wanglab/gogpt-training-data huggingface dataset:
Protein: DDRGK domain-containing protein 1 (Ufm-binding protein 1) (P34623)
Organism: Caenorhabditis elegans
Subcellular location: Endoplasmic reticulum membrane {ECO:0000250|UniProtKB:Q96HY6}; Single-pass membrane protein {ECO:0000250|UniProtKB:Q96HY6}.
Interaction partners:
- E3 UFM1-protein ligase 1 homolog
- Ubiquitin-fold modifier-conjugating enzyme 1
- Ubiquitin-fold modifier 1
- CDK5RAP3 protein homolog
- Ufm1-specific protease
- Ubiquitin-like modifier-activating enzyme 5
- Peroxisomal membrane protein PEX14
Sequence:
MDPLLLGSVGVLVLAVTLIIWRLLKLQWDEKAARQRTDMLLAMNEGAGGSDERRGANVAGGMRRNARRRVNRDEQEDGFVNHMMNDGEDVEDLDGGAEQFEYDEDGKKIGKRKAAKLQAKEEKRQMREYEVREREERKRREEEREKKRDEERAKEEADEKAEEERLRKEREEKERKEHEEYLAMKASFAIEEEGTDAIEGEEAENLIRDFVDYVKTNKVVNIDELSSHFGLKSEDAVNRLQHFIEEGLVQGVMDDRGKFIYISDEEFAAVAKFINQRGRVSIHEIAEQSNRLIRLETPSAAE
Protein: Spermatogenesis- and oogenesis-specific basic helix-loop-helix-containing protein 1 (Q5JUK2)
Organism: Homo sapiens (Human)
Function: Transcription regulator of both male and female germline differentiation. Suppresses genes involved in spermatogonial stem cells maintenance, and induces genes important for spermatogonial differentiation. Coordinates oocyte differentiation without affecting meiosis I (By similarity).
Subcellular location: Cytoplasm {ECO:0000250|UniProtKB:Q6IUP1}. Nucleus {ECO:0000250|UniProtKB:Q6IUP1, ECO:0000255|PROSITE-ProRule:PRU00981}.
Interaction partners:
- LIM/homeobox protein Lhx8
- Factor in the germline alpha
- Homeobox protein NOBOX
- Spermatogenesis- and oogenesis-specific basic helix-loop-helix-containing protein 2
- Y-box-binding protein 2
- Homeobox protein GBX-1
- Stimulated by retinoic acid gene 8 protein homolog
Sequence:
MASRCSEPYPEVSRIPTVRGCNGSLSGALSCCEDSARGSGPPKAPTVAEGPSSCLRRNVISERERRKRMSLSCERLRALLPQFDGRREDMASVLEMSVQFLRLASALGPSQEQHAILASSKEMWHSLQEDVLQLTLSSQIQAGVPDPGTGASSGTRTPDVKAFLESPWSLDPASASPEPVPHILASSRQWDPASCTSLGTDKCEALLGLCQVRGGLPPFSEPSSLVPWPPGRSLPKAVRPPLSWPPFSQQQTLPVMSGEALGWLGQAGPLAMGAAPLGEPAKEDPMLAQEAGSALGSDVDDGTSFLLTAGPSSWPGEWGPGFRAGPPA
Protein: Phasin PhaP (GA13) (P73545)
Organism: Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
Function: A phasin, it attaches to the polyhydroxybutyrate (PHB) granule surface regulating the number and size of PHB granules within a cell. It probably also acts as a regulator affecting the biosynthetic activity of PHB synthase in vivo.
Subcellular location: Cellular thylakoid membrane {ECO:0000305|PubMed:16287171}; Peripheral membrane protein {ECO:0000305|PubMed:16287171}; Cytoplasmic side {ECO:0000305|PubMed:16287171}. Cytoplasm {ECO:0000269|PubMed:25911471}. Note=Distributed in cytoplasm during photoautotrophic growth, insoluble and associated with polyhydroxybutyrate (PHB) granules under nitrogen starvation (PubMed:25911471, PubMed:9683655). {ECO:0000269|PubMed:25911471, ECO:0000269|PubMed:9683655}.
Interaction partners:
Sequence:
MNTQFFEEYQTQLLDWQKKFFSTWMESLPKGTAEIKLTDTFETSLKLQEEMVKSYLEAQEKSATMMIDAQKQFWDNYFQALRQEPVSAN
Protein: PTPRF interacting protein alpha 2 (A0A8I6AK94)
Organism: Rattus norvegicus (Rat)
Interaction partners:
Sequence:
MMCEVMPTINEDTPMSQRGSQSSGSDSDSHFEQLMVNMLDERDRLLDTLRETQESLSLAQQRLQDVIYDRDSLQRQLNSALPQDIESLTGGLTGSKGADPPEFAALTKELNACREQLLEKEEEISELKAERNNTRLLLEHLECLVSRHERSLRMTVVKRQAQSPSGVSSEVEVLKALKSLFEHHKALDEKVRERLRVSLERVSALEEELAAANQEIVALREQNVHIQRKMVSSEGSTESEHLDGMEPGQKVHEKRLSNGSIDSTDDTSQIVELQELLEKQNYEMAQMKDRLAALSSRVGEVEQEAETARKDLIKTEEMNTKYQRDIRECYLQAMAQKEDMEERITTLEKRYLSAQRESTSIHDMNDKLENELANKEAILRQMEEKNRQLQERLELAEQKLQQTMRKAETLPEVEAELAQRIAALTKAEERHGNIEERMRHLEGQLEEKNQELQRARQREKMNEEHNKRLSDTVDRLLTESNERLQLHLKERMAALEEKNVLIQESETFRKNLEESLHDKERLAEEIEKLRSELDQMKMRTGSLIEPTISRTHLDTSAELRYSVGSLVDSQSDYRTTKVIRRPRRGRMGVRRDEPKVKSLGDHEWNRTQQIGVLGSHPFESDTEMSDIDDDDRETIFSSMDLLSPSGHSDAQTLAMMLQEQLDAINKEIRLIQEEKESTELRAEEIENRVASVSLEGLNLARVHPGTSITASVTASSLASSSPPSGHSTPKLTPRSPAREMDRMGVMTLPSDLRKHRRKIAVVEEDGREDKATIKCETSPPPTPRAIRMTHTLPSSYHNEARSSLSASLEPDRLGLGSANSSQDSLHKAPKKKGIKSSIGRLFGKKEKARLGQLRGFMETEAAAQESLGLGKLGTQAEKDRRLKKKHELLEEARRKGLPFAQWDGPTVVAWLELWLGMPAWYVAACRANVKSGAIMSALSDTEIQREIGISNPLHRLKLRLAIQEMVSLTSPSAPPTSRTPSGNVWVTHEEMENLAAPAKTKESEEGSWAQCPVFLQTLAYGDMNHEWIGNEWLPSLGLPQYRSYFMECLVDARMLDHLTKKDLRVHLKMVDSFHRTSLQYGIMCLKRLNYDRKELERRREASQHEIKDVLVWSNDRVIRWIQAIGLREYANNILESGVHGSLIALDENFDYSSLALLLQIPTQNTQARQILEREYNNLLALGTERRLDESDDKNFRRGSTWRRQFPPREVHGISMMPGSSETLPAGFRLTTTSGQSRKMTTDVASSRLQRLDNSTVRTYSC
Protein: Low-affinity Fe(2+) transport protein (Low-affinity Fe(II) transport protein) (P40988)
Organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Function: Required for Fe(2+) ion low affinity uptake.
Subcellular location: Membrane; Multi-pass membrane protein.
Interaction partners:
- Iron transport multicopper oxidase FET3
- Plasma membrane iron permease
- Copper transport protein CTR2
- Ferric/cupric reductase transmembrane component 1
- Copper transport protein CTR3
- Zinc-regulated transporter 2
- Zinc-regulated transporter 1
- Manganese transporter SMF1
- Zinc-regulated transporter 3
- Cytochrome c oxidase copper chaperone
Sequence:
MGKIAEFLGNPGARPDVHHRAPTVDCKQYEEFGDSNDYKNDDVVRVVSHSDESTDDELCNVNLTETGAIFTSKGFTGLSKGFTDKTLDFLVRVAGSQAVFFIVWIILIIWVVIGIVYNAPFNWQVVMQDGQSIQSYVWDTLLMRQQLMSTHEQILICGRLKSRLASFKNYLTRSTPEEEKADCTVEANEVSSVENHIDPSAINGELPVENWYDRLSNVASRYMGSIAAMVIFWIGIFVWIGCGAIPKDAGNTPPYTGETTGSNPRLKKFSDAWQMYINTAVAVSLLICTTFLQNIRARHDYFTGRFLVDIFDMDEKIDYRIRKHFNDFETPHPVVTIESKKRSTGRKMIDWYADIIGTGIGVLIGVAVFATWIGIGSPMKWDDNWWLIIGTYTGLIGFLDGFVLREVYFRIVQHEEKNYSDVAKEDLELFQELGIECPEEFSGKAPEINTIGYRTSQYINRICSTPWSVLVSVIIIIGLICIASGLRWSTTGQLIANTPTMIIEEFFLLVLLQAHNWADRQRRVEVTALYARRRILLSYVEKRFPEVMMLEK
Protein: Pyruvate kinase (EC 2.7.1.40) (Q74JM7)
Organism: Lactobacillus johnsonii (strain CNCM I-12250 / La1 / NCC 533)
Interaction partners:
Sequence:
MKKTKIVSTLGPASNDVETITKLAEAGANVFRFNFSHGDHEEHRARMNMVREVEKKTGKLLGIALDTKGAEIRTTEQEGGKFTINTGDTIRISMDDTKKGNKDMIHVTYDGLYDDTHVGGHVLIDDGLVDLLIKDKDDAKRELVCEAQNTGVIGSKKGVNAPGVEIRLPGITEKDTNDIKFGLKEGINFIFASFVRKAQDVLDIRQLLEEAHCEYVKIFPKIESQEGIDNIDEILKVSDGLMVARGDMGVEIPFINVPFVQKELIKRCNALGKPVITATQMLDSMQENPRPTRAEVTDVANAVLDGTDATMLSGESANGLYPVKAVKAMAEIDMRTEKQLAKRNKLALQRFEEYKGSNVTEAIGESVVRTAEELGVKTIIAATESGYTARMISKYRPNADIIAMTFNDKIQHSLGVVWGVKPMLTEKPKSTEEMFEKAAELAKETGLAKDGDLVIIVAGVPLGETGTTNLMKLQLIGTQLVKGLGVGEQSVIGKAVVATSAEEANSKVQDGDILVAKTTDKDYLPAIKKASGMVVEASGLTSHAAVVGLSLGIPVIVGATDAVEKIKDGSKITVDARRGAVYQGEATNL
Protein: Photoactivated adenylate cyclase subunit beta (EC 4.6.1.1) (Photoactivated adenylyl cyclase subunit beta) (Q76L33)
Organism: Euglena longa (Euglenophycean alga) (Astasia longa)
Function: Acts as a photoreceptor for the step-up photophobic response.
Subcellular location: Cell projection, cilium, flagellum {ECO:0000269|PubMed:16121285}.
Interaction partners:
Sequence:
MYILVWKRGQQIKTFHTLDEAANFKAASNIDEAQMFSITVAPAISASGGSNEATNLRRLMYLSKSTNPEECNPQFLAEMARVATLRNREIGVSGFLMYSSPFFFQVIEGTDEDLDFLFAKISADPRHERCIVLANGPCTGRMYGDWHMKDSHIDSITTHPAMKTILYQIARSFSSMWSYLPKSAGNMLLLGKDPAAQPPEPMSVVVTFIYLVEFGSILSNPNLTEQAAEVLSTFVDVCVKNVEGSGGNIAKFITGICMAYWPINRTEDALNAIQQISEDLAQLRSQQAPGSAISLMYSQAGVHYGRAMLCNAGSRKSDFTLLGDCINTTSRIATLAKKLKTPLLFSFEVRCLLGDEMREEVEGAGMHQVKGRDKPVVVYQFPGPELDVEMVRQKIEHFTPGRFRCQMPVVEYESLPISQRPPIFDDTPKGKPRPRTPGYGGRQRSDSLVDRLIMIAKLAGPSISATGDSTLTTLTYISQATRPMSRLDLSAIMRTATRRNAQLSITGTLLYVNGLFVQTLEGPKDAMVNLYLKIRQDPRHTDVVTVHMAPIQERAYPAEWTLTSATEEMLATFPPLQDVLSQLAKSFTSLETYVPSTVVRYLTAGNNPRNLMPVSCGVVMLATDICSFTSLTEKSSLTEVWMICNTFIDACTSAICQEGGEVIKLIGDCVTAYFPGNGADSAVAAAQELFTFCRQLREAFVDVLDVRGCVSCGVGLDYGQVVMAQCGSLGLTEYVVAGAVSARVMEVESITREVGYAIVITEPVADRLSPQLRDHGIIPTPQAIEGLPCYGIAGEEFELDVDSIKRGIKALHAARSGEKPLALEPEEAKQDYRVSPGRMRHGDSGRRSNSAQGKRSTQVR
Protein: PHD finger protein ALFIN-LIKE 2 (Protein AL2) [Cleaved into: PHD finger protein ALFIN-LIKE 2, N-terminally processed] (Q9SRM4)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Histone-binding component that specifically recognizes H3 tails trimethylated on 'Lys-4' (H3K4me3), which mark transcription start sites of virtually all active genes.
Subcellular location: Nucleus {ECO:0000269|PubMed:19154204}.
Interaction partners:
- Putative E3 ubiquitin-protein ligase RING1a
- E3 ubiquitin protein ligase DRIP1
- Adenylate kinase 1, chloroplastic
- PHD finger family protein / SWIB complex BAF60b domain-containing protein / GYF domain-containing protein
- Adenosine kinase 2
- Protein TRAUCO
- Protein RBL
- Multiple organellar RNA editing factor 1, mitochondrial
- Adenosine kinase 1
- SNF1-related protein kinase catalytic subunit alpha KIN11
Sequence:
MAAAAVSSNPRTVEEIFKDYSARRAALLRALTKDVDDFYSQCDPEKENLCLYGHPNESWEVNLPAEEVPPELPEPALGINFARDGMQRKDWLSLVAVHSDCWLLSVSFYFGARLNRNERKRLFSLINDLPTLFDVVTGRKAMKDNKPSSDSGSKSRNGTKRSIDGQTKSSTPKLMEESYEEEEEEDEHGDTLCGSCGGHYTNEEFWICCDVCERWYHGKCVKITPAKAESIKQYKCPPCCAKKGRQ
Protein: Protein kinase C and casein kinase substrate in neurons protein 1 (Dynamin proline-rich domain-interacting protein) (Dynamin PRD-interacting protein) (Synaptic, dynamin-associated protein I) (Syndapin-1) (Syndapin-I) (SdpI) (Q9Z0W5)
Organism: Rattus norvegicus (Rat)
Function: Binds to membranes via its F-BAR domain and mediates membrane tubulation. Plays a role in the reorganization of the microtubule cytoskeleton via its interaction with MAPT; this decreases microtubule stability and inhibits MAPT-induced microtubule polymerization. Plays a role in cellular transport processes by recruiting DNM1, DNM2 and DNM3 to membranes. Plays a role in the reorganization of the actin cytoskeleton and in neuron morphogenesis via its interaction with COBL and WASL, and by recruiting COBL to the cell cortex. Plays a role in the regulation of neurite formation, neurite branching and the regulation of neurite length. Required for normal synaptic vesicle endocytosis; this process retrieves previously released neurotransmitters to accommodate multiple cycles of neurotransmission. Required for normal excitatory and inhibitory synaptic transmission.
Subcellular location: Cytoplasm. Cell projection. Synapse, synaptosome. Cell projection, ruffle membrane {ECO:0000250}. Membrane; Peripheral membrane protein. Cytoplasmic vesicle membrane {ECO:0000250}; Peripheral membrane protein {ECO:0000250}. Synapse {ECO:0000250}. Cytoplasm, cytosol {ECO:0000250}. Cell membrane; Peripheral membrane protein; Cytoplasmic side. Note=Colocalizes with MAPT in axons (By similarity). In primary neuronal cultures, present at a high level in presynaptic nerve terminals and in the cell body. Colocalizes with DNM1 at vesicular structures in the cell body and neurites. {ECO:0000250}.
Interaction partners:
- Protein kinase C and casein kinase substrate in neurons 3
- Protein kinase C and casein kinase substrate in neurons 2 protein
- Protein cordon-bleu
- Dynamin-1
- Synaptojanin-1
- Actin nucleation-promoting factor WASL
- Huntingtin
Sequence:
MSGPYDEASEEITDSFWEVGNYKRTVKRIDDGHRLCNDLMSCVQERAKIEKAYAQQLTDWAKRWRQLIEKGPQYGSLERAWGAMMTEADKVSELHQEVKNSLLNEDLEKVKNWQKDAYHKQIMGGFKETKEAEDGFRKAQKPWAKKMKELEAAKKAYHLACKEEKLAMTREMNSKTEQSVTPEQQKKLVDKVDKCRQDVQKTQEKYEKVLEDVGKTTPQYMEGMEQVFEQCQQFEEKRLVFLKEVLLDIKRHLNLAENSSYIHVYRELEQAIRGADAQEDLRWFRSTSGPGMPMNWPQFEEWNPDLPHTAAKKEKQPKKAEGAALSNATGAVESTSQAGDRGSVSSYDRGQAYATEWSDDESGNPFGGNEANGGANPFEDDAKGVRVRALYDYDGQEQDELSFKAGDELTKLGEEDEQGWCRGRLDSGQLGLYPANYVEAI
Protein: Transferrin-binding protein B (TbpB) (Surface lipoprotein TbpB) (Transferrin-binding protein 2) (TBP-2) (Q9K0V0)
Organism: Neisseria meningitidis serogroup B (strain ATCC BAA-335 / MC58)
Function: Neisseria acquires iron by extracting it from serum transferrin (TF) in its human host. Acts as a TF receptor and is required for TF utilization. Involved in the initial capture of TF. Helps select only those TF molecules that can be used as an iron source and concentrates them on the cell surface, maintaining the iron-loaded status of the TF C-terminal lobe until its delivery to TbpA.
Subcellular location: Cell outer membrane {ECO:0000305|PubMed:27572441}; Lipid-anchor {ECO:0000305}. Cell surface {ECO:0000269|PubMed:27572441}. Note=Requires Slam1 for surface expression in E.coli. {ECO:0000269|PubMed:27572441}.
Interaction partners:
- Transferrin-binding protein A
- Lactoferrin-binding protein A
- Hemoglobin receptor
- Major outer membrane protein P.IB
Sequence:
MNNPLVNQAAMVLPVFLLSACLGGGGSFDLDSVDTEAPRPAPKYQDVFSEKPQAQKDQGGYGFAMRLKRRNWYPQAKEDEVKLDESDWEATGLPDEPKELPKRQKSVIEKVETDSDNNIYSSPYLKPSNHQNGNTGNGINQPKNQAKDYENFKYVYSGWFYKHAKREFNLKVEPKSAKNGDDGYIFYHGKEPSRQLPASGKITYKGVWHFATDTKKGQKFREIIQPSKSQGDRYSGFSGDDGEEYSNKNKSTLTDGQEGYGFTSNLEVDFHNKKLTGKLIRNNANTDNNQATTTQYYSLEAQVTGNRFNGKATATDKPQQNSETKEHPFVSDSSSLSGGFFGPQGEELGFRFLSDDQKVAVVGSAKTKDKPANGNTAAASGGTDAAASNGAAGTSSENGKLTTVLDAVELKLGDKEVQKLDNFSNAAQLVVDGIMIPLLPEASESGNNQANQGTNGGTAFTRKFDHTPESDKKDAQAGTQTNGAQTASNTAGDTNGKTKTYEVEVCCSNLNYLKYGMLTRKNSKSAMQAGESSSQADAKTEQVEQSMFLQGERTDEKEIPSEQNIVYRGSWYGYIANDKSTSWSGNASNATSGNRAEFTVNFADKKITGTLTADNRQEATFTIDGNIKDNGFEGTAKTAESGFDLDQSNTTRTPKAYITDAKVQGGFYGPKAEELGGWFAYPGDKQTKNATNASGNSSATVVFGAKRQQPVR
Protein: Alanine racemase, catabolic (EC 5.1.1.1) (Q9HTQ2)
Organism: Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Function: Isomerizes L-alanine to D-alanine which is then oxidized to pyruvate by DadA.
Interaction partners:
- D-amino acid dehydrogenase 1
- D-alanine--D-alanine ligase A
- D-alanine--D-alanine ligase B
- UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
- RidA family protein
- Alanine racemase, biosynthetic
- Glycolipid-binding domain-containing protein
- Glutamate-pyruvate aminotransferase AlaA
- Glycine oxidase
Sequence:
MRPARALIDLQALRHNYRLAREATGARALAVIKADAYGHGAVRCAEALAAEADGFAVACIEEGLELREAGIRQPILLLEGFFEASELELIVAHDFWCVVHCAWQLEAIERASLARPLNVWLKMDSGMHRVGFFPEDFSAAHERLRASGKVAKIVMMSHFSRADELDCPRTEEQLAAFAAASQGLEGEISLRNSPAVLGWPKVPSDWVRPGILLYGATPFERAHPLADRLRPVMTLESKVISVRDLPAGEPVGYGARYSTERSQRIGVVAMGYADGYPRHAADGTLVFIDGKPGRLVGRVSMDMLTVDLTDHPQAGLGSRVELWGPNVPVGALAAQFGSIPYQLLCNLKRVPRVYSGA
Protein: Protein BCP1 (Q06338)
Organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Function: Involved in nuclear export of the lipid kinase MSS4 and of the 60S ribosomal subunit. May also play a role in directing MSS4 to the plasma membrane. Plays a role in actin cytoskeleton organization and vesicular transport.
Subcellular location: Cytoplasm {ECO:0000269|PubMed:12912920}. Nucleus {ECO:0000269|PubMed:12912920}.
Interaction partners:
- Large ribosomal subunit protein uL14A
- Ribosomal lysine N-methyltransferase 1
- 20S rRNA accumulation protein 4
- Ribosome assembly protein RRB1
- Synchronized import protein 1
- Assembly chaperone of RPL4
- Importin subunit beta-4
- Pre-rRNA-processing protein TSR2
- Ribosome biogenesis protein RPF2
- Ankyrin repeat-containing protein YAR1
Sequence:
MVQAIKLNDLKNRKRKNVEEENGSDESEIDISSTDSENEEEQNGEEEIVNIDFDFFGGNPEVDFHALKNLLRQLFGPQESTRIQLSSLADLILGSPTTTIKTDGKESDPYCFLSFVDFKANHLSDYVKYLQKVDMRLSTFFKTMIDSGNKNCALVLSERLINMPPEVVPPLYKITLEDVATALGDDKHYDFYIIVTRKYEVNFDTDDDTDSGKRNKNKDERSKKRVKADEVDYFHEEDRFFEKYAKIHFESEAKKGVISSYMILDHEGLVKSIDELETEISTW
Protein: NADP-dependent malic enzyme, mitochondrial (NADP-ME) (EC 1.1.1.40) (Malic enzyme 3) (Q16798)
Organism: Homo sapiens (Human)
Function: Catalyzes the oxidative decarboxylation of (S)-malate to pyruvate using NADP(+) as a cofactor. Can also reverse the decarboxylation reaction, but only with significantly lower efficiency.
Subcellular location: Mitochondrion matrix.
Interaction partners:
- Pyruvate carboxylase, mitochondrial
- Fumarate hydratase, mitochondrial
- Malate dehydrogenase, mitochondrial
- Pyruvate kinase PKLR
- Citrate synthase, mitochondrial
- Pyruvate kinase PKM
- L-lactate dehydrogenase A-like 6B
- L-lactate dehydrogenase A-like 6A
- L-lactate dehydrogenase C chain
- Pyruvate dehydrogenase E1 component subunit beta, mitochondrial
Sequence:
MGAALGTGTRLAPWPGRACGALPRWTPTAPAQGCHSKPGPARPVPLKKRGYDVTRNPHLNKGMAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQQSDLDKYIILMTLQDRNEKLFYRVLTSDVEKFMPIVYTPTVGLACQHYGLTFRRPRGLFITIHDKGHLATMLNSWPEDNIKAVVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGVNPQQCLPVLLDVGTNNEELLRDPLYIGLKHQRVHGKAYDDLLDEFMQAVTDKFGINCLIQFEDFANANAFRLLNKYRNKYCMFNDDIQGTASVAVAGILAALRITKNKLSNHVFVFQGAGEAAMGIAHLLVMALEKEGVPKAEATRKIWMVDSKGLIVKGRSHLNHEKEMFAQDHPEVNSLEEVVRLVKPTAIIGVAAIAGAFTEQILRDMASFHERPIIFALSNPTSKAECTAEKCYRVTEGRGIFASGSPFKSVTLEDGKTFIPGQGNNAYVFPGVALGVIAGGIRHIPDEIFLLTAEQIAQEVSEQHLSQGRLYPPLSTIRDVSLRIAIKVLDYAYKHNLASYYPEPKDKEAFVRSLVYTPDYDSFTLDSYTWPKEAMNVQTV
Protein: Prolactin (PRL) (P17572)
Organism: Meleagris gallopavo (Wild turkey)
Subcellular location: Secreted.
Interaction partners:
Sequence:
MSNTGASLKGLLLAVLLVSNMLLTKEGVTSLPICSSGSVNCQVSLGELFDRAVRLSHYIHFLSSEIFNEFDERYAQGRGFITKAVNGCHTSSLTTPEDKEQTQQIHHEELLNLILGVLRSWNDPLIHLASEVQRIKEAPDTILWKAVEIEEQNKRLLEGMEKIVGRIHSGDAGNEVFSQWDGLPSLQLADEDSRLFAFYNLLHCLRRDSHKIDNYLKVLKCRLIHDNNC
Protein: Syntaxin-3 (Q13277)
Organism: Homo sapiens (Human)
Function: Potentially involved in docking of synaptic vesicles at presynaptic active zones. Apical receptor involved in membrane fusion of apical vesicles.
Subcellular location: [Isoform A]: Apical cell membrane {ECO:0000269|PubMed:24726755}; Single-pass type IV membrane protein {ECO:0000305}. Note=Localized to the inner and outer plexiform layers, the cell body and the inner segments of photoreceptors. {ECO:0000250|UniProtKB:Q64704}.; SUBCELLULAR LOCATION: [Isoform 3]: Nucleus {ECO:0000269|PubMed:29475951}.
Interaction partners:
- Vesicle-associated membrane protein 8
- Synaptosomal-associated protein 23
- Vesicle-associated membrane protein 2
- Vesicle-associated membrane protein 3
- Syntaxin-binding protein 1
- Vesicle-associated membrane protein 4
- Synaptosomal-associated protein 29
- Vesicle-associated membrane protein 7
- Syntaxin-6
- Synaptosomal-associated protein 25
Sequence:
MKDRLEQLKAKQLTQDDDTDAVEIAIDNTAFMDEFFSEIEETRLNIDKISEHVEEAKKLYSIILSAPIPEPKTKDDLEQLTTEIKKRANNVRNKLKSMEKHIEEDEVRSSADLRIRKSQHSVLSRKFVEVMTKYNEAQVDFRERSKGRIQRQLEITGKKTTDEELEEMLESGNPAIFTSGIIDSQISKQALSEIEGRHKDIVRLESSIKELHDMFMDIAMLVENQGEMLDNIELNVMHTVDHVEKARDETKKAVKYQSQARKKLIIIIVLVVVLLGILALIIGLSVGLN
Protein: Small ribosomal subunit protein uS8c (30S ribosomal protein S8, chloroplastic) (P0C492)
Organism: Oryza sativa (Rice)
Function: One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit.
Subcellular location: Plastid, chloroplast.
Interaction partners:
Sequence:
MGKDTIADLLTSIRNADMNKKGTVRVVSTNITENIVKILLREGFIESVRKHQESNRYFLVSTLRHQKRKTRKGIYRTRTFLKRISRPGLRIYANYQGIPKVLGGMGIAILSTSRGIMTDREARLNRIGGEVLCYIW
Protein: Deazaflavin-dependent nitroreductase family protein (A0R4Y6)
Organism: Mycolicibacterium smegmatis (strain ATCC 700084 / mc(2)155) (Mycobacterium smegmatis)
Interaction partners:
- F420-dependent glucose-6-phosphate dehydrogenase
- Site-specific recombinase XerC
- Acetyl-CoA acetyltransferase
- Phosphoenolpyruvate transferase
- Bifunctional F420 biosynthesis protein FbiB
- FO synthase
- Pyridoxamine 5'-phosphate oxidase family protein
- Pyridoxamine 5'-phosphate oxidase-related, FMN-binding
- Oxidoreductase
- Acyl-CoA dehydrogenase
Sequence:
MADTSRPLNAKQLERLNAKSTGTLIKWMSRFQTFLFKTTNGKLGNKFLRGTEVGILTTIGRKSGEPRDTPLLFLQEGRRIVLVASQGGRATNPMWYLNLKANPKVTFQTRSEKLALVAREATDAERDEYWPKLDAMYPDFANYRSYTDRKIPIVICDPA
Protein: Delta-6 fatty acyl desaturase (D2Y363)
Organism: Salmo salar (Atlantic salmon)
Subcellular location: Membrane {ECO:0000256|ARBA:ARBA00004141}; Multi-pass membrane protein {ECO:0000256|ARBA:ARBA00004141}.
Interaction partners:
Sequence:
AALVQDFQALRDHVESEGLLRARLLFFSLYLGHILLLEALALGLLWVWGTSWSLTLLCSLMLATSQSQAGWLQHDFGHLSVFKKSSWNHVLQKFVIGHLKGASANWWNHRHFQHHAKPNVFSKDPDVNSLHVFVLGDKQPVEYGIKKLKYMPYHHQHQYFFLIGPPLLIPVYFHIQILRTMFLRQDWVDLAWSMSFYLRFFCCYYPFFGFFGSVALISFVRFLESHWFVWVTQMNHLPMEMDHERHQDWLTMQLSATCNIEQSTFNDWFSGHLNFQIEHHLFPTMPRHNYHLVAPLVRALCEKHGVPYQVKTMQQGLTDVVRSLKKSGDLWLDAYLHK
Protein: Mitochondrial holo-[acyl-carrier-protein] synthase (Mitochondrial holo-ACP synthase) (EC 2.7.8.7) (4'-phosphopantetheinyl transferase PPT2) (PPTase) (Q12036)
Organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Function: Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of mitochondrial acyl-carrier-protein.
Subcellular location: Mitochondrion {ECO:0000269|PubMed:16823961}.
Interaction partners:
- Dephospho-CoA kinase CAB5
- Serine/threonine-protein phosphatase T
Sequence:
MSFASRNIGRKIAGVGVDIVYLPRFAHILEKYSPFDPCGRSTLNKITRKFMHEKERFHFSNLLIEENCLTPRLHEYIAGVWALKECSLKALCCCVSKHDLPPAQVLYAGMLYKTQTDTGVPQLEFDKMFGKKYPKYQQLSKNYDSLFSTHEFLVSLSHDKDYLIAVTNLVERE
Protein: Myogenin (Q9DG26)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Subcellular location: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
Interaction partners:
Sequence:
MELFETNPYFFNDQRFYEGADNFFQSRINGGFEQAGYQDRNSMMGLCGDGRMLTTTVGLEDKPSPSSSLGLSMSPHQEQQHCPGQCLPWACKVCKRKSVTMDRRKAATLREKRRLKKVNEAFEALKRSTLMNPNQRLPKVEILRSAIQYIERLQALVSSLNQQEHEQGNLHYRATAAAPHTGVSSSSDQGSGSTCCSSPEWSSASDHCVPAYSSAHEDLLNDDSSEQSNLRSLTSIVDSITGTEATPVAYSVDISK
Protein: Keratin-associated protein 4-9 (Keratin-associated protein 4.9) (Ultrahigh sulfur keratin-associated protein 4.9) (Q9BYQ8)
Organism: Homo sapiens (Human)
Function: In the hair cortex, hair keratin intermediate filaments are embedded in an interfilamentous matrix, consisting of hair keratin-associated proteins (KRTAP), which are essential for the formation of a rigid and resistant hair shaft through their extensive disulfide bond cross-linking with abundant cysteine residues of hair keratins. The matrix proteins include the high-sulfur and high-glycine-tyrosine keratins.
Interaction partners:
Sequence:
MVSSCCGSVCSDQGCGQDLCQETCCRPSCCETTCCRTTCCRPSCCVSSCCRPQCCQSVCCQPTCSRPSCCQTTCCRTTCYRPSCCVSSCCRPQCCQPACCQPTCCRPSCCETTCCHPRCCISSCCRPSCCVSSCCKPQCCQSVCCQPNCCRPSCSISSCCRPSCCESSCCRPCCCVRPVCGRVSCHTTCYRPTCVISSCPRPLCCASSCC
Protein: Homeobox protein LUMINIDEPENDENS (Q38796)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Seems to play a role in the regulation of flowering time in the autonomous flowering pathway by repressing FLOWERING LOCUS C expression.
Subcellular location: Nucleus.
Interaction partners:
- Centromere/kinetochore protein zw10 homolog
- MAG2-interacting protein 2
- At3g24315
- Membrane fusion protein Use1
- At3g55600
- RINT1-like protein MAG2L
- RINT1-like protein MAG2
- Sec1/munc18-like
- SEC1 family transport protein SLY1
- Vesicle-fusing ATPase
Sequence:
MDAFKEEIEIGSSVESLMELLDSQKVLFHSQIDQLQDVVVAQCKLTGVNPLAQEMAAGALSIKIGKRPRDLLNPKAVKYLQAVFAIKDAISKRESREISALFGITVAQVREFFVTQKTRVRKQVRLSREKVVMSNTHALQDDGVPENNNATNHVEPVPLNSIHPEACSISWGEGETVALIPPEDIPPDISDSDKYFVENIFSLLRKEETFSGQVKLMEWIMQIQDASVLIWFLSKGGVLILTTWLSQAASEEQTSVLLLILKVLCHLPLHKASPENMSAILQSVNGLRFYRISDISNRAKGLLSRWTKLFAKIQAMKKQNRNSSQIDSQSQLLLKQSIAEIMGDSSNPEDILSLSNGKSENVRRIESSQGPKLLLTSADDSTKKHMLGSNPSYNKERRKVQMVEQPGQKAAGKSPQTVRIGTSGRSRPMSADDIQKAKMRALYMQSKNSKKDPLPSAIGDSKIVAPEKPLALHSAKDSPPIQNNEAKTEDTPVLSTVQPVNGFSTIQPVNGPSAVQPVNGPLAVQPVNGPSALQPVNGPSAVIVPVQADEIKKPSTPPKSISSKVGVMMKMSSQTILKNCKRKQIDWHVPPGMELDELWRVAAGGNSKEADVQRNRNRRERETTYQSLQTIPLNPKEPWDREMDYDDSLTPEIPSQQPPEESLTEPQDSLDERRIAAGAATTSSSLSSPEPDLELLAALLKNPDLVYALTSGKPSNLAGQDMVKLLDVIKTGAPNSSSSSNKQVEERVEVSLPSPTPSTNPGMSGWGQEGIRNPFSRQNQVGTAVARSGTQLRVGSMQWHQTNEQSIPRHAPSAYSNSITLAHTEREQQQYMQPKLHHNLHFQQQQQQPISTTSYAVREPVGQMGTGTSSSWRSQQSQNSYYSHQENEIASASQVTSYQGNSQYMSSNPGYESWSPDNSPSRNQLNMRGQQQQASRKHDSSTHPYWNQNKRWR
Protein: HTH-type transcriptional repressor RspR (P0ACM2)
Organism: Escherichia coli (strain K12)
Function: Repressor of the rspAB operon. Acts by binding directly to the upstream region of rspA.
Interaction partners:
- Starvation-sensing protein RspA
- HTH-type transcriptional regulator McbR
- Uxu operon transcriptional regulator
- NADP-dependent 3-hydroxy acid dehydrogenase YdfG
- Putative selenoprotein YdfZ
Sequence:
MTVETQLNPTQPVNQQIYRILRRDIVHCLIAPGTPLSEKEVSVRFNVSRQPVREAFIKLAENGLIQIRPQRGSYVNKISMAQVRNGSFIRQAIECAVARRAASMITESQCYQLEQNLHQQRIAIERKQLDDFFELDDNFHQLLTQIADCQLAWDTIENLKATVDRVRYMSFDHVSPPEMLLRQHLDIFSALQKRDGDAVERAMTQHLQEISESVRQIRQENSDWFSEE