wanglab/gogpt-training-data huggingface dataset:
Protein: Protein ABHD12B (EC 3.-.-.-) (Abhydrolase domain-containing protein 12B) (Alpha/beta hydrolase domain-containing protein 12B) (Q7Z5M8)
Organism: Homo sapiens (Human)
Interaction partners:
Sequence:
MDAQDCQAAASPEPPGPPARSCVAAWWDMVDRNLRYFPHSCSMLGRKIAALYDSFTSKSLKEHVFLPLIDMLIYFNFFKAPFLVDLKKPELKIPHTVNFYLRVEPGVMLGIWHTVPSCRGEDAKGKDCCWYEAALRDGNPIIVYLHGSAEHRAASHRLKLVKVLSDGGFHVLSVDYRGFGDSTGKPTEEGLTTDAICVYEWTKARSGITPVCLWGHSLGTGVATNAAKVLEEKGCPVDAIVLEAPFTNMWVASINYPLLKIYRNIPGFLRTLMDALRKDKIIFPNDENVKFLSSPLLILHGEDDRTVPLEYGKKLYEIARNAYRNKERVKMVIFPPGFQHNLLCKSPTLLITVRDFLSKQWS
Protein: Large ribosomal subunit protein P1 (60S acidic ribosomal protein P1) (Acidic ribosomal protein RPA2) (RP21C) (P08570)
Organism: Drosophila melanogaster (Fruit fly)
Function: Plays an important role in the elongation step of protein synthesis.
Interaction partners:
- Large ribosomal subunit protein eL8
- Large ribosomal subunit protein eL21
- Small ribosomal subunit protein uS17
- Large ribosomal subunit protein uL6
- Small ribosomal subunit protein RACK1
- Large ribosomal subunit protein uL13
- Small ribosomal subunit protein uS15
- 40S ribosomal protein S27
- 60S ribosomal protein L27
- 40S ribosomal protein S24
Sequence:
MSTKAELACVYASLILVDDDVAVTGEKINTILKAANVEVEPYWPGLFAKALEGINVKDLITNIGSGVGAAPAGGAAPAAAAAAPAAESKKEEKKKEEESDQSDDDMGFGLFD
Protein: Mitochondrial arginine transporter BAC2 (Mitochondrial basic amino acid carrier 2) (AtMBAC2) (Q9CA93)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Mitochondrial arginine transporter that catalyzes the counter-exchange of arginine with lysine, ornithine, arginine, histidine and citrulline. Substrate preference in reconstituted proteoliposomes is arginine > homoarginine > citrulline > histidine > lysine > ornithine. May be involved in the delivery of arginine, released from seed reserves, to mitochondrial arginase and the export of ornithine. May contribute to proline accumulation in response to hyperosmotic stress.
Subcellular location: Mitochondrion inner membrane {ECO:0000305|PubMed:20172963}; Multi-pass membrane protein {ECO:0000305|PubMed:20172963}.
Interaction partners:
- Arginase 1, mitochondrial
- Arginase 2, chloroplastic/mitochondrial
- Protein CHLOROPLAST VESICULATION
- Uncharacterized protein At5g39520
- von willebrand factor A domain protein
- At1g09500/F14J9_16
- Urease
- Ornithine aminotransferase, mitochondrial
- Organic cation/carnitine transporter 5
- DNA binding / transcription factor
Sequence:
MDFWPEFMATSWGREFVAGGFGGVAGIISGYPLDTLRIRQQQSSKSGSAFSILRRMLAIEGPSSLYRGMAAPLASVTFQNAMVFQIYAIFSRSFDSSVPLVEPPSYRGVALGGVATGAVQSLLLTPVELIKIRLQLQQTKSGPITLAKSILRRQGLQGLYRGLTITVLRDAPAHGLYFWTYEYVRERLHPGCRKTGQENLRTMLVAGGLAGVASWVACYPLDVVKTRLQQGHGAYEGIADCFRKSVKQEGYTVLWRGLGTAVARAFVVNGAIFAAYEVALRCLFNQSPSPDIVTGD
Protein: Magnetosome protein MamC (MM15.5) (Q93DY1)
Organism: Magnetospirillum gryphiswaldense (strain DSM 6361 / JCM 21280 / NBRC 15271 / MSR-1)
Function: Plays a role in regulating magnetite crystal size. The lumenal domain may bind the magnetite crystals, affecting crystal size and shape (By similarity).
Subcellular location: Magnetosome membrane {ECO:0000269|PubMed:11571158, ECO:0000269|PubMed:14766587, ECO:0000269|PubMed:18539817, ECO:0000269|PubMed:22007638}; Multi-pass membrane protein {ECO:0000255}. Note=Purified magnetosomes remain attached to each other (PubMed:11571158). Resistant to trypsin digestion in isolated magnetosomes (PubMed:14766587). Localizes as a filament-like structure in a straight line running through the center of the cell, in a position that corresponds to magnetosomes (PubMed:18539817, PubMed:22007638). {ECO:0000269|PubMed:11571158, ECO:0000269|PubMed:14766587, ECO:0000269|PubMed:18539817, ECO:0000269|PubMed:22007638}.
Interaction partners:
- Magnetosome protein MamD
- Magnetosome protein MamF
- Magnetosome formation protease MamE
- Actin-like protein MamK
- Magnetosome protein MamM
- Magnetosome-associated protein MamJ
- Magnetosome protein MamB
- Magnetite biomineralization protein Mms6
- Magnetosome protein MamI
- FtsZ-like protein
Sequence:
MSFQLAPYLAKSVPGIGILGGIVGGAAALAKNARLLKDKQITGTEAAIDTGKEAAGAGLATAFSAVAATAVGGGLVVSLGAALIAGVAAKYAWDLGVDFIEKELRHGKSAEATASDEDILREELA
Protein: Somatotropin (Growth hormone) (Q6LAL0)
Organism: Oreochromis mossambicus (Mozambique tilapia) (Tilapia mossambica)
Subcellular location: Secreted {ECO:0000256|ARBA:ARBA00004613, ECO:0000256|RuleBase:RU003618}.
Interaction partners:
Sequence:
MNSVVLLLSVVCLGVSSQQITDSQRLFSIAVNRVTHLHLLAQRLFSDFESSLQTEEQRQLNKIFLQDFCNSDYIISPIDKHETQRSSVLKLLSISYGLVESWEFPSRSLSGGSSLRNQISPRLSELKTGILLLIRANQDEAENYPDTDTLQHAPYGNYYQSLGGNESLRQTYELLACFKKDMHKVETYLTVAKCRLSPEANCTL
Protein: Bitesize, isoform G (Bitesize, isoform J) (Q59DX2)
Organism: Drosophila melanogaster (Fruit fly)
Subcellular location: Membrane {ECO:0000256|ARBA:ARBA00004370}.
Interaction partners:
Sequence:
MSSGRSARLPATPTQTANNKHRAAAAAAAVAAAAAVAAGEPNSNSMLQYGGSNTSATVPTTVSTASAASALGMGVTGGGMGGGMNMAMGMGMVGGMGGMGMGGGMAPYNLHGSTMGSSCESTSVERIPVDTIDALGPELAVATSQVLENLSENERKMIIEVLNRDESVRQRDATRMMLLRAELYALRRKGAAKVVGGVQPLDATQQPHQQQTTMQPSQQQQQQLEQHNNHNAHTSDPSRHCARCTTELGRITNRGAPCRVCKLRVCKACREFTSRTTDWVCVVCHKQMEIQSASGEWLKDAYALGSCSAVDHLTTSDVLRKSIRRSWTISNPEDDPNNPNSQQPVADNLYPQQQHLIEAQSAGSYPTLHQHHQQHHLPPQPRPTHGINYGSGTATPTTSSKWQLGRRVLRQSTLPSSLNNDPALSGSGGNLANYNSVNLTAPTSPHQLQKSPLYPSAYNSDDVIHMNTMPGMGVGVGVTVGDCENYVQQQQPQQQQPQLEVTPTHHRLQVRRQSTLPAQPTPAIYMSTSPNRLYSRSPERSPGEQQRYPPFMRQTSFPEPPSTYHRTKLLPSTGAPPPTVAPPPLNYESQTSSLASDEQDVGPMPKPRMTRQATLPNPEQHVKLLPTSPPKRQTSPQFRRSPEFMRQQTLPNPEAFSSGNTLTVHSTPPAKFMPISPRAKQNFLFPSVPNPRQFLSQPHVPAVGGTELGSGGSVASTGVVGGGEQYSSSQSVNIHHSRDPHSKMIKVRSHSNEEYSNTKGHPENRRLLPEIPTAVQRPGGRSPSRLVRQDCLKEERTFGEAKQQFHQFPDVTEELDNRPEYVDYFGDSATSFLESDEVQYERNYNAGFSSEPRIIYNNGSDDGSYQNSSQRPIYSAENVLADSGYGGGAGVGLGASGGSGGVPGYYPDMGTPQGFYGGAALPRTPLMHNRIRRRQSRELQMQQEELAQLSQVSDANGKGSGNEGAASGSATDSHAAERRKPEQMRSVSEDSGAKTTPKPVTRRSFSHPEKDTQPTKKTEISKIPSPRPLADILDKTRGNSKIPQARRRNSRTGIGEAEEASTGQEEEKPHGESGQGSGAEQPVNGKSLESSANKEGGDPNSSAEATHTSTLGEQELQNAVEAAAVVFKKVVLQRRKEKEKAAEEEEAKVAAEELSRSPVIGQRQADGSGSPIQSRASSETWPTQSDEDIDRLVAMHQNRSSLSSLGVRSESMASVYSGAGEGRYGTVVVKGQVEFAMQYNYKLSALEVHVVRCKDLAAVDAKRNRSDPYVKVYLLPDKSKAGKRKTKVKKHTLNPIFDETMRFHTPISSLESRTLWLTVWHSDMFGRNDFLGEVSVNLQGRLFDNPQSQWYLLQERSEPFDEVATYRGDIVVGLKYIPPENIKSSFFSRGSSITGSSSNLRKFGGSIKSVASKSERTSKGGQLHVLVKEAKHLSPIKANGTCDAFCKSYLLPDRTRSSKQKTPVVKRTLHPSWNYTFVYEDVSLEELSERALELTVWDHDRLASNEFVGGIRFSLGTGRSYGRQVEWMDATGKELSLWQNMLDRPNFWVEGSLVLRSSLDGIRANLP
Protein: Putative hydro-lyase C5H10.01 (EC 4.2.1.-) (Q09674)
Organism: Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Interaction partners:
- Uncharacterized transporter C11D3.18C
- Uncharacterized protein C11D3.15
- Probable peptide transporter ptr2
Sequence:
MTTTSIDPPVYATVDVIREPKAYDGMPKKDECRLPSYSERAITKPVEARKLIRNRLMTKSTTGWCEGYIQANLLVLPAKYRDDFVNLCVRNPVPCPLLGETEIGKPTEFKPEALAKQSNVATDIPFYCEYINGKFSRELENISKEWTEDYVGFLIGCSFSFEAALVAENFIPRHLPTGDAPPMFITNIPLCASGVFTGTFVVSMRPYPEKDLERIRKITSAYTNCHGEPVAWGWDGAKKIGVKDCGKPDFGVPVEFKEGEIPIFWGCGVTPQNVVMMSKLPEPVYSHKPGYMYLTDLTHNC
Protein: Protein phosphatase 2C 35 (OsPP2C35) (EC 3.1.3.16) (XA21-binding protein 15) (Q84T94)
Organism: Oryza sativa subsp. japonica (Rice)
Function: Protein phosphatase that acts on XA21 pathogen recognition receptor. Negatively regulates cell death and XA21-mediated innate immunity.
Subcellular location: Cell membrane {ECO:0000269|PubMed:18817453}; Peripheral membrane protein {ECO:0000269|PubMed:18817453}; Cytoplasmic side {ECO:0000269|PubMed:18817453}. Note=Associated with XA21 receptor kinase.
Interaction partners:
- Receptor kinase-like protein Xa21
- FAD-dependent oxidoreductase domain-containing protein 1
Sequence:
MGNSLACFCCGGGAGGRGGRHVAPAALPSDPAYDEGLGHSFCYVRPDKFVVPFSADDLVADAKAAAAAEGEATTFRAISGAALSANVSTPLSTSVLLLMPEESSASATASSGFESSESFAAVPLQPVPRFSSGPISAPFSGGFMSGPLERGFQSGPLDAALLSGPLPGTATSGRMGGAVPALRRSLSHGGRRLRNFTRALLARTEKFQDSADLGSPDAAAAAVAACGGDPCGLQWAQGKAGEDRVHVVVSEERGWVFVGIYDGFNGPDATDFLVSNLYAAVHRELRGLLWDQREQNVQHDQRPDQPGSAPSTTASDNQDQWGRRRRTRRSRPPRGADDDQRRWKCEWEQERDCSNLKPPTQQRLRCNSENDHVAVLKALTRALHRTEEAYLDIADKMVGEFPELALMGSCVLAMLMKGEDMYIMNVGDSRAVLATMDSVDLEQISQGSFDGSVGDCPPCLSAVQLTSDHSTSVEEEVIRIRNEHPDDPSAISKDRVKGSLKVTRAFGAGFLKQPKWNDALLEMFRIDYVGSSPYISCNPSLFHHKLSTRDRFLILSSDGLYQYFTNEEAVAQVEMFIATTPEGDPAQHLVEEVLFRAANKAGMDFHELIEIPHGDRRRYHDDVSVIVISLEGRIWRSCV
Protein: MIP08606p (Plum, isoform B) (Plum, isoform C) (Plum, isoform D) (Plum, isoform E) (Q9VBE5)
Organism: Drosophila melanogaster (Fruit fly)
Interaction partners:
- Netrin-B
- Uncharacterized protein, isoform A
- GH04176p
Sequence:
MCLFYNRRLFVIQLIEILLLLLTDHNGRLTLTKESTTVAAAVAQPKNSTALQPYLQIQKHAVTRLTISKPHSPYYLPCIPILTPYNHDQDNQPIYCSWYRNDVVVEQVSYRKNDFFIYDNGTLRLPTNEKASGEYYCKIEWDESAVISDRITVEYPVLKRLFPGQQQAANISALENKPLVLSCPFLSVPAARFSWYFGNDSLTNDNSALILTNGTLILRHLRLEQAGKYKCVAQNTFASKTHRQFIWQLQVEPKDATFYPKNEAGITETAVSEAQLLPAFQNATVFVPAGGSVLLQCHAVADFVPIVWYLQPPNNKMVRLSNNSVAYSITNASIARHEGRYSCITPLETQNFQVIVTTPPRIVSRLPVEVVYIGLSRTLTCRAEGHPEPSITWYHNGVHLNSSYTRYISGNELHVHSFDSKEEGIYQCVARNVAGEDSATGELRFNRQLEEVNPLQNIRCYPHSFHSINITFDSRTLTSMFVVYIVRNNPHSWTSFSPMKLNQTSYVVISTDLPVYEPFALITRVLFPTTEVRTGTLVPQQMILSSLRSTPVTCCTQGLMLRPIAVGNDTFVKWSQGQLENKKYFILQFSINHTHPHPAQLLNGSLQGTLTSVEEKADQVRHHLTEIQPLNQSAAATVLRNVEHEDNVVDDTLELEDDIFSLVVDASVTGILLQRFTRIKMRVLIITTENEFLGQDFRYVQWKIIENGTSEQSNMPFRLVTRESRALAFKFLDSLNETCVLECHTEIQAQMSLPSQDPKCQDRNIANSLLLVTGLKPDTRYNLHFYNCKTRIFYGDIDEKTEQDPPGTISNSKLIKQNGLKLMWEPPINPNGRVHHYDIRWSLDNVTHEAIVKECTKCSYKFPNVSETAKIHVAVRVMGDTGAGAPMYFDMINNNHTWLKEESESSHSEVYSGIAIGSLLSIACVFLFGLFIIFQQRNFKARAQGPTHLTTPTDINFGNLSSASGMPGDSAGGLSGGTLQQDCHEMQTLIPRSRYHIELLPEHSLEYQTSTAAVAVVHLANGNGSVQVARRSDQDGAAQGDLGIAGVHNLSQLPLCGVGGTSPERKTVQDAMLQEAKAFYIPYRHTPPNAVALSSSKQCAVPSGSELEVIVPPNSLPLVTTMPGLGVVGGGGSGGGGVGGSSRRSGSLSSSSASSSSNGSSKKQFHTNFVRHSNSNDGIYLLAEEEAAATLTPTSEREYAAVCLTNGFKLPADVAKSGGGTYNTTNNNNSSTNTSQKSATAKERQPRGNGNPISFSHNACKVPANGPASVNVNHSSAVKQSWPAATVVHRRAQVDPNG
Protein: Bardet-Biedl syndrome 4 (E7EXH4)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Interaction partners:
- Bardet-Biedl syndrome 1.
- Bardet-Biedl syndrome 9.
- BBSome complex member BBS2
- Bardet-Biedl syndrome 7 protein homolog
- Tetratricopeptide repeat domain 8.
- BBSome complex member BBS5
- Pericentriolar material 1.
- Leucine zipper transcription factor-like 1.
- Intraflagellar transport 81 homolog.
Sequence:
MADDAMRTDVQLPVATELKKPRLKKAPELPILEKRNWLIHLHYIRKDYETCKAIVKEQLHETQGMCEYAVYVQALIMRLEGKIQESLELFQSCAIINPTSSDNLKQVARSLFLLGKHKAAIEVYNEAARLNQKDWEISHNLGVCYIYTKDFRSAEEQLNLALQLNKHDLTYMMLGKIHLLQGDTEKAIDVYKSAVEFSPENTELLTTLGLLYMQLGKYQKAFEHLGNALTYDPNNFKAILAAGSMMQTHGDYDVAMNKYRVAAYAVPESPPLWNNIGMCFFGKKKYVAAISCLKRANYLSPFDWKILYNLGLVHLTMQQFASAFHFLSAAINLRPRMSELYMLLAVALTNLDDAENARRSYEQAVQIDESSPLVNLNFAVFLYNQGDKKAALLQYQEMERKVNTQLENSSNTEFDPELVEMAQKLGGALQAGENLYWSKPGKDGKTSQRSSSSKPSGSQQPLGTNQALGQAMSSAAGFSKSMQISAEADVSRAPSPPAGDPEDEDEVEDAAGPAKPKDKKGRAKPVAE
Protein: L-prolyl-[peptidyl-carrier protein] dehydrogenase (EC 1.3.8.14) (Q4KCY6)
Organism: Pseudomonas fluorescens (strain ATCC BAA-477 / NRRL B-23932 / Pf-5)
Function: Involved in the biosynthesis of pyoluteorin. Catalyzes the desaturation of the L-prolyl-[PltL] to yield 1H-pyrrole-2-carbonyl-[PltL].
Interaction partners:
- L-proline--[L-prolyl-carrier protein] ligase
- Putative halogenase PltD
- Thioesterase PltG
- Polyketide synthase PltC
- Enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase family protein
- Fatty acid oxidation complex subunit alpha
- Polyketide synthase PltB
- enoyl-CoA hydratase
- Enoyl-CoA hydratase/isomerase family protein
- Electron transfer flavoprotein subunit alpha
Sequence:
MDFNYDDTQKKHAAMIAQVCAEQLAACGNEHSRYFTARQWAICGEAGLLGLSIPREYGGQGLGALSTAIAMHAFGLGCTDMGLVFAAAAHQFACAMPIVEFATAETKRDVLPKLASGEFIGSNAITEPEAGSDSSNLKSRAWPQADGSYRLDGHKSFAGNAPIADIFVTYATTQPEYGALGVSGFIVHRSSAGLRVSEPLDKVCLRSCPAGEVFFDDCRVPEVNRLGEEGQGRQVFQSSMGWERACLFAAFLGMMERQLEQTIEHARTRRQFGKPIGDNQAVSHRIAQMKLRLESARLLLFRACWGMDQGDPGQLNIALSKLAISEGALASSIDAVRIFGGRGCLESFGIEAMLRDSIGTTIFSGTSDMQHEIIARELKL
Protein: Small RNA binding protein 1 (CsSRBP1) (A0A0A0LLY1)
Organism: Cucumis sativus (Cucumber)
Function: Possibly has a role in RNA transcription or processing during stress (By similarity). Binds sequence non-specifically to RNAs and DNAs (By similarity). Mediates cell-to-cell trafficking of RNA interference (RNAi) signals (small RNAs (sRNA), e.g. small interfering RNA (siRNA) and microRNA (miRNA)) which regulate growth and development, as well as responses to environmental inputs, including pathogen attack; can compromise zucchini yellow mosaic virus (ZYMV) and tobacco rattle virus (TRV) infections at the early stage.
Subcellular location: Secreted {ECO:0000269|PubMed:31812689}. Note=Observed in the phloem translocation stream. {ECO:0000269|PubMed:31812689}.
Interaction partners:
Sequence:
MASSSVEFRCFVGGLAWATDSNSLEKAFSVYGEIVEAKIVSDRETGRSRGFGFVTFLEEEAMRSAIEAMNGHILDGRNITVNEAQQRGGGGGGGYNRGGGYGGRRDGGGFSRGGGGGYGGGGGGGYGGGRDRGYGGGGGYGGGRDSRGSGGGGSEGGWRN
Protein: Protein PIN-LIKES 7 (Auxin efflux carrier-like protein 7) (Q9FKY4)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Involved in cellular auxin homeostasis by regulating auxin metabolism. Regulates intracellular auxin accumulation at the endoplasmic reticulum and thus auxin availability for nuclear auxin signaling.
Subcellular location: Endoplasmic reticulum membrane {ECO:0000269|PubMed:22504182}; Multi-pass membrane protein {ECO:0000305}.
Interaction partners:
- Uncharacterized protein
- Uncharacterized protein
- Putative F-box protein At3g10430
- RNA polymerase II C-terminal domain phosphatase-like 5
- At5g53590
- Protein DETOXIFICATION 40
Sequence:
MGFLELLEVASMPIVQVLLISVLGAFLATDYCSLLSADTRRSVNKLVFVVFTPCIMFANLAETVTLQDIISWWFMPINVGITFLVGGILGWLVVKLLNPKPQLHGLIIATCASGNMGNLMLILVPAICDEEGSPFGNRSVCRSIGLSYASFSMALGGFYIWTYSYQLVRSSATQFRALEAAGLVKSPNKDIDSDPHALLLKPHQNQDLEIQGKQKVSTRTYIKDLLHQILEELFAPPTIGAILGFVFGATNWLRNLIIGENAPLRVIQDSVKLLGEGTIPCITLILGGNLIQGLRSSAVKKSVIVGVIIVRYILLPVVGVGVVQLAGNLGYLPPDPLFRYVLMLQFALPPAMNISTMAQLFDVAQDECSVIFLWTYLVASLALTVWSTIFLSILS
Protein: COP1-interactive protein 1 (F4JZY1)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Positive regulator of abscisic acid (ABA)-mediated signaling pathways involved in abiotic stress responses (e.g. osmotic stress) and leading to various plant adaptation (e.g. stomata closure).
Subcellular location: Cell membrane {ECO:0000269|PubMed:27372427}. Cytoplasm, cytoskeleton {ECO:0000269|PubMed:7753789}. Note=Associated to the cytoskeleton in hypocotyl and cotyledon cells, but not in root cells, where observed as disconnected cytoplasmic speckles (PubMed:7753789). Localized to the plasma membrane in the epidermal cells of cotyledons and roots, including root hairs (PubMed:27372427). {ECO:0000269|PubMed:27372427, ECO:0000269|PubMed:7753789}.
Interaction partners:
- E3 ubiquitin-protein ligase COP1
- Paramyosin
- Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 7
- Pentatricopeptide repeat-containing protein At3g20730
- Pentatricopeptide repeat-containing protein At4g31070
- PPR superfamily protein
- Protein COP1 SUPPRESSOR 2
- COP1-interacting protein 4.1
- Protein NETWORKED 1A
- F2O10.4 protein
Sequence:
MKKHKFRETLKSFFEPHFDHEKGEMLKGTKTEIDEKVNKILGMVESGDVNEDESNRQVVADLVKEFYSEYQSLYRQYDDLTGEIRKKVNGKGESSSSSSSDSDSDHSSKRKVKRNGNGKVEKDVELVTGALKQQIEAANLEIADLKGKLTTTVEEKEAVDSELELALMKLKESEEISSKLKLETEKLEDEKSIALSDNRELHQKLEVAGKTETDLNQKLEDIKKERDELQTERDNGIKRFQEAEKVAEDWKTTSDQLKDETSNLKQQLEASEQRVSELTSGMNSAEEENKSLSLKVSEISDVIQQGQTTIQELISELGEMKEKYKEKESEHSSLVELHKTHERESSSQVKELEAHIESSEKLVADFTQSLNNAEEEKKLLSQKIAELSNEIQEAQNTMQELMSESGQLKESHSVKERELFSLRDIHEIHQRDSSTRASELEAQLESSKQQVSDLSASLKAAEEENKAISSKNVETMNKLEQTQNTIQELMAELGKLKDSHREKESELSSLVEVHETHQRDSSIHVKELEEQVESSKKLVAELNQTLNNAEEEKKVLSQKIAELSNEIKEAQNTIQELVSESGQLKESHSVKDRDLFSLRDIHETHQRESSTRVSELEAQLESSEQRISDLTVDLKDAEEENKAISSKNLEIMDKLEQAQNTIKELMDELGELKDRHKEKESELSSLVKSADQQVADMKQSLDNAEEEKKMLSQRILDISNEIQEAQKTIQEHMSESEQLKESHGVKERELTGLRDIHETHQRESSTRLSELETQLKLLEQRVVDLSASLNAAEEEKKSLSSMILEITDELKQAQSKVQELVTELAESKDTLTQKENELSSFVEVHEAHKRDSSSQVKELEARVESAEEQVKELNQNLNSSEEEKKILSQQISEMSIKIKRAESTIQELSSESERLKGSHAEKDNELFSLRDIHETHQRELSTQLRGLEAQLESSEHRVLELSESLKAAEEESRTMSTKISETSDELERTQIMVQELTADSSKLKEQLAEKESKLFLLTEKDSKSQVQIKELEATVATLELELESVRARIIDLETEIASKTTVVEQLEAQNREMVARISELEKTMEERGTELSALTQKLEDNDKQSSSSIETLTAEIDGLRAELDSMSVQKEEVEKQMVCKSEEASVKIKRLDDEVNGLRQQVASLDSQRAELEIQLEKKSEEISEYLSQITNLKEEIINKVKVHESILEEINGLSEKIKGRELELETLGKQRSELDEELRTKKEENVQMHDKINVASSEIMALTELINNLKNELDSLQVQKSETEAELEREKQEKSELSNQITDVQKALVEQEAAYNTLEEEHKQINELFKETEATLNKVTVDYKEAQRLLEERGKEVTSRDSTIGVHEETMESLRNELEMKGDEIETLMEKISNIEVKLRLSNQKLRVTEQVLTEKEEAFRKEEAKHLEEQALLEKNLTMTHETYRGMIKEIADKVNITVDGFQSMSEKLTEKQGRYEKTVMEASKILWTATNWVIERNHEKEKMNKEIEKKDEEIKKLGGKVREDEKEKEMMKETLMGLGEEKREAIRQLCVWIDHHRSRCEYLEEVLSKTVVARGQRRVSQRT
Protein: Agamous-like MADS-box protein AGL11 (Agamous like-protein 11) (VvAGL11) (MADS-box protein 5) (VvMADS5) (Protein SEED DEVELOPMENT INHIBITOR) (VvAG3) (VviAG3) (A0A217EJJ0)
Organism: Vitis vinifera (Grape)
Function: Probable transcription factor involved in seed development.
Subcellular location: Nucleus {ECO:0000255|PROSITE-ProRule:PRU00251}.
Interaction partners:
Sequence:
MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRVYEYSNNNIKSTIDRYKKASSDSTNGGSTMEINAQYYQQESAKLRQQIQMLQNSNRHLMGDSLASLTVKELKQLENRLERGITRIRSKKHELLLAEIEYLQKREIELENESVYLRTKIAEVERLQQANMVSTHEFNAIQALVSLNFFQPNMIEGGSAGYPLPDKKVLHLG
Protein: Conserved protein (P71792)
Organism: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Interaction partners:
- GDP-L-fucose synthase
- GDP-mannose 4,6-dehydratase
- Uncharacterized glycosyltransferase Rv1514c
- PGL/p-HBAD biosynthesis glycosyltransferase Rv2958c
Sequence:
MRLARRARNILRRNGIEVSRYFAELDWERNFLRQLQSHRVSAVLDVGANSGQYARGLRGAGFAGRIVSFEPLPGPFAVLQRSASTDPLWECRRCALGDVDGTISINVAGNEGASSSVLPMLKRHQDAFPPANYVGAQRVPIHRLDSVAADVLRPNDIAFLKIDVQGFEKQVIAGGDSTVHDRCVGMQLELSFQPLYEGGMLIREALDLVDSLGFTLSGLQPGFTDPRNGRMLQADGIFFRGSD
Protein: CRM-domain containing factor CFM3A, chloroplastic/mitochondrial (Protein CRM FAMILY MEMBER 3A) (AtCFM3a) (F4J2U9)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Binds specific group II introns in chloroplasts and facilitates their splicing. Acts on subgroup IIB introns. The substrates of the subgroup IIB also require the CRM domain proteins CAF1 or CAF2, with a simultaneous binding of CFM3A and CAF1 or CAF2. Required for seed development. May influence the biogenesis of the mitochondrial small ribosomal subunit.
Subcellular location: Plastid, chloroplast {ECO:0000269|PubMed:18799595}. Mitochondrion {ECO:0000269|PubMed:18799595}.
Interaction partners:
- CRS2-associated factor 2, chloroplastic
- Protein REGULATOR OF FATTY ACID COMPOSITION 3
- At4g39040
- RNA-binding KH domain-containing protein
- Small ribosomal subunit protein bS16cz
Sequence:
MAMKPSLHFCPTTVTKKFVYSFQSSFCFRFLRYSSSISLGSCKGVTFSSRNDQIASRRFSFSRDCNNGVWLENWNRIQKRNQPKPPKVVVNYRKEGRFSGSEIVSGDDNRSRDGDGSTMEKIVEKLKKYGYMEEVQNKEIEQERRIEKGSVEDIFYVEEGKLPNTRGGFTEESLLGGENVIGSNGDVGFPWEKMSAKEKKELEAEWTAKKENRYSLAEMTLPESELRRLRNLTFRTASKMRIRGGGVTQVAVDAIKEKWKSAEIVRLKIEGASALNMRKMHEILEKKTGGLVIWRSGTSISLYRGVSYELPSGKWNKQRREETPPEAVIENHDETTTMVDKSDEKVHLPQLEQETTSVEKKDQTSPVVEYEDELDELLDDLGPRFMDWPGDNPLPVDADLLPGAIPDYEPPFRVLPYGVRSSLGPKEATALRRLARSIPPHFALGRSRQLQGLATAMVRLWEKSMLAKIAIKRGVQSTTSERMAEDLKKLTGGIMLSRNKDFLVFYRGKNFLSREVADALVEQERFVRTLQDEEEQARLRGSSALIVPSTEPANKLVSAGTLGETLDATGKWGKNLDDDDHSDEVKQEVEILRHENLVRKLERKLAFAERKLLKAERGLAKVEVCLKPAEQREDPESITDEERFMFRKLGLKMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVKAKTFDGVKKVALALEAESGGILVSIDKVTKGYAIIVYRGQDYKRPTMLRPKNLLTKRKALARSIELQRREGLLKHISTMQAKAKQLRAEIEQMEKVTDKGDEELYNKLDMAYASSDEETDEEDDDDAFPETYAEGEDGEEGEILAGELSETEDKDLDSNESETGFGDDSVLFAEDLHTKSEDLPNKKVRLQHQS
Protein: Uncharacterized protein YbiB (P30177)
Organism: Escherichia coli (strain K12)
Interaction partners:
- N-glycosidase YbiA
- ATP-dependent DNA helicase DinG
- Bifunctional protein TrpGD
- Tryptophan synthase alpha chain
- Anthranilate synthase component 1
- Aminodeoxychorismate synthase component 1
- Aminodeoxychorismate synthase component 2
Sequence:
MDYRKIIKEIGRGKNHARDLDRDTARGLYAHMLNGEVPDLELGGVLIALRIKGEGEAEMLGFYEAMQNHTIKLTPPAGKPMPIVIPSYNGARKQANLTPLLAILLHKLGFPVVVHGVSEDPTRVLTETIFELMGITPTLHGGQAQAKLDEHQPVFMPVGAFCPPLEKQLAMRWRMGVRNSAHTLAKLATPFAEGEALRLSSVSHPEYIGRVAKFFSDIGGRALLMHGTEGEVYANPQRCPQINLIDREGMRVLYEKQDTAGSELLPQAKDPETTAQWIERCLAGSEPIPESLKIQMACCLVATGEAATISDGLARVNQAF
Protein: Transient receptor potential-gamma protein (TRPgamma) (Transient receptor potential cation channel gamma) (Q9VJJ7)
Organism: Drosophila melanogaster (Fruit fly)
Function: A light-sensitive calcium channel that is required for inositide-mediated Ca(2+) entry in the retina during phospholipase C (PLC)-mediated phototransduction (By similarity). Forms a regulated cation channel when heteromultimerized with trpl.
Subcellular location: Cell projection, rhabdomere membrane {ECO:0000269|PubMed:10896160}; Multi-pass membrane protein {ECO:0000305}.
Interaction partners:
- Inactivation-no-after-potential D protein
- Protein kinase C, brain isozyme
- Transient receptor potential protein
- Protein kinase C, eye isozyme
- Transient-receptor-potential-like protein
- Transient receptor potential cation channel subfamily A member 1
- Inactive
- SD02261p
- Transient receptor potential cation channel trpm
- Transient receptor potential channel pyrexia
Sequence:
MMEEENTIRPHQEIRQLTLEEKKFLLAVERGDMAGTRRMLQKAQDTEYINVNCVDPLGRTALLMAIDNENLEMVELLINYNVDTKDALLHSISEEFVEAVEVLLDHENVTFHSEGNHSWESASEDTSTFTPDITPLILAAHRDNYEIIKILLDRGAVLPMPHDVRCGCDECVQSRQEDSLRHSRSRINAYRALASPSLIALSSKDPILTAFELSWELRRLSFLEHEFKNEYQELRKQCQDFATALLDHTRTSHELEILLNHDPTGPVYEHGERMHLNRLKLAIKLRQKKFVAHSNVQQLLASIWYEGLPGFRRKNMALQAVDIIRIGIMFPIFSLAYILAPYSSIGQTMRKPFIKFICHSASYFTFLFLLMLASQRIETFIGGWFFADSSGMLNTMEELPTKRGAKPTFIEWLILAWVSGLIWSEVKQLWDVGLQEYLNDMWNVIDFVTNSLYVATVALRVVSFFQVQKEMIYNSHATDLPRERWDAWDPMLISEGLFSAANIFSSLKLVYIFSVNPHLGPLQVSLSRMVMDIMKFFFLYVLVLFAFGSGLNQLLWYYADLEKKRCPEVSPMSALLNMNGTNDPNACIVWRRFSNLFETTQTLFWAVFGLIDLDSFELDGIKIFTRFWGMLMFGTYSVINIVVLLNLLIAMMNHSYQLISERADVEWKFARSKLWISYFEEGGTCPPPFNIIPTPKSIWYAIKWMRRVFCSGSSAARREHLKTIRRKAQQASDRDFKYQQIMRNLVRRYVTVEQRKAESQGVTEDDVNEIKQDISAFRCELVEILKNSGMDTNVTAGQGGGGGGKKNRQKERRLMKGFNIAPPGSTGSLAPVAEFSTSLDNYDNQHEILSSTLSTLFTPNFMHKRQQSQAGSGGGGSESPTTPTAPQGTQGAAMTASSQVTKYNKSALKPYNKRIAGHKKRWGTLIEAAKVGNVSKMLGRSKSEDSVCNSSHTSTPVHGQMRVTYAQNSPQQEYGYHGETSSTTISTPTPTISVVSNSPAAHAGVGSHFFHTTSGLTAIAALKRKRKKFSSSKNICPVTESVAAANAAEILNDKTLKRVSSYPAAEAGVQHNPAQLVKPRRHEQTQSQHDSVETNSTFTLSIDPSNTSVNSREPLISTSCVSTTGAIG
Protein: Ubiquitin-like protease 2 (EC 3.4.22.-) (Q23238)
Organism: Caenorhabditis elegans
Function: Protease that catalyzes two essential functions in the smo-1 pathway: processing of full-length smo-1 to their mature forms and deconjugation of smo-1 from targeted proteins (By similarity). May deconjugate smo-1 from the cadherin protein hmr-1 and plays a role in its recruitment to and the maintenance of adherens junctions. Required for epidermal morphogenesis during embryonic development.
Subcellular location: Nucleus {ECO:0000269|PubMed:26412237}. Cytoplasm, cytosol {ECO:0000269|PubMed:26412237}.
Interaction partners:
- Small ubiquitin-related modifier
- Ubiquitin-like protease family profile domain-containing protein
- Sentrin-specific protease
- SUMO-conjugating enzyme UBC9
- SUMO-activating enzyme subunit aos-1
- Ubiquitin-like protease family profile domain-containing protein
- SUMO-activating enzyme subunit uba-2
- E3 SUMO-protein ligase gei-17
Sequence:
MSDSTQMEANAAINEIKKRTRKLDQSLQMRFCADQFFIGNHCTKLASGKSIIISQNSKNRICLRFFMAADPLVGYTGRDFGIAFNQIDHISLKDEQQENPAVLICTLNLSSYTKMCKLQTGLKDVVEKPFLYNKSLARNLTFILKPWNDDPDTFVKISYNDEHREYVHSYDYDVAKSLMFKEVQAVWEQSLKEQLQRRHQTGRVYLTSQLSEMTPREWVQFLADQKLSKIVCHNGSIQYARVEDNPHGRKHTAVATNGFDHRGTRVLNSFGKAHASLATQEKSYAKKRKLTEQSLKLIYRNDRSVWLEGSCAKNLKMPKINSEPNMGEFMGWPDMDNAMTHPTSNFENEDVMKSTKQPNDFVSFEQLQAPPPVLQRQNGAIYSTQSVAFTHISGNDGVEDLTEKISHLGEEAYNIDMANALHAFSDNWHYEIHPNTVHNASFEQLHIGDGNSSIGTIGFNPLEPYPQSSFPQSNNWQQAHGDFTFPQVSFPNTQQGSCLPSTPTAALPPTRPVVEKIPPDTQLFTFPPSGSCTTGMDPVVLLVKDIKTLDRKEFLNDSVMAFMLNYIAFMLSSELMKSVHMCNTFLFVNLTRLLPPLCFSKRRPIEPEHIKIVKDNCPRVLRWTRKFDVLAKDYIIIPINEDLHWLVIAVINPSGAIVDMSNEEASRAAPKCYIVFFDPLSGLDPSKKNHMCHCIKIYLAQLYENTKAPGMKFASKNPTIYDEERVVVTRAENTPIQDNFYDCGLYVLHFIEGLFCYPNRPVNVNDFPNFDWSKFFPEANKMCDLMRDKVYNLILQQADKPARSRLAKFERENKCGLSREGALRKARRHSAVNERRTKRHRDYYARHYSLSPPHRNVMNDDPTFMNPRGLAEMPITRLVRRLRIPEDNFPIAY