIRLKLENPEKSRDLFRKRSIRKSKRRACSPLNAGCLNANTPLGPLGEAVATPPGSAQSSPRKYRGSRTSTSLKVKGLLGRVWTRDSKSKSCENLHVL
Protein: Superoxide dismutase [Cu-Zn] (EC 1.15.1.1) (Superoxide dismutase 1) (hSod1) (P00441)
Organism: Homo sapiens (Human)
Function: Destroys radicals which are normally produced within the cells and which are toxic to biological systems.
Subcellular location: Cytoplasm {ECO:0000269|PubMed:19741096}. Nucleus {ECO:0000269|PubMed:22496122}. Note=Predominantly cytoplasmic; the pathogenic variants ALS1 Arg-86 and Ala-94 gradually aggregates and accumulates in mitochondria. {ECO:0000269|PubMed:19741096}.
Interaction partners:
- Copper chaperone for superoxide dismutase
- Apoptosis regulator Bcl-2
- Parkinson disease protein 7
- Non-selective voltage-gated ion channel VDAC1
- Superoxide dismutase, mitochondrial
- RNA-binding protein FUS
- TAR DNA-binding protein 43
- Neurofilament light polypeptide
- Endoplasmic reticulum chaperone BiP
- Derlin-1
Sequence:
MATKAVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHEKADDLGKGGNEESTKTGNAGSRLACGVIGIAQ
Protein: Transmembrane protein 177 (Q53S58)
Organism: Homo sapiens (Human)
Function: Plays a role in the early steps of cytochrome c oxidase subunit II (MT-CO2/COX2) maturation and is required for the stabilization of COX20 and the newly synthesized MT-CO2/COX2 protein.
Subcellular location: Mitochondrion inner membrane {ECO:0000269|PubMed:29154948}; Multi-pass membrane protein {ECO:0000255}.
Interaction partners:
- Cytochrome c oxidase assembly protein COX20
Sequence:
MAGPLWRTAAFVQRHRTGLLVGSCAGLFGVPISYHLFPDPVVQWLYQYWPQGQPAPLPPQLQSLFQEVLQDIGVPSGHCYKPFTTFTFQPVSAGFPRLPAGAVVGIPASFLGDLVINTNHPVVIHGHTVDWRSPAGARLRASLTLSREAQKFALAREVVYLESSTTAVHALLAPACLAGTWALGVGAKYTLGLHAGPMNLRAAFSLVAAVAGFVAYAFSQDSLTHAVESWLDRRTASLSAAYACGGVEFYEKLLSGNLALRSLLGKDGEKLYTPSGNIVPRHLFRIKHLPYTTRRDSVLQMWRGMLNPGRS
Protein: U24 protein (Q69559)
Organism: Human herpesvirus 6A (strain Uganda-1102) (HHV-6 variant A) (Human B lymphotropic virus)
Function: Down-regulates the TCR/CD3E complex and the transferrin receptor TFRC in host T-cells by blocking them from recycling back to the cell surface.
Subcellular location: Membrane {ECO:0000269|PubMed:19923186}; Single-pass membrane protein {ECO:0000305}.
Interaction partners:
Sequence:
MDPPRTPPPSYSEVLMMDVMCGQVSPHVINDTSFVECIPPPQSRPAWNLWNNRRKTFSFLVLTGLAIAMILFIVFVLYVFHVNRQRR
Protein: Glycoprotein integral membrane protein 1 (Q9NU53)
Organism: Homo sapiens (Human)
Subcellular location: Membrane {ECO:0000305}; Single-pass type I membrane protein {ECO:0000305}.
Interaction partners:
Sequence:
MEGAPPGSLALRLLLFVALPASGWLTTGAPEPPPLSGAPQDGIRINVTTLKDDGDISKQQVVLNITYESGQVYVNDLPVNSGVTRISCQTLIVKNENLENLEEKEYFGIVSVRILVHEWPMTSGSSLQLIVIQEEVVEIDGKQVQQKDVTEIDILVKNRGVLRHSNYTLPLEESMLYSISRDSDILFTLPNLSKKESVSSLQTTSQYLIRNVETTVDEDVLPGKLPETPLRAEPPSSYKVMCQWMEKFRKDLCRFWSNVFPVFFQFLNIMVVGITGAAVVITILKVFFPVSEYKGILQLDKVDVIPVTAINLYPDGPEKRAENLEDKTCI
Protein: Dynein light chain 1, cytoplasmic (Q9UR05)
Organism: Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Function: Acts as one of several non-catalytic accessory components of the cytoplasmic dynein complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in changing or maintaining the spatial distribution of cytoskeletal structures (By similarity). Also a component of the nuclear pore complex (By similarity).
Subcellular location: Cytoplasm, cytoskeleton {ECO:0000250|UniProtKB:Q02647}. Nucleus, nuclear pore complex {ECO:0000250|UniProtKB:Q02647}.
Interaction partners:
- Dynein intermediate chain 1
- Dynein heavy chain, cytoplasmic
- Dynein light chain Tctex-type
- Nucleoporin nup146
- Dynein intermediate light chain dil1
Sequence:
MAVIKAVDMSEKMQQEAIHAAVQAMEKFTIEKDIAAFIKREFDKKFSPTWHCIVGRNFGSFVTHESRHFIYFYLGTVAFLLFKSG
Protein: SP110 nuclear body protein (G5E9C0)
Organism: Homo sapiens (Human)
Interaction partners:
Sequence:
MFTMTRAMEEALFQHFMHQKLGIAYAIHKPFPFFEGLLDNSIITKRMYMESLEACRNLIPVSRVVHNILTQLERTFNLSLLVTLFSQINLREYPNLVTIYRSFKRVGASYEWQSRDTPILLEAPTGLAEGSSLHTPLALPPPQPPQPSCSPCAPRVSEPGTSSQQSDEILSESPSPSDPVLPLPALIQEGRSTSVTNDKLTSKMNAEEDSEEMPSLLTSTVQVASDNLIPQIRDKEDPQEMPHSPLGSMPEIRDNSPEPNDPEEPQEVSSTPSDKKGKKRKRCIWSTPKRRHKKKSLPGASSRHGIQKKLKRVDQVPQKKDDSTCNSTVETRAQKARTECARKSRSEEIIDGTSEMNEGKRSQKTPSTPRRVTQGAASPGHGIQEKLQVVDKVTQRKDDSTWNSEVMMRVQKARTKCARKSRLKEKKKEKDICSSSKRRFQKNIHRRGKPKSDTVDFHCSKLPVTCGEAKGILYKKKMKHGSSVKCIRNEDGTWLTPNEFEVEGKGRNAKNWKRNIRCEGMTLGELLKSGLLLCPPRINLKRELNSK
Protein: Protein LSM14 homolog A (Protein FAM61A) (Protein SCD6 homolog) (Putative alpha-synuclein-binding protein) (AlphaSNBP) (RNA-associated protein 55A) (hRAP55) (hRAP55A) (Q8ND56)
Organism: Homo sapiens (Human)
Function: Essential for formation of P-bodies, cytoplasmic structures that provide storage sites for translationally inactive mRNAs and protect them from degradation. Acts as a repressor of mRNA translation. May play a role in mitotic spindle assembly.
Subcellular location: Cytoplasm, P-body {ECO:0000269|PubMed:16484376, ECO:0000269|PubMed:17074753, ECO:0000269|PubMed:32354837}. Cytoplasm, cytoskeleton, spindle {ECO:0000269|PubMed:26339800}. Cytoplasm, Stress granule {ECO:0000269|PubMed:16484376}.
Interaction partners:
- Probable ATP-dependent RNA helicase DDX6
- Enhancer of mRNA-decapping protein 3
- Eukaryotic translation initiation factor 4E transporter
- Enhancer of mRNA-decapping protein 4
- m7GpppN-mRNA hydrolase
- mRNA-decapping enzyme 1A
- U6 snRNA-associated Sm-like protein LSm1
- Protein PAT1 homolog 1
- Cytoplasmic polyadenylation element-binding protein 1
- mRNA-decapping enzyme 1B
Sequence:
MSGGTPYIGSKISLISKAEIRYEGILYTIDTENSTVALAKVRSFGTEDRPTDRPIPPRDEVFEYIIFRGSDIKDLTVCEPPKPQCSLPQDPAIVQSSLGSSTSSFQSMGSYGPFGRMPTYSQFSPSSLVGQQFGAVGVAGSSLTSFGTETSNSGTLPQSSAVGSAFTQDTRSLKTQLSQGRSSPQLDPLRKSPTMEQAVQTASAHLPAPAAVGRRSPVSTRPLPSASQKAGENQEHRRAEVHKVSRPENEQLRNDNKRQVAPGAPSAPRRGRGGHRGGRGRFGIRRDGPMKFEKDFDFESANAQFNKEEIDREFHNKLKLKEDKLEKQEKPVNGEDKGDSGVDTQNSEGNADEEDPLGPNCYYDKTKSFFDNISCDDNRERRPTWAEERRLNAETFGIPLRPNRGRGGYRGRGGLGFRGGRGRGGGRGGTFTAPRGFRGGFRGGRGGREFADFEYRKTTAFGP
Protein: Mitochondrial carrier protein (Q584Z3)
Organism: Trypanosoma brucei brucei (strain 927/4 GUTat10.1)
Subcellular location: Membrane {ECO:0000256|ARBA:ARBA00004370}.
Interaction partners:
Sequence:
MVLTTVVGGIGTTFERLHKIERQKLAVLRDPLVLVTGSMAGLAGRAVALPFDEGGNKGPKRALQRRAPQFGILMWFYVPVSARLLPGTEVNPPYKAFTTFMIGAVAGFVMRLICNPINRVSDECLRTGDSFRKTCQIFRSKTILQFFYTTPPLMVNAVYFGTLLTVFEGLRRFCERNRILPLRVERDSSGKEIINFVNHFTVGVGHTVVGGVAAAVASTVCYPLSAHFYQQTVIHDSAICRGLMPTLRKEVPMMAVSFGVFSLLQSLLARHHGPRAGFGY
Protein: Extracellular serine-rich protein, putative (AFU_orthologue AFUA_3G07870) (Q5B926)
Organism: Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) (Aspergillus nidulans)
Interaction partners:
Sequence:
MVAPTLVLQIGCFFGIFTCDTPRGVWPEGRPTVLSPWPPSPSSTSSTTSVPPAASSASTISVPTVTGPTEPTVTVTATSSASTTLTTLTTLPSPTDSATATSASTSADSTTISSTSSASDPAGSSTLVPTSEPSASEPSTSEPSSSTGTPGTSTSDPDPTSATEPSSTSTSTPEPSGTVTSSTSTSSPSTSPPSTSSTSSTSPSSTLTSTSSPSTSSTLTPSASPTPSTTVTPSPSMSVTSTSVAPSATGSLANNILVIARDSTQASVASSGLNGYGIPFTTLLVPQAGVELPALNSSSGGNFGGIVVAGEVSYDYGNDNWRSALTDDQWNQLYAYQLAYGVRMVQYDVFPGPNFGASSIGNGGCCADGVEQLVYFTDTSDFPTAGLKTGSSAGVSTSGLWHYTASVTDTNTTKAIASFASGGGVDGESVAAVINNFDGRQQMAFFIGFDTVWSQTSNYLQHAWITWITRGLHAGYRRVNLNTQIDDMFLETDIYQPSGTIFRITTDDMDGITNWLPSIRAKLNAGSTYFVEIGHNGNGNIEAGTTAAGESTCSGGAIEYDSPPDTALEFVKPIGTGTDVWPTSPTNFTWTTTCMNADSLLIWFQNHLDDYAYISHTFTHLEQNNATYSDIYKEISFNQVWLERAGFSAASKFTSNGIIPPAITGLHNGDALRAWWDNGITNCVGDNTRPVLLNSENEMWPYFTTEAADGFAGMQVNPRFATRIYYNCDTPACTTQEWIDTSAGAGDFNDLLDTERAEVLRHLFGLHRDPYMFHQANLRNVGIDPITVGSETGQFSIFQAWVETIVAEFTRLVDWPIVTITHQEMSAEFLARYTRDHCDYGLNYILDNGAITGVTVTANGNTCDANIPVTFPTAPTDTLGFATEQLGSDPFTVWAQLSGSPVTFSLATPIAL
Protein: Uncharacterized protein C9orf152 (Q5JTZ5)
Organism: Homo sapiens (Human)
Interaction partners:
Sequence:
MEGLPCPCPALPHFWQLRSHLMAEGSRTQAPGKGPPLSIQFLRAQYEGLKRQQRTQAHLLVLPKGGNTPAPAESMVNAVWINKERRSSLSLEEADSEVEGRLEEAAQGCLQAPKSPWHTHLEMHCLVQTSPQDTSHQVHHRGKLVGSDQRLPPEGDTHLFETNQMTQQGTGIPEAAQLPCQVGNTQTKAVESGLKFSTQCPLSIKNPHRSGKPAYYPFPQRKTPRISQAARNLGLYGSA
Protein: DNA topoisomerase I (EC 5.6.2.1) (DNA topoisomerase 1) (E5KMK7)
Organism: Homo sapiens (Human)
Interaction partners:
Sequence:
MRVVRLLRLRAALTLLGEVPRRPASRGVPGSRRTQKGSGARWEKEKHEDGVKWRQLEHKGPYFAPPYEPLPDGVRFFYEGRPVRLSVAAEEVATFYGRMLDHEYTTKEVFRKNFFNDWRKEMAVEEREVIKSLDKCDFTEIHRYFVDKAAARKVLSREEKQKLKEEAEKLQQEFGYCILDGHQEKIGNFKIEPPGLFRGRGDHPKMGMLKRRITPEDVVINCSRDSKIPEPPAGHQWKEVRSDNTVTWLAAWTESVQNSIKYIMLNPCSKLKGETAWQKFETARRLRGFVDEIRSQYRADWKSREMKTRQRAVALYFIDKLALRAGNEKEDGEAADTVGCCSLRVEHVQLHPEADGCQHVVEFDFLGKDCIRYYNRVPVEKPVYKNLQLFMENKDPRDDLFDRLTTTSLNKHLQELMDGLTAKVFRTYNASITLQEQLRALTRAEDSIAAKILSYNRANRVVAILCNHQRATPSTFEKSMQNLQTKIQAKKEQVAEARAELRRARAEHKAQGDGKSRSVLEKKRRLLEKLQEQLAQLSVQATDKEENKQVALGTSKLNYLDPRISIAWCKRFRVPVEKIYSKTQRERFAWALAMAGEDFEF
Protein: E3 ubiquitin-protein ligase TRIM52 (EC 2.3.2.27) (RING finger protein 102) (Tripartite motif-containing protein 52) (Q96A61)
Organism: Homo sapiens (Human)
Function: E3 ubiquitin-protein ligase. Positively regulates the NF-kappa-B signaling pathway.
Subcellular location: Cytoplasm {ECO:0000269|PubMed:28073078}. Cytoplasm, cytosol {ECO:0000269|PubMed:27667714}. Nucleus {ECO:0000269|PubMed:27667714, ECO:0000269|PubMed:28073078}.
Interaction partners:
Sequence:
MAGYATTPSPMQTLQEEAVCAICLDYFKDPVSISCGHNFCRGCVTQLWSKEDEEDQNEEEDEWEEEEDEEAVGAMDGWDGSIREVLYRGNADEELFQDQDDDELWLGDSGITNWDNVDYMWDEEEEEEEEDQDYYLGGLRPDLRIDVYREEEILEAYDEDEDEELYPDIHPPPSLPLPGQFTCPQCRKSFTRRSFRPNLQLANMVQIIRQMCPTPYRGNRSNDQGMCFKHQEALKLFCEVDKEAICVVCRESRSHKQHSVLPLEEVVQEYQEIKLETTLVGILQIEQESIHSKAYNQ
Protein: Mitochondrial ribosomal protein S27 (D6RH20)
Organism: Homo sapiens (Human)
Subcellular location: Mitochondrion {ECO:0000256|ARBA:ARBA00004173}.
Interaction partners:
Sequence:
MDKTFERKLPVSSLTISRLIDNISSREEIDHAEYYLYKFRHSPNCWYLRNWTIHTWIRQCLKYDAQDKALYTLVNKVQYGIFPDNFTFNLLMDSFIKKENYKDALSVVFEVMMQEAFEVPSTQLLSLYVLFHCLAKKTDFSWEEERNFGASLLLPGLKQKNSVGFSSQLYGYALLGKVELQQGLRAVYHNMPLIWKPGYLDRALQVMEKVAASPEDIKLCREALDVLGAVLKALTSADGASEEQSQNDEDNQGSEKLVEQLDIEETEQSKLPQYLERFKALHSKLQALGKIESEGLLSL
Protein: Amelotin (Q6UX39)
Organism: Homo sapiens (Human)
Function: Is a promoter of calcium phosphate mineralization, playing a critical role in the formation of the compact, mineralized, aprismatic enamel surface layer during the maturation stage of amelogenesis.
Subcellular location: Secreted {ECO:0000250|UniProtKB:Q9D3J8}.
Interaction partners:
- Enamelin
- Ameloblastin
- Odontogenic ameloblast-associated protein
- Amelogenin, X isoform
- Pseudokinase FAM20A
- Matrix metalloproteinase-20
- Kallikrein-4
- Extracellular serine/threonine protein kinase FAM20C
- Odontogenesis associated phosphoprotein
Sequence:
MRSTILLFCLLGSTRSLPQLKPALGLPPTKLAPDQGTLPNQQQSNQVFPSLSLIPLTQMLTLGPDLHLLNPAAGMTPGTQTHPLTLGGLNVQQQLHPHVLPIFVTQLGAQGTILSSEELPQIFTSLIIHSLFPGGILPTSQAGANPDVQDGSLPAGGAGVNPATQGTPAGRLPTPSGTDDDFAVTTPAGIQRSTHAIEEATTESANGIQ
Protein: Resistin-like beta (Cysteine-rich secreted protein A12-beta) (Cysteine-rich secreted protein FIZZ2) (RELMbeta) (Q99P86)
Organism: Mus musculus (Mouse)
Function: Probable hormone.
Subcellular location: Secreted {ECO:0000269|PubMed:11209052}.
Interaction partners:
Sequence:
MKPTLCFLFILVSLFPLIVPGNAQCSFESLVDQRIKEALSRQEPKTISCTSVTSSGRLASCPAGMVVTGCACGYGCGSWDIRNGNTCHCQCSVMDWASARCCRMA
Protein: Gamma-terpinene synthase, chloroplastic (ClgammaTS) (EC 4.2.3.114) (Q8L5K4)
Organism: Citrus limon (Lemon) (Citrus medica var. limon)
Function: Monoterpene synthase which catalyzes the conversion of geranyl diphosphate to gamma-terpinene and the minor products limonene, alpha-pinene, beta-pinene, alpha-terpinolene, alpha-thujene, alpha-terpinene, myrcene and sabinene.
Subcellular location: Plastid, chloroplast {ECO:0000305}.
Interaction partners:
Sequence:
MALNLLSSLPAACNFTRLSLPLSSKVNGFVPPITQVQYPMAASTSSIKPVDQTIIRRSADYGPTIWSFDYIQSLDSKYKGESYARQLEKLKEQVSAMLQQDNKVVDLDPLHQLELIDNLHRLGVSYHFEDEIKRTLDRIHNKNTNKSLYARALKFRILRQYGYKTPVKETFSRFMDEKGSFKLSSHSDECKGMLALYEAAYLLVEEESSIFRDAIRFTTAYLKEWVAKHDIDKNDNEYLCTLVKHALELPLHWRMRRLEARWFIDVYESGPDMNPILLELAKVDYNIVQAVHQEDLKYVSRWWKKTGLGEKLNFARDRVVENFFWTVGDIFEPQFGYCRRMSAMVNCLLTSIDDVYDVYGTLDELELFTDAVERWDATTTEQLPYYMKLCFHALYNSVNEMGFIALRDQEVGMIIPYLKKAWADQCKSYLVEAKWYNSGYIPTLQEYMENAWISVTAPVMLLHAYAFTANPITKEALEFLQDSPDIIRISSMIVRLEDDLGTSSDELKRGDVPKSIQCYMHETGVSEDEAREHIRDLIAETWMKMNSARFGNPPYLPDVFIGIAMNLVRMSQCMYLYGDGHGVQENTKDRVLSLFIDPIP
Protein: Endopolygalacturonase I (EC 3.2.1.15) (Pectinase 1) (Polygalacturonase I) (PG-I) (Q2UHL4)
Organism: Aspergillus oryzae (strain ATCC 42149 / RIB 40) (Yellow koji mold)
Function: Involved in maceration and soft-rotting of plant tissue. Hydrolyzes the 1,4-alpha glycosidic bonds of de-esterified pectate in the smooth region of the plant cell wall.
Subcellular location: Secreted {ECO:0000305}.
Interaction partners:
- Probable pectinesterase A
- Probable pectate lyase A
- Pectinesterase
- galacturonan 1,4-alpha-galacturonidasegalacturonohydrolase)
- Pectinesterase
- Probable endopolygalacturonase D
- Endopolygalacturonase B
- galacturonan 1,4-alpha-galacturonidase
- Gfo/Idh/MocA-like oxidoreductase N-terminal domain-containing protein
- Probable pectate lyase B
Sequence:
MHFQLLGLAALGSLAAAAPAPSRTSELVERGSSCTFTSAAQASASAKSCSNIVLKNIAVPAGETLDLSKAKDGATITFEGTTTFGYKEWKGPLIRFGGNKITVTQAAGAVIDGQGSRWWDGKGTNGGKTKPKFIYAHKLQSSTIKGLHVKNSPVQVFSVQGNDVHLTDITIDNSDGDNNGGHNTDAFDVSESNGVYITGANVKNQDDCLAINSGENIEFTGATCSGGHGISIGSIGNRDSNTVKNVKVADSTVVDSDNGIRIKTISGATGSVSGVTYENITLKNIKKNGIVIEQDYKNGGPTGKPTTGVPITDLTVNGVTGSVASKATPVYILCGKGSCSDWTWKGVSISGGKKSDKCQNIPSGASC
Protein: Semaphorin-3C (Collapsin-3) (COLL-3) (O42236)
Organism: Gallus gallus (Chicken)
Function: Induces the collapse and paralysis of neuronal growth cones. Could potentially act as repulsive cues toward specific neuronal populations. Binds to neuropilin.
Subcellular location: Secreted.
Interaction partners:
- Neuropilin-1
- Plexin-D1
- Uncharacterized protein.
- Plexin A2.
Sequence:
MAVLALHAVFGIFIYFSSVKGSSQPQARVFLTFNELQETKTSEYHRISHSPLDYRILLMDEDQDRIYVGSKDHILSLNINNISQDPLSIFWPASANKVEECKMAGKDPTHGCGNFVRVIQSYNRTHLYVCGSGAFSPVCVYVNRGRRSEEQIFKIDSKCESGKGRCSFNPNVNTVSVMINEELFSGMYIDFMGTDAAIFRSLTKRNAVRTDQHNSKWLSEPIFVDAHVIPDGTDPNDAKIYFFFKERLTDNSGSTKQIHSMIARICPNDTGGQRSLVNKWTTFLKARLVCSVMDEDGTETYFDELEDVFLLETDNPRTTLVYGIFTTSSSIFKGSAVCVYHLSDIQTVFNGPFAHKEGPNHQLIPYQGRIPYPRPGTCPGGAFTPNMRTTKEFPDDVVTFIRNHPLMYNPIYPIHKRPLIIRIGTDYKYTKIAVDRVNAADGRCHVLFLGTDQGTVQKVVVLPTNFSASGELILEELEVFQSNSPITTMKISSKKQQLYVSSEEGVTQVPLHRCRIYGTACADCCLARDPYCAWDGNSCSRFYPTGKRRSRRQDVRHGNPLTQCRGFNLKAYRNAAETVQYGVKNNTTFLECTPKSPQASIKWLLQKDNDRRKEVKLSERIIATEQGLLIRSVQDSDRGLYHCIATENNFKQTLAKINFKVLDTEMVAYMTDKWSPWTWASSVRALQFHPKDFVGAFSHSEMQMINQYCKDSRQQGQRREEPQKMRGDYSKLKALINSRKSRNRRNQLPAS
Protein: Cell surface protein, putative (Q4W9A9)
Organism: Aspergillus fumigatus (strain ATCC MYA-4609 / CBS 101355 / FGSC A1100 / Af293) (Neosartorya fumigata)
Interaction partners:
Sequence:
MSNMIHKVKEALTGHHGDSHTTSHGHHDSRAADKVDPRVDSDRDNRARHEAMGGTAGPHTSDTANKLDPRVDSDRDNRGNTTSGTYGSSNTYESTSNTYGSSNTYENRSNTAGPHGSNIANKLDPRVGSDADNRGLGTGTGTTSGTGAFGSGTGTGTGTTGYGTTSSNVGPHDSNIGNKLDPRVDSDQDNRARRQAMAGSSYTGAGTGTGTGATAGPHSSNIANKLDPRVDSDLDNSATMGTQRGF
Protein: Protein LURE 1.4 (AtLURE1.4) (Cysteine-Rich Peptide 810_1.4) (CRP810_1.4) (Defensin-like protein 216) (P0CAY6)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Pollen tube attractants guiding pollen tubes to the ovular micropyle.
Subcellular location: Secreted {ECO:0000269|PubMed:23271953}. Note=found at the micropylar end of the female gametophyte, possibly at the filiform apparatus of the synergid cell. Difuses to the surface of the funiculus of the ovule through the micropyle. {ECO:0000269|PubMed:23271953}.
Interaction partners:
- Pollen receptor-like kinase 5
- Pollen receptor-like kinase 4
- Pollen receptor-like kinase 3
- Pollen receptor-like kinase 6
- MDIS1-interacting receptor like kinase 1
Sequence:
MKCPSIFLTLLIFVSSCTSILINESSDEQRIYSFSPTTSPFDPRSLNQELKIGRIGYCFDCARACMRRGKYIRTCSFERKLCRCSISDIK
Protein: OPC-6:CoA ligase (EC 6.2.1.-) (4-coumarate--CoA ligase-like 4) (P0C5B6)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Contributes to jasmonic acid biosynthesis by initiating the beta-oxidative chain shortening of its precursors. Acyl-coenzyme A synthetase which exhibits a high activity specifically toward OPC-6 ((9R,13R)-1a,1b-dinor-10,11-dihydro-12-oxo-15-phytoenoate). Also capable of activating sinapic acid, a cinnamic acid derivative. Follows a two-step reaction mechanism, wherein the carboxylate substrate first undergoes adenylation by ATP, followed by a thioesterification in the presence of CoA to yield the final CoA thioester (By similarity).
Subcellular location: Peroxisome {ECO:0000305|PubMed:12819348}.
Interaction partners:
- Peroxisomal acyl-coenzyme A oxidase 1
- 12-oxophytodienoate reductase 3
- Acyl-coenzyme A oxidase 4, peroxisomal
- Acyl-coenzyme A oxidase 2, peroxisomal
- Putative acyl-coenzyme A oxidase 3.2, peroxisomal
- Acyl-coenzyme A oxidase 3, peroxisomal
- Putative acyl-coenzyme A oxidase At3g06690
- Putative peroxisomal acyl-coenzyme A oxidase 1.2
- Putative acyl-activating enzyme 19
Sequence:
MAYPERSLIVDPRSGFCKSNSTFYSKRQPLSLPPNLSRDVTTFISSQPHRGKTAFIDAATGQCLTFSDLWRAVDRVADCLYHEVGIRRGDVVLILSPNSIFIPVVCLSVMSLGAVFTTANTLNTSGEISKQIADSNPTLVFTTRQLAPKLPVAISVVLTDDEVYQELTSAIRVVGILSEMVKKEPSGQRVRDRVNQDDTAMMLYSSGTTGPSKGVISSHRNLTAHVARFISDNLKRDDIFICTVPMFHTYGLLTFAMGTVALGSTVVILRRFQLHDMMDAVEKHRATALALAPPVLVAMINDADLIKAKYDLSSLKTVRCGGAPLSKEVTEGFLEKYPTVDILQGYALTESNGGGAFTNSAEESRRYGTAGTLTSDVEARIVDPNTGRFMGINQTGELWLKGPSISKGYFKNQEATNETINLEGWLKTGDLCYIDEDGFLFVVDRLKELIKYKGYQVPPAELEALLITHPDILDAAVIPFPDKEAGQYPMAYVVRKHESNLSEKQVIDFISKQVAPYKKIRKVSFINSIPKTASGKTLRKDLIKLATSKL
Protein: F-box/kelch-repeat protein At4g39240 (Q9T031)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Interaction partners:
Sequence:
MPFSAASSSSVSSIAEEPPPKKQHDPSPSCSSYLLLLPDEIILNCLARLPKCYYPVISLVSKTFRRLIASPEIYVERSLLRRTERVLYVVLRSHATETPRWYTLNFKPFGNDSNNHRLVPIPSFPSIPCWGMSIVAIDSEIYVLGGCIDNELVSTGFVVECPSHTCRLLPSMKQARGCAAVGFFDGKLYVIGGCNPLSVNWVEAFDLKTQTWESGLGVNNVEMHDLTIRSFAIDDKIYIMDRKNSFVYDPKEGTLETDELLDTQWSVGSCVIDGKIYTFGSKNRIWVFDPIAMVWDRLKGLDDLPDKRDGSRMSNLGGNLAIMFNLEKGSTKICCTEIRLERREGGKIWGTVLWSNIVITLKEPSTIVRCLTVTV
Protein: KH domain containing RNA-binding protein FMR1 (Synaptic functional regulator FMR1) (Q9DF20)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Subcellular location: Cell projection, dendrite {ECO:0000256|ARBA:ARBA00004279}. Cell projection, dendritic spine {ECO:0000256|ARBA:ARBA00004552}. Cell projection, filopodium tip {ECO:0000256|ARBA:ARBA00004495}. Cell projection, growth cone {ECO:0000256|ARBA:ARBA00004624}. Chromosome, centromere {ECO:0000256|ARBA:ARBA00004584}. Cytoplasm, Stress granule {ECO:0000256|ARBA:ARBA00004210}. Cytoplasm, perinuclear region {ECO:0000256|ARBA:ARBA00004556}. Nucleus, nucleolus {ECO:0000256|ARBA:ARBA00004604}. Perikaryon {ECO:0000256|ARBA:ARBA00004484}. Presynaptic cell membrane {ECO:0000256|ARBA:ARBA00034111}. Synapse, synaptosome {ECO:0000256|ARBA:ARBA00034102}.
Interaction partners:
Sequence:
MDELAVEVRGASGAFYKAYIKDVHESTVTVAFENNWQPERQISFQDVRFPPPTGFQKEINESDEVEVYSRANDKEPCGWWLAKVRMVKGEFYVIEYAACDATLNEIVTLERLRPVNPNKAATKNTFLKTRLDVPEDLRQMCAKDSAHKDFKKAIGAFNVTYDSEEKQLVILSVNEVTAKRISMLSDMHFRSLRTKLALILRNEEATRQLESSRQLASRFHEQFVERDDLMGLAIGTHGANIQQARKISGVTTIDLDEETCTFHIYGEDQEAVRKARSYLEFSEDVIKVPRNLVGKVIGKSGKLIQEVVDKSGVVRVRVEPENDKKPSPLEEGMVPFVFVGTKESISNARILLDYHLNYLKEVDQLRMERLQIDEQLRQIGGGPRALPGRPEKEKSFMADNGMGPSRGGGKPFGRGGRGRRGPTLASGTNSEASNASETESDHRDELSDWSLAPTDEESMGYPKRAPDGRKRGGGPRGRGGRGRGGYKTEDMHWNDSRSRSSRDSKLRPQEESRQIRIDSNNERSIHTSRSSQAMAGARGGNRQRPIKERVMKKEKQDGSDSQAVVNGVS