wanglab/gogpt-training-data huggingface dataset:
Protein: Signal recognition particle receptor subunit beta (SR-beta) (P47758)
Organism: Mus musculus (Mouse)
Function: Component of the SRP (signal recognition particle) receptor. Ensures, in conjunction with the signal recognition particle, the correct targeting of the nascent secretory proteins to the endoplasmic reticulum membrane system. May mediate the membrane association of SR.
Subcellular location: Endoplasmic reticulum membrane {ECO:0000250|UniProtKB:O13950}; Single-pass membrane protein {ECO:0000255}.
Interaction partners:
- Signal recognition particle receptor subunit alpha
- Signal recognition particle subunit SRP72
- Signal recognition particle subunit SRP68
- Signal recognition particle subunit SRP54
- Signal recognition particle 19 kDa protein
- Signal recognition particle 14 kDa protein
- Signal recognition particle 9 kDa protein
- Inhibitor of carbonic anhydrase
- Signal recognition particle 54 kDa protein
- Serine/threonine-protein kinase ATR
Sequence:
MASANTRRVGDGAGGAFQPYLDSLRQELQQRDPTLLSVAVALLAVLLTLVFWKFIWSRKSSQRAVLFVGLCDSGKTLLFVRLLTGQYRDTQTSITDSSAIYKVNNNRGNSLTLIDLPGHESLRFQLLDRFKSSARAVVFVVDSAAFQREVKDVAEFLYQVLIDSMALKNSPSLLIACNKQDIAMAKSAKLIQQQLEKELNTLRVTRSAAPSTLDSSSTAPAQLGKKGKEFEFSQLPLKVEFLECSAKGGRGDTGSADIQDLEKWLAKIA
Protein: Kinesin-like protein klp-3 (P45962)
Organism: Caenorhabditis elegans
Subcellular location: Cytoplasm, cytoskeleton {ECO:0000305}.
Interaction partners:
- Kinesin-like protein
- Kinesin motor domain-containing protein
Sequence:
MDSHVGEVDIFQQCKYIHEVELVNMKLQMRILETHIETKDRLLRNLEDIIDEQESRIANMEDFIQGRATSYTNRSNMLKGISVLSLDFGNLSEENLRLKNALSQMQKVARVNELLETDEDYESDMTSNEDRFALSRDSSCSVPRSVSPQPTGDVIKPYPQMVQSMREEGHWKKLQRCAEELKTEKDELKRLALDTKDAFNVCMAEMRMMLTSKTTDFFRVLIERYKAEMEKRKQLHNQLVELNGNIRVFYRIRPQLASETDNQKPVVVIDEMDNGVVHVSNTTGTRKTSAGADKVIPTDFSQDQIFNEVSPIITSCIDGYNVCIFAYGHTGSGKTYTMDGPVTMPGINQRAIMQLFETAKERTGDIKYDIKVAMMEIYNEKIRDLLNTSNTNLAIRQTEEGRSSIPGLEEVSVNSAEEVTETLARGRKNKAVAATEANIESSRSHVIVRVLVSATNLITKATTVGRLNLVDLAGSERVSQTNATGQLLKEAQAINKSLSELGNVVLALRQNQKHIPFRNCQLTRILEDSLNGDSKTLVIVHLSPDAKSLNESISSVNFAEKIGQVFTKSGTMKREPTRRSMTGISSGQRREIPASPRK
Protein: DNA damage-binding protein 2 (UV-damaged DNA-binding protein 2) (OsUV-DDB2) (WD40 repeat-containing protein 2) (OsWD40-2) (Q84KJ3)
Organism: Oryza sativa subsp. japonica (Rice)
Function: Required for DNA repair. Binds to DDB1 to form the UV-damaged DNA-binding protein complex (the UV-DDB complex). The UV-DDB complex may recognize UV-induced DNA damage and recruit proteins of the nucleotide excision repair pathway (the NER pathway) to initiate DNA repair (Probable). May function as the substrate recognition module for a DCX (DDB1-CUL4-X-box) E3 ubiquitin-protein ligase complex (By similarity).
Subcellular location: Nucleus {ECO:0000250|UniProtKB:Q6NQ88}.
Interaction partners:
- Os01g0104600 protein
- DNA damage-binding protein 1
- Os01g0585400 protein
- Os08g0427500 protein
- Os02g0307200 protein
- Os01g0857900 protein
- E3 ubiquitin-protein ligase
- Os03g0786800 protein
- Os01g0580300 protein
- COP9 signalosome complex subunit 5
Sequence:
MGPTTRARFVHNRRRRRRRGPYAAPDDDDEEEDQQEASSSSSSSDEGEEDAEEEGSGEVDDDDGEAAEPSGKEEEVSPVAAAARSGRKASITISLKKVCKVCKSTGHEAGFKGAVYIDCPRKPCFLCKMPGGHTTLTCPHRVAMEHGVIPASRRNTNTSLDYVFQSQVKGKIPMVKPQFLIPNQLECGNIKFHQRRVTCLEFHPTKNNVLLSGDKKGLLGVWDYVKLHEKITYDSVHSCILNSMKFDTTNDGLLYTASSDGTISSTDLDTGIGSSLLNLNPNGWNGPSTWRMIYGMDFNSDKGLLLVADSFGFLHLLDRRLKARIGDPILIHKKGSKVTSLHCNPAQPEVLLSSGNDHYARIWDTRKLEPNSAFVSLAHGRVVNSGYFSPQSGNKILTTCQDNRIRVWDYIFGNLESPSREIVHSHDFNRHLTPFKAEWDPKDHTETVAVIGRYISENYNGIALHPIDFIDTSTGKLLAEVMDPDITTISPVNKLHPRDDILASGSSRSIFIWKPKTESDATEERNREKAKEFVYGSGSRKKSNGKHENSSDDDSDGSCDGKKKKKAKKTRFTHTIKGKGKSKV
Protein: Possible lipoprotein LpqQ (O53846)
Organism: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Interaction partners:
- Putative lipoprotein LprH
- Probable conserved lipoprotein LpqU
- Probable conserved membrane protein
- Fluoride-specific ion channel FluC 1
- Probable conserved transmembrane protein
- Conserved protein
- Probable lipoprotein LpqA
- Uncharacterized protein Rv0963c
- Uncharacterized protein Rv3630
Sequence:
MCCSTAAKSAVIVCCAAIATTACSFQATSTQPSTAPPTSRVDSLIVSIEDVRRIANYEELAAHFQTDLREPPEADTNVPGPCRVVGSSDRTFGTDWSEFRSAGYHGVTDDLRPGGPVMVETVSQAIALYPDPSTARGVFHRLESSLAECAGLHDPYFDFILDRPDASTVRIGAAGWSHVYRLKSSVFISVGVLGIEPAEPIANVILQTISDRIQ
Protein: ribonuclease III (EC 3.1.26.3) (Q960Y4)
Organism: Drosophila melanogaster (Fruit fly)
Interaction partners:
Sequence:
MNALSEADAPVESWVRSSPAELYYERTKSENEVRGRARLQKLCTLFDEELLQRAKRVREKLPVYVPPPRKARRRVCKHKHKSEACSSSSSSDDDSDEDAFKIEQDCCMEELSRKVQHPQRVHADLWHNDAGEMNDGPLCRCSAKSRRIGIRHGIYPGETGYKLCDPNSNNAGKLFHYRISISPPTNFLTKTPTIIKHDEHEFLFEGFSLLSHVRLSDLPVCKVIRFNIEYTIEYEEEKMPENFTIHELDIFFKYLFHELLELVDFNLMPNLPSGNVEESCPAFHFFPRFVRDLPDNGKEVLAMVEVLRYLLDNSAQLVERQQLLHLNQISQSEWQNYVDFIKGMLVTKPGYKPCSLRVDQLDRNNSDLPECVDRETGISHPAIVHFGICHPQLSYAGNPEYQKAWREYVKYRHLMANMSKPSFKDKRKLEEKEQRLQEMRTQGRMKRNITVAISSEGFYRTGIMCDVVQHAMLIPVLTGHLRFHKSLDLLEESIGYRFKNRYLLQLALTHPSYKENYGTNPDHARNSLTNCGIRQPEYGDRKIHYMNTRKRGINTLVSIMSRFGKEHETVSNITHNERLEFLGDAVVEFLSSIHLFFMFPELEEGGLATYRAAIVQNQHLALLAKKLQLEEFMLYAHGSDLCHELELRHAMANCFEALMGALLLDGGIKVADEVFTDALFRQDEKLLSIWKNLPEHPLQEQEPLGDRSCIDSYRVLKELTKFEDSIGIKFKHIRLLARAFTDRSIGFTHLTLGSNQRLEFLGDTVLQLICSEYLYRHFPEHHEGHLSLLRSSLVNNRTQAVVCDDLGMPKYAVYANPKADLKTKDRADLLEAFLGALYVDKGLLYCEQFCHVCLFPRLQLFIMNQDWNDPKSKLQQCCLTLRTMDGGEPDIPYYKVVEASGPTNTRVYKVAVYFRSKRLATSSGSSIQQAEMNAAKQALENSRDLFPQLDHQKRVIAKSIKKQTGNELDNDSDRQHQEEKIKRPKYATPLQDESHLPKQYRMHENISSDELPEDEDFESTAPKSPTMPLRSNRSGSSSSSSSSDSDGSTSSPKCKRRLKKCSSVSSKSSLG
Protein: Lipase (Q9VG47)
Organism: Drosophila melanogaster (Fruit fly)
Interaction partners:
- IP13478p
- IP12247p
Sequence:
MQSFLIQMLPILLGIFFVWLSNSTALSEVNWKNHSLHRIHHRTKVITAVDIISSHNYPVQTHTVVTRDGYILSVFRIPSSQLCASSEPKPVVLINHGMTGSADSWLLTGPRNGLPFLLADACYDVWLINCRGTRYSRKHLKLKAWLLQFWRFSWHEIGMEDLPATVDHILASTKRNSLHYVGHSQGCTSMLVMLSMRPEYNKRIRTTILLAPPVFLKHSLSMGHKIMKPLFNLLPDIELLPHHKMLNSAVSAICKILGVKDVCTALYLLTNGRVSQHMNRTLIPMLIATHPAGISSRQPRHFFQLKDSGRFRQYDFGFGMNYLIYRQNTPPEYPLEMVRPHSAIHIFYSDDDGTISPRDVLTLASKLPYAVPHHITDETWNHMDFLLANNINELINNPVIKIIKTFEENIKHKIGNIKGEISIDALLNEF
Protein: Inner membrane transport protein YqeG (P63340)
Organism: Escherichia coli (strain K12)
Subcellular location: Cell inner membrane; Multi-pass membrane protein.
Interaction partners:
Sequence:
MSNIWSKEETLWSFALYGTAVGAGTLFLPIQLGSAGAVVLFITALVAWPLTYWPHKALCQFILSSKTSAGEGITGAVTHYYGKKIGNLITTLYFIAFFVVVLIYAVAITNSLTEQLAKHMVIDLRIRMLVSLGVVLILNLIFLMGRHATIRVMGFLVFPLIAYFLFLSIYLVGSWQPDLLTTQVEFNQNTLHQIWISIPVMVFAFSHTPIISTFAIDRREKYGEHAMDKCKKIMKVAYLIICISVLFFVFSCLLSIPPSYIEAAKEEGVTILSALSMLPNAPAWLSISGIIVAVVAMSKSFLGTYFGVIEGATEVVKTTLQQVGVKKSRAFNRALSIMLVSLITFIVCCINPNAISMIYAISGPLIAMILFIMPTLSTYLIPALKPWRSIGNLITLIVGILCVSVMFFS
Protein: Low calcium response E (Type III secreted protein SctW) (Type III secretion regulator YopN/LcrE/InvE/MxiC) (Q9Z8L4)
Organism: Chlamydia pneumoniae (Chlamydophila pneumoniae)
Interaction partners:
- Scc1
- Low Calcium Response Protein H
- Low calcium response D
- Type III secretion inner membrane protein SctU
- 4-alpha-glucanotransferase
- Type 3 secretion system ATPase
Sequence:
MAASGGTGGLGGTQGVNLAAVEAAAAKADAAEVVASQEGSEMNMIQQSQDLTNPAAATRTKKKEEKFQTLESRKKGEAGKAEKKSESTEEKPDTDLADKYASGNSEISGQELRGLRDAIGDDASPEDILALVQEKIKDPALQSTALDYLVQTTPPSQGKLKEALIQARNTHTEQFGRTAIGAKNILFASQEYADQLNVSPSGLRSLYLEVTGDTHTCDQLLSMLQDRYTYQDMAIVSSFLMKGMATELKRQGPYVPSAQLQVLMTETRNLQAVLTSYDYFESRVPILLDSLKAEGIQTPSDLNFVKVAESYHKIINDKFPTASKVEREVRNLIGDDVDSVTGVLNLFFSALRQTSSRLFSSADKRQQLGAMIANALDAVNINNEDYPKASDFPKPYPWS
Protein: SEC6 (F4IA34)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Interaction partners:
Sequence:
MMVEDLGVEAKEAAVREVAKLLPLPELLQSISSIKADYIARQQANDAQLSTMVAEQVEQAQAGLESLSSSEKTIYELRDNFISIDKLCQECQTLIDNHDQIKLLSNARNNLNKTLKDVEGMMSISVEAAAARDSLSDDKEIVNTYERLTALDGKRRFALAAAGEEVGRLREYFEDVDRTWETFEKTLWGHVSNYYKLSKERYQILHILLVYLKLTDVSLFCSPQTLVRALRYDPPPETFFTFVYGIYSQIITFQVVEMQEILDQQLAEEAAEAEGEGAMASVANPRRPGKKSTTTSASSKGLAQQKLKVQGKGYKDKCYEQIRKAVEDRFNRLLTLVFEDLKAALEEARMIGEELGDIYDYVAPCFPPRYEIFQLMVNLYTERFIQMLRLLSDRANDLTNIEILKVTGWVVEYQENLIALGVDDSLAQVCSESGSMDPLMNAYVERMQATTKKWYMNILEADKVQPPKKTEEGKLYTPAAVDLFRILGEQVMIDFQAAEKKRVDEPASDIGLEPLCAMINNNLRCYDLAMELSNSTLEALPQNYAEQVNFEDTCKGFLEVAKEAVHQTVRVIFEDPGVQELLVKLYQKEWCEGQVTEYLVATFGDYFTDVKMYVEERSFRRFVEACLEETVVVYVDHLLTQKNYIKEETIERMRLDEEVLMDFFREYISASKVESRIRIMSDLRELASAESLDAFTLVYSNILEHQPDCPAEVVEKLVSLREGIPRKDTKEVVQECKEIYENTLVDGNPPKTGFVFPRVKCLTASKGSMWRKLT
Protein: Pregnancy-specific protein (Q15402)
Organism: Homo sapiens (Human)
Interaction partners:
Sequence:
ETPKPSISSSKLNPREAMEAVSLTCDPETPDASYLWWMNGQSLPMSHRLQLSETNRTLFLLGVTKYTAGPYECEIRNPVSASRSDPFTLNLLHGPDLPRIYPSFTYYRSGEVLYLSCSADSNPPAQYSWTINGKFQLPGQKLFIPQITTKHSGLYACSVRNSATGKESSKSMTVKVSDWTLP
Protein: Cleavage and polyadenylation factor complex subunit C74.02c (O74535)
Organism: Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Function: RNA-binding component of the cleavage and polyadenylation factor (CPF) complex, which plays a key role in polyadenylation-dependent pre-mRNA 3'-end formation. Involved in poly(A) site recognition. May be involved in coupling transcription termination and mRNA 3'-end formation.
Subcellular location: Cytoplasm {ECO:0000269|PubMed:16823372}. Nucleus {ECO:0000269|PubMed:16823372}.
Interaction partners:
- mRNA 3'-end-processing protein yth1
- RNA polymerase II subunit A C-terminal domain phosphatase ssu72
- Serine/threonine-protein phosphatase PP1-1
- Protein cft1
- Cleavage and termination factor 1
- Uncharacterized WD repeat-containing protein C824.04
- Polyadenylation factor subunit 2
- Pre-mRNA polyadenylation factor fip1
- mRNA cleavage and polyadenylation specificity factor complex subunit pta1
- Cleavage factor two protein 2
Sequence:
MDNWNSVRNVSSDRQTSKTSENPPHTSNEYSGKPEFINLSPDLEENLDEKLMSAFPGLEPHVFQHSQSPLSHKDASLLATMPSVASSNPSLISSGSSQTGSPSQSLSSNKEPSSPGISPSNDSQSQNTNHTSISANPYVNNPSHTSRNPDSGSSLNTASHEVPSSKSDVNVQMLARLKSKSRQKISSSDPLEDLRLTLTECLNPINIVQAPKECAAILVNLMSNITQDDQKLVFLDLLKSKVGNSIYSQLVDGGRKLFLPKLRNWFVSAIRSKHDELIHLILLVLANLPLTTEKLAEVKFGKPILIVKKKSTNSVIRQLAENLSELAEKSFTIEQNRENEKSSTKNDSTVSSSAVVMAPAGPAMAPSASNKPSASSTTKSSNSKSKKKVTSISGTSFFKNLASSTKPTSASSSTKAPLTKQQTNPSTPLSSIMAGLKGREKEKDKDSGISSENVSNNREELPSFRKRSSSSRQSEEIASLQAENAVFSSDPASNDEKTGNKKRKKKSVSWKPDNDLVQVKFIESLNEEGAASVKTPHIYGNARDMDRQEARVAFGSHVEDDVENEIIWYKPVPIKFEISKDEIHPRGYKCGGNERNLTPEATSEIEREKNESKDISTFNIILDLPVIREFDDSRPPAHIKLVSSDTQATTELGFNGLVQQVSENNTNAYSATSNSQLSSIFSNLSSSISDASSNVLQNPSLSIPNYSNAI
Protein: L-asparagine permease 1 (L-asparagine transport protein 1) (P9WQM9)
Organism: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Subcellular location: Cell membrane {ECO:0000250}; Multi-pass membrane protein {ECO:0000250}.
Interaction partners:
- L-asparaginase
- Conserved transmembrane protein
Sequence:
MSAASQRVGAFGEEAGYHKGLKPRQLQMIGIGGAIGTGLFLGAGGRLAKAGPGLFLVYGVCGVFVFLILRALGELVLHRPSSGSFVSYAREFFGEKAAYAVGWMYFLHWAMTSIVDTTAIATYLQRWTIFTVVPQWILALIALTVVLSMNLISVEWFGELEFWAALIKVLALMAFLVVGTVFLAGRYPVDGHSTGLSLWNNHGGLFPTSWLPLLIVTSGVVFAYSAVELVGTAAGETAEPEKIMPRAINSVVARIAIFYVGSVALLALLLPYTAYKAGESPFVTFFSKIGFHGAGDLMNIVVLTAALSSLNAGLYSTGRVMHSIAMSGSAPRFTARMSKSGVPYGGIVLTAVITLFGVALNAFKPGEAFEIVLNMSALGIIAGWATIVLCQLRLHKLANAGIMQRPRFRMPFSPYSGYLTLLFLLVVLVTMASDKPIGTWTVATLIIVIPALTAGWYLVRKRVMAVARERLGHTGPFPAVANPPVRSRD
Protein: Serine/threonine-protein kinase-like protein CCR1 (EC 2.7.11.1) (Protein CRINKLY 4 RELATED 1) (AtCRR1) (Q9S7D9)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Serine/threonine-protein kinase with low activity.
Subcellular location: Membrane {ECO:0000305}; Single-pass type I membrane protein {ECO:0000305}.
Interaction partners:
- ESCRT-related protein CHMP1A
- ESCRT-related protein CHMP1B
Sequence:
METRCSLLFLSLILLYLPKPGSGFGSSGPIAASFGGSAFFCAIDASGRQDVICWGKNYSSPSSPSSSSSSSSIASSTSASYNIPSMAVLSGGDGFLCGILSNTSQAFCFSSLGSSSGMDLVPLAYRTTAYSQIAAGNSHVCAVRGAYYSDHDSGTIDCWEITRATNNNSLIAKENPNFYDQIVSNLVFNNIVSGDGFSCGGIRDGGMLCFGPNSSNLGFNTTSDNFQVLAAGKNSVCAILNLSREVKCWGEDESFVNSPMNDSRFVSLTAGPRHFCGIREDNHEVECWGNSNFSLIPKGSGFKAIASSDFIVCGIREEDLVLDCWMVNGSSTLAYDPPLELCSPGMCRAGPCNEKEFAFNASILNEPDLTSLCVRKELMVCSPCGSDCSHGFFLSSSCTANSDRICTPCSLCQNSSCSDICKLHNSNFPDKHWHQLQRLVLIIGSCASALLIIIIGCCVVPRIVTSPNKEDGAANQFKSCIGKPDLDTDQPLENVSPAPSVTPFAQVFRLSELKDATNGFKEFNELGRGSYGFVYKAVLADGRQVAVKRANAATIIHTNTREFETELEILCNIRHCNIVNLLGYSTEMGERLLVYEYMPHGTLHDHLHSGFSPLSWSLRIKIAMQTAKGLEYLHNEAEPRIIHGDVKSSNVLLDSEWVARVADFGLVTSSNEKNLDIKRDVYDFGVVLLEILTGRKRYDRDCDPPEIVEWTVPVIREGKAAAIVDTYIALPRNVEPLLKLADVAELCVREDPNQQPTMSELANWLEHVARDALIF
Protein: Ig protease IdeS domain-containing protein (Q7DAM2)
Organism: Streptococcus pyogenes serotype M1
Interaction partners:
Sequence:
MRKRCYSTSAAVLAAVTLFVLSVDRGVIADSFSANQEIRYSEVTPYHVTSVWTKGVTPPANFTQGEDVFHAPYVANQGWYDITKTFNGKDDLLCGAATAGNMLHWWFDQNKDQIKRYLEEHPEKQKINFNGEQMFDVKEAIDTKNHQLDSKLFEYFKEKAFPYLSTKHLGVFPDHVIDMFINGYRLSLTNHGPTPVKEGSKDPRGGIFDAVFTRGDQSKLLTSRHDFKEKNLKEISDLIKKELTEGKALGLSHTYANVRINHVINLWGADFDSNGNLKAIYVTDSDSNASIGMKKYFVGVNSAGKVAISAKEIKEDNIGAQVLGLFTLSTGQDSWNQTN
Protein: GDSL esterase/lipase ESM1 (EC 3.1.1.-) (Extracellular lipase ESM1) (Protein EPITHIOSPECIFIER MODIFIER 1) (AtESM1) (Q9LJG3)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Represses or inhibits nitriles production from methionine-derived and from indol-3-ylmethyl glucosinolates. Favors isothiocyanate production.
Subcellular location: Secreted {ECO:0000305}.
Interaction partners:
- N-
- Myrosinase 1
- Myrosinase 2
- Transcription factor MYB29
- Methylthioalkylmalate synthase 1, chloroplastic
- Probable inactive 2-oxoglutarate-dependent dioxygenase AOP2
- Methylthioalkylmalate synthase 3, chloroplastic
- Cytochrome P450 81F1
- Cytochrome P450 81F3
- Cytochrome P450 81F4
Sequence:
MADNLNLVSVLGVLLVLTIFHNPIIVYAGEGVPNVALFTFGDSYYDAGNKVFLSQRKDLPQTYWPYGKSRDYPNGKFSDGHIVPDFIADFISIPNGVLPPVLKPGVDISRGVSFAVADASILGAPVESMTLNQQVVKFKNMKSNWNDSYIEKSLFMIYIGTEDYLNFTKANPNADASAQQAFVTNVINRLKNDIKLLYSLGASKFVVQLLAPLGCLPIVRQEYKTGNECYELLNDLAKQHNGKIGPMLNEFAKISTSPYGFQFTVFDFYNAVLRRIATGRSLNYRFFVTNTSCCGVGTHNAYGCGKGNVHSKLCEYQRSYFFFDGRHNTEKAQEEMAHLLYGADPDVVQPMTVRELIVYPTGETMREYWEPNNLAIRRRPSRDFYLGLAAYY
Protein: Phosphodiesterase (EC 3.1.4.-) (E7F6Z8)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Interaction partners:
- Calmodulin
- Ectonucleotide pyrophosphatase/phosphodiesterase 1
- Adenine phosphoribosyltransferase.
- Calmodulin-like protein 4
- Adenosine kinase b.
- Adenosine kinase
- Inosine triphosphate pyrophosphatase
- Deoxycytidine kinase 2.
- Deoxycytidine kinase.
- GTP:AMP phosphotransferase AK3, mitochondrial
Sequence:
MDSLANDTDGLENSLKYSKCDQTEKMWIRLKGMQKYKNTSQRLRCLVKQLDKGEVNVVDLRKNIEYAASVLEAVYIDETRRLLDTEDELSDIQADSVPMEVRDWLASTFTRKMGVVRRRPEEKPRFRSIVHAVQAGIFVERMYRRTSNMAGLTYPPSVITALKDVDKWSFDVFKLQEASSDHALKFLVYELLTRYDLISRFRIPVSSLVSFVEALEIGYSKHRNPYHNLIHAADVTQTAHYLMLHTGVMHWLTELEILAMVFAAAIHDFEHTGTTNNFHIQTRSEVAILYNDRSVLENHHVSAAYRLMQEDEMNILVNLSKDDWRELRTLVIEMVMSTDMSCHFQQIKTMRNSLQQPEGIDKAKALSLMLHAADISHPAKGWKLHYRWTQALMEEFFRQGDKEAELGLPFSPLCDRKATMIAQSQIGFIDFIVEPTFSVLVDTTEKIISPLIEEAVKSGGVRRSSLTGRGSAAVVESVQRHSDRGSNDECGGSTDYSLCGIDQKHVRHLLSEIIQNNKERWKELSVQELANKQHERMSDLQEEPMRSTQLTLSQENHDSESKSLNELNNTDSTHSSQDSLDQSSQSPTEGAGDASPEEHSSETLPWNGKSA
Protein: Protein RESTRICTED TEV MOVEMENT 1 (Jacalin-related lectin 1) (Restricted tobacco etch virus movement protein 1) (Q9SE37)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Required for the restriction of long-distance movement of the pathogenic tobacco etch virus (TEV) without causing a hypersensitive response or inducing systemic acquired resistance.
Subcellular location: Cytoplasm {ECO:0000269|PubMed:11743111}. Note=Soluble protein present in sieve elements in a punctate pattern of 1 to 2 um spheres.
Interaction partners:
- Protein RESTRICTED TEV MOVEMENT 3
- Protein RESTRICTED TEV MOVEMENT 2
- Jacalin-related lectin 15
- At2g27140
- HSP20-like chaperones superfamily protein
- MATH domain and coiled-coil domain-containing protein At3g58360
- Enabled-like protein
- Protein SIEVE ELEMENT OCCLUSION A
- RNA-dependent RNA polymerase 1
- Probable cysteine protease RD19B
Sequence:
MKIGPVGKHDARSTTIVNWDEGSHDGFISQIFLSHGVAGIMSIQFQFVMDGKLVLSDRHGPFSGNMFDVIELNYPHEYITGISGEYYKYEANNPHMRSLKFNTNTSEYGPFGTSGSSNDKFAFKLGKSPQFGGFHGTYDASGLQYIGVYLRPKTVLPKIDTGNAEETESKIVLG
Protein: Betaine--homocysteine S-methyltransferase 1 (EC 2.1.1.5) (O09171)
Organism: Rattus norvegicus (Rat)
Function: Involved in the regulation of homocysteine metabolism. Converts betaine and homocysteine to dimethylglycine and methionine, respectively. This reaction is also required for the irreversible oxidation of choline.
Subcellular location: Cytoplasm, cytosol {ECO:0000269|PubMed:12487625, ECO:0000269|PubMed:28288879}. Nucleus {ECO:0000269|PubMed:28288879}. Note=Predominantly localized in the cytoplasm with a small fraction detected in the nucleus. Translocates into the nucleus upon oxidative stress. {ECO:0000269|PubMed:28288879}.
Interaction partners:
- Dimethylglycine dehydrogenase, mitochondrial
- S-adenosylmethionine synthase isoform type-1
- Cystathionine beta-synthase
- Adenosylhomocysteinase
- Cystathionine gamma-lyase
- S-adenosylmethionine synthase isoform type-2
- S-adenosylhomocysteine hydrolase-like protein 1
- Adenosylhomocysteinase-like 2
- Methylenetetrahydrofolate reductase
- Alpha-aminoadipic semialdehyde dehydrogenase
Sequence:
MAPIAGKKAKRGILERLNAGEVVIGDGGFVFALEKRGYVKAGPWTPEAAVEHPEAVRQLHREFLRAGSNVMQTFTFYASEDKLENRGNYVAEKISGQKVNEAACDIARQVADEGDALVAGGVSQTPSYLSCKSETEVKKIFHQQLEVFMKKNVDFLIAEYFEHVEEAVWAVEALKTSGKPIAATMCIGPEGDLHGVSPGECAVRLVKAGAAIVGVNCHFDPSTSLQTIKLMKEGLEAARLKAYLMSHALAYHTPDCGKQGFIDLPEFPFGLEPRVATRWDIQKYAREAYNLGVRYIGGCCGFEPYHIRAIAEELAPERGFLPPASEKHGSWGSGLDMHTKPWIRARARKEYWQNLRIASGRPYNPSMSKPDAWGVTKGAAELMQQKEATTEQQLRALFEKQKFKSAQ
Protein: Krueppel-like factor 3 (Basic krueppel-like factor) (CACCC-box-binding protein BKLF) (TEF-2) (P57682)
Organism: Homo sapiens (Human)
Function: Binds to the CACCC box of erythroid cell-expressed genes. May play a role in hematopoiesis (By similarity).
Subcellular location: Nucleus {ECO:0000305}.
Interaction partners:
- C-terminal-binding protein 1
- C-terminal-binding protein 2
- Four and a half LIM domains protein 3
Sequence:
MLMFDPVPVKQEAMDPVSVSYPSNYMESMKPNKYGVIYSTPLPEKFFQTPEGLSHGIQMEPVDLTVNKRSSPPSAGNSPSSLKFPSSHRRASPGLSMPSSSPPIKKYSPPSPGVQPFGVPLSMPPVMAAALSRHGIRSPGILPVIQPVVVQPVPFMYTSHLQQPLMVSLSEEMENSSSSMQVPVIESYEKPISQKKIKIEPGIEPQRTDYYPEEMSPPLMNSVSPPQALLQENHPSVIVQPGKRPLPVESPDTQRKRRIHRCDYDGCNKVYTKSSHLKAHRRTHTGEKPYKCTWEGCTWKFARSDELTRHFRKHTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV
Protein: Stearoyl-CoA desaturase 4 (EC 1.14.19.1) (Acyl-CoA desaturase 4) (Delta(9)-desaturase 4) (Delta-9 desaturase 4) (Fatty acid desaturase 4) (Q6T707)
Organism: Mus musculus (Mouse)
Function: Stearoyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates. Catalyzes the insertion of a cis double bond at the delta-9 position into fatty acyl-CoA substrates including palmitoyl-CoA and stearoyl-CoA. Required for the biosynthesis of membrane phospholipids, cholesterol esters and triglycerides (By similarity).
Subcellular location: Endoplasmic reticulum membrane {ECO:0000250|UniProtKB:O00767}; Multi-pass membrane protein {ECO:0000250|UniProtKB:O00767}. Microsome membrane {ECO:0000269|PubMed:12815040, ECO:0000269|PubMed:16443825}.
Interaction partners:
- C-C chemokine receptor type 5
Sequence:
MTAHLPQEISSRCSTTNIMEPHSRRQQDGEEKMPLQAEDIRPEIKDDLYDPSYQDEEGPPPKLEYVWRNIIFMALLHVGALYGITLVPSCKVYTWLLGVFYNVVAGLGITAGAHRLWSHRTYKARLPLRIFLIMANTMAFQNDVYEWARDHRAHHKFSETHADPHNSRRGFFFSHVGWLLVRKHPAVKEKGKNLDMSDLKAEKLVMFQRRYYKLAVTLMFIILPTLVPWYLWGETFQHSLCVSNFLRYAVLLNFTWLVNSAAHLYGYRPYDRGIGARENPFVSMASLGEGFHNYHHTFPYDYSVSEYRWHINFTTFFIDCMAALGLAYDRKKVSKAVVLARIKRTGDGSHKSS
Protein: Odorant-binding protein (Lipocalin) (allergen Phod s 1.0101) (S5ZYD3)
Organism: Phodopus sungorus (Striped hairy-footed hamster) (Djungarian hamster)
Function: May act as a pheromone.
Subcellular location: Secreted {ECO:0000269|PubMed:21912180, ECO:0000269|PubMed:24993820}.
Interaction partners:
Sequence:
NDYAELEGKWDTIAIAADNDAKIKEEGPLRLYVRELYCNEDCSEMEVTFYVNANNQCSKTTVIGYKQADGTYRTQFEGDNRFQPVYATPENIVFTSKNVDRAGQETNLIFVVGKSQPLTPEQHEKLVEFAHENNIPEENIHNVLATDTCPK
Protein: D-alanyl-D-alanine carboxypeptidase DacB (DD-carboxypeptidase) (DD-peptidase) (EC 3.4.16.4) (D-alanyl-D-alanine endopeptidase) (DD-endopeptidase) (EC 3.4.21.-) (Penicillin-binding protein 4) (PBP-4) (P24228)
Organism: Escherichia coli (strain K12)
Function: Not involved in transpeptidation but exclusively catalyzes a DD-carboxypeptidase and DD-endopeptidase reaction.
Subcellular location: Periplasm {ECO:0000305}.
Interaction partners:
- D-alanyl-D-alanine carboxypeptidase DacA
- D-alanyl-D-alanine carboxypeptidase DacC
- D-alanyl-D-alanine carboxypeptidase DacD
- Putative D-alanyl-D-alanine carboxypeptidase
- Penicillin-binding protein 1A
- Penicillin-binding protein 1B
- Peptidoglycan D,D-transpeptidase MrdA
- Peptidoglycan D,D-transpeptidase FtsI
- D-alanyl-D-alanine endopeptidase
- 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD
Sequence:
MRFSRFIIGLTSCIAFSVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESRLYKDIYQNN
Protein: Citramalyl-CoA lyase, mitochondrial (EC 4.1.3.25) ((3S)-malyl-CoA thioesterase) (EC 3.1.2.30) (Beta-methylmalate synthase) (EC 2.3.3.-) (Citrate lyase subunit beta-like protein) (Citrate lyase beta-like) (Malate synthase) (EC 2.3.3.9) (Q8N0X4)
Organism: Homo sapiens (Human)
Function: Mitochondrial citramalyl-CoA lyase indirectly involved in the vitamin B12 metabolism. Converts citramalyl-CoA into acetyl-CoA and pyruvate in the C5-dicarboxylate catabolism pathway. The C5-dicarboxylate catabolism pathway is required to detoxify itaconate, a vitamin B12-poisoning metabolite. Also acts as a malate synthase in vitro, converting glyoxylate and acetyl-CoA to malate. Also displays malyl-CoA thioesterase activity. Also acts as a beta-methylmalate synthase in vitro, by mediating conversion of glyoxylate and propionyl-CoA to beta-methylmalate. Also has very weak citramalate synthase activity in vitro.
Subcellular location: Mitochondrion {ECO:0000250|UniProtKB:Q8R4N0}.
Interaction partners:
- Succinyl-CoA:glutarate CoA-transferase
Sequence:
MALRLLRRAARGAAAAALLRLKASLAADIPRLGYSSSSHHKYIPRRAVLYVPGNDEKKIKKIPSLNVDCAVLDCEDGVAANKKNEARLRIVKTLEDIDLGPTEKCVRVNSVSSGLAEEDLETLLQSRVLPSSLMLPKVESPEEIQWFADKFSFHLKGRKLEQPMNLIPFVETAMGLLNFKAVCEETLKVGPQVGLFLDAVVFGGEDFRASIGATSSKETLDILYARQKIVVIAKAFGLQAIDLVYIDFRDGAGLLRQSREGAAMGFTGKQVIHPNQIAVVQEQFSPSPEKIKWAEELIAAFKEHQQLGKGAFTFQGSMIDMPLLKQAQNTVTLATSIKEK
Protein: Uncharacterized protein (Q57UQ7)
Organism: Trypanosoma brucei brucei (strain 927/4 GUTat10.1)
Interaction partners:
Sequence:
MVMKAFHLSLLAATTVLLLLLPVPGRCADDIQQSSTSKHTVKFDGDNWAATVQQKEEQLREILVSDIDRYVQRNGSFLTEVLITSFDPTHNFIEILIVVVQTVRAQVSNPERQHIWPPAEVNSLITQTDYSKTLSLYEGVKRPELISVKVHDGKLHFGECDDTCRRLLKLAMVVIILMGVSLLILIIYLIVNCCRGEPKEKDESNANHPYNQDHYRTEETNK
Protein: A-type voltage-gated potassium channel KCND3 isoform X1 (Potassium voltage-gated channel subfamily D member 3 isoform X1) (Potassium voltage-gated channel, Shal-related subfamily, member 3) (A0A286Y962)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Subcellular location: Membrane {ECO:0000256|ARBA:ARBA00004141}; Multi-pass membrane protein {ECO:0000256|ARBA:ARBA00004141}.
Interaction partners:
Sequence:
MAAGVAAWLPFARAAAIGWMPVANLPMPVAPSNKNKRQDELIILNVSGRRFQTWRNTLDRYPDTLLGSSEKEFFFNEETREYFFDRDPDVFRSILNFYRTGKLHYPRYECISAYDEELAFFGIIPEIISDCCYEEYKDRKRENTERLMDDLEDNKDSKLPNMTFRETMWRAFENPHTSTMALVFYYVTGFFIALSVITNVVETVPCGYMPNQRDVPCGERYTEAFFCMDTACVMIFTVEYLMRLFAAPSRYRFMRSVMSIIDVVAILPYYIGLVMTNNEDVSGAFVTLRVFRVFRIFKFSRHSQGLRILGYTLKSCASELGFLLFSLTMAIIIFATVMFYAEKGSSSSKFTSIPASFWYTIVTMTTLGYGDMVPKTIAGKIFGSICSLSGVLVIALPVPVIVSNFSRIYHQNQRADKRKAQKVQKARLARMRISKSGSSTAFLHSKRNGLNQSLELTQLPYYKMKLSPQGSLEEDQQLKKTTSLLESQHHHLLHCLEKTTNHEFVDERLYEQGYLQTALQNFPSQSPSLSSEEGITGTCCSRRPKKNIQPLNATHTHSHTHNLQELSALHIQCGEQQPLNTSRSSLNLMSDESGSLNCKSSGLVTTAIISIPTPPSNNSRASPDAPSPPNPEAPPLLNPSSTDVVKISAL