wanglab/gogpt-training-data huggingface dataset:
Protein: SMR1 protein (VCS-alpha 1) [Cleaved into: SMR1-related undecapeptide; SMR1-related hexapeptide; Sialorphin (SMR1-related pentapeptide); Submandibular gland peptide T (SGP-T)] (P13432)
Organism: Rattus norvegicus (Rat)
Function: Sialorphin may be involved in the modulation of mineral balance between at least four systems: kidney, bone, tooth and circulation.
Subcellular location: Secreted {ECO:0000269|PubMed:8112327}. Note=Found in blood. Secreted from the salivary compartment into the blood circulation, rather than through absorption by the gastro-intestinal tract.
Interaction partners:
- Alanine aminotransferase 1
Sequence:
MKSLYLIFGLWILLACFQSGEGVRGPRRQHNPRRQQDPSTLPHYLGLQPDPNGGQIGVTITIPLNLQPPRVLVNLPGFITGPPLVVQGTTEYQYQWQLTAPDPTPLSNPPTQLHSTEQANTKTDAKISNTTATTQNSTDIFEGGGK
Protein: Meiotically up-regulated gene 108 protein (O14015)
Organism: Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Function: Has a role in meiosis.
Subcellular location: Cytoplasm {ECO:0000269|PubMed:16823372}. Nucleus {ECO:0000269|PubMed:16823372}.
Interaction partners:
Sequence:
MANRFTSSDQTQETHGHHVDKHSFSGRQRHPSMGVHSFNEYMNEYPEAGPLVQEEEDDMESSSYHATQEDIGDDDSRSESTRNRSSQHTGRVNFSSLGGLGSIFGGKKSRSKSANGTQKKNANNNEEQLDEEEQNDPYLDRDISLLGSTI
Protein: Cysteine/serine-rich nuclear protein 2 (CSRNP-2) (Protein FAM130A1) (TGF-beta-induced apoptosis protein 12) (TAIP-12) (Q9H175)
Organism: Homo sapiens (Human)
Function: Binds to the consensus sequence 5'-AGAGTG-3' and has transcriptional activator activity (By similarity). May play a role in apoptosis.
Subcellular location: Nucleus {ECO:0000250}.
Interaction partners:
- Serine/threonine-protein phosphatase PP1-alpha catalytic subunit
- Serine/threonine-protein phosphatase PP1-gamma catalytic subunit
Sequence:
MDAFTGSGLKRKFDDVDVGSSVSNSDDEISSSDSADSCDSLNPPTTASFTPTSILKRQKQLRRKNVRFDQVTVYYFARRQGFTSVPSQGGSSLGMAQRHNSVRSYTLCEFAQEQEVNHREILREHLKEEKLHAKKMKLTKNGTVESVEADGLTLDDVSDEDIDVENVEVDDYFFLQPLPTKRRRALLRASGVHRIDAEEKQELRAIRLSREECGCDCRLYCDPEACACSQAGIKCQVDRMSFPCGCSRDGCGNMAGRIEFNPIRVRTHYLHTIMKLELESKRQVSRPAAPDEEPSPTASCSLTGAQGSETQDFQEFIAENETAVMHLQSAEELERLKAEEDSSGSSASLDSSIESLGVCILEEPLAVPEELCPGLTAPILIQAQLPPGSSVLCFTENSDHPTASTVNSPSYLNSGPLVYYQVEQRPVLGVKGEPGTEEGSASFPKEKDLNVFSLPVTSLVACSSTDPAALCKSEVGKTPTLEALLPEDCNPEEPENEDFHPSWSPSSLPFRTDNEEGCGMVKTSQQNEDRPPEDSSLELPLAV
Protein: Complement C1q tumor necrosis factor-related protein 7 (Q8BVD7)
Organism: Mus musculus (Mouse)
Subcellular location: Secreted {ECO:0000305}.
Interaction partners:
Sequence:
MIVLLYVTSLAICASGQPRANQAKGESYSPRYICSIPGLPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLKGKTGPLGLAGEKGDQGETGKKGPIGPEGEKGEVGPAGPPGPKGDRGDQGDPGLPGVCRCGSIVLKSAFSVGITTSYPEERLPIIFNKVLFNEGEHYNPATGKFICAFPGIYYFSYDITLANKHLAIGLVHNGQYRIRTFDANTGNHDVASGSTVIYLQPEDEVWLEIFFNDQNGLFSDPGWADSLFSGFLLYVDTDYLDSISEDDEL
Protein: MFS domain-containing protein (Q18712)
Organism: Caenorhabditis elegans
Interaction partners:
- Cation-transporting ATPase
- Transient receptor potential channel
- Mitochondrial Rho GTPase 1
- GTL-1
- Cation-transporting ATPase catp-5
Sequence:
MTARRRPSMRTRMKAEDVSCWVEHNQQPFSPSDEPRVRFEAPAPVSARSDDSDAESVESLTERPVYKDGGYGWLVVLASFLMHAVCDGASFCFGIVFVKIQEHFQCGRFVSMITASMFLSLPLIMSPVAGIVSDILGCRMSIIIGASICTVSCIIAMFCSHIFFFMISFGLGCGVGMSFIYNAAIVIVTYYFEKRRGLATSFAVSGTGVGTVIYPILLNLSMIYLASFVSDIRIILIFFAVMYFVIAVIGFFIKDVEWESDKTDFKLRKFQKYIAKMDDEKENNTNPTDAFMRHAISLPNLNILNNHSGSIQSICDAAKAERKSDKPTRSKSVALFDNKHQMSSIPEYSMLNTNLANLEHLDLELANSPCTTVRAQRRRVISKVSMSVDQINELEDEAFHINLFQSSTESESDDESSSDDSEMSNDGDSSSSELSEKNLDEPTTKLINKNLENVAFRATSSVPNSARMNRNSVAAGTSNMFGGRVIASNAIQSRHATNLIAMGKIPSAPMLVARKNRKSMIGKPIQGFYKKWLETEKPIYQEVIHCRAYIYLALSVLCLYFILDVPYVCFYEYSIDTLKMEESEANYIYYSIGISNFISVLLFGTLADWTRKHITTIYASSMVGVGITIMFSTRINSLVELVIVGVCFGVTITSNYVLQSILVTICFEDVNLFQVAYSLIAMIEGVASLIGPPIFALVREATGGYTVVFFISGIFALASGFFGFMFSYEMNKRNTGDKDSIESGKPTELTNGNNRQTSTGSGAEQETLLDV
Protein: Apoptosis inhibitor 5 (API-5) (Antiapoptosis clone 11 protein) (AAC-11) (Cell migration-inducing gene 8 protein) (Fibroblast growth factor 2-interacting factor) (FIF) (Protein XAGL) (Q9BZZ5)
Organism: Homo sapiens (Human)
Function: Antiapoptotic factor that may have a role in protein assembly. Negatively regulates ACIN1. By binding to ACIN1, it suppresses ACIN1 cleavage from CASP3 and ACIN1-mediated DNA fragmentation. Also known to efficiently suppress E2F1-induced apoptosis. Its depletion enhances the cytotoxic action of the chemotherapeutic drugs.
Subcellular location: Nucleus {ECO:0000269|PubMed:11075807}. Cytoplasm {ECO:0000269|PubMed:11075807}. Note=Mainly nuclear. Can also be cytoplasmic.; SUBCELLULAR LOCATION: [Isoform 3]: Cytoplasm.
Interaction partners:
- DNA-directed RNA polymerase II subunit RPB2
- Fibroblast growth factor 2
- Apoptotic chromatin condensation inducer in the nucleus
- Zinc finger protein OZF
- TBC1 domain family member 23
- ATP-dependent RNA helicase DHX15
Sequence:
MPTVEELYRNYGILADATEQVGQHKDAYQVILDGVKGGTKEKRLAAQFIPKFFKHFPELADSAINAQLDLCEDEDVSIRRQAIKELPQFATGENLPRVADILTQLLQTDDSAEFNLVNNALLSIFKMDAKGTLGGLFSQILQGEDIVRERAIKFLSTKLKTLPDEVLTKEVEELILTESKKVLEDVTGEEFVLFMKILSGLKSLQTVSGRQQLVELVAEQADLEQTFNPSDPDCVDRLLQCTRQAVPLFSKNVHSTRFVTYFCEQVLPNLGTLTTPVEGLDIQLEVLKLLAEMSSFCGDMEKLETNLRKLFDKLLEYMPLPPEEAENGENAGNEEPKLQFSYVECLLYSFHQLGRKLPDFLTAKLNAEKLKDFKIRLQYFARGLQVYIRQLRLALQGKTGEALKTEENKIKVVALKITNNINVLIKDLFHIPPSYKSTVTLSWKPVQKVEIGQKRASEDTTSGSPPKKSSAGPKRDARQIYNPPSGKYSSNLGNFNYEQRGAFRGSRGGRGWGTRGNRSRGRLY
Protein: Sodium-dependent phosphate transporter 2 (Phosphate transporter 2) (PiT-2) (Receptor for amphotropic viruses 1) (RAM-1) (Solute carrier family 20 member 2) (Q63488)
Organism: Rattus norvegicus (Rat)
Function: Sodium-phosphate symporter which seems to play a fundamental housekeeping role in phosphate transport by absorbing phosphate from interstitial fluid for normal cellular functions such as cellular metabolism, signal transduction, and nucleic acid and lipid synthesis. In vitro, sodium-dependent phosphate uptake is not significantly affected by acidic and alkaline conditions, however sodium-independent phosphate uptake occurs at acidic conditions. May play a role in extracellular matrix and cartilage calcification as well as in vascular calcification. Functions as a retroviral receptor (By similarity).
Subcellular location: Cell membrane {ECO:0000269|PubMed:20526720}; Multi-pass membrane protein {ECO:0000255}. Apical cell membrane {ECO:0000269|PubMed:19073637}; Multi-pass membrane protein {ECO:0000255}. Note=Localized at the brush border membranes of the proximal tubules (PubMed:19073637, PubMed:20526720). Parathyroid hormone decreases its abundance in brush border membrane (PubMed:20526720). {ECO:0000269|PubMed:19073637, ECO:0000269|PubMed:20526720}.
Interaction partners:
- Solute carrier family 53 member 1
- Sodium-dependent phosphate transport protein 2C
- Sodium-dependent phosphate transport protein 2A
- Myogenesis-regulating glycosidase
- Fibroblast growth factor 23
Sequence:
MAMDGYLWMVILGFIIAFILAFSVGANDVANSFGTAVGSGVVTLRQACILASIFETTGSVLLGAKVGETIRKGIIDVNLYNETVETLMAGEVSAMVGSAVWQLIASFLRLPISGTHCIVGSTIGFSLVAIGPKGVQWMELVKIVASWFISPLLSGFMSGVLFILIRMFILTKEDPVPNGLQALPLFYAATIAINVFSIMYTGAPVLGLSLPIWAIALISFGVALLFAFFVWLFVCPWMKRKIAGRLEKESALSRASDESLRKVQEAESPVFKELPGAKASDDSAVPLTSLAGEAAGASEGTSAGNHPRASYGRALSMTHGSAKSPISNGTFGFEGHMRNDGHVYHTVHKDSGLYKDLLHKIHVDKGPEEKPAQENNYRLLRRNNSYTCYTAAICGMPVHATFRASDTSSAPEDSEKLVGDTVSYSKKRLRYDSYSSYCNAVAEAEIEAEEGGVEMRLASELTDPDQPHEDPAEDEKEEKDSAEVHLLFHFLQVLTACFGSFAHGGNDVSNAIGPLVALWLIYKQGGVTQEAATPVWLLFYGGVGICTGLWVWGRRVIQTMGKDLTPITPSSGFTIELASAFTVVIASNIGLPVSTTHCKVGSVVAVGWIRSRKAVDWRLFRNIFIAWFVTVPVAGLFSAAIMALLMYICGFVSSSR
Protein: Variant surface glycoprotein (VSG, atypical), putative (Q583L4)
Organism: Trypanosoma brucei brucei (strain 927/4 GUTat10.1)
Subcellular location: Cell membrane {ECO:0000256|ARBA:ARBA00004609}; Lipid-anchor, GPI-anchor {ECO:0000256|ARBA:ARBA00004609}.
Interaction partners:
Sequence:
MFTNHYAALLFILFVAEYSQCDEHALKEATAEKICQYSLHGKTQARSLAAKLQALEGSLQRYTKAGAQVTLLQLHSSSYAEGAAVLGSFIAQKKQETQAKLKALRKDAPLAAAALGYGAGITEEFISLLKQPVAANRGDNTCTNPKNGNNLEQSSLNGCAPYAFSDSTSTSNYLTDYGSAPFPTGGGHFQTTKNCKLFQANLQTYLGADPSNTDKMSFGGGIIVLAKSTPLTDSNVKTSKTAVSHVNSVLQALEKLKPHLQSDLSPSLDSPEAVQAFLDGKAKEDLKDLLKQAEGKTADLTPTEIDNAIDKYFGKKDSDGKRGIIKQLEKEDFKIKTESSTKPTALLDMALDDTIRLTAEKIVELRKQAVTSEKQTCDTPVNADGCNEIKIEEDCNATAACSFNKTETDNNKKCKFNETKATANGVPVTQTQSGGTTTPSDRCTKHTKKEECEAENKNAKAGEKAVCSWIEDKCRDSSFLPNKKFAYEYSCRFMNTVIL
Protein: Phosphatidylinositol-3,5-bisphosphate 3-phosphatase mtm-1 (EC 3.1.3.95) (Myotubularin-related protein 1) (Phosphatidylinositol-3-phosphate phosphatase) (Q9N589)
Organism: Caenorhabditis elegans
Function: Dephosphorylates phosphatidylinositol 3-phosphate (PI3P) and phosphatidylinositol 3,5-bisphosphate (PI(3,5)P2). Negatively regulates accumulation of PI3P on intracellular vesicles. Negatively regulates phagocytosis of apoptotic cells probably by limiting the recruitment and/or the activation of ced-5, ced-2 and ced-12 complex. In addition, may positively regulate phagosome maturation by promoting recycling of apoptotic receptor ced-1 back to the plasma membrane. Essential for embryonic and larval development. May promote migration of distal tip cells.
Subcellular location: Cell membrane {ECO:0000269|PubMed:19816564}; Peripheral membrane protein {ECO:0000269|PubMed:19816564}. Cell projection, phagocytic cup {ECO:0000269|PubMed:19816564}. Apical cell membrane {ECO:0000269|PubMed:21490059}; Peripheral membrane protein {ECO:0000269|PubMed:21490059}. Cytoplasmic granule membrane {ECO:0000269|PubMed:21490059}. Note=Transiently co-localizes with phagocytic receptor ced-1 at the pseudopods during phagocytosis of apoptotic cells. {ECO:0000269|PubMed:19816564}.
Interaction partners:
- Phosphatidylinositol 3-kinase piki-1
- Phosphatidylinositol 3-kinase catalytic subunit type 3
- Myotubularin-related protein 5
- SAC domain-containing protein
- Phosphatidylinositol-3,5-bisphosphate 3-phosphatase MTMR3
- CDP-diacylglycerol--inositol 3-phosphatidyltransferase
- Phosphatidylinositol-3,5-bisphosphate 3-phosphatase MTMR6
- Phosphatidylinositol-3-phosphatase SAC1
- Myotubularin phosphatase domain-containing protein
- 1-phosphatidylinositol-5-phosphate 4-kinase
Sequence:
MDDRGNNSGEVGEFASSSMIQESIDLKLLAAESLIWTEKNVTYFGPLGKFPGKIVITRYRMVFLVGDGGKMYEQWKLDIPLGQVSRIEKVGRKTTSVAKRGDDNYGFTIYCKDYRVYRFTCNPASSDRKNVCDSLNRYAFPLSHNLPMFASVHAAETPRLMKDGWKIYSAEKEYERLGIPNSRLWKEVDINKDYKFSETYPRTFVIPTVSWEEGKPFVKKLGEFRSKERIPVLSWINQTTLASISRCSQPMTGISGKRSAEDERHLTNIMNANANCRELLILDARPAVNAKLNKAKGGGYEENYVNAPLTFLNIHNIHVVRDSLKRLLAALIPRVDEKGYYKALDESKWLNHVQSILEGAVKAVFNVDTEKQSVLIHCSDGWDRTAQLTSLAMIQLDSYYRTIEGFIVLIEKEWCSFGHKFGERIGHGDDNYSDGERSPVFVQFCDCLWQIMRQFPWAFEFTQELLICMLDELYACRYGTFLYNSEKIRLKDKKCDETTISFWSYVLENKKKFRNPMFKHGKSNKVINVNPSLCGLHVWIDYYARSNPYVVTPNHEDVQQPGAQFVDEKKQLLDEIMALDDAAQKLTA
Protein: Uncharacterized membrane protein C18H10.18c (O60148)
Organism: Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Subcellular location: Cytoplasm {ECO:0000269|PubMed:16823372}. Membrane {ECO:0000305}; Multi-pass membrane protein {ECO:0000305}.
Interaction partners:
- Uncharacterized membrane protein C30D10.09c
- Uncharacterized protein C594.02c
- Probable lipase C14C8.15
- TBC domain-containing protein C23D3.03c
- Putative mannan endo-1,6-alpha-mannosidase C1198.07c
- GTPase-activating protein gyp3
- Putative lysophosphatidic acid:oleoyl-CoA acyltransferase
Sequence:
MPDEKLPQYNEVWNDLEKGCLHSCPSYSVNNHVNNPIVKQNSTLTQPSLRKKNTMAAPARLRKRSENVRLTQARYAIFHIFLPFILTLLLYHNFYNYFDQALADLNSVVKYVIETIVLIFTYVMTVIIVYFSFSLIKLAFEEAYVYAPSVAKANEGLAKHVAKTIAGLVKYVAKAIQGLAHIILSLLLFILGLEVIEQDEETGDVEMSSMRGQAITTEPASDNTMAEGTDCNTSKDVESGSS
Protein: EIN3-binding F-box protein 1 (F-box/LRR-repeat protein 6) (Q9SKK0)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Component of SCF(EBF1) E3 ubiquitin ligase complexes, which may mediate the ubiquitination and subsequent proteasomal degradation of target proteins (probably including EIN3 and EIL1). Regulator of the ethylene signaling cascade by modulating the stability of EIN3 and EIL1 proteins. Confers insensitivity to ethylene.
Subcellular location: Nucleus {ECO:0000269|PubMed:14675533}.
Interaction partners:
- Protein ETHYLENE INSENSITIVE 3
- ETHYLENE INSENSITIVE 3-like 1 protein
- ETHYLENE INSENSITIVE 3-like 2 protein
- ETHYLENE INSENSITIVE 3-like 3 protein
- Ethylene-insensitive protein 2
- EIN3-binding F-box protein 2
- Putative ETHYLENE INSENSITIVE 3-like 4 protein
- Serine/threonine-protein kinase CTR1
- Cullin-1
- Phytochrome B
Sequence:
MSQIFSFAGENDFYRRGAIYPNPKDASLLLSLGSFADVYFPPSKRSRVVAPTIFSAFEKKPVSIDVLPDECLFEIFRRLSGPQERSACAFVSKQWLTLVSSIRQKEIDVPSKITEDGDDCEGCLSRSLDGKKATDVRLAAIAVGTAGRGGLGKLSIRGSNSAKVSDLGLRSIGRSCPSLGSLSLWNVSTITDNGLLEIAEGCAQLEKLELNRCSTITDKGLVAIAKSCPNLTELTLEACSRIGDEGLLAIARSCSKLKSVSIKNCPLVRDQGIASLLSNTTCSLAKLKLQMLNVTDVSLAVVGHYGLSITDLVLAGLSHVSEKGFWVMGNGVGLQKLNSLTITACQGVTDMGLESVGKGCPNMKKAIISKSPLLSDNGLVSFAKASLSLESLQLEECHRVTQFGFFGSLLNCGEKLKAFSLVNCLSIRDLTTGLPASSHCSALRSLSIRNCPGFGDANLAAIGKLCPQLEDIDLCGLKGITESGFLHLIQSSLVKINFSGCSNLTDRVISAITARNGWTLEVLNIDGCSNITDASLVSIAANCQILSDLDISKCAISDSGIQALASSDKLKLQILSVAGCSMVTDKSLPAIVGLGSTLLGLNLQQCRSISNSTVDFLVERLYKCDILS
Protein: Ly49 inhibitory receptor 1 (Q62982)
Organism: Rattus norvegicus (Rat)
Subcellular location: Membrane {ECO:0000256|ARBA:ARBA00004606}; Single-pass type II membrane protein {ECO:0000256|ARBA:ARBA00004606}.
Interaction partners:
Sequence:
MSEQEVTYSSVRFSKSSGLQNQVKPEETKGPKEAGHRECYVPWHLIVIALGILCTLLLLTVAVLVTIIFQYSQEKHELQETLNHHHNCSAMQRDIDLKEEMLRKISIDCSPGNDLLESFNRSKNRWYSKTKAVVNSSQHKGSEIETYWFCYGIKCYYVIKDGKSWDECKQTCQNSSLFLLKIDDEDERKFLQQQLIPDNYWIGFSYDKEKKEWAWIENGPSKLASNTMKFNKKLGGCVFLSKTRLDHTDCINLYSCICGKKLNKFPDLPLQLVLK
Protein: PpGpp-regulated growth inhibitor (Q8DW95)
Organism: Streptococcus mutans serotype c (strain ATCC 700610 / UA159)
Interaction partners:
- SpoVT-AbrB domain-containing protein
Sequence:
MVTIKQGSIIKINLDPKQGHEQKGYRPYICLNHSIVTKYSNIGIFAPISNTKRDYPFYVSLEGTESTGKVLLDQLVTIDFNARDYRYVEDIQEDLLDELLARVKVLFEKG
Protein: Neuronal PAS domain protein 3 isoform A (X5D2Q4)
Organism: Homo sapiens (Human)
Subcellular location: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
Interaction partners:
Sequence:
MAPTKPSFQQDPSRRERITAQHPLPNQSECRKIYRYDGIYCESTYQNLQALRKEKSRDAARSRRGKENFEFYELAKLLPLPAAITSQLDKASIIRLTISYLKMRDFANQGDPPWNLRMEGPPPNTSVKVIGAQRRRSPSALAIEVFEAHLGSHILQSLDGFVFALNQEGKFLYISETVSIYLGLSQVELTGSSVFDYVHPGDHVEMAEQLGMKLPPGRGLLSQGTAEDGASSASSSSQSETPEPVESTSPSLLTTDNTLERSFFIRMKSTLTKRGVHIKSSGYKVIHITGRLRLRVSLSHGRTVPSQIMGLVVVAHALPPPTINEVRIDCHMFVTRVNMDLNIIYCENRISDYMDLTPVDIVGKRCYHFIHAEDVEGIRHSHLDLLNKGQCVTKYYRWMQKNGGYIWIQSSATIAINAKNANEKNIIWVNYLLSNPEYKDTPMDIAQLPHLPEKTSESSETSDSESDSKDTSGITEDNENSKSDEKGNQSENSEDPEPDRKKSGNACDNDMNCNDDGHSSSNPDSRDSDDSFEHSDFENPKAGEDGFGALGAMQIKVERYVESESDLRLQNCESLTSDSAKDSDSAGEAGAQASSKHQKRKKRRKRQKGGSASRRRLSSASSPGGLDAGLVEPPRLLSSPNSASVLKIKTEISEPINFDNDSSIWNYPPNREISRNESPYSMTKPPSSEHFPSPQGGGGGGGGGGGLHVAIPDSVLTPPGADGAAARKTQFGASATAALAPVASDPLSPPLSASPRDKHPGNGGGGGGGGGGAGGGGPSASNSLLYTGDLEALQRLQAGNVVLPLVHRVTGTLAATSTAAQRVYTTGTIRYAPAEVTLAMQSNLLPNAHAVNFVDVNSPGFGLDPKTPMEMLYHHVHRLNMSGPFGGAVSAASLTQMPAGNVFTTAEGLFSTLPFPVYSNGIHAAQTLERKED
Protein: Eco29kIR (Q46944)
Organism: Escherichia coli
Interaction partners:
Sequence:
MHNKKFDRSEHVYRNDSFLELIKDAVRFFSGTPVHSLPPPERFQGAGVYALYYTGHYSLYDEYSRINRLAYNLPIYVGKAVPAGWRQSRISDHETRAGSELSNRIREHGRNIAKTSNLDLCDFSCRFVIFEATGSDMISTVEAALIKIYKPLWNTVVDGFGNHTPGAGRFAQAKSDWDVIHPGREWAEKCTGVHSEPYFIEERIKQYFSKSNFT
Protein: DNA repair protein MmcB-related protein (Q9A2T9)
Organism: Caulobacter vibrioides (strain ATCC 19089 / CIP 103742 / CB 15) (Caulobacter crescentus)
Interaction partners:
- DUF983 domain-containing protein
- DUF983 domain-containing protein
- DUF983 domain-containing protein
Sequence:
MDVIIELAPSRPETTLAVTRGAARLLVDLGYAPLAEVTLPNGRRADLMALGPKGDVLIVEVKSGLEDFRVDRKWGDYAPFCDAFYFAVAPSFPDGILPEDPGLLVADGFGGAVVREAPLTPLAPARRKALTLAFGRLAAWRAAGVNAERLSL
Protein: Msi1 protein (Musashi homolog 1 (Drosophila)) (RNA-binding protein Musashi homolog 1 Short) (RNA-binding protein Musashi homolog 1b) (Q5BKV4)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Subcellular location: Cytoplasm {ECO:0000256|ARBA:ARBA00004496}.
Interaction partners:
Sequence:
MESEGSQSNLSSSDSPHDPCKMFIGGLSWQTTQEGLKDYFCKFGEVKESMVMRDPVTKRSRGFGFVTFVDQAGVDKVLAQTRHELDSKTIDPKVAFPRRAQPKLVTRTKKIFVGGLSVNTTIEDVKQYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMSPTGSSRGRARVMPYGMDAFMLGIGMLGYPGFQATTYAGRSYTSLTPGYTYQFPAIPLTAYNPMAAAAAAAAVVRGSTPSRSAGFLGTSSPGPMADLYGTANQESAVSSYLSAASPAPSTGFSHSLGGPLIATAFTNGYH
Protein: Perlwapin (P86730)
Organism: Haliotis asinina (Donkey's ear abalone) (Ass's ear abalone)
Function: Inhibits growth of calcium carbonate crystals. May inhibit growth of certain crystallographic planes in the mineral phase of nacre in the shell (By similarity).
Subcellular location: Secreted {ECO:0000269|PubMed:21050442}.
Interaction partners:
Sequence:
LILCVVVCTAAVLGTAAGYESQLPGCPPGAYPAICARYCYSDRDCASGYYCCNTGCLNICVPKPKPGLCPSITQSPCRGNVCNNDQDCPGNRKCCGKPGCKRCYRPKKPGSCPARKYEAGPCVVYCDGDFDCPGDKKCCGGCPRLCEKPCYD
Protein: E3 ubiquitin-protein ligase (EC 2.3.2.26) (A0A0G2K612)
Organism: Rattus norvegicus (Rat)
Interaction partners:
- Mothers against decapentaplegic homolog
- Mothers against decapentaplegic homolog 7
- Mothers against decapentaplegic homolog 1
- E3 ubiquitin-protein ligase
- TGF-beta receptor type-1
- Mothers against decapentaplegic homolog 5
- TGF-beta receptor type-2
- NEDD4-like E3 ubiquitin protein ligase.
- TNF receptor-associated factor 6
- E3 ubiquitin-protein ligase CBL
Sequence:
MSNPGTRRNGSSIKIRLTVLCAKNLAKKDFFRLPDPFAKIVVDGSGQCHSTDTVKNTLDPKWNQHYDLYVGKTDSITISVWNHKKIHKKQGAGFLGCVRLLSNAISRLKDTGYQRLDLCKLNPSDTDAVRGQIVVSLQTRDRIGGGGSVVDCRGLLENEGTVYEDSGPGRPLSCLMEEPAPYTDGTGAAAGGGNCRFVESPSQDQRLLVQRLRNPEVRGSLQTPQNRPHGHQSPELPEGYEQRTTVQGQVYFLHTQTGVSTWHDPRIPSPLGTIPGGDEAFLYEFLLQGHTSEPRDLNSVNCDELGPLPPGWEVRSTVSGRIYFVDHNNRTTQFTDPRLHHIMNHQCQLKEPSQPLQLPSEGSVEDEELPAQRYERDLVQKLKVLRHELSLQQPQAGHCRIEVSREEIFEESYRQIMKMRPKDLKKRLMVKFRGEEGLDYGGVAREWLYLLCHEMLNPYYGLFQYSTDNIYTLQINPDSSINPDHLSYFHFVGRIMGLAVFHGHYINGGFTVPFYKQLLGKPIQLSDLESVDPELHKSLVWILENDITPVLDHTFCVEHNAFGRILQHELKPNGRNVPVTEENKKEYVRLYVNWRFMRGIEAQFLALQKGFNELIPQHLLKPFDQKELELIIGGLDKIDLNDWKSNTRLKHCVADSNIVRWFWQAVETFDEERRARLLQFVTGSTRVPLQGFKALQGSTGAAGPRLFTIHLIDANTDNLPKAHTCFNRIDIPPYESYEKLYEKLLTAVEETCGFAVE
Protein: Peptidyl-prolyl cis-trans isomerase CPR6 (PPIase CPR6) (EC 5.2.1.8) (Rotamase CPR6) (P53691)
Organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Function: PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.
Subcellular location: Cytoplasm {ECO:0000250}.
Interaction partners:
- Hsp90 co-chaperone AHA1
- ATP-dependent molecular chaperone HSP82
- ATP-dependent molecular chaperone HSC82
- Co-chaperone protein SBA1
- Heat shock protein STI1
- Hsp90 co-chaperone HCH1
- FK506-binding protein 1
- Hsp90 co-chaperone Cdc37
- Protein SIS1
- Peptidyl-prolyl cis-trans isomerase FPR2
Sequence:
MTRPKTFFDISIGGKPQGRIVFELYNDIVPKTAENFLKLCEGNAGMAKTKPDVPLSYKGSIFHRVIKDFMCQFGDFTNFNGTGGESIYDEKFEDENFTVKHDKPFLLSMANAGPNTNGSQAFITCVPTPHLDGKHVVFGEVIQGKRIVRLIENQQCDQENNKPLRDVKIDDCGVLPDDYQVPENAEATPTDEYGDNYEDVLKQDEKVDLKNFDTVLKAIETVKNIGTEQFKKQNYSVALEKYVKCDKFLKEYFPEDLEKEQIEKINQLKVSIPLNIAICALKLKDYKQVLVASSEVLYAEAADEKAKAKALYRRGLAYYHVNDTDMALNDLEMATTFQPNDAAILKAIHNTKLKRKQQNEKAKKSLSKMFS
Protein: RNA polymerase II-associated factor 1 homolog (PD2-like protein) (Q4U0S5)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Function: Component of the PAF1 complex (PAF1C) which has multiple functions during transcription by RNA polymerase II. PAF1C associates with RNA polymerase II, is involved in transcriptional elongation and in histone modifications including methylation on histone H3 'Lys-4' (H3K4me3) (By similarity). PAF1C seems to be required for multiple steps in cardiac formation. Involved in the migration of myocardial precursors to the midline and the differentiation of the atrioventricular boundary in the developing heart.
Subcellular location: Nucleus {ECO:0000269|PubMed:21338598}.
Interaction partners:
- Parafibromin
- RNA polymerase-associated protein CTR9 homolog
- RNA polymerase-associated protein LEO1
- RTF1 homolog, Paf1/RNA polymerase II complex component.
- DNA-directed RNA polymerase subunit
- Superkiller complex protein 8
- Transcription elongation factor SPT5
- Transcription elongation factor SPT4
- FACT complex subunit
- Transcription elongation factor SPT6
Sequence:
MAPTIQTQAQREDGHRSSAHRTVPERSGVVCRVKYGNSLPDIPFDPKFITYPFDQHRFVQYKATSLEKQHKHELLTEPDLGVTIDLINPDTYRIDPNILLDPADEKLLEEEIQAPSSSKRSQQHAKVVPWMRKTEYISTEFNRYGVSNEKVEVKIGVSVKQQFTEEEIYKDRDSQIAAIEKTFEDAQKSISQHYSKPRVTPVEVLPVFPDFKMWINPCAQVIFDSDPAPKDVSAPAGVDMMSQAMIRGMMDEEGNQFVAYFLPNEDTMRKRKRDVEEELDYMPEEVYEYKIAREYNWNVKNKASKGYEENYFFIFRDADGVYYNELETRVRLSKRRAKVGAQSSTNAVLVCKHRDMNEKELEAQEARKAQLENHEPEDEEEELDLEKDMQEDSGEEREKPSDSENSESESEREEEERPADEDEEEEEDEESVKRRRERKSSGSESGDDRQARDEEEIFGSDDDSEEEEEEEEEGGARRRSNSSSVQHSASERASDSSDASDSD
Protein: Dirigent protein 10 (AtDIR10) (Protein ENHANCED SUBERIN 1) (Q9SIA8)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Dirigent proteins impart stereoselectivity on the phenoxy radical-coupling reaction, yielding optically active lignans from two molecules of coniferyl alcohol in the biosynthesis of lignans, flavonolignans, and alkaloids and thus plays a central role in plant secondary metabolism (By similarity). Regulates suberin accumulation in roots.
Subcellular location: Secreted, extracellular space, apoplast {ECO:0000250}.
Interaction partners:
- Casparian strip membrane protein 1
- Transcription factor MYB36
- LRR receptor-like serine/threonine-protein kinase GSO1
- Peroxidase 64
- Uncharacterized protein
- Casparian strip membrane protein 3
- Dirigent protein 13
- Dirigent protein 6
- Glycerol-3-phosphate acyltransferase 5
- Dirigent protein 7
Sequence:
MAGQKILSLLVIALVVTFAAAARLLDEENAFSATTTTLGSGSGSTGIGFGAGTGSSGSGSTGFGFGAGSGSSGSGSTGSGLGAGTGSIPSSGSGPGLLPTASSVPGSLAGGGSGSLPTTGSATGAGAGTGSALGGGPGAGSALGGGAGAGPALGGGAGAGPALGGGAGAGSALGGGGAGAGPALGGGGAGAGPALGGGVAGSGSALGGGASAGPDNTLVFFMHDILGGSNPTARAVTGVVANPALSGQLPFAKPNGANLPVSNGVPSNNNNNGIVNNNNVPFLVGLGGTTANILQNNNNGNNILNGFPVASGGQLPSGSALQMLMFGTMTVIDDELTEGHELGSGLLGKAQGYYVASAIDGTSQTMAFTAMFESGGYEDSISFFGVLRTAVSESHIGVMGGTGKYVNARGFAILKTFTGSSGTQQNQPHQFTDGLETVVECTVYLSY
Protein: Rop guanine nucleotide exchange factor 14 (AtRopGEF14) (Rho of plants guanine nucleotide exchange factor 14) (Q56WM6)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Guanine-nucleotide exchange factor (GEF) that acts as an activator of Rop (Rho of plants) GTPases by promoting the exchange of GDP for GTP.
Subcellular location: Cell membrane {ECO:0000269|PubMed:16415208}. Note=Localizes to the apical region of the pollen tube plasma membrane.
Interaction partners:
- MOB kinase activator-like 1B
- Putative MOB kinase activator-like 2B
- MOB kinase activator-like 2A
- Protein NLP2
- Rac-like GTP-binding protein ARAC10
- Protein NLP1
- Protein NLP3
- Protein NLP9
- MOB kinase activator-like 1A
- Rac-like GTP-binding protein ARAC1
Sequence:
MMLMRRRLACCSREREISIDFDEHEQDKMITYYGLETCIINNQSYEEESGTSRGDGCLTDSLDDDAFSSCSSSKDASSSFSSKWLPMKNDEHSCDGLNLSGRSQHFDAKEKKKQGYGSSQHFDAKEKPGYVYCHLDVEAMKEKFSKLLLGEDVTGGCKGVQVALALSNAVTHLATSIFGELWKLEPLCEEKKQKWRREMDWLLSPTNYMIELVPSKQNDANGRSLEIMTPKARADIHMNLPALQKLDSMLIETLDSMVNTEFWYSEIGSRAEGKNKSTSESKRWWLPSPQVPKPGLSNSGRKKLLDKGKVVYQVFKATKAINENILLEMPVPIVIKEAIPKSGKNSLGDELYKMLAVESATVDEIFISLNLGTEHAALETVNKLESAMFAWKERITEQGSNGKSPVRASWSFAKDPLSEIGRNESLLNRAEALRTQIKSKHPNLPHSFLDATKIQYDKDIGHAVLEAYSRTLANLAFRILSRMGEILKEDSLSNPNSPAPPSCFPSSRDPYRTPERPLLSSRVRHSLTDDMNKADGTETGLDFLFADAKASNSVNTTPSRSSRLWCLSKVPSDTSP