wanglab/gogpt-training-data huggingface dataset:
Protein: Inhibitor of growth family member 3 (A0A0C4DG38)
Organism: Homo sapiens (Human)
Interaction partners:
Sequence:
MLYLEDYLEMIEQLPMDLRDRFTEMREMDLQVQNAMDQLEQRVSEFFMNAKKNKPEWREEQMASIKKDYYKALEDADEKVQLANQIYDLVSKSNVHTVP
Protein: E3 ubiquitin-protein ligase RNF138 (EC 2.3.2.27) (RING finger protein 138) (RING-type E3 ubiquitin transferase RNF138) (Q9CQE0)
Organism: Mus musculus (Mouse)
Function: E3 ubiquitin-protein ligase involved in DNA damage response by promoting DNA resection and homologous recombination. Recruited to sites of double-strand breaks following DNA damage and specifically promotes double-strand break repair via homologous recombination. Two different, non-exclusive, mechanisms have been proposed. According to a report, regulates the choice of double-strand break repair by favoring homologous recombination over non-homologous end joining (NHEJ): acts by mediating ubiquitination of XRCC5/Ku80, leading to remove the Ku complex from DNA breaks, thereby promoting homologous recombination. According to another report, cooperates with UBE2Ds E2 ubiquitin ligases (UBE2D1, UBE2D2, UBE2D3 or UBE2D4) to promote homologous recombination by mediating ubiquitination of RBBP8/CtIP. Together with NLK, involved in the ubiquitination and degradation of TCF/LEF. Also exhibits auto-ubiquitination activity in combination with UBE2K. May act as a negative regulator in the Wnt/beta-catenin-mediated signaling pathway.
Subcellular location: Chromosome {ECO:0000250|UniProtKB:Q8WVD3}. Note=Recruited at DNA damage sites. Localizes to sites of double-strand break: localization to double-strand break sites is mediated by the zinc fingers. {ECO:0000250|UniProtKB:Q8WVD3}.
Interaction partners:
Sequence:
MSEELSAATSYTEDDFYCPVCQEVLKTPVRTAACQHVFCRKCFLTAMRESGIHCPLCRGSVTRRERACPERALDLENIMRRFSGSCRCCSKKIKFYRMRHHYKSCKKYQDEYGVSSVIPNFKISQDSVRSSNRSETSASDNTETYQEDTSSSGHPTFKCPLCQESNFTRQRLLDHCNSNHLFQIVPVTCPICVSLPWGDPSQITRNFVSHLNQRHQFDYGEFVNLQLDEETQYQTAVEESFQVNM
Protein: Probable mRNA-splicing protein ubp10 (Probable inactive ubiquitin-specific-processing protease 10) (Q9USR2)
Organism: Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Function: May play a role in mRNA splicing. It is unsure if the protein really exhibits hydrolase activity. Could be a competitor of ubiquitin C-terminal hydrolases (UCHs) (By similarity).
Subcellular location: Nucleus {ECO:0000269|PubMed:16823372}.
Interaction partners:
- Pre-mRNA-splicing factor cwf10
- Pre-mRNA-splicing factor spp42
- U4/U6.U5 tri-snRNP-associated protein snu66
- U4/U6.U5 tri-snRNP-associated protein 3-like protein C162.01c
- Pre-mRNA-processing factor 31
- U4/U5/U6 small nuclear ribonucleoprotein prp3
- Uncharacterized WD repeat-containing protein C227.12
- Pre-mRNA-splicing factor prp1
- Small nuclear ribonucleoprotein E
- Small nuclear ribonucleoprotein Sm D2
Sequence:
MSENKDKNNILKRHIEEDNNIDNGKRKKLELGKDMEDVHDIASKEMEEHETTPIISQNLYLDTINRKLLDFDFEKVCSVSLTNLSVYACLVCGRYFQGRGPSSHAYFHALTENHHVFVNCSTLKFYVLPESYQVESSALQDIAYVMRPTFTKLEVQRLDHTPQLSYDLMLKPYVPGFVGMNNIKNNDYFNVVIHMLAHVKPFRNYFLLKNFDNCPQLVQRLAILIRKLWNHKAFKSHVSPQELIQEVTVLSHKKYSINEQKDPVEFLSWFLNTLHNCLGGKKSTIAKPTSIVHYSFQGFVRIESQKIRQHAEKGEQVVFTGDRVIQTNVVPFLYLTLDLPPKPIFQDEFEGNIIPQVELKEILNKYNGVHTQELAGMRRRFHLMTAPPYFIFHIKRFMKNNYFTERNQTIVTFPLDDFDMSPFIDDSFIQSNPKISTKYNLVANIIHESVTHAEEEFHNFRIQIRNPSTNKWYQIQDLYVEEISSDMIRLGESFIQLWERSS
Protein: Kunitz trypsin inhibitor 5 (AtKTI5) (Kunitz trypsin inhibitor 2) (AtKTI2) (Q9LMU2)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Can inhibit both serine proteases and cysteine proteases. May be involved in the modulation of the proteases that participate in the hydrolysis of dietary proteins in the gut of spider mites.
Subcellular location: Endoplasmic reticulum {ECO:0000269|PubMed:30042779}.
Interaction partners:
- Kunitz trypsin inhibitor 6
- Protease inhibitor
- Kunitz trypsin inhibitor 7
- Serine protease inhibitor, potato inhibitor I-type family protein
- NHL domain-containing protein
Sequence:
MSSLLYIFLLLAVFISHRGVTTEAAVEPVKDINGKSLLTGVNYYILPVIRGRGGGLTMSNLKTETCPTSVIQDQFEVSQGLPVKFSPYDKSRTIPVSTDVNIKFSPTSIWELANFDETTKQWFISTCGVEGNPGQKTVDNWFKIDKFEKDYKIRFCPTVCNFCKVICRDVGVFVQDGKRRLALSDVPLKVMFKRAY
Protein: Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP22 (EC 3.6.4.13) (P24384)
Organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Function: Acts late in the splicing of pre-mRNA. Mediates the release of the spliced mRNA from spliceosomes.
Subcellular location: Nucleus.
Interaction partners:
- Small nuclear ribonucleoprotein Sm D1
- Pre-mRNA-processing factor 17
- Pre-mRNA-splicing factor 8
- Small nuclear ribonucleoprotein-associated protein B
- Small nuclear ribonucleoprotein E
- Small nuclear ribonucleoprotein F
- U2 small nuclear ribonucleoprotein B''
- Pre-mRNA-splicing factor CWC21
- Pre-mRNA-splicing factor PRP46
- Pre-mRNA-splicing factor SLT11
Sequence:
MSDISKLIGAIVGSDDPVIIEFVLNIINKSGNLQEFIRNIQKLDAGISYEDSIKMYNAFLGKQEEEKVRNKVKSSPLSQKINQVLKDDVNLDDPVVTEFVLSILNKSKSITEFQEQLNLMQSGLDNETIFKIYQIASPPVMKEEVSVLPSTKIPAKIEAKIEEEVQKIESLDPSPVLHKVYEGKVRNITTFGCFVQIFGTRMKNCDGLVHISEMSDQRTLDPHDVVRQGQHIFVEVIKIQNNGKISLSMKNIDQHSGEIRKRNTESVEDRGRSNDAHTSRNMKNKIKRRALTSPERWEIRQLIASGAASIDDYPELKDEIPINTSYLTAKRDDGSIVNGNTEKVDSKLEEQQRDETDEIDVELNTDDGPKFLKDQQVKGAKKYEMPKITKVPRGFMNRSAINGSNAIRDHREEKLRKKREIEQQIRKQQSFDDPTKNKKDSRNEIQMLKNQLIVTEWEKNRMNESISYGKRTSLPISAQRQTLPVYAMRSELIQAVRDNQFLVIVGETGSGKTTQITQYLDEEGFSNYGMIGCTQPRRVAAVSVAKRVAEEVGCKVGHDVGYTIRFEDVTGPDTRIKYMTDGMLQREALLDPEMSKYSVIMLDEAHERTVATDVLFALLKKAAIKRPELKVIVTSATLNSAKFSEYFLNCPIINIPGKTFPVEVLYSQTPQMDYIEAALDCVIDIHINEGPGDILVFLTGQEEIDSCCEILYDRVKTLGDSIGELLILPVYSALPSEIQSKIFEPTPKGSRKVVFATNIAETSITIDGIYYVVDPGFAKINIYNARAGIEQLIVSPISQAQANQRKGRAGRTGPGKCYRLYTESAFYNEMLENTVPEIQRQNLSHTILMLKAMGINDLLKFDFMDPPPKNLMLNALTELYHLQSLDDEGKLTNLGKEMSLFPMDPTLSRSLLSSVDNQCSDEIVTIISMLSVQNVFYRPKDRQLEADSKKAKFHHPYGDHLTLLNVYTRWQQANYSEQYCKTNFLHFRHLKRARDVKSQISMIFKKIGLKLISCHSDPDLIRKTFVSGFFMNAAKRDSQVGYKTINGGTEVGIHPSSSLYGKEYEYVMYHSIVLTSREYMSQVTSIEPQWLLEVAPHFYKAGDAESQSRKKAKIIPLHNKFAKDQNSWRLSSIRQSRERALGIKR
Protein: Importin-13 (F1Q9F5)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Subcellular location: Cytoplasm {ECO:0000256|ARBA:ARBA00004496}. Nucleus {ECO:0000256|ARBA:ARBA00004123}.
Interaction partners:
- RNA-binding protein 8A
- SUMO-conjugating enzyme UBC9-B
- SUMO-conjugating enzyme UBC9-A
- Protein mago nashi homolog
- Importin 4.
- Phosphoribosylglycinamide formyltransferase.
- Exportin-4
- GTP-binding nuclear protein Ran
- Importin-11
- Exportin-T
Sequence:
MDSDTAADFTVENVEKALHQLYYDPNIENKNLAQKWLMQAQVSPQAWQFCWVLLRPDKVPEIQYFGASALHTKISRYWSDIPAEQYDSLKSQLFSQIARFASGSKIVLTRLCVALASLALNMMPEAWPGAVSEMVRMFQEDGGDVDGRARCLALLELLTVLPEEFQTSRLPQYRKGQVRGALGSEWTAVYPLLQQLLRQPDSPSLVKARVLKCLSSWVLLDVPLNESEGLVEASFTALADPELFDTAVEAIVNTISQPDSQRYVNTLLKLVPQVLQLQEQLRDAVQNGDMETSHGICRIAVSLGENHSRALLEQVEHWQSFLALVNMIMFCTGIPGHYPVNETTSSLTLTFWYTLQDDIMSFEAEKQAVYLQVYRPVYFQLVDVLLHKAQFPTDEEYASWSSDEKEQFRIYRVDISDTLMYVYEMLGAELLSNLYDKLGRLLTNTEQTTTWQHTEALLYGFQSIAETIDVNYSDVIPGLIGLIPRININNVQLADTVMFTIGALAEWLADHPVMLSSVLPLVLQALGNPDLSVSSVSTLKKICRECKYDLPPYATNIVAVSQEVLIKQIHKTSQCMWLMQALGFLLSALPVEEILRNLHSLITPYIQQLEKLAEETPNPSNKLAIIHILGLLSNLFTTLDITKQEDESGENAPPIKSAPPPTGPNPVVVVLQQVFALIQTVLSKWLNDSQVVEAVCAIFEKSVKTLLHDFAPMVSQLSEMLGQMYSTIPQASALDLTRQMVHIFASETNHFPPIKALFELVTSVTLTIFQQGPRDHPDIVDSFMQLQAQALKRKPDLFLSENLDVKAVFHCGVLSLKFPEAPTVKSTCLFFSELIPHCADIPPLARVVQEDGKLLLVAVLEAIGGQSSRSLMDQFAEVLFCLNKHCFTLLTVWLKEALRSPGFPSSRVSDEQKNTFSQQVLRERVNKRRVKDIVKEFTLVCRGLHGTEYAADY
Protein: UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) (E1JI91)
Organism: Drosophila melanogaster (Fruit fly)
Interaction partners:
Sequence:
MPSGIRPIDVLLERAGVRGHQRAPSDSKEFHEVTKRDALRLLEHDVDRLLETTEKARQPALKAEMGRFADLFGRFIQEEGPALDWNKIQKLPENAVMNYSNLKSPKNEQIRNMLDKLVVIKLNGGLGTSMGCHGPKSVIPVRSDLTFLDLTVQQIEHLNKTYDANVPLVLMNSFNTDEDTEKIVRKYKGFRVQIHTFNQSCFPRISREHYLPVAKDFDVEKDMEAWYPPGHGDFYDTFRNSGLLKKFIEEGREYCFLSNIDNLGATVDLNILNKLVGEERATTPVEFVMEVTDKTRADVKGGTLIQMENKLRLLEIAQVPPEHVDDFKSVKTFKFFNTNNIWANLAAIDRVLRERTLNMEIIVNNKTLENGTRVIQLETAVGAAMKCFDGAIGINVPRSRFLPVKKSSDLLLVMSNLYTLKNGSLVMSPQRMFPTTPLVKLGENHFSKVKEFLGRFANIPDIIELDHLTVSGDVTFGRGVSLRGTVIIIANHGDRIDIPAGAILENKIVSGNMRILDH
Protein: Exocrine gland secreted peptide 3 (J3QN49)
Organism: Mus musculus (Mouse)
Interaction partners:
- Predicted gene 1330.
- Predicted gene 12887
- ABPA19
Sequence:
MEKATPAKTMDQESKFHVSGMASLPVMFFFIILLLPSMLTEGRILTQTQKEPTISADHQKNPKAVTLVSQREPNIQEDFERMLCAID
Protein: Ephrin-B1 (EFL-3) (ELK ligand) (ELK-L) (EPH-related receptor tyrosine kinase ligand 2) (LERK-2) [Cleaved into: Ephrin-B1 C-terminal fragment (Ephrin-B1 CTF); Ephrin-B1 intracellular domain (Ephrin-B1 ICD)] (P98172)
Organism: Homo sapiens (Human)
Function: Cell surface transmembrane ligand for Eph receptors, a family of receptor tyrosine kinases which are crucial for migration, repulsion and adhesion during neuronal, vascular and epithelial development. Binding to Eph receptors residing on adjacent cells leads to contact-dependent bidirectional signaling into neighboring cells. Shows high affinity for the receptor tyrosine kinase EPHB1/ELK. Can also bind EPHB2 and EPHB3. Binds to, and induces collapse of, commissural axons/growth cones in vitro (By similarity). May play a role in constraining the orientation of longitudinally projecting axons (By similarity).
Subcellular location: Cell membrane {ECO:0000269|PubMed:10197531, ECO:0000269|PubMed:7973638}; Single-pass type I membrane protein {ECO:0000255}. Membrane raft {ECO:0000269|PubMed:10197531}. Note=May recruit GRIP1 and GRIP2 to membrane raft domains. {ECO:0000269|PubMed:10197531}.; SUBCELLULAR LOCATION: [Ephrin-B1 C-terminal fragment]: Cell membrane {ECO:0000269|PubMed:16930449}; Single-pass type I membrane protein {ECO:0000305}.; SUBCELLULAR LOCATION: [Ephrin-B1 intracellular domain]: Nucleus {ECO:0000269|PubMed:16930449}. Note=Colocalizes with ZHX2 in the nucleus. {ECO:0000250|UniProtKB:P52795}.
Interaction partners:
- Ephrin type-B receptor 1
- Ephrin type-B receptor 3
- Ephrin type-B receptor 6
- Ephrin type-B receptor 4
- Ephrin type-B receptor 2
- Ephrin type-A receptor 4
- Ephrin type-A receptor 1
- Cytoplasmic protein NCK2
- Regulator of G-protein signaling 3
- Ephrin type-A receptor 10
Sequence:
MARPGQRWLGKWLVAMVVWALCRLATPLAKNLEPVSWSSLNPKFLSGKGLVIYPKIGDKLDIICPRAEAGRPYEYYKLYLVRPEQAAACSTVLDPNVLVTCNRPEQEIRFTIKFQEFSPNYMGLEFKKHHDYYITSTSNGSLEGLENREGGVCRTRTMKIIMKVGQDPNAVTPEQLTTSRPSKEADNTVKMATQAPGSRGSLGDSDGKHETVNQEEKSGPGASGGSSGDPDGFFNSKVALFAAVGAGCVIFLLIIIFLTVLLLKLRKRHRKHTQQRAAALSLSTLASPKGGSGTAGTEPSDIIIPLRTTENNYCPHYEKVSGDYGHPVYIVQEMPPQSPANIYYKV
Protein: UPF0122 protein SP_1288 (Q97QD1)
Organism: Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)
Function: Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY/ffh. May be a regulatory protein.
Interaction partners:
Sequence:
MEIEKTNRMNALFEFYAALLTDKQMNYIELYYADDYSLAEIAEEFGVSRQAVYDNIKRTEKILEDYEMKLHMYSDYIVRSQIFDQILERYPKDDFLQEQIEILTSIDNRE
Protein: Tropomyosin 4a (F1R412)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Subcellular location: Cytoplasm, cytoskeleton {ECO:0000256|ARBA:ARBA00004245}.
Interaction partners:
- Troponin T type 2a
- Troponin I, fast skeletal muscle
- Tnnt3b protein)
- Sk-tropomodulin
- Troponin I type 1b
- Tropomodulin 2.
- Myosin light chain 2 Mlc2a
- Fast muscle troponin I, tandem duplicate 4)
- Troponin T type 1
- Novel slow skeletal troponin T family protein
Sequence:
MEAIKKKMQMLKLDKENAIDRAEQAETEQKAAEDKCKQLDDELVGLQKKLKQTEDELDKYSEALKDAQEKLELSEKKAADAEGDVAALNRRIQLVEEELDRAQERLGTALQKLEEAEKAADESERGMKVIENRAMKDEEKMEIQEMQLKEAKHIAEEADRKYEEVARKLVILEGELERAEERAEVAECKASDLEEELKNVTNNLKSLEAQAEKYSEKEDKYEEEIKVLSDKLKEAETRAEFAERTVAKLEKSIDDLEEKLSSAKEENLGMHQVLDQTLQELNSL
Protein: Cytidylate kinase (CK) (EC 2.7.4.25) (Cytidine monophosphate kinase) (CMP kinase) (P9WPA9)
Organism: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Subcellular location: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00238}.
Interaction partners:
- GTPase Der
- Uncharacterized RNA pseudouridine synthase Rv1711
- Possible segregation and condensation protein ScpB
- Segregation and condensation protein A
- Nucleoside diphosphate kinase
- Small ribosomal subunit protein bS1
- 3-phosphoshikimate 1-carboxyvinyltransferase
- Vitamin B12-dependent ribonucleoside-diphosphate reductase
- Ribonucleoside-diphosphate reductase subunit alpha
- Ribonucleoside-diphosphate reductase subunit beta nrdF2
Sequence:
MSRLSAAVVAIDGPAGTGKSSVSRRLARELGARFLDTGAMYRIVTLAVLRAGADPSDIAAVETIASTVQMSLGYDPDGDSCYLAGEDVSVEIRGDAVTRAVSAVSSVPAVRTRLVELQRTMAEGPGSIVVEGRDIGTVVFPDAPVKIFLTASAETRARRRNAQNVAAGLADDYDGVLADVRRRDHLDSTRAVSPLQAAGDAVIVDTSDMTEAEVVAHLLELVTRRSEAVR
Protein: Heat shock transcription factor 4 (E5RK26)
Organism: Homo sapiens (Human)
Subcellular location: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
Interaction partners:
Sequence:
MQEAPAALPTEPGPSPVPAFLGKLWALVGDPGTDHLIRWSPSGTSFLVSDQSRFAKEVLPQYFKHSNMASFVRQLNMYGFRKVVSIEQGGLLRPERDHVEFQHPSFVRGREQLLERVRRKVPALRGDDGRWRPEDLGRLLGEVQALRGVQESTEARLRELRQQNEILWREVVTLRQSHGQQHRVIGKLIQCLFGPLQAGPSNAGGKRKLSLMLDEGSSCPTPAKFNTCPLPGALLQDPYFIQSPLPETNLGLSPHRARGPIISDIPEDSPSPEGTRLSPSSDGRRGPLGLESGDRSPESLLPPMLLQPPQESVEPAGPLDVLGPSLQGREWTLMDLDMELSLMQPLVPERGEPELAVKGLNSPSPGKDPTLGAPLLLDVQAALGGPALGLPGALTIYSTPESRTASYLGPEASPSP
Protein: Stonewall, isoform B (M9PI58)
Organism: Drosophila melanogaster (Fruit fly)
Subcellular location: Nucleus {ECO:0000256|PROSITE-ProRule:PRU00371}.
Interaction partners:
Sequence:
MMGDFLFENSCLEKCKRRWRQLRNDYTRWCNADANRRRNGQRRLAYPLADELRFLDRHLNIADDMAADDDRSVSSDKDRDNNRDSEGVDHHAQASLKERASSTSKLVKEVKLASQVRKEKSSQDKRENWENPGDKQRSRKKSAEEKLNDLEESDEPEKVPELDSFLQSDNEDDECMDEEHLEDLEGFDFDLEQSNQEKELTPEKSLEKNNTDSTVSQPEFFVKQTRDPRLLIIGRKNSTSSFAESKASKSISGDPLETAMEDSGDEYGRDGEKRVTGSDTTSPTRRPRRAARASISFAGIRDLPIQKPGQAQRMTRLQRRKSMSLAAVHSVRSSTSPVKMTPVPRSQPINKPPSGPVQITKISHRDDIFPRPAVPSGVVNINQNQLKTQQQQKTLIFPTTDEAIANPQGSGPPQRRSVGRPPKKLPMVQRIVAPETQTKPQSPINTKVLTIGKPTSSVASGNINNIAIKSNVVTSISSSTATTNTITKGTSNNSIKTTENVNVISYSPNSSSTSSSSKATTGASGAVITNIPTTTTAGTSVPVGKSITQLKMTERGTQTGVQNPFSDNYFLEMIKPQMQEMNPRQKMHFKKKVFQALMETFDDATDFPTSKELQHFNINTPSGFEHITDPELRLVRELVSMVSAAKVTLIRPPGEATAIATASRSGIAPEVQRGPRTNMTRQVIQRVYKPGTGQEIAPTSPAGGLDKRLFRLAAMGGKPNGNLSATQEILRKDSVDSNHSVVKVANHAPTGSPKGAAVVAAIRPQGSLINSFFGQGNGPTTAKGAASENIRAMSRRYSVCGSSNPPNAQNASQGSANGSTINSNASAMEASMLKRRLIAAGHGMVPPTQRPRYSAVGASQMTTASQGSSLLVRKSVGCVPAYQKQISPTGGASLLQKTPQIASVQGSAFNDFAQPKPAATASVNGEESSPTSALKRSLVVANTKTSFQDLLQQASQTVQRNKIESSETAATIAADDFSLDNLKREPVDPAEDHNDILGV
Protein: Portal protein B (GpB) (Minor capsid protein B) [Cleaved into: Protein B*] (P03710)
Organism: Escherichia phage lambda (Bacteriophage lambda)
Function: Forms the portal vertex of the capsid. This portal plays critical roles in head assembly, genome packaging, neck/tail attachment, and genome ejection (Probable). The portal protein multimerizes as a single ring-shaped homododecamer arranged around a central channel. Binds to the terminase subunits to form the packaging machine.
Subcellular location: Virion {ECO:0000255|HAMAP-Rule:MF_04135, ECO:0000269|PubMed:6228056}.
Interaction partners:
Sequence:
MKTPTIPTLLGPDGMTSLREYAGYHGGGSGFGGQLRSWNPPSESVDAALLPNFTRGNARADDLVRNNGYAANAIQLHQDHIVGSFFRLSHRPSWRYLGIGEEEARAFSREVEAAWKEFAEDDCCCIDVERKRTFTMMIREGVAMHAFNGELFVQATWDTSSSRLFRTQFRMVSPKRISNPNNTGDSRNCRAGVQINDSGAALGYYVSEDGYPGWMPQKWTWIPRELPGGRASFIHVFEPVEDGQTRGANVFYSVMEQMKMLDTLQNTQLQSAIVKAMYAATIESELDTQSAMDFILGANSQEQRERLTGWIGEIAAYYAAAPVRLGGAKVPHLMPGDSLNLQTAQDTDNGYSVFEQSLLRYIAAGLGVSYEQLSRNYAQMSYSTARASANESWAYFMGRRKFVASRQASQMFLCWLEEAIVRRVVTLPSKARFSFQEARSAWGNCDWIGSGRMAIDGLKEVQEAVMLIEAGLSTYEKECAKRGDDYQEIFAQQVRETMERRAAGLKPPAWAAAAFESGLRQSTEEEKSDSRAA
Protein: ABC transporter, putative (Q57Y09)
Organism: Trypanosoma brucei brucei (strain 927/4 GUTat10.1)
Interaction partners:
- ABC transporter, putative
- Peroxin 19
- DNA repair protein RAD51 homolog
- Peroxisomal membrane protein PEX14
Sequence:
MTVFELCKEYIASRSRNHELCACMLTGGVAAILAASAGLRSNKPLPLKAERSKPASSVNGKEAQAQDKVKVQSFAAAVRRFLALLEIAIPSIRSRESGMLMIISLLLISRTFLSLRITSVAAAVDKSAISGNPATVVRVVGLLLCWFAPVALANTTLRYCVGMLGLRLQSNLAHHLHRIYLNNDVFFAVASSHSVKNIDERITRHVASWSRNVAGFFTSILEPLINIVAFSYKVGSTSGSRTLAMVIGYYALFVAIAQKFSPDMEGLVAEQLSREGTLITAHNRLLKYAEELVMSKGQLFHRNLMNQYLESIVQHRSRAAFVQGRYGLMENLFLKYGSRILSNFVCLGVVLSRNTEATSGQDLLALFAETSYVFMKLSQGIGGLVRNCRGFFVLRSLTDEIYELQESIQHATEVQRTSRRALDDAPKGSAGEIVRGDYIAFENVPIILPTNEMLCRGLTLHVKPGMNLLIVGANGCGKSSLLRLLAGLWPLHGGRIVKPRMDQIYYVPQRPYVPCGTLRSQITYPKQLSELEVSESMLYECLEMAKLEDILSRPHITWDTVFSWSDGLLSLGEMQKLAIARLFYHRPHFAVLDECSSNMDIEIEERLYSMCKQLGISLISITHRRTVWRHHNWVLWFNDLGSFMFSPLSFNEHGTAVLTRVVAATDSSMIGRQVTLDVSDGKQ
Protein: Cytidine deaminase (EC 3.5.4.5) (Cytidine aminohydrolase) (Q9VLR3)
Organism: Drosophila melanogaster (Fruit fly)
Interaction partners:
- GH09623p
- Uridine phosphorylase
- FI09636p
- Uridine kinase
- purine-nucleoside phosphorylase
- Cytidine deaminase
- cytidine deaminase
- Esterase P
- GH07829p
- Esterase-6
Sequence:
MTQVFINGARDDLNVREFQSLDPSIQEIILAATEARKQAYCPYSNFAVGAALRTSDGTIYSGCNIENGAYATCICAERTAAVKAISEGKRDFVACAVVAQQDNGFTTPCGVCRQFLSEFVNGKDIPLYAAKPTNLPLRVLCTSVLQLLPNGFSFANGK
Protein: Adaptor related protein complex 3 subunit delta 1 (B5DFK6)
Organism: Rattus norvegicus (Rat)
Subcellular location: Endomembrane system {ECO:0000256|ARBA:ARBA00004184}; Peripheral membrane protein {ECO:0000256|ARBA:ARBA00004184}.
Interaction partners:
- AP-3 complex subunit mu-1
- AP-3 complex subunit beta
- AP-3 complex subunit beta.
- AP complex subunit sigma
- AP-3 complex subunit mu-2
- Adaptor related protein complex 3 subunit sigma 1
- AP-2 complex subunit sigma
- AP-2 complex subunit mu
- AP-2 complex subunit beta
- Arpin
Sequence:
MALKMVKGSIDRMFDKNLQDLVRGIRNHKEDEAKYISQCIDEIKQELKQDNIAVKANAVCKLTYLQMLGYDISWAAFNIIEVMSASKFTFKRVGYLAASQCFHEGTDVIMLTTNQIRKDLSSPSQYDTGVALTGLSCFVTPDLARDLANDIMTLMSHTKPYIRKKAVLIMYKVFLKYPESLRPAFPRLKEKLEDPDPGVQSAAVNVICELARRNPKNYLSLAPLFFKLMTSSTNNWVLIKIIKLFGALTPLEPRLGKKLIEPLTNLIHSTSAMSLLYECVNTVIAVLISLSSGMPNHSASIQLCVQKLRILIEDSDQNLKYLGLLAMSKILKTHPKSVQSHKDLILQCLDDKDESIRLRALDLLYGMVSKKNLMEIVKKLMTHVDKAEGTTYRDELLTKIIDICSQSNYQHITNFEWYISILVELTRLEGTRHGHLIAAQMLDVAIRVKAIRKFAVSQMSSLLDSAHLVASSTQRNGICEVLYAAAWICGEFSEHLQGPQQTLEAMLRPKVTTLPGHIQAVYVQNVVKLYASILQQKEQAADTEGAQEVTQLLVERLPQFVQSADLEVQERASCILQLVKHVQKLQAKGVPVAEEVSALFAGELNPVAPKAQKKVPVPEGLDLDAWINEPPSDSESEDEKPKAIFHEEEPRHTRRRQPEEDEEELARRREARKQEQANNPFYIKSSPSPQKRYQDAPGVEHIPVVQIDLSVPLKVPGMPMSDQYVKLEEQRRHRQRLEKDKKRKKKEKGKRRHSSLPTESDEDIAPAQRVDIITEEMPENALPSDEDDKDPNDPYRALDIDLDKPLADSEKLPVQKHRNAETVKSPEKEGVPGVEKKSKKPKKKEKKPKEREREKKDKKGEDLDFWLSTTPPPAAAPVPAPSTEGLAASIVTPPKGECEVLKGEEPQDEEDHMDHDQERKSSRHKKKKHRKEKEERPRDKKKAKRKQVVQLENGAPAEEEEEEEEPIPPMSSYCLLAENPYIKVTYDVQASLQKDSQVTVSIILENQSSSFLKNMELNVLDSLNTKMARPEGSSVHDGVPVPFQLPPGVSNEAQFVFTIQSIVMAQKLKGTLSFIAKDDEGATHEKLDFRLHFSCSSYLITTPCYSDAFAKLLESGDLSMNSIKVDGISISFQNLLAKICFYHHFSVVERVDSCASMYSRSIQGHHVCLLVKKGESSVSVDGKCSDATLLSSLLEEMKTTLSQC
Protein: Glypican-6 [Cleaved into: Secreted glypican-6] (Q9R087)
Organism: Mus musculus (Mouse)
Function: Cell surface proteoglycan that bears heparan sulfate. Putative cell surface coreceptor for growth factors, extracellular matrix proteins, proteases and anti-proteases. Enhances migration and invasion of cancer cells through WNT5A signaling (By similarity).
Subcellular location: Cell membrane {ECO:0000250}; Lipid-anchor, GPI-anchor {ECO:0000250}; Extracellular side {ECO:0000250}.; SUBCELLULAR LOCATION: [Secreted glypican-6]: Secreted, extracellular space {ECO:0000250}.
Interaction partners:
- Glypican-4
- Syndecan-3
Sequence:
MPSWIRAVILPLSGLLLTLPAAADVKARSCSEVRQAYGAKGFSLADIPYQEIAGEHLRICPQEYTCCTTEMEDKLSQQSKLEFENLVEETSHFVRTTFVSRHKKFDEFFRELLENAEKSLNDMFVRTYGMLYMQNSEVFQDLFTELKRYYTGGNVNLEEMLNDFWARLLERMFQLINPQYHFSEDYLECVSKYTDQLKPFGDVPRKLKIQVTRAFIAARTFVQGLTVGREVANRVSKVSPTPGCIRALMKMLYCPYCRGLPTVRPCNNYCLNVMKGCLANQADLDTEWNLFIDAMLLVAERLEGPFNIESVMDPIDVKISEAIMNMQENSMQVSAKVFQGCGQPKPAPALRSARSAPENFNTRFRPYNPEERPTTAAGTSLDRLVTDIKEKLKLSKKVWSALPYTICKDERVTAGTSNEEECWNGHSKARYLPEIMNDGLTNQINNPEVEVDITRPDTFIRQQIMALRVMTNKLKNAYNGNDVNFQDTSDESSGSGSGSGCMDDVCPTEFEFVTTEAPAVDPDRREEESSASKFSSSLISWSLVCMVLALQRLYR
Protein: Cfl11p (Q59PZ9)
Organism: Candida albicans (strain SC5314 / ATCC MYA-2876) (Yeast)
Subcellular location: Membrane {ECO:0000256|ARBA:ARBA00004141}; Multi-pass membrane protein {ECO:0000256|ARBA:ARBA00004141}.
Interaction partners:
- Uncharacterized protein
Sequence:
MNSIAFILTSLLCIPIVVIAESLSLPKNSIQSAKSIFACKLNVHEEVKYCNTNSPEDYGCICSNKDAIMEFVGCYAYSQKDPHEAIDFFVEFCQEYGNTTVDMDSIYTAYENYTAKGYYNVSMPSSNHHNHSNNSNVFEPNLPKEKMANYTNSLKLAIDQYLVNWDNTFYYGAGILGYWALVILIAAISNWTRALFPGLMTDLTGPLSNWWRQNISLPATFGSKKSQSSTLYRFLDFYIPSRFESIVITGFVIVCIITLSINTYFAQGDELIHSSYDARLRYVANRTGTNSTMMLPLVILFAGRNNILQFITGWNYTTFLTFHRHIARMMFAFVVIHAGCFTIALGSSYGPVMKLPFMIWGTAATVIAGLMLFQGMLYLRRKWYEVFLIGHIILAIFFIIGTWIHVVDFGYMWYIYAAIAFWGFDRFIRVARLLCFGFQLATITLLPGETMRVVISKPKDWVASPGSYVFVSFFTPKYFWQSHPFTISTSTESTITLYCKVKEGVTQALYKDLLNSPNKTIKIRAGVEGPYGELSGAKTAESAVFVAGGNGIPGMYSEATHLASRRSIRSSKKIKLYWIVRDYRLVQWYYEELQSLQRTNIETVVYVTRPNDSLEEVASNFTSSNFDEKSCYSLGDSKTMISCNSKYTLNLKKDNNNNNNYHRVKELIKDELSHILFVEGRPNLQKMVEQELEEAGRSIAFVTCAHPAMVDELRCQVIKVINNPEKKRVDFYDQLQGWS
Protein: Type II secretion system protein, putative (Q3Z6T4)
Organism: Dehalococcoides mccartyi (strain ATCC BAA-2266 / KCTC 15142 / 195) (Dehalococcoides ethenogenes (strain 195))
Interaction partners:
- Type II secretion system protein GspE
- Pilin biogenesis protein, putative
- Type II secretion system protein, GspI/GspJ family
Sequence:
MKIKLLKYRQKQGGFTLVELLVALAITGLIMAGLTTSVFQLFTITQRSSDHMTIIRHLDITSSWLSNDIQMANEQPEWDSGTHTLTIRQTRSLADPTDPESAITDYIITYTYNTATGTLTRTQLRLLDNSTQISLIAEYVSGIMYEDELASNEQSGAVDIKIIITLNTQTEERILHIKPRISST
Protein: Similar to protocadherin-3 (Pcdh3) (O95883)
Organism: Homo sapiens (Human)
Subcellular location: Membrane {ECO:0000256|ARBA:ARBA00004167}; Single-pass membrane protein {ECO:0000256|ARBA:ARBA00004167}.
Interaction partners:
Sequence:
MVCYIQENLPFLLKPSVENFYILITEGALDREIRAEYNITITVTDLGTPRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSLLPPQDPHLPLASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPALSREALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHLLLVDGFSQPYLPLPEAAPAQAQAEADLLTVYLVVALASVSSLFLLSVLLFVAVRLCRRSRAASVGRCSVPEGPFPGHLVDVRGAETLSQSYQYEVCLTGGPGTSEFKFLKPVISDIQAQGPGRKGEENSTFRNSFGFNIQ
Protein: UMP kinase (EC 2.7.4.22) (Uridine monophosphate kinase) (Q94JR1)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Interaction partners:
- Ribosome-recycling factor, chloroplastic
- Polyprotein of EF-Ts, chloroplastic
- Elongation factor Ts, mitochondrial
- Ribosome-recycling factor, chloroplastic
- Homeodomain-like superfamily protein
- Trihelix transcription factor GTL2
- Small ribosomal subunit protein uS2y
- Small ribosomal subunit protein uS2z
- Small ribosomal subunit protein uS2m
- Small ribosomal subunit protein uS2c
Sequence:
MASCDDDFSLLGDDQSNPNQHHHHHQVLHHTPYAPRRFNPKPSNQILLPHHQRNGDEDDENDVVVEASSAFHGHGVNPFTADENSNPYDDNNAAVDEDEDEDLGANRSRIGGVRVEKRQSQEELSDGGTTNGGEITPYGSFKRPRTSSSSAGEYRKDREEWSDAAIACLLDAYSDKFTQLNRGNLRGRDWEEVASSVSERCEKLSKSVEQCKNKIDNLKKRYKLERHRMSSGGTAASHWPWFKKMEDIVGNSLALKGASDEDRSGSSMGNTVKPARRYPLVTYNPGVQINNVKSKATSNPRWRRVVLKISGAALACTGPNNIDPKVINLIAREVAMACRLGVEVAIVVGSRNFFCGSTWVTATGLDRTTAYHISMMASVMNSALLQSSLEKIGVQARLQTAISVQGVGEPYNRQRATRHLDKGRVVIFGGIGATLGNPLLSSDASAALRAIDINAEAVVKGTNVDGVYDCHSQDSNVTFEHISFQDLASRGLTSMDTMALNFCEENSIPVVVFNFLEAGNITKALCGEQVGTLIDRSGRGVS