wanglab/gogpt-training-data huggingface dataset:
Protein: Lamin-like protein (Protein NE81) (Q54HI5)
Organism: Dictyostelium discoideum (Social amoeba)
Function: Component of the nuclear lamina, a fibrous layer on the nucleoplasmic side of the inner nuclear membrane. Helps to maintain integrity of nuclear structures in response to mechanical stress.
Subcellular location: Nucleus lamina {ECO:0000250|UniProtKB:P14733}. Nucleus envelope {ECO:0000269|PubMed:19466752}. Nucleus inner membrane {ECO:0000269|PubMed:22090348}.
Interaction partners:
- Sun domain-containing protein 1
- MAP kinase phosphatase with leucine-rich repeats protein 2
- Protein farnesyltransferase subunit beta
- Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha
- Centrosomal protein 224
Sequence:
MDMSKKKSKRASPIESSQEEIAISTSKTATTEKPKKTKTTTKKKASQPSQEVVMETESEVEITTTTTSTSTTNNNNITTTSTSSQQSNGTLSSSSSPTIQSIPTTPISKYIPSLSQIGTPLSPNRAAQRLREKDELSLIHNRLKSALKKLESAETELEKKNQEYEELDQKHTATIKQLKQRSDQVEKQLIEEQNQNSDLTSNRNILENELKSKESVWKKEKDEILLKFQESINKLNQENSLAQSQLKSEIVSKEYEIDGLKSEINRLKDDLQYRIREGEEKSRKLLENEYNRFKGKEEEYNQLIVSKDEEIKKYKFELKEKEKSSNAMNKKENELNNLIQAHERQIEDMRDSINREWELKAAQMMEEHHARTIHLQQAVDSFNEEKERIKSQMETLNGQIEDINIKNNEYEDRIKEMNVLLSQKDNSIGELGVEIEESKKKMRKQMADLKSKDGQIALLQIEINTKDNKCNTLQTETNRLKSELYSITNQIDPEIPLDPEINSLKELVKGFEKTVDDRKRKRSKLQHEFNAAANQDQNGMTIEEQSSTSTTTTTSATGSSSSTSHLDNIDSSKLPTGPEQSELFNPDTVSFSLVDSNQEFIKLSVHGDMDNGLSISKWRLIVVKPDGSKSGFSFPDGIQPFKGIKSVTVWTGRPRPQGTPTENEFYWARTELWTSPVEGTIVKLVSPSEETTTVTLPADGIYQKPSSAGKSNCLIM
Protein: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) (O51175)
Organism: Borreliella burgdorferi (strain ATCC 35210 / DSM 4680 / CIP 102532 / B31) (Borrelia burgdorferi)
Interaction partners:
- Glucosamine-6-phosphate deaminase
- Pts system, iibc components
- Putative N-acetylmannosamine-6-phosphate 2-epimerase
- Pts system, fructose-specific iiabc component
- 6-phosphogluconolactonase
- Pts system, maltose and glucose-specific iiabc component
- protein-N
- Glycine betaine, L-proline ABC transporter, permease protein
Sequence:
MPNFCLFNSKSVLTGNDKIDNSAVLIKDNKIFDIVTSDRLKKMDLEEYQMIDTKGNYITPGLYDNHIHGFHGHGTDQCSTESILKMSEHLAQYGVVGFLPTLYPRPIDEMIKTIKACIAAIGKEKGAKILGLHLEGPFFSPEKKGAHPVSYLHEPSIEVMQKLIDAAGGVFTGSNGKRKTHISTMTVAPELKGMRELAIFCLENNINLQAGHTNATYENMIEGFQVGILHTTHFFNAMSKLDHRNPNAIGAVLIHGDVSCEIIADGHHIHPKLILMLRKLKDISKIVLVTDGLTPNCQTCGKLIANGDEVYIAEDGLFHSVKSNTIAGSTLTMIQGLKNLIEFGFSLSDAVQASSYNPTRILNIDKKGLICHGYDANLNVLDKDFNLKLTMIESKIIFNNL
Protein: ESAG8-associated protein, putative (Q583P9)
Organism: Trypanosoma brucei brucei (strain 927/4 GUTat10.1)
Interaction partners:
- PSP1 C-terminal domain-containing protein
Sequence:
MSHFQPSPCFNTFSSFLQEITNIGSSGIDTENKENIPPGSFGRLNDGKGGCRRNSSHTCFRKQQQHQEQHQQQQFHNIPRVNDCCTPMKEVTYQQQQCHTGLTPGNKYMMNSANRDYPVGMNGIDFLLLDESDVFDGRDNGFFTPNVKRQGGVTGNHGKVSELFHESMEAPRLARNLNDSIEGVPLVGNVLQESDDEDCLDSYRPTEMSSTQIFNPRLQGQESRHCPQDHCSYQKQVHQQPSDRSHLLGSAWCETAPRPKPQPERNHTATRVTHGTTPLVAVAGRRVPVDKLHLLLGATAQDGVDGQSGARDAVNTVPLVPSSRPTPSAAQTFKVIPLARPSEPSVSPSPLATTPQNTVAGPTTRRLASSLFHKEMVVIDFGKGNIMRFKPNPAFPPPVPGKRYLVAVRASRSPYDNVAYKDAGLCSYVLRHPADGSGSNGTSATANITITKSSGDVERGIFDGSIIRCMDTPGDAVQLQLLAVEREAAIVECRKHFKFLNLPFELVDVHYTFDRTICVVYYNIHRQEGTSGHPNVSRLVRTLQFRLKCKVHLKADFCSD
Protein: Two-component response regulator ARR1 (Q940D0)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Transcriptional activator that binds specifically to the DNA sequence 5'-[AG]GATT-3'. Functions as a response regulator involved in His-to-Asp phosphorelay signal transduction system. Phosphorylation of the Asp residue in the receiver domain activates the ability of the protein to promote the transcription of target genes. Could directly activate some type-A response regulators in response to cytokinins. Regulates SHY2 by binding to its promoter. Involved in the root-meristem size determination through the regulation of cell differentiation.
Subcellular location: Nucleus {ECO:0000255|PROSITE-ProRule:PRU00625, ECO:0000269|PubMed:11135105}.
Interaction partners:
- Histidine-containing phosphotransfer protein 3
- Histidine-containing phosphotransfer protein 5
- Histidine kinase 3
- Histidine-containing phosphotransfer protein 4
- Pseudo histidine-containing phosphotransfer protein 6
- Histidine kinase 2
- Histidine-containing phosphotransfer protein 1
- Histidine-containing phosphotransfer protein 2
- Auxin-responsive protein IAA3
- DELLA protein RGA
Sequence:
MMNPSHGRGLGSAGGSSSGRNQGGGGETVVEMFPSGLRVLVVDDDPTCLMILERMLRTCLYEVTKCNRAEMALSLLRKNKHGFDIVISDVHMPDMDGFKLLEHVGLEMDLPVIMMSADDSKSVVLKGVTHGAVDYLIKPVRMEALKNIWQHVVRKRRSEWSVPEHSGSIEETGERQQQQHRGGGGGAAVSGGEDAVDDNSSSVNEGNNWRSSSRKRKDEEGEEQGDDKDEDASNLKKPRVVWSVELHQQFVAAVNQLGVEKAVPKKILELMNVPGLTRENVASHLQKYRIYLRRLGGVSQHQGNLNNSFMTGQDASFGPLSTLNGFDLQALAVTGQLPAQSLAQLQAAGLGRPAMVSKSGLPVSSIVDERSIFSFDNTKTRFGEGLGHHGQQPQQQPQMNLLHGVPTGLQQQLPMGNRMSIQQQIAAVRAGNSVQNNGMLMPLAGQQSLPRGPPPMLTSSQSSIRQPMLSNRISERSGFSGRNNIPESSRVLPTSYTNLTTQHSSSSMPYNNFQPELPVNSFPLASAPGISVPVRKATSYQEEVNSSEAGFTTPSYDMFTTRQNDWDLRNIGIAFDSHQDSESAAFSASEAYSSSSMSRHNTTVAATEHGRNHQQPPSGMVQHHQVYADGNGGSVRVKSERVATDTATMAFHEQYSNQEDLMSALLKQEGIAPVDGEFDFDAYSIDNIPV
Protein: THO complex subunit 7B (THO complex subunit 7) (AtTHO7) (Q9M8T6)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Acts as component of the THO subcomplex of the TREX complex which is thought to couple mRNA transcription, processing and nuclear export.
Subcellular location: Nucleus {ECO:0000305}.
Interaction partners:
- THO complex subunit 2
- THO complex subunit 5A
- THO complex subunit 6
- THO complex subunit 1
- THO complex subunit 3
- THO complex subunit 5B
- Kinase interacting
- Kinase-interacting family protein
- DEAD-box ATP-dependent RNA helicase 56
- DEAD-box ATP-dependent RNA helicase 15
Sequence:
MSVKARRISGRLETVVTKVNYAFDPVDDDKIIRNRLLTRTTTTRGEPPLKKLQKKFTSFVLEVDKEEENYNDCGRLAKAFLQELSTFEIPLLKSQAVVEANLREKESFNEVKDETERQIMQAKAEIEDLKKQLEESKIDRQHKEECETIRKLISAQPPRSETEKVIYELNKEIAELEAESTASWRLLELRKKQFALLMHVVDELQNTMEDEQKSLVDEIRSASEDQRNITDAMSVD
Protein: Lysosomal Pro-X carboxypeptidase (EC 3.4.16.2) (Proline carboxypeptidase) (Prolylcarboxypeptidase) (PRCP) (Q2TA14)
Organism: Bos taurus (Bovine)
Function: Cleaves C-terminal amino acids linked to proline in peptides such as angiotensin II, III and des-Arg9-bradykinin. This cleavage occurs at acidic pH, but enzymatic activity is retained with some substrates at neutral pH (By similarity).
Subcellular location: Lysosome {ECO:0000250}.
Interaction partners:
- Neprilysin
- Angiotensin-converting enzyme 2
- Dipeptidyl peptidase 4
- Meprin A subunit
- Xaa-Pro aminopeptidase 2
- Prolyl endopeptidase
- Plasma kallikrein
- SH3 domain-binding protein 5
Sequence:
MGRCSLLLLLLLIAFLTPGAANPVSPSLRAPSSLPWSTSFRSRPTITLKYSIRYIQQKVDHFGFNIDRTFKQRYLIADNYWKEDGGSILFYTGNEGDIIWFCNNTGFMWDIAEEMKAMLVFAEHRYYGESLPFGADSFSDSRHLNFLTTEQALADFAKLIRYLKRTIPGARNQHVIALGGSYGGMLAAWFRMKYPHLVVGALASSAPIWQFNDLVPCDIFMKIVTTDFSQSGPNCSESIRRSWDAINRLAKKGTGLRWLSEALHLCTPLTKSQDVQRLKDWISETWVNVAMVDYPYESNFLQPLPAWPVKVVCQYFKYSNVPDTVMVQNIFQALNVYYNYSGQAKCLNVSETATSSLGVLGWSYQACTEMVMPTCSDGVDDMFEPHSWNMKEYSDDCFKQWGVRPRPSWIPTMYGGKNISSHTNIIFSNGELDPWSGGGVTKDITDTLLAIVIPNGAHHLDLRASNALDPVSVQLTRSLEVKYMKQWISDFYVRLRKMN
Protein: Peptidyl-prolyl cis-trans isomerase FKBP15-1 (PPIase FKBP15-1) (EC 5.2.1.8) (15 kDa FK506-binding protein) (15 kDa FKBP) (FK506-binding protein 15-1) (AtFKBP15-1) (FK506-binding protein 2-1) (Immunophilin FKBP15-1) (Rotamase) (Q38935)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides (By similarity).
Subcellular location: Endoplasmic reticulum lumen {ECO:0000255|PROSITE-ProRule:PRU10138}.
Interaction partners:
- Peptidyl-prolyl cis-trans isomerase FKBP20-2, chloroplastic
- Peptidyl-prolyl cis-trans isomerase FKBP16-1, chloroplastic
- Peptidyl-prolyl cis-trans isomerase CYP59
- Photosynthetic NDH subunit of lumenal location 5, chloroplastic
- DNA
- Serine/threonine-protein kinase TOR
Sequence:
MMSSASAMKAVGFLLLLTILTLAYAKKSGDVTELQIGVKYKPQKCDLQAHKGDKIKVHYRGKLTDGTVFDSSFERGDPIEFELGTGQVIPGWDQGLLGACVGEKRKLKIPSKLGYGDNGSPPKIPGGATLIFDTELVAVNGEPSSEAKSKNEL
Protein: Nuclear receptor corepressor 1 (C9JAP0)
Organism: Homo sapiens (Human)
Interaction partners:
Sequence:
MSSSGYPPNQGAFSTEQSRYPPHSVQYTFPNTRHQQEFAVPDYRSSHLEVSQASQLLQQQQQQQLRRRPSLLSEFHPGSDRPQERRTSYEPFHPGPSPVDHDSLESKRPRLEQVSDSHFQRVSAA
Protein: Ethylene-responsive protein (Q657Z3)
Organism: Oryza sativa subsp. japonica (Rice)
Subcellular location: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
Interaction partners:
Sequence:
MASSSSSSSLCDNHLLQDDLIPWPSMPFAPAPNTFGLNHQWSQPPMLSSSTDQLSSYELESLQSVESQLAAAAPPTLSPHLQAHQLSTVLMMQELGFQWSSCAAPADQHSIASSTNNNSNVMMNEEELRPRPDQSLISNPRSCSATTLLPPPHLHLDGAVLPSINVSRLQKLAAGDEPLQICCKRQAAAAAVVGHSSIRDEHVPCPYAGPPAHLIQGPSNTLQMKRNTNAAAQGRGGRHGSSTEHRSSTALPPSSKKPRLESHSSSMLPSFKVRKEKLGDRIAALQQLVSPFGKTDTASVLMEAIGYIKFLQDQVETLSGPYLRSSKNSKKLACRAAQQQRKGTSNGGDAAAKLDLRSRGLCLVPLSCTSYVTNENGVWPPPNFRGN
Protein: RE42507p (Stumps, isoform C) (Q1WWH6)
Organism: Drosophila melanogaster (Fruit fly)
Interaction partners:
Sequence:
MSVDNPYYFCNETKSPRTPDSQSSSRGFSIFKRRNSKGSSPRPLVMTNPEQMRLITSANLDTTATMALGSPRGSFNSLAGYPQHAIELQTMNMYRQRSANSHSEFRERLNSCNETHSSQCPGGGGASVAGDHDEVFNPLTSPTSSKSHRHHTLPSGGTRRHSLGNWAQHQHQQQHQQNSGAMGLGSPDEVPSMMAPRPPLLSPNKFRGSSHRRRDNCGNVNNTSGSSASGFLGSPGYNMDDILIITAKHSERAYLRATFLKNHFDKITKQRGRKPFNFLHIKIDDGPFSEEIAHKYQNTALQIVILCPALLALPHSFLMTQLSAIIRVEKVLAILLDVSEEKVKEMHKSALPSYYKWRRCVVRDNDQVQISNILGIATDILGRALCQRPPCQDSSGGGGGGLSRSFSSCTEGFTVLPKKVKLGQNKVVALLAEPLEKNDTLKLQVEKSGELIELRNFKCRNPYTLQFNIPEACMEISTMIEIRIEKNNKSLGARPIKCESRLRELEQLLRIEDSPIEFMCHALGIGPVERDALDQHLLQCFQRNMPPNFHLLSGPSERQPHFFTRLESSPEEYPTLLHFAARWGLNRLCIQLMECPGGDTACGVRNCAGRTPAELAEQEGHHKLAQNIVSFAEFHELTTMYHYFKGVTPPGESCPKPSANVVIEAHPVKAGKTNKPPKELPTAEYMEMSSGSERENTPEVRTKTETLAISNLNYISVETEDENLQASVAEKKVESEKKLPEAGNQPGPEKTTNELRINEPPYYQSKEQNQQPKELKNQSKSLDEVDAAPLYQTDKFSQECSQLLENQLGNDYVLQPSNVPVAQDDGNYLFQPSNRPVEEPLRLNRCTNRQPGYGTLKRSASDASAASHTRSNADDELAEIMHDFKNNVLSIRDVEVLVERWKHRNDVQQSFREKQDQIDQLRREYERIQEQVKSHLKRETPFERIKKFFLRSKTPGGNDSLLDETKSSIATSCSFKSAGGVSSSAGAGRPISSLSLQSVSSSSSSSGRLSTGSNCSGASLGDSGTHSDHEDRRFPHCRMMDNYMVPPTPRPVFTPSSTPGDERHQIVFPSPMSSCQRLNTPTSPTGSEHYQMFPSNIPVYGSQPLVGSQSSNYLNTIMEAKEQAETQHYQNQNGVTLQPIKLNERSNIIYGKLTKSSSASGCSSFKPKQIPVPCPQVGSIEVQAEVYQNVGDVAPEKDSKAEEETPNYMNC
Protein: Armadillo repeat-containing X-linked protein 3 (ARM protein lost in epithelial cancers on chromosome X 3) (Protein ALEX3) (Q9UH62)
Organism: Homo sapiens (Human)
Function: Regulates mitochondrial aggregation and transport in axons in living neurons. May link mitochondria to the TRAK2-kinesin motor complex via its interaction with Miro and TRAK2. Mitochondrial distribution and dynamics is regulated through ARMCX3 protein degradation, which is promoted by PCK and negatively regulated by WNT1. Enhances the SOX10-mediated transactivation of the neuronal acetylcholine receptor subunit alpha-3 and beta-4 subunit gene promoters.
Subcellular location: Mitochondrion outer membrane {ECO:0000250|UniProtKB:Q8BHS6}; Single-pass membrane protein {ECO:0000255}. Cytoplasm {ECO:0000250|UniProtKB:Q8BHS6}. Nucleus {ECO:0000250|UniProtKB:Q8BHS6}.
Interaction partners:
- Trafficking kinesin-binding protein 2
Sequence:
MGYARKVGWVTAGLVIGAGACYCIYRLTRGRKQNKEKMAEGGSGDVDDAGDCSGARYNDWSDDDDDSNESKSIVWYPPWARIGTEAGTRARARARARATRARRAVQKRASPNSDDTVLSPQELQKVLCLVEMSEKPYILEAALIALGNNAAYAFNRDIIRDLGGLPIVAKILNTRDPIVKEKALIVLNNLSVNAENQRRLKVYMNQVCDDTITSRLNSSVQLAGLRLLTNMTVTNEYQHMLANSISDFFRLFSAGNEETKLQVLKLLLNLAENPAMTRELLRAQVPSSLGSLFNKKENKEVILKLLVIFENINDNFKWEENEPTQNQFGEGSLFFFLKEFQVCADKVLGIESHHDFLVKVKVGKFMAKLAEHMFPKSQE
Protein: Cysteine synthase, chloroplastic/chromoplastic (EC 2.5.1.47) (At.OAS.7-4) (Beta-substituted Ala synthase 2;1) (ARAth-Bsas2;1) (CSase B) (AtCS-B) (CS-B) (O-acetylserine (thiol)-lyase) (O-acetylserine sulfhydrylase) (OAS-TL B) (cpACS1) (P47999)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Acts as a major cysteine synthase.
Subcellular location: Plastid, chloroplast stroma. Plastid, chromoplast.
Interaction partners:
- Assimilatory sulfite reductase
- Probable cystathionine gamma-synthase 2
- Cystathionine gamma-synthase 1, chloroplastic
- Serine acetyltransferase 1, chloroplastic
- Serine acetyltransferase 3, mitochondrial
- Cystathionine beta-lyase, chloroplastic
- L-cysteine desulfhydrase
- Probable L-cysteine desulfhydrase, chloroplastic
- Methionine gamma-lyase
- Phosphoserine aminotransferase 1, chloroplastic
Sequence:
MAATSSSAFLLNPLTSRHRPFKYSPELSSLSLSSRKAAAFDVSSAAFTLKRQSRSDVVCKAVSIKPEAGVEGLNIADNAAQLIGKTPMVYLNNVVKGCVASVAAKLEIMEPCCSVKDRIGYSMITDAEEKGLITPGKSVLVESTSGNTGIGLAFIAASKGYKLILTMPASMSLERRVLLRAFGAELVLTEPAKGMTGAIQKAEEILKKTPNSYMLQQFDNPANPKIHYETTGPEIWEDTRGKIDILVAGIGTGGTITGVGRFIKERKPELKVIGVEPTESAILSGGKPGPHKIQGIGAGFVPKNLDLAIVDEYIAISSEEAIETSKQLALQEGLLVGISSGAAAAAAIQVAKRPENAGKLIAVVFPSFGERYLSTQLFQSIREECEQMQPEL
Protein: cDNA FLJ57114, highly similar to Niemann-Pick C1 protein (B4DIP7)
Organism: Homo sapiens (Human)
Subcellular location: Endomembrane system {ECO:0000256|ARBA:ARBA00004127}; Multi-pass membrane protein {ECO:0000256|ARBA:ARBA00004127}.
Interaction partners:
Sequence:
MYNACRDVEAPSSNDKALGLLCGKDADACNATNWIEYMFNKDNGQAPFTITPVFSDFPVRGMEPMNNATKGCDESVDEVTAPCSCQDCSIVCGPKPQPPPPPAPWTILGLDAMYVIMWITYMAFLLVFFGAFFAVWCYRKRYFVSEYTPIDSNIAFSVNASDKGEASCCDPVSAAFEGCLRRLFTRWGSFCVRNPGCVIFFSLVFITACSSGLVFVRVTTNPVDLWSAPSSQARLEKEYFDQHFGPFFRTEQPIIRAPLTDKHIYQPYPSGADVPFGPPLDIQILHQVLDLQIAIENITASYDNETVTLQDICLAPLSPYNTNCTILSVLNYFQNSHSVLDHKKGDDFFVYADYHTHFLYCVRAPASLNDTSLLHDPCLGTFGGPVFPWLVLGGYDDQNYNNATALVITFPVNNYYNDTEKLQRAQAWEKEFINFVKNYKNPNLTISFTAERSIEDELNRESDSDVFTVVISYAIMFLYISLALGHIKSCRRLLVDSKVSLGIAGILIVLSSVACSLGVFSYIGLPLTLIVIEVIPFLVLAVGVDNIFILVQAYQRDERLQGETLDQQLGRVLGEVAPSMFLSSFSETVAFFLGALSVMPAVHTFSLFAGLAVFIDFLLQITCFVSLLGLDIKRQEKNRLDIFCCVRGAEDGTSVQASESCLFRFFKNSYSPLLLKDWMRPIVIAIFVGVLSFSIAVLNKVDVGLDQSLSMPDDSYMVDYFKSISQYLHAGPPVYFVLEEGHDYTSSKGQNMVCGGMGCNNDSLVQQIFNAAQLDN
Protein: Forkhead box N1 (Forkhead box protein N1 isoform X1) (F1R9K2)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Subcellular location: Nucleus {ECO:0000256|PROSITE-ProRule:PRU00089}.
Interaction partners:
- GCMb)
- V
- Nuclear distribution protein nudE-like 1-A
- IKAROS family zinc finger 1
Sequence:
MSSEPQGLSFLSISSSSSSPSPSAGQLQSFDSLESPCFQMPESQCHQSNGGEGFVPYSQRKSDPYSQKSAERFRRHSVDGSPVGRDCDLTENSHYHPYRRQCSEGAISEGQPFSCVRRAGLAREIASADGLEEQSSWTTLGTDVETTSIMGTRRPYSEPQESSEEPPGYTTVNHQAYSAISPLQHQYYPSRGIDTVSHYYNQSLSTQTSQDSSPQPLYPKPVYSYSILIFLALRNSKTGSLPVSEIYSFMTEHFPYFKTAPDGWKNSVRHNLSLNKCFEKVENKNGNSSRKGCLWALNPAKVEKMQEELHKWRRKDPLTVRRSMARPEELERLLGERPEKLKSHFSLPSSHTHSQPFRVNMHPAYGHQPVHENRILNQKALYNPLTSQNAVLPPPYISPDPLAFQYYSPATHQPSVGHPSSPRTGSLDSPLPAHTPPSYSTALQAGHSGTASMQELLLDGEINNDVDALNPSLTDLQLHGSLWEELRNDSLAPDSLIVMDSASSLAQLSPPPARDSAGVCAETEDGVQGSISELYLSSFYTTAFTSAENMPGLISSSANTAIPLL
Protein: Probable C4-dicarboxylate-transport transmembrane protein DctA (P71906)
Organism: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Subcellular location: Membrane {ECO:0000256|ARBA:ARBA00004141}; Multi-pass membrane protein {ECO:0000256|ARBA:ARBA00004141}.
Interaction partners:
- Probable succinate dehydrogenase SdhD
- Succinate dehydrogenase 2 membrane subunit SdhC
- Fumarate reductase iron-sulfur subunit
Sequence:
MTAPLDRAPVTDLPANNKGRDRTHWLYLAVIFAVIAGVIVGLTAPSTGKSLTVLGTVFVNLIKMMIAPVIFCTIVLGIGSVRKAAAVGKVGGLALAYFLTMSSVALGIGLIVGNLLSPGRDLHLRPGAVGSGAALAGQAAESHGIAGFIQQIIPRSLPSALTEGNVLQVLLVALLVGFAVQGLGPAGESILRAVENLQKLVFKVLVMVLWLAPIGAFGAIANIVATTGFNAVTNLLLLMAGFYLTCVVFVFGVLGVLLRIVSGLSIFRLLRYLAREYLLIFATSSSEVVLPRLITKMKHLGVQSSTVGVVVPTGYSFNLDGTAIYLTMASLFIADAMGHRLTWGEQIALLAFMIIASKGAAGVSGAGLATLAGGLQAHRPELLDGVGLIVGIDRFMSEARSLTNFSGNAVATILVASWTKTIDLSKADEVLRGRDPFDESTMVDPHDEEPPAATPHGGGVPTNPALCDFEQVSLGGLVGRPAGPQRADVDG
Protein: DNA-binding protein SMUBP-2 (EC 3.6.4.12) (EC 3.6.4.13) (ATP-dependent helicase IGHMBP2) (Cardiac transcription factor 1) (CATF1) (Immunoglobulin mu-binding protein 2) (P40694)
Organism: Mus musculus (Mouse)
Function: 5' to 3' helicase that unwinds RNA and DNA duplexes in an ATP-dependent reaction. Specific to 5'-phosphorylated single-stranded guanine-rich sequences. May play a role in RNA metabolism, ribosome biogenesis or initiation of translation. May play a role in regulation of transcription (By similarity). Interacts with tRNA-Tyr.
Subcellular location: Nucleus {ECO:0000250|UniProtKB:P38935}. Cytoplasm {ECO:0000269|PubMed:19158098}. Cell projection, axon {ECO:0000269|PubMed:19158098}.
Interaction partners:
- GTPase HRas
- GTP-binding protein REM 1
- GTPase KRas
- Phosphatidylinositol 3-kinase regulatory subunit alpha
- Phosphatidylinositol 3-kinase regulatory subunit beta
- Phosphoinositide 3-kinase regulatory subunit 5
- Speckle targeted PIP5K1A-regulated poly
Sequence:
MASSTVESFVAQQLQLLELERDAEVEERRSWQEHSSLRELQSRGVCLLKLQVSSQRTGLYGQRLVTFEPRKFGPAVVLPSNSFTSGDIVGLYDTNENSQLATGVLTRITQKSVTVAFDESHDLQLNLDRENTYRLLKLANDVTYKRLKKALMTLKKYHSGPASSLIDILLGSSTPSPAMEIPPLSFYNTTLDLSQKEAVSFALAQKELAIIHGPPGTGKTTTVVEIILQAVKQGLKVLCCAPSNIAVDNLVERLALCKKRILRLGHPARLLESVQHHSLDAVLARSDNAQIVADIRRDIDQVFGKNKKTQDKREKGNFRSEIKLLRKELKEREEAAIVQSLTAADVVLATNTGASSDGPLKLLPEDYFDVVVVDECAQALEASCWIPLLKAPKCILAGDHRQLPPTTVSHRAALAGLSRSLMERLAEKHGAGVVRMLTVQYRMHQAIMCWASEAMYHGQFTSHPSVAGHLLKDLPGVTDTEETRVPLLLIDTAGCGLLELEEEDSQSKGNPGEVRLVTLHIQALVDAGVQAGDIAVIAPYNLQVDLLRQSLSNKHPELEIKSVDGFQGREKEAVLLTFVRSNRKGEVGFLAEDRRINVAVTRARRHVAVICDSHTVNNHAFLETLVDYFTEHGEVRTAFEYLDDIVPENYTHEGSQGHSRVPKPKCPSTSIRKPASDQESGQETRAAPRHGRRKPSEKPPGSHVQSQHSSSANGSDRTGGPDRTEHFRATIEEFVASKESQLEFPTSLSSHDRLRVHQLAEEFGLRHDSTGEGKARHITVSRRSPASSGSVAPQPSSPPSPAQAEPEPRAEEPVTVVQAHCPVQLDLKALHLERLQRQQSSQAQTAKGQPGGDSRPQKASQKKKKKEPKGPVMALPCEEDFDALVSAVVKADNTCSFSKCSVSTTTLGQFCMHCSHRYYLSHHLPEIHGCGEKARAHARQRISREGVLYAGSGTKDRALDPAKRAQLQRRLDKKLGELSSQRTSRKKEKERGT
Protein: Putative ribosomal RNA-processing protein 12 (Q9C0X8)
Organism: Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Function: Required for nuclear export of the ribosomal subunits. Required for maturation of the RNA components of pre-ribosomes (By similarity).
Subcellular location: Nucleus {ECO:0000269|PubMed:16823372}. Cytoplasm, cytoskeleton, microtubule organizing center, spindle pole body {ECO:0000269|PubMed:16823372}.
Interaction partners:
- mRNA export factor elf1
- Uncharacterized protein C13G1.09
- Ribosome biogenesis protein tsr1
- Probable nucleolar complex protein 14
- Periodic tryptophan protein 2 homolog
- Protein LTV1
- Uncharacterized protein C1604.06c
- Ribosome biogenesis protein bms1
- Nucleolar protein 58
- Probable nucleolar GTP-binding protein 1
Sequence:
MAEVNEPLQIELRKIRNSSTAGVINEFDVIVSAVEGTLKEQKTEATPTAYLVALLTLVKEFTDLKKNFKGHTFQLLELVIKYVPSNVLQAKFPQILSVLAPVVNNAETNKTVLLPYLNVLEKLLLLQDYSSWTHGNSCKTSIYILLFFALSNTEKTRVRSLQILANILKNPPAGPVTEHPAIKYTAFEPLRLLESLATAKKPKTPAEVQKLNNSLVLIRVLCSSTHWPMTLVERLCRSCVLIVGQRSTNSILLVYQILDGLSKKSVDYTDAVSLRMTLICLQKLEPSEHDPILMVGWLKAMNTAIRAFNILDKETAKYECLHRFKAFFTLLESESMEIRLQTATTICSVIGCLDTTPNSFAVVEEICSFICDALRDIRFRLAYPECFQIISSLCDKLGPHSDPYLIPALEVIDYLRGSEGFDGKALVDEAIGSFVRAIGPEAMLRVLPLNLELNDKDAVGRAWLLPVLRDNIRFANLAHFTNYFVPLSGQLYQKVIEMNDLDSIPSKLLQTLVDQIWSLLPGYCYLPLDLQSSFTLEFASILVNVLYEQVSLRSVICNSLTALVETNSKVADKLPLDDVISVPVSASDASSNLAFLTNMSSNFLSVLLNVFSSTPSQYRYPILKCIQTWIFISSNDTIHSVYKKVTDLLPDSLNDLAGSFNIAADGISSPMAYSLIDLLIVISPYLNQDYAVTLFEYVHEFLRHVNPAIQKKGYKLLGTLLRVDYGKAYATQHVKEIFEELSSVADRVVSSTRKDRLASLNALYELQSSELVIAIPQLLPEAIISLKEVNEKARHTAFQLLFNIAKSAVNSVEFGNSKPERVEKFVSVISAGLAGSSTHMISATIIAISSIVMEYKVFISEPFLVQLISTLNLFITSSKREIAKAAIDFIKISVSSFPVECIKPLLPELIPNLLAWSHEGKANLRVKVRHLFEKMGRKYGIAEIEPFFPAEDKKLITNIRKTQERNIRKRAMKRDPAKPSSAQPRKTFASAYEAAVYDTDDEAEEEFENDEMNNGNGGDLRMDEAFVQEDNDEEPLDLLDIEAVSKISSTDPRKKLAARKQKLNSAFKSNEEGRLLINDSDEDELIEDSLANAQQHAEVNRTYLEAVAGKESFRRGLNNRVKFSNKRVRDDYDEEMEEVEVPEVTRKPAKQKFDRKQRGQKGY
Protein: Beta-1,6-galactosyltransferase GALT31A (EC 2.4.1.-) (Beta-1,3-galactosyltransferase 6) (GT31 family galactosyltransferase 1) (AtGALT31A) (Q9MAP8)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Beta-galactosyltransferase involved in elongation of beta-1,6-linked galactan side chains on arabinogalactan proteins. Required for the progression of embryogenesis beyond the globular stage. Beta-galactosyltransferase involved in the biosynthesis of type II arabinogalactan. Transfers galactose from UDP-galactose to a mixture of various oligosaccharides derived from arabinogalactan proteins. Forms a complex with GALT29A that can work cooperatively to enhance the activities of adding galactose residues at O6 positions to beta-1,6-linked galactan and beta-1,3-linked galactan.
Subcellular location: Golgi apparatus membrane {ECO:0000269|PubMed:23837821, ECO:0000269|PubMed:24693939}; Single-pass type II membrane protein {ECO:0000305}.
Interaction partners:
- Beta-1,6-galactosyltransferase GALT29A
- Hydroxyproline O-galactosyltransferase GALT2
- Beta-glucuronosyltransferase GlcAT14A
- Hydroxyproline O-galactosyltransferase GALT6
- Fucosyltransferase 6
- Probable fucosyltransferase 4
- Beta-arabinofuranosyltransferase RAY1
- Beta-1,3-galactosyltransferase GALT1
- Probable xyloglucan galactosyltransferase GT14
- Beta-glucuronosyltransferase GlcAT14C
Sequence:
MGMGRYQKSATSGVSARWVFVLCISSFLLGVLVVNRLLASFETVDGIERASPEQNDQSRSLNPLVDCESKEGDILSRVSHTHDVIKTLDKTISSLEVELATARAARSDGRDGSPAVAKTVADQSKIRPRMFFVMGIMTAFSSRKRRDSIRGTWLPKGDELKRLETEKGIIMRFVIGHSSSPGGVLDHTIEAEEEQHKDFFRLNHIEGYHELSSKTQIYFSSAVAKWDADFYIKVDDDVHVNLGMLGSTLARHRSKPRVYIGCMKSGPVLAQKGVKYHEPEYWKFGEEGNKYFRHATGQIYAISKDLATYISVNRQLLHKYANEDVSLGSWFIGLDVEHIDDRSLCCGTPLDCEWKGQAGNPCAASFDWSCSGICKSVDRMLEVHQRCGEGDGAIWHSSF
Protein: Uncharacterized protein (Q2YLL0)
Organism: Brucella abortus (strain 2308)
Interaction partners:
Sequence:
MTDLIHIHEDDWGMRNLFPLAAFSEVKEDIAKSATAAAKHQDASGFGYTDVYLIEPPSISYADVGLLVSDAEGVLLPILPRVQQFRATSFQGMTSGKQDSYGTYQDDTSCFGLGRHCYLKLDKKGPLVEGIWFGLDTDDVDAIGRLRMAIEAIDALVPSVIADYFLDISGPVGADGVLDSYFEAFQLQHLKAKQAVQEFQAKYRRQENMLDKLRKLVAFLGRFR
Protein: Uncharacterized protein YnzH (O31802)
Organism: Bacillus subtilis (strain 168)
Interaction partners:
- Spore coat protein C
- Spore coat protein G
- Spore coat protein E
- Spore coat protein B
- Uncharacterized FAD-linked oxidoreductase YvdP
- Spore coat protein S
- Inner spore coat protein H
- Spore coat protein Z
- Spore coat protein I
- Spore coat protein X
Sequence:
MGYYKKYKEEYYTWKKTYYKKYYDNDKKHYDCDKYYDHDKKHYDYDKKYDDHDKKYYDDHDYHYEKKYYDDDDHYYDFVESYKKHH