wanglab/gogpt-training-data huggingface dataset:
Protein: AT15050p (Q8IHC2)
Organism: Drosophila melanogaster (Fruit fly)
Interaction partners:
Sequence:
MSVRAMGVLGQACRLGRCAQVLRQSHRSAPAAFNITLGSQHSPGALSLRRYSTETKQASGSVVDKHEFQAETRQLLDIVARSLYSDHEVFVRELISNASDALEKFRYTSLSAGGENLAGKDRPLEIRITTDKPLMQLIIQDTGIGMTKEELVSNLGTIARSGSKKFLEQMKGTQQGASSEASSNIIGQFGVGFYSSFIVANKVEVFTRAAVPNAPGLRWSTDGSGTYEIEEVPDVELGTRIVLHLKTDCREYADEERIKAVIKKYSNFVGSPILLNGKQANEIKPLWLLEPQSISKEQHHDFYRFISNSFDVPRFTLHYNADVPLSIHALLYFPEGKPGLFEMSRDGNTGVALYTRKVLIQSKTEHLLPKWLRFVKGVVDSEDIPLNLSRELLQNSSLIRKLSSVISTRVIRFLQERSKKQPEEYEAFYRDYGLFLKEGIVTSSDASEKEEIAKLLRFESSKSETASGRMSLEEYYNAVPAEQQNIYYLAAPNRVLAESSPYYESLKKRNELVLFCYEPYDELVLMQLGKFKSKKLVSVEKEMREESKETTATTLGEGSLLRSELDTLIPWLEEELRGQVIKVKATTRLDTHPCVITVEEMAAARHFIRTQSHQVPEQNRFALLQPELEINPKHPIIKKLNKLRESDKDLAQLIAKQLFANAMVGAGLAEDPRMLLTNMNTLLSRALEKY
Protein: DNA polymerase III subunit chi (EC 2.7.7.7) (Accessory clamp loader complex subunit chi) (Replication clamp loader subunit HolC) (P28905)
Organism: Escherichia coli (strain K12)
Function: Part of the beta sliding clamp loading complex, which hydrolyzes ATP to load the beta clamp onto primed DNA to form the DNA replication pre-initiation complex. DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.
Interaction partners:
- DNA polymerase III subunit delta'
- Single-stranded DNA-binding protein
- DNA polymerase III subunit tau
- DNA polymerase III subunit psi
- DNA polymerase III subunit alpha
- DNA polymerase III subunit delta
- Beta sliding clamp
- DNA polymerase III subunit epsilon
- DNA polymerase III subunit theta
- Valine--tRNA ligase
Sequence:
MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARPAESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYEDSLKQLARERYKAYRVAGFNLNTATWK
Protein: Vomeronasal 2, receptor 120 (A0A3Q4L2S4)
Organism: Mus musculus (Mouse)
Interaction partners:
Sequence:
MLIFVSVLLFLNFPVASCEPINPGCSLGMADAIFQDGDVLVGVFLPLHAYLTSPQLYGPDIDTTMKHFLCLYTGYIQISINM
Protein: Keratin, type II cuticular Hb4 (Keratin-84) (K84) (Type II hair keratin Hb4) (Type-II keratin Kb24) (Q9NSB2)
Organism: Homo sapiens (Human)
Interaction partners:
Sequence:
MSCRSYRVSSGHRVGNFSSCSAMTPQNLNRFRANSVSCWSGPGFRGLGSFGSRSVITFGSYSPRIAAVGSRPIHCGVRFGAGCGMGFGDGRGVGLGPRADSCVGLGFGAGSGIGYGFGGPGFGYRVGGVGVPAAPSITAVTVNKSLLTPLNLEIDPNAQRVKKDEKEQIKTLNNKFASFIDKVRFLEQQNKLLETKWSFLQEQKCIRSNLEPLFESYITNLRRQLEVLVSDQARLQAERNHLQDVLEGFKKKYEEEVVCRANAENEFVALKKDVDAAFMNKSDLEANVDTLTQEIDFLKTLYMEEIQLLQSHISETSVIVKMDNSRDLNLDGIIAEVKAQYEEVARRSRADAEAWYQTKYEEMQVTAGQHCDNLRNIRNEINELTRLIQRLKAEIEHAKAQRAKLEAAVAEAEQQGEATLSDAKCKLADLECALQQAKQDMARQLCEYQELMNAKLGLDIEIATYRRLLEGEESRLCEGVGPVNISVSSSRGGLVCGPEPLVAGSTLSRGGVTFSGSSSVCATSGVLASCGPSLGGARVAPATGDLLSTGTRSGSMLISEACVPSVPCPLPTQGGFSSCSGGRSSSVRFVSTTTSCRTKY
Protein: GTL-1 (TRPM SLOG domain-containing protein) (G5ECM4)
Organism: Caenorhabditis elegans
Subcellular location: Membrane {ECO:0000256|ARBA:ARBA00004141}; Multi-pass membrane protein {ECO:0000256|ARBA:ARBA00004141}.
Interaction partners:
- Protein ced-11
- Transient receptor ion channel domain-containing protein
- Transient-receptor-potential-like protein
- Inositol 1,4,5-trisphosphate receptor itr-1
- Ion transport domain-containing protein
- Transient receptor potential cation channel subfamily A member 1 homolog
- Ion transport domain-containing protein
- MFS domain-containing protein
- Potassium voltage-gated channel subfamily KQT member 1
- Nicotinic receptor-associated protein 1
Sequence:
MDRKRGSIVPAIHKAVAESLRANSVTVEENESERETETQTKRRRKKQRSTSSDKAPLNSAPRHVQKFDWKDMLHLADISGRKRGNSTTSHSGHATRAGSLKGKNWIECRLKMRQCSYFVPSQRFSERCGCGKERSKHTEEVLERSQNKNHPLNHLTLPGIHEVDTTDADADDNEVNLTPGRWSIQSHTEIVPTDAYGNIVFEGTAHHAQYARISFDSDPRDIVHLMMKVWKLKPPKLIITINGGLTKFDLQPKLARTFRKGIMKIAKSTDAWIITSGLDEGVVKHLDSALHDHGNHTSKNHVVAIGIASWGMLKQRSRFVGKDSTVTYATNVFNNTRLKELNDNHSYFLFSDNGTVNRYGAEIIMRKRLEAYLAQGDKKRSAIPLVCVVLEGGAFTIKMVHDYVTTIPRIPVIVCDGSGRAADILAFAHQAVSQNGFLSDNIRNQLVNIVRRIFGYDPKTAQKLIKQIVECSTNKSLMTIFRLGESSREDLDHVIMSCLLKGQNLSPPEQLQLALAWNRADIARTEIFANGTEWTTQDLHNAMIEALSNDRIDFVHLLLENGVSMQKFLTYGRLEHLYNTDKGPQNTLRTNLLVDSKHHIKLVEVGRLVENLMGNLYKSNYTKEEFKNQYFLFNNRKQFGKRVHSNSNGGRNDVIGPSGDAGRERMSSMQISLINNARNSIISLFNGGGRKRESDDEDDFSNLEEEANMDFTFRYPYSDLMIWAVLTKRQKMAKLMWTHGEEGMAKALVASRLYVSLAKTASLATGEIGMSQDFTEFSDEFSELAVEVLEYCTKHGRDQTLRLLTCELANWGDETCLSLAANNGHRKFLAHPCCQMLLSDLWQGGLLMKNNQNSKVLTCLAAPPLIFLLGFKTKEQLMLQPKTAAEHDEEMSDSEMNSAEDTDTSSDSSSDSDDSDEEDAKLRAQSLSADQPLSIHRLVRDKLNFSEKKKPDMGISRIVVAPPIVTGRNRARTMSIKKSKKNVIKPPACLKIETSDDDEQEQKKATEMYINRTGKRGSVAVAMNHDDMYIDPSEELDTQTRQKSSREFSSSRNVTVQVYTQRPLSWKKKIMEFYKAPITTYWLWFFAFIWFLILLTYNLLVKTQRIASWSEWYVFAYIFVWTLEIGRKVVSTIMMDTSKPVLKQLRVFFFQYRNGLLAFGLLTYLIAYFIRLSPTTKTLGRILIICNSVIWSLKLVDYLSVQQGLGPYINIVAEMIPTMIPLCVLVFITLYAFGLLRQSITYPYEDWHWILVRNIFLQPYFMLYGEVYAAEIDTCGDEIWQTHEDENIPISMLNVTHETCVPGYWIAPVGLTVFMLATNVLLMNVMVAGCTYIFEKHIQSTREIFLFERYGQVMEYESTPWLPPPFTIIYHVIWLFKLIKSSSRMFERKNLFDQSLKLFLSPDEMEKVHTFEEESVEDMKRETEKKNLSSNDERIHRTAERTDAILNRVSHLTQLEFTLKEEIRELEHKMKNMDSRHKEQMNLMLDMNKKLGKFISGKYKRGSFGGSGSDGGGGSSDNSKLEPNNSVPMITVDGPSPIGSRRTSGQYLKRDSLQAKKKITENRRSSLEQPKIPSIQFNLMEDQDESAAESATEEVSISIPVPQMRVRQVTESDKSDLSEDDLITREDAPPTSINLPRGPRRHALYSTIADAIETEDDFYADSPVPMPMTPVQPADGSFFGENDSRYQRDDSDYE
Protein: Conserved protein (O53931)
Organism: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Interaction partners:
- Conserved protein
- Uncharacterized protein
- Ferredoxin FdxE
Sequence:
MQNHDYVTYEEFGRRFFEVAVTPDRVAAAFADIAGSEFAMEPISQGPGGIAKVSANVKIREPRVTRKLGDLITFVIHIPLSIDLLLDLRLDKQRFMVAGDIALRATARAAEPLLLIVDVAKPRPSDITVNVSSKSIRGEVLRILAGVDGEIRRFIAQYVSAEIDSPKSQAAQVINVAEQLDSTWSGP
Protein: Choline transporter protein 1 (AtCTL1) (Protein SIGNIFICANT IONOME CHANGES 1) (Q94AN2)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Regulator of vesicle trafficking, including endocytosis. Necessary for secondary plasmodesmata (PD) formation and development via the secretory trafficking regulation of proteins required for PD development, thus influencing intercellular communication. Modulates ion homeostasis, especially in roots, by monitoring the transport and subsequent subcellular localization of some ion transporters. Choline transporter involved in the regulation of choline metabolite homeostasis during root and phloem development. Modulates phloem morphogenesis and conductivity. Required for procambium maintenance and sieve plate development (e.g. sieve plate and sieve pore elaboration) to mediate long-distance cell-to-cell communication via symplastic transport through the phloem. Involved in the regulation of intracellular trafficking of PIN-type auxin transporters (e.g. PIN1 and PIN3), a process controlling seedling growth, apical dominance, cell elongation and apical hook development. Modulates also membrane lipids (e.g. phospholipids and sphingolipids) homeostasis.
Subcellular location: Early endosome membrane {ECO:0000269|PubMed:27743414}; Multi-pass membrane protein {ECO:0000255}. Golgi apparatus, trans-Golgi network membrane {ECO:0000269|PubMed:25008948, ECO:0000269|PubMed:27743414, ECO:0000269|PubMed:29283991}; Multi-pass membrane protein {ECO:0000255}. Cytoplasm, cytoskeleton, phragmoplast {ECO:0000269|PubMed:25008948}. Prevacuolar compartment membrane {ECO:0000269|PubMed:29283991}; Multi-pass membrane protein {ECO:0000255}. Cell membrane {ECO:0000269|PubMed:29283991}; Multi-pass membrane protein {ECO:0000255}. Note=Associated transiently with the phragmoplast during cytokinesis. Follows a polar localization in the forming sieve plates. {ECO:0000269|PubMed:25008948}.
Interaction partners:
- PLASMODESMATA CALLOSE-BINDING PROTEIN 1
- PLASMODESMATA CALLOSE-BINDING PROTEIN 2
- cyclin-dependent kinase
Sequence:
MRGPLGAVIGRYTSSDGSAPNDGIIKHNRKCRDITFLIIFIAFWVSMIVNSSFGFNQGNPLRLTYGLDYEGNVCGSKHRHRDLTQLELRYWLNPNQVYESGLKDGELKLANARTICLLDCPAPSDDTLNWVCDYPDGEIRLKMNDWIDRNYDYFEFLTPEMRNSSLQLQGPCYPVIFPSVNVYWSCQYIARASNSSLRHWQQMGGVNIQEDMIIDKSIRRSMNSRASVLKRYVADIGKSWPVLIVCGGLVPLFLSIIWLLLIRHFVAAMPWITVVLFNMLLISVTVFYYLKAGWIGNDAVTPIIGEHDPYFHVYGRELTHVRGVAILMTFISVVAILTSIAIIRRILMATSVLKVAAKVIGEVQALIIFPAIPFAMLAIFYMFWISAALHLFSSGQVVQNNCNNTNCCAYDLVLKKVNCDRCCGYSIHYTPHITIAIFFHLFGCYWATQFFIASSATVIAGSVASYYWAQGEASPEIPFLPVFASMKRLARYNLGSVALGSLIVSFVESVRFILEAIRRKTKVSGTIPDHWFWRMAHYTSRGCLKSVEWTIKSVNRNAYIMIAITGKSFCKSSAIATELIISNILRIGKVNVIGDVILFLGKLCVSLFSALFGFLMLDSHRYRASHNKVSSPLLPVLACWALGYIVATLFFAVVEMSIDTIILSFCQDSEENQGNAQHAPPLLLETLDSNQEEEVQSLTH
Protein: Protein Gawky (Q8SY33)
Organism: Drosophila melanogaster (Fruit fly)
Function: Required for gene silencing mediated by micro-RNAs (miRNAs). Silences both polyadenylated and deadenylated mRNAs. Required for miRNA-mediated translational repression and mRNA decay. Not required for miRNA target recognition. Necessary to initiate but not to maintain silencing. Promotes mRNA deadenylation through the recruitment of the CCR4-NOT and PAN complexes and promotes decapping by the DCP1-DCP2 complex. Dissociates from silenced mRNAs after deadenylation. Required for completion of nuclear divisions during early embryonic development.
Subcellular location: Cytoplasm, P-body {ECO:0000269|PubMed:16815998, ECO:0000269|PubMed:16880270}.
Interaction partners:
- Protein argonaute-1
- Polyadenylate-binding protein
- PAN2-PAN3 deadenylation complex catalytic subunit PAN2
- GIGYF family protein Gyf
- Not1, isoform H
- PAN2-PAN3 deadenylation complex subunit PAN3
- Endoribonuclease Dcr-2
- Protein associated with topo II related - 1, isoform A
- Protein argonaute-2
- poly
Sequence:
MREALFSQDGWGCQHVNQDTNWEVPSSPEPANKDAPGPPMWKPSINNGTDLWESNLRNGGQPAAQQVPKPSWGHTPSSNLGGTWGEDDDGADSSSVWTGGAVSNAGSGAAVGVNQAGVNVGPGGVVSSGGPQWGQGVVGVGLGSTGGNGSSNITGSSGVATGSSGNSSNAGNGWGDPREIRPLGVGGSMDIRNVEHRGGNGSGATSSDPRDIRMIDPRDPIRGDPRGISGRLNGTSEMWGHHPQMSHNQLQGINKMVGQSVATASTSVGTSGSGIGPGGPGPSTVSGNIPTQWGPAQPVSVGVSGPKDMSKQISGWEEPSPPPQRRSIPNYDDGTSLWGQQTRVPAASGHWKDMTDSIGRSSHLMRGQSQTGGIGIAGVGNSNVPVGANPSNPISSVVGPQARIPSVGGVQHKPDGGAMWVHSGNVGGRNNVAAVTTWGDDTHSVNVGAPSSGSVSSNNWVDDKSNSTLAQNSWSDPAPVGVSWGNKQSKPPSNSASSGWSTAAGVVDGVDLGSEWNTHGGIIGKSQQQQKLAGLNVGMVNVINAEIIKQSKQYRILVENGFKKEDVERALVIANMNIEEAADMLRANSSLSMDGWRRHDESLGSYADHNSSTSSGGFAGRYPVNSGQPSMSFPHNNLMNNMGGTAVTGGNNNTNMTALQVQKYLNQGQHGVAVGPQAVGNSSAVSVGFGQNTSNAAVAGAASVNIAANTNNQPSGQQIRMLGQQIQLAIHSGFISSQILTQPLTQTTLNLLNQLLSNIKHLQAAQQSLTRGGNVNPMAVNVAISKYKQQIQNLQNQINAQQAVYVKQQNMQPTSQQQQPQQQQLPSVHLSNSGNDYLRGHDAINNLQSNFSELNINKPSGYQGASNQQSRLNQWKLPVLDKEINSDSTEFSRAPGATKQNLTANTSNINSLGLQNDSTWSTGRSIGDGWPDPSSDNENKDWSVAQPTSAATAYTDLVQEFEPGKPWKGSQIKSIEDDPSITPGSVARSPLSINSTPKDADIFANTGKNSPTDLPPLSLSSSTWSFNPNQNYPSHSWSDNSQQCTATSELWTSPLNKSSSRGPPPGLTANSNKSANSNASTPTTITGGANGWLQPRSGGVQTTNTNWTGGNTTWGSSWLLLKNLTAQIDGPTLRTLCMQHGPLVSFHPYLNQGIALCKYTTREEANKAQMALNNCVLANTTIFAESPSENEVQSIMQHLPQTPSSTSSSGTSGGNVGGVGTSANNANSGSAACLSGNNSGNGNGSASGAGSGNNGNSSCNNSAAGGGSSSNNTITTVANSNLVGSSGSVSNSSGVTANSSTVSVVSCTASGNSINGAGTANSSGSKSSANNLASGQSSASNLTNSTNSTWRQTSQNQALQSQSRPSGREADFDYISLVYSIVDD
Protein: V-type proton ATPase subunit d 2 (V-ATPase subunit d 2) (Osteoclast-specific vacuolar ATP synthase) (Vacuolar proton pump subunit d 2) (Q80SY3)
Organism: Mus musculus (Mouse)
Function: Subunit of the V0 complex of vacuolar(H+)-ATPase (V-ATPase), a multisubunit enzyme composed of a peripheral complex (V1) that hydrolyzes ATP and a membrane integral complex (V0) that translocates protons. V-ATPase is responsible for acidifying and maintaining the pH of intracellular compartments and in some cell types, is targeted to the plasma membrane, where it is responsible for acidifying the extracellular environment (By similarity). May play a role in coupling of proton transport and ATP hydrolysis. Regulator of osteoclast fusion and bone formation.
Interaction partners:
- V-type proton ATPase subunit H
- V-type proton ATPase 16 kDa proteolipid subunit c
- V-type proton ATPase 21 kDa proteolipid subunit c''
- V-type proton ATPase 116 kDa subunit a 1
- V-type proton ATPase subunit D
- V-type proton ATPase subunit S1
- V-type proton ATPase 116 kDa subunit a 4
- V-type proton ATPase catalytic subunit A
- V-type proton ATPase subunit a
- V-type proton ATPase subunit E 1
Sequence:
MLETAELYFNVDHGYLEGLVRGCKASLLTQQDYVNLVQCETLEDLKIHLQTTDYGNFLANETNPLTVSKIDTEMRKKLCREFDYFRNHSLEPLSTFLTYMTCSYMIDNIILLMNGALQKKSVKEVLAKCHPLGRFTEMEAVNIAETPSDLFKAVLVETPLAPFFQDCMSENTLDELNIELLRNKLYKSYLEAFYKFCKDHGDVTADVMCPILEFEADRRALIITLNSFGTELSKEDRETLFPTCGRLYPEGLRLLAQAEDFEQMKRVADNYGVYKPLFDAVGGSGGKTLEDVFYEREVQMNVLAFNRQFHYGVFYAYVKLKEQEMRNIVWIAECISQRHRTKINSYIPIL
Protein: Elongation factor 1-delta (EF-1-delta) (P57776)
Organism: Mus musculus (Mouse)
Function: EF-1-beta and EF-1-delta stimulate the exchange of GDP bound to EF-1-alpha to GTP, regenerating EF-1-alpha for another round of transfer of aminoacyl-tRNAs to the ribosome.
Subcellular location: [Isoform 3]: Nucleus {ECO:0000250|UniProtKB:P29692}.
Interaction partners:
- Elongation factor 1-gamma
- Elongation factor 1-beta
- Valine--tRNA ligase
- Elongation factor 1-alpha 1
- Small ribosomal subunit protein eS1
- Small ribosomal subunit protein uS3
- Elongation factor 1-alpha 2
- Large ribosomal subunit protein uL14
- Large ribosomal subunit protein eL18
- Translationally-controlled tumor protein
Sequence:
MATNFLAHEKIWFDKFKYDDAERRFYEQMNGPVTSGSRQENGASVILRDIARARENIQKSLAGSSGPGASSGPGGDHSELIVRITSLEVENQNLRGVVQDLQQAISKLEARLSSLEKSSPTPRATAPQTQHVSPMRQVEPPTKKGATPAEDDEDKDIDLFGSDEEEEDKEAARLREERLRQYAEKKAKKPTLVAKSSILLDVKPWDDETDMAQLETCVRSIQLDGLVWGASKLVPVGYGIRKLQIQCVVEDDKVGTDLLEEEITKFEEHVQSVDIAAFDKI
Protein: Ethylene-responsive transcription factor WIN1 (Protein SHINE 1) (Protein WAX INDUCER 1) (Q9XI33)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Promotes cuticle formation by inducing the expression of enzymes involved in wax biosynthesis. Confers drought resistance. Acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity).
Subcellular location: Nucleus {ECO:0000305}.
Interaction partners:
- Transcription factor MYB106
- Very-long-chain aldehyde decarbonylase CER1
- Fatty acyl-CoA reductase 3
- Protein ECERIFERUM 2
- Transcription factor MYB16
- 3-ketoacyl-CoA synthase 6
- Transcription factor MYB96
- Transcription factor MYB94
- Very-long-chain aldehyde decarbonylase CER3
- Long chain acyl-CoA synthetase 2
Sequence:
MVQTKKFRGVRQRHWGSWVAEIRHPLLKRRIWLGTFETAEEAARAYDEAAVLMSGRNAKTNFPLNNNNTGETSEGKTDISASSTMSSSTSSSSLSSILSAKLRKCCKSPSPSLTCLRLDTASSHIGVWQKRAGSKSDSSWVMTVELGPASSSQETTSKASQDAILAPTTEVEIGGSREEVLDEEEKVALQMIEELLNTN
Protein: Terpene synthase 5 (RcSeTPS5) (EC 4.2.3.-) (B9SBU9)
Organism: Ricinus communis (Castor bean)
Function: Catalyzes the cyclization of farnesyl diphosphate to multiple sesquiterpenes, such as olefins and sesquiterpene alcohols.
Interaction partners:
Sequence:
MATEGLLSAETDQDVARFLANFPPTEWGYSFASLLPQDSEFESHTKELDLVKEKVKDMLMQSRKELTENIEFVNCLCRLGVSYHFESEIIEQLSHIFISLPKILEENDYSLYILTLLFRVLRQHGYKMPCDVFNKFKDSNGEFKKCMTADVRGLLSLYEATFLSVHGEDILDEALAFTRQHLETLAEKSSPHLARHIRNALHLPFHHAPERLEILQYICFYEGEKSMNETLLKFAKLDFNRLQLLYRKELGLLSRWWKDINLTEKLPYTRDRIVEAYAWAAGIIIDPQFSRARLQFAKHLILISVMDDTYDSYGTFDELKHFTAALQRFTFEPTIELPEYMKFLYNILWNFFQETEKDETQGCACKTSFAREMLKELARSYFAEAEWYNDGVLPTFDEFMQFGLVSSTFDYHASAFFLGVEDLGMKEFIWLRDNPTIAKTAKLFGRLFNDIAIREDEQKKGDYPSAIKCYMNDHDVSLEKAKEDILKMLEDGWKDMNEELMKPTTVPKILTKFSINFVRMSDFTYRGGIDKYTCGTELKEFVKKLTIFPLQI
Protein: Auxin-responsive protein SAUR19 (Protein SMALL AUXIN UP RNA 19) (Q9FJG1)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Provide a mechanistic link between auxin and plasma membrane H(+)-ATPases (PM H(+)-ATPases, e.g. AHA1 and AHA2), and triggers PM H(+)-ATPases activity by promoting phosphorylation of their C-terminal autoinhibitory domain as a result of PP2C-D subfamily of type 2C phosphatases inhibition, thus leading to the acidification of the apoplast and the facilitation of solutes and water uptake to drive cell expansion. Prevents the apical hook maintenance of etiolated seedlings. Functions as positive effectors of cell expansion through modulation of auxin transport.
Subcellular location: Cell membrane {ECO:0000269|PubMed:22348445}; Peripheral membrane protein {ECO:0000269|PubMed:22348445}.
Interaction partners:
- Auxin-responsive protein SAUR63
- AT-hook motif nuclear-localized protein 29
- Auxin-responsive protein SAUR76
- ATPase 2, plasma membrane-type
- Auxin-responsive protein SAUR41
- Auxin-responsive protein IAA19
- Probable protein phosphatase 2C 79
- Probable protein phosphatase 2C 21
- Probable protein phosphatase 2C 64
- Auxin transporter protein 1
Sequence:
MAFVRSLLGAKKILSRSTAAGSAAPKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEEFGFAHPMGGLTIPCPEDTFINVTSRLQ
Protein: Always early protein (Q9NFM3)
Organism: Drosophila melanogaster (Fruit fly)
Subcellular location: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
Interaction partners:
Sequence:
MSRHQLKKPRKMVAAWQNDELFIKRPNFAPRIRISEKPEIQGRIKPGVASKRTENFTKKPSNISVDVSEDEKAKEKEKEQDPYSNDFILGKRLYNFLKYLSSHRWIWCEFVDSFLDKPTLTMGYDMKRFIAEYCPLLHSCFMPRRGWQLVRRNMGKARRFSAAFIELEREELECQRRIVRQLQQHKFNPKENVGYLDQIPKRVPLPLAKDATVSSFLHGNSFEGIVNGTVMGYDPQDYTYLVRFNRNDNAVVLSLPDSQLYSDEETAAVPLSIIMRGNKSSSVISESAKTEKFGNKRYTKELLESVLRVGKLQDVKHKILMDLARMNEDFETFKEIGSSSSRRDAKVTPQRENLQRRYSASMITLHRVNADILEPLRILHDYLVEYQKQDEEEESKRGRPASEVYQKCRMQAEQDLKTAADEKFLKIESDRTQEFVRNLHTILYLNGKLGRENSSHLETIIADLVTHMVDNIQPSLGRKLKDGVDSLEPLRQQVVQIFKDVKKPERFQITQQAPMQTEDGIYNFVVEAQPDTPS
Protein: Citrate synthase 3, peroxisomal (EC 2.3.3.16) (Q9SJH7)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Peroxisomal citrate synthase required for the fatty acid respiration in seedlings, citrate being exported from peroxisomes into mitochondria during respiration of triacylglycerol (TAG). Indeed, complete respiration requires the transfer of carbon in the form of citrate from the peroxisome to the mitochondria.
Subcellular location: Peroxisome {ECO:0000269|PubMed:15923350}.
Interaction partners:
- Aconitate hydratase 1
- Aconitate hydratase 2, mitochondrial
- Aconitate hydratase 3, mitochondrial
- Malate synthase
- UPF0235 protein At5g63440
- ATP-citrate synthase beta chain protein 1
- ATP-citrate synthase alpha chain protein 3
- ATP-citrate synthase beta chain protein 2
- Peroxisomal isocitrate dehydrogenase
- Isocitrate dehydrogenase, chloroplastic/mitochondrial
Sequence:
MEISERVRARLAVLSGHLSEGKQDSPAIERWCTSADTSVAPLGSLKGTLTIVDERTGKNYKVPVSDDGTVKAVDFKKIVTGKEDKGLKLYDPGYLNTAPVRSSISYIDGDEGILRYRGYPIEEMAENSTFLEVAYLLMYGNLPSESQLSDWEFAVSQHSAVPQGVLDIIQSMPHDAHPMGVLVSAMSALSIFHPDANPALRGQDIYDSKQVRDKQIIRIIGKAPTIAAAAYLRMAGRPPVLPSGNLPYADNFLYMLDSLGNRSYKPNPRLARVLDILFILHAEHEMNCSTAAARHLASSGVDVYTAVAGAVGALYGPLHGGANEAVLKMLSEIGTVENIPEFIEGVKNRKRKMSGFGHRVYKNYDPRAKVIKNLADEVFSIVGKDPLIEVAVALEKAALSDDYFVKRKLYPNVDFYSGLIYRAMGFPPEFFTVLFAIPRMAGYLSHWKESLDDPDTKIMRPQQVYTGVWLRHYTPVRERIVTDDSKESDKLGQVATSNASRRRLAGSSV
Protein: Adiponectin receptor 1 (Q6P746)
Organism: Rattus norvegicus (Rat)
Subcellular location: Membrane {ECO:0000256|ARBA:ARBA00004141}; Multi-pass membrane protein {ECO:0000256|ARBA:ARBA00004141}.
Interaction partners:
Sequence:
MSSHKGSAVAQGNGAPSSNREADTVELAELGPLLEEKGKRAATSPAKAEEEQACPVPQEEEEEVRVLTLPLQAHHAMEKMEEFVYKVWEGRWRVIPYDVLPDWLKDNDYLLHGHRPPMPSFRACFKSIFRIHTETGNIWTHLLGFVLFLFLGILTMLRPNMYFMAPLQEKVVFGMFFLGAVLCLSFSWLFHTVYCHSEKVSRTFSKLDYSGIALLIMGSFVPWLYYSFYCSPQPRLIYLSIVCVLGISAIIVAQWDRFATPKHRQTRAGVFLGLGLSGVVPTMHFTIAEGFVKATTVGQMGWFFLMAVMYITGAGLYAARIPERFFPGKFDIWFQSHQIFHVLVVAAAFVHFYGVSNLQEFRYGLEGGCTDDSLL
Protein: Conserved protein (I6Y946)
Organism: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Interaction partners:
- Uncharacterized membrane protein Rv2723
- Probable pyruvate formate lyase activating protein PflA
- Divalent metal cation transporter MntH
- Phage-related replication protein
Sequence:
MTTTSDQNAAAPPRFDGLRALFINATLKRSPELSHTDGLIERSSGIMREHGVQVDTLRAVDHDIATGVWPDMTEHGWATDEWPALYRRVLDAHILVLCGPIWLGDNSSVMKRVIERLYACSSLLNEDGQYAYYGRAGGCLITGNEDGVKHCAMNVLYSLQHLGYTIPPQADAGWIGEAGPGPSYLDPGSGGPENDFTNRNTTFMTFNLMHIAQMLRVAGGIPAYGNQRTKWDAGCRPDFANPDYR
Protein: HXXXD-type acyl-transferase family protein (F4JAD2)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Interaction partners:
Sequence:
MPRSDNSCPFVVEKSEVVLVKPSKPTPDVTLSLSTIDNDPNNEVILDILCVFSPNPYVRDHTNYHPASFIQLALSNALVYYYPLAGKLHRRTSDQTLQLDCTQGDGVPLIKATASCTLSSLNYLESGNHLEATYQLVPSHDTLKGCNLGYRPLALQITKFTCGGMTIGSVHSHTVCDGIGMAQFSQAILELAAGRAQPTVIPVWDRHMITSNQISTLCKLGNDKNNPKLVDVEKDCSSPDTPTEDMVREILNITSEDITKLKNIIIEDENLTNEKEKNMKITTVEVLAAYVWRARCRAMKLNPDTITDLVISVSIRSSIEPPLPEGYYGNAFTHASVALTAKELSKTPISRLVRLIKDAKRAALDNGYVCEQLREMENTMKLKLASKEIHGGVFMMLTDWRHLGLDQDVWGGLVNIIPLVPLTLPFLCVLLPASKAVPGKSGGVRVLTTLPRDAMAKFKEEIDAVLHP
Protein: Probable serine/threonine-protein kinase qkgA (EC 2.7.11.1) (Quick growth protein qkgA) (Ras of complex proteins and C-terminal of roc 2) (Q8SSS9)
Organism: Dictyostelium discoideum (Social amoeba)
Function: Involved in growth, and during development, in aggregation.
Interaction partners:
- SAP DNA-binding domain-containing protein
- Uncharacterized protein
- Probable serine/threonine-protein kinase roco6
- Uncharacterized protein
- Probable serine/threonine-protein kinase roco11
- Latrophilin receptor-like protein A
- Tubulin beta chain
- Probable serine/threonine-protein kinase roco5
- Probable serine/threonine-protein kinase roco8
- Tubulin alpha chain
Sequence:
MDLEQDEWMSQRQRQQQMEFSRIGIEVIGSKKDLIVNSMKNHETTLTIINETYRIVYYDQYESKFTSCNIITFDGKDKRSIKKMKRVVQKLSNESTNSSHQFDLHSHALLQSSSSSSSSSTSSSPSLTSSPSSPISTSPPYHSSPQLLEHLLHQQQPITSVGSKPSFFVIINLYNDDRQSYMSEIVSFAGSFQFIEWRNDESWKEVFKLSSNLLTYHVKKNELARACTLGDINLLDEIILSGCSKSQLKEAQGAGYTIVFNSYTSYSSGSSLVVSGTMALLCAIVENGTFLLLSKSNITRFPMSIINMCSQLVELDMSNNRITEIPIEITELKFLKNLNLSDNLINDIPLEICNLTLLKVLLLNENPLNNFPSSIVELGTKKLLSFCRNILEGKSCETWNKVKLMFVGEEGVGKTRLCKLLIGSKYNKKKSSSSSSSSLSSLSSALSSSSSSSSIINSNSISNSNINMVNIKNENQVTGDTVSTEGVNIHDFKSKKVEFYAWDFGGQQIFYPTHQFFLTTQSLYLLIFRVNDSNFAERVNYWVHQIKAKSGISLPIIFFVGTHIDSCTPEQLSMAESILKSNFIKYSRVKQNVINFVSCVTGKGVKELKKRLIHESEKSRLIKKDIPGSYIILEQRLSNRGANQGRMSISNSASNSSSSLLNSSSSSSPSLTSKKSSSHLKHSQQQQQQHQQQQQQLQQSIKEKYIDYDDYLNECKLSYLKPHEIKDATDFLHNLGIILHFDSPKLNNLVVLDPQWLADVMSSLITFSHSWIKLGILNHSDLQSIWGGRYKQTLWPSLLKLLEKFEVSYQLPNLSKSLIPSLLPDDPIGEILEIKDREWVPLKLAMENNYVQVFGCDYHFSFMPLGFFARLLLRILLIQGIDIKTYWKDGVLLDILTPSDKIKQQQLLQKKSIFEPTTTLSPFLCSLSLTDSQNYSPLEPPPLILNSPRVNRKFISNSTSTTSTTTSTTSTSTTSSNNITPLSMSSITPYSPTSPRTPSFSSSSTTTSSSSSSSSPSSQFCGVGCHRNINKNNGSSNELIKTLTKINNQNGSSGELIKTTTTTSTSTSTTSTTTPTTTTPTIPIKNNNNKKLPINRTVSSLCLTAKPKLQALITFIKKKSFEQSHDNDSYKLNIQVRTYNTTIDKEHSVSLFFQQLLFTIDTLISGSYQGLEVTRTIPCTHCIQLNPTIEPYHFDLGDCISALEDGRSHVYCGNDPNTPVRIDYIAPDICLKKVPTFTDDQILYERQIGEGGFGLIHKGKLISNKSDIAIKSLILCNSNNNNNSNNNNNSNNSNNFKNNNNEDEFIEKFQEFQHEVFIMSNLNHPNIVKLYGLMHNPPRMVMEYVEHGDLYHLCQDKERYASLGWTLKLRLMIDIAKGIGYMQNQNPPIVHRDLRSPNIFLKSLDENSPVCAKIADFGLSQQSVYSVSGLLGNFQWMAPETIGVEDESYTEKVDTYSFAMILFTILTGEIPFDEYSFGKMQFINLIREENLRPTLPFDCDPRLSNLIQLCWSTNPKKRPSFTFIIKELLEIRIDSIQTSYFDSPFLKNYPASI
Protein: Conserved protein (O06790)
Organism: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Interaction partners:
- Probable transport accessory protein MmpS1
- HNH nuclease domain-containing protein
- Possible protease
- Sphingomyelinase
- Probable cobalt/nickel-exporting P-type ATPase
- Conserved hypothetical proline and threonine rich protein
Sequence:
MYRYQVRVQQRRSEMNRWVATRSRRHTYQWITDHKSPRDHYRHISELRTSIATSSPGRCDMSPIPRIVSVSLAWAAAIGLMVPIGLAPPAMAAPCSGDAANAPPPPSAIVTDPGATALGPVRPGHGPIPTGRKPRGANDRAPLPKLGPLISALLNPGARNAAPLQQQALVPRANPGPNPAPNPPATGPQPPNATQLTPNPAPAPDPAPAAAPDPGATLAGATTSLAEWVTGPDSPNKTLERFGISGTDLGIPWDNGDPANRQVLMIFGDTFGYCAVDGHQWRYNTLFRSQDRDLGNGVHVTSGDASNRYSGSPVRQPGFSKQLINSIKWARDETGIIPTAGIAVGKTQYVNFMSIRNWGRDGEWTTNYSGIAVSKDNGQTWGVFPGTIRASGPDSGGKARFVPGNENFQMGAYLKSNDGYLYSFGTPPGRGGSAYLARVPQRFVPDLTKYQYWNGDSNSWVPNKPDAATPVIPGPVGEMSVQYNTYLKQYLALYTNGMNDVVARTAPAPQGPWSAEQMLVSSWQMPGGIYAPMMHPWSTGKDVYFNLSLWSAYNVMLMHTVLP
Protein: Riparin-1.4 (A6MWS7)
Organism: Crinia riparia (Streambank froglet) (Flinders Ranges froglet)
Subcellular location: Secreted {ECO:0000269|PubMed:16470724}.
Interaction partners:
Sequence:
MKIIVVLAVLMLVSAQVCLVSAAEMGHSSDNELSSRDLVKRFFLPPCAYKGTCNH