wanglab/gogpt-training-data huggingface dataset:
Protein: AT-rich interaction domain 1B (F1LNP1)
Organism: Rattus norvegicus (Rat)
Subcellular location: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
Interaction partners:
- SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 4
- AT-rich interaction domain 1A
- SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
- SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2
- Double PHD fingers 2
- SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
- SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1
- Protein polybromo-1
- SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1
- SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1
Sequence:
MGPGCEGPGSPMDPMVMKRPQLYGMGTHPHSQPQQSSPYPGGAYGPPGAQRYPLGMQGRAPGALGGLQYPQQQMPPQYGQQGVSGYCQQGQQPYYNQQPQPSHLPPQAQYLQPQSQQRYQPQQDMSQEGYGTRAQPPLAPGKSNHEDLNLIQQERPSSLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQSNPAQSPFSPHASPHLSSIPGGPSPSPVGSPVGSNQSRSGPISPASIPGFMAGTQRNPQMSQYGPQQTGPSMSPHPSPGGQMHPGISNFQQSNSSGTYGPQMSQYGPQGNYSRTPTYSGVPSASYSGPGPGMGINANNQMHGQGPTQPCGAMPLGRMPSAGMQSRPFPGNMSSVPPSSPGMSQQGGPGMGPPMPTVNRKAQEAAAAVMQAAANSAQSRQGSFPGMNQSGLVASSSPYSQPMNNNSNLMGTQAQPYSMTPTMVNSSTASMGLTDMMSPSESKLSVPLKADGKEEGVPQPESKSKDSYSSQGISQPPTPGNLPVPSPMSPSSASISSFHGDESDSISSPGWPKTPSSPKSSSSSTTGEKITKVYELGTEPERKLWVDRYLTFMEERGSPVSSLPAVGKKPLDLFRLYVCVKEIGGLAQVNKNKKWRELATNLNVGTSSSAASSLKKQYIQYLFAFECKIERGEEPPPEVFSTGDAKKQPKLQPPSPANSGSLQGPQTPQSTGSSSMAEVPGDLKPPTPASTPHGQGTPMQSGRSSTVSVHDPFSDVSDSAYPKRNSMTPNAPYQQGMGMPDMMGRMPYEPNKDPFSGMRKVPGSSEPFMTQGQMPNSSMQDMYNQSPSGAMSNLGMGQRQQFPYGTSYDRRHEAYGQQYPGQGPPTGQPPYGGHQPGLYPQQPNYKRHMDGMYGPPAKRHEGDMYNMQYGSQQQEMYNQYGGSYSGPDRRPIQGQYPYPYNRERMQGPGQMQPHGIPPQMMGGPMQSSSNEGPQQNMWATRNDMPYPYQNRQGPGGPAQAPPYPGMNRTDDMMVPDQRINHESQWPSHVSQRQPYMSSSASMQPITRPPQSSYQTPPSLPNHISRAPSPASFPRSLESRMSPSKSPFLPAMKMQKVMPTVPTSQVTGPPPQPPPIRREITFPPGSVEASQPVLKQRRKITSKDIVTPEAWRVMMSLKSGLLAESTWALDTINILLYDDSTVATFNLSQLSGFLELLVEYFRKCLIDIFGILMEYEVGDPSQRALDHRTGKKDDSQSSEDDSGKEEDDAECLEEEEEEEEEEEEEEEEEEEEEEDSKKTESEGKSSSALAAPDTTADPKETPRQASKFDKLPIKIVKKNNLFVVDRSDRLGRVQEFNSGLLHWQLGGGDTTEHILTHFESKMEIPPRRRPPAPLSSTGKKKELAGKGDSEEQPEKSIIATIDDVLSARPGALPEDSNPGPQTESGKFPFGIQQAKSHRNIRLLEDEPRSRDETPLCTIAHWQDSLAKRCICVSNIVRSLSFVPGNDAEMSKHPGLVLILGKLILLHHEHPERKRAPQTYEKEEDEDKGVACSKDEWWWDCLEVLRDNTLVTLANISGQLDLSAYTESICLPILDGLLHWMVCPSAEAQDPFPTVGPNSVLSPQRLVLETLCKLSIQDNNVDLILATPPFSRQEKFYATLVRYVGDRKNPVCREMSMALLSNLAQGDTLAARAIAVQKGSIGNLIGFLEDGVTMAQYQQSQHTLMHMQPPPLEPPSVDMMCRAAKALLAMARVDENRSEFLLHEGRLLDISISAVLNSLVASVICDVLFQIGQL
Protein: Small nuclear ribonucleoprotein SmD3, putative (Q580B7)
Organism: Trypanosoma brucei brucei (strain 927/4 GUTat10.1)
Subcellular location: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
Interaction partners:
- Sm protein G
- Small nuclear ribonucleoprotein E
- Sm protein F
- Small nuclear ribonucleoprotein Sm D2
- Small nuclear ribonucleoprotein SmD1
- Sm protein B
- U2 small nuclear ribonucleoprotein B, putative
- PRP8 protein homologue
- U5 small nuclear ribonucleoprotein component, putative
- U1 small nuclear ribonucleoprotein, putative
Sequence:
MNTEGLPLKVLSDAVGTTVSLELKNGELYTGTLSEVVDNMGVLLTSARKTTMAGREVDMPKVLVCGTNIVFFQLPDALRCCPPLMKMGKLLPSDLDGRGDGKGFGAHRSRKKPKK
Protein: DNA polymerase delta catalytic subunit (PfPoldelta) (EC 2.7.7.7) (3'-5' exodeoxyribonuclease) (EC 3.1.11.-) (P30315)
Organism: Plasmodium falciparum (isolate K1 / Thailand)
Function: This polymerase possesses two enzymatic activities: DNA synthesis (polymerase) and an exonucleolytic activity that degrades single-stranded DNA in the 3'- to 5'-direction.
Subcellular location: Nucleus {ECO:0000250|UniProtKB:P15436}.
Interaction partners:
Sequence:
MEELKTCPFTNVIPYGLLYDKLKKEKNNDVPENYVIEEFDKLLKNYERPNVYDEIGNATFKNDEDLITFQIDLDYTVENIFKNMIYNESGSNNSILNDIYMPYRILLSKDKNYVSVPIIRIYSLRKDGCSVLINVHNFFPYFYVEKPDDFDNEDLIKLEMLMNENLNLNSQYKIYEKKILKIEIVKTESLMYFKKNGKKDFLKITVLLPKMVPSLKKYFEGIVHVNNKSIGGIVYEANLPFILRYIIDHKITGSSWINCKKGHYYIRNKNKKISNCTFEIDISYEHVEPITLENEYQQIPKLRILSFDIECIKLDGKGFPEAKNDPIIQISSILYFQGEPIDNCTKFIFTLLECASIPGSNVIWFNDEKTLLEAWNEFIIRIDPDFLTGYNIINFDLPYILNRGTALNLKKLKFLGRIKNVASTVKDSSFSSKQFGTHETKEINIFGRIQFDVYDLIKRDYKLKSYTLNYVSFEFLKEQKEDVHYSIMNDLQNESPESRKRIATYCIKDGVLPLRLIDKLLFIYNYVEMARVTGTPFVYLLTRGQQIKVTSQLYRKCKELNYVIPSTYMKVNTNEKYEGATVLEPIKGYYIEPISTLDFASLYPSIMIAHNLCYSTLIKSNHEVSDLQNDDITTIQGKNNLKFVKKNVKKGILPLIVEELIEARKKVKLLIKNEKNNITKMVLNGRQLALKISANSVYGYTGASSGGQLPCLEVAVSITTLGRSMIEKTKERVESFYCKSNGYEHNSTVIYGDTDSVMVKFGTNNIEEAMTLGKDAAERISKEFLSPIKLEFEKVYCPYLLLNKKRYAGLLYTNPNKHDKMDCKGIETVRRDFCILIQQMMETVLNKLLIEKNLNSAIEYTKSKIKELLTNNIDMSLLVVTKSLGKTDYETRLPHVELAKKLKQRDSATAPNVGDRVSYIIVKGVKGQAQYERAEDPLYVLDNNLAIDYNHYLDAIKSPLSRIFEVIMQNSDSLFSGDHTRHKTILTSSQTALSKFLKKSVRCIGCNSSIKKPPLCNHCKENKEFSIYMQKIKDFKNKQNEFFQLWTECQRCQGNLHVDVICMNRDCPIFYRRAKIKKDIANLQEQVTSLRMDW
Protein: Anaphase-promoting complex subunit 13 (Protein BONSAI) (Q8L981)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin ligase that controls progression through mitosis and the G1 phase of the cell cycle. The APC/C complex acts by mediating ubiquitination and subsequent degradation of target proteins (By similarity). Regulates global growth and development, including phyllotaxis and apical dominance. Required for pollen maturation. Promotes (pri) miRNA transcription of each MIR159 genes.
Subcellular location: Nucleus {ECO:0000250|UniProtKB:Q9BS18}.
Interaction partners:
- Anaphase-promoting complex subunit 8
- Cell division cycle protein 27 homolog A
- Anaphase-promoting complex subunit 6
- Anaphase-promoting complex subunit 4
- Cell division cycle protein 27 homolog B
- Anaphase-promoting complex subunit 10
- Lysine-specific demethylase JMJ25
- Anaphase-promoting complex subunit 11
- Anaphase-promoting complex subunit 5
- Cell division cycle 20.1, cofactor of APC complex
Sequence:
MAEVSLGMLIDIVDEEWMRDTLPDDDLPLPPVLAVKTDDTEETNQETQQADAETWRDLALDTQ
Protein: tRNA pseudouridine synthase A (EC 5.4.99.12) (tRNA pseudouridine(38-40) synthase) (tRNA pseudouridylate synthase I) (tRNA-uridine isomerase I) (P9WHP9)
Organism: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Function: Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.
Interaction partners:
- DNA-directed RNA polymerase subunit alpha
- Large ribosomal subunit protein bL17
- tRNA pseudouridine synthase B
- Small ribosomal subunit protein uS4
- Small ribosomal subunit protein uS11
- Small ribosomal subunit protein uS13
- Translation initiation factor IF-1
Sequence:
MSLTRRPPKSPPQRPPRISGVVRLRLDIAYDGTDFAGWAAQVGQRTVAGDLDAALTTIFRTPVRLRAAGRTDAGVHASGQVAHVDVPADALPNAYPRAGHVGDPEFLPLLRRLGRFLPADVRILDITRAPAGFDARFSALRRHYVYRLSTAPYGVEPQQARYITAWPRELDLDAMTAASRDLMGLHDFAAFCRHREGATTIRDLQRLDWSRAGTLVTAHVTADAFCWSMVRSLVGALLAVGEHRRATTWCRELLTATGRSSDFAVAPAHGLTLIQVDYPPDDQLASRNLVTRDVRSG
Protein: PLAT domain-containing protein 2 (AtPLAT2) (PLAT domain protein 2) (Q9SIE7)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Involved in response to abiotic stress.
Subcellular location: Endoplasmic reticulum {ECO:0000250|UniProtKB:O65660}.
Interaction partners:
- Putative defensin-like protein 126
- Defensin-like protein 127
Sequence:
MMPRRDVLFLSLLLVIATVSAVALADDEADCVYTFFLRTGSTFKAGTDSIISARVYDKYGDYIGIRNLEAWGGLMGPGYNYYERGNLDIFSGKAPCLPSPVCSLNLTSDGSGDHHGWYVNYVEVTTAGVHAKCSYQSFDVEQWLASDTSPYELSAVRNNCPVSLRESVGRVGSEIRKTLSWIV
Protein: CUB domain-containing protein (C0Z3M3)
Organism: Caenorhabditis elegans
Interaction partners:
Sequence:
MHLIYLFLLSIFVSKADGNSRKTIFQCDQHFDESQPEGVIEFPSLPKQLALSHGVNNSKPEQQYNLQCVYTFVAGSRQRVRLEFDHFLLSGSSENCDIEYVDIYSEVESVDEDILSSALGGRYCGTVAPHVRISLRRVMKLVLHSRSTNHEDNHGFRAKYSFIPEDKFIAGEPVGGKKCSFIIDSSDRKIGTLYSPTYPGTYPHNMHCSYLMKAGRGERIRLFFTDFDIFFGGEHCPYDSVTIFDGPTPASPIIRKVCGLQQRMEVYSMGNSLLIHFNTTHPAKSDPRGFIMDYEFSTRFVNIDKLLNKQRGVTHIRGTECDVRVESNRETFHTISSPNSIQPTPPAPTSFMDFRESRTWRRLYLPLIL
Protein: Large ribosomal subunit protein bL36c (50S ribosomal protein L36, chloroplastic) (P62727)
Organism: Oryza sativa subsp. japonica (Rice)
Subcellular location: Plastid, chloroplast.
Interaction partners:
- Small ribosomal subunit protein uS14c
- Large ribosomal subunit protein bL33c
- 50S ribosomal protein L31
- Large ribosomal subunit protein bL27c
- Os01g0220300 protein
- Elongation factor Tu
- Elongation factor Tu
- Small ribosomal subunit protein uS2c
- Os06g0683200 protein
- Large ribosomal subunit protein bL28m
Sequence:
MKIRASVRKICTKCRLIRRRGRIRVICSNPKHKQRQG
Protein: Chlorophyll a-b binding protein, chloroplastic (Q39141)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Subcellular location: Plastid, chloroplast thylakoid membrane {ECO:0000256|ARBA:ARBA00004334, ECO:0000256|RuleBase:RU363080}.
Interaction partners:
- Chlorophyll a-b binding protein CP26, chloroplastic
- Photosystem I reaction center subunit II-1, chloroplastic
- Chlorophyll a-b binding protein 4, chloroplastic
- Photosystem I reaction center subunit psaK, chloroplastic
- Chlorophyll a-b binding protein 1, chloroplastic
- Chlorophyll a-b binding protein 2, chloroplastic
- Photosystem I chlorophyll a/b-binding protein 3-1, chloroplastic
- Oxygen-evolving enhancer protein 2-1, chloroplastic
- Chlorophyll a-b binding protein
- Protein phosphatase 2C 57
Sequence:
MASSTMALSSPAFAGKAVKPAASDVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGDGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK
Protein: DegV domain-containing protein SP_1112 (Q97QT7)
Organism: Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)
Function: May bind long-chain fatty acids, such as palmitate, and may play a role in lipid transport or fatty acid metabolism.
Interaction partners:
Sequence:
MTKIKIVTDSSVTIEPELVKQLDITIVPLSVMIDNVVYSDADLKEEGKFLQLMQESKNLPKTSQPPVGVFAEIFEDLCKDGGQILAIHMSHALSGTVEAARQGASLSTADVTVVDSSFTDQALKFQVVEAAKLAQEGKDMEAILSHVEEVKNHTELYIGVSTLENLVKGGRISRVTGLLSSLLNIRAVMQMKDHELQPMVKGRGTKTFKKWLDELITSLSERAVAEIGISYSGSDDWAKEMKESLQAYVEKPISVLETGSIIQTHTGENAWAILIRYHS
Protein: Minor fimbrium tip subunit MfA4 (Immunoreactive 32 kDa antigen) (B2RHG4)
Organism: Porphyromonas gingivalis (strain ATCC 33277 / DSM 20709 / CIP 103683 / JCM 12257 / NCTC 11834 / 2561)
Function: Tip subunit of the minor fimbriae. These filamentous pili are attached to the cell surface; they mediate biofilm formation, adhesion onto host cells and onto other bacteria that are part of the oral microbiome. They play an important role in invasion of periodontal tissues and are recognized as major virulence factors (Probable).
Subcellular location: Fimbrium {ECO:0000269|PubMed:19589838, ECO:0000269|PubMed:24118823, ECO:0000269|PubMed:26001707, ECO:0000269|PubMed:26437277, ECO:0000269|PubMed:26972441}. Cell outer membrane {ECO:0000269|PubMed:26437277}. Note=Targeted to the outer membrane as a palmitoylated precursor. The lipid modification is no longer present after proteolytic processing to the mature form. {ECO:0000305|PubMed:26437277, ECO:0000305|PubMed:26972441}.
Interaction partners:
Sequence:
MKKYLLYASLLTSVLLFSCSKNNPSEPVEDRSIEISIRVDDFTKTGETVRYERNQGSAAERLITNLYLLLFDQSGANPAKYYIAGNTFSGGIWLPDDMKVKLDMTQSEAGERKVYVVANVDNAVKTALDAVANESDLQTVKRTTAMPWSTDIASPFLMSGNKTHDFLANRLLDNVPLVRAIAKVELNISLSEKFQIVPIIVNGSLSEFKFRYVNFDKETYVVKPTTKPDNLISSANGVWPQITDWTVWGASLNTSPAPDAGTGYTLDANGKVTALRIVTYLNERDSKGATVEVALPRVDDGTLPPPEFGPELYRLPLPDKILRNHWYKYEVEI
Protein: Mitochondrial phosphate carrier protein 2, mitochondrial (Mitochondrial phosphate transporter 2) (MPT2) (Phosphate transporter 3;2) (Q9M2Z8)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Transport of phosphate groups from the cytosol to the mitochondrial matrix. Mediates salt stress tolerance through an ATP-dependent pathway and via modulation of the gibberellin metabolism.
Subcellular location: Mitochondrion inner membrane {ECO:0000250}; Multi-pass membrane protein {ECO:0000250}.
Interaction partners:
- ADP,ATP carrier protein 3, mitochondrial
- ADP,ATP carrier protein 2, mitochondrial
- ADP,ATP carrier protein 1, mitochondrial
- Probable ADP,ATP carrier protein At5g56450
- Amino acid transporter AVT1E
- Ras-related protein RABB1a
- Mitochondrial dicarboxylate/tricarboxylate transporter DTC
- Probable inorganic phosphate transporter 1-3
- Probable anion transporter 4, chloroplastic
- Probable anion transporter 6, chloroplastic
Sequence:
MSDSSRSLIPSFLYSSDHRLFQATTMSTHLKSQPLISPTNSSVSSNGTSFAIATPNEKVEMYSPAYFAACTVAGMLSCGITHTAITPLDVIKCNMQIDPLKYKNITSAFKTTIKEQGLKGFTRGWSPTLLGYSAQGAFKYGLYEYAKKYYSDIVGPEYAAKYKTLIYLAGSASAEIVADVALCPMEAVKVRVQTQPGFARGLSDGLPKIIKSEGFRGLHKGLVPLWGRQIPYTMMKFATFENTVELIYKKVMPTPKEECSKPVQLGVSFAGGYIAGIFCAIISHPADNLVSFLNNSKGATVADAVKRLGLWGMLTRGLPLRIFMIGTLTGAQWVIYDAVKVLAGLPTTGGASPATALAPSVSA
Protein: non-specific serine/threonine protein kinase (EC 2.7.11.1) (Q8GY50)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Subcellular location: Membrane {ECO:0000256|ARBA:ARBA00004370}.
Interaction partners:
Sequence:
MVGSNTVTATSRLLLICFAYSFTVFSMISSVTDPRDAAALRSLMDQWDNTPPSWGGSDDPCGTPWEGVSCNNSRITALGLSTMGLKGRLSGDIGELAELRSLDLSFNRGLTGSLTSRLGDLQKLNILILAGCGFTGTIPNELGYLKDLSFLALNSNNFTGKIPASLGNLTKVYWLDLADNQLTGPIPISSGSSPGLDLLLKAKHFHFNKNQLSGTIPPKLFSSEMILIHVLFDGNRFTGSIPSTLGLIQTLEVLRLDRNTLTGKVPENLSNLTNIIELNLAHNKLVGSLPDLSDMKSMNYVDLSNNSFDPSESPLWFSTLPSLTTLVMEYGSLQGPLPNKLFGFPQLQQVRLKKNAFNGTLSLGDTVGPELQLVDLQDNDISSVTLSSGYTNTLILEGNPVCTTALSNTNYCQIQQQQVKRIYSTSLANCGGKSCPLDQKVSPQSCECAYPYEGTLYFRGPMFRDLSNVNTYHSLEMSLWVKLGLTPGSVSLQNPFFNNDDYLQIQLALFPPMGKYFNRTEVQRIGFDLSNQTYKPPPLFGPYYFIASPYTFPADGNGHSLSSRMVTGIITGCSALVLCLVALGIYAMWQKRRAEQAIGLSRPFVSWASSGKDSGGAPQLKGARWFSYEELKKITNNFSVSSELGYGGYGKVYKGMLQDGHMVAIKRAQQGSTQGGLEFKTEIELLSRVHHKNLVGLVGFCFEQGEQILVYEYMSNGSLKDSLTGRSGITLDWKRRLRVALGSARGLAYLHELADPPIIHRDVKSTNILLDENLTAKVADFGLSKLVSDCTKGHVSTQVKGTLGYLDPEYYTTQKLTEKSDVYSFGVVMMELITAKQPIEKGKYIVREIKLVMNKSDDDFYGLRDKMDRSLRDVGTLPELGRYMELALKCVDETADERPTMSEVVKEIEIIIQNSGASSSSSASASSSATDFGEKLLYGGTLKKKEARDGDGGGAFDYSGGYSVPTKIEPK
Protein: HDC01001 (Seminal fluid protein 26Ad, isoform A) (Seminal fluid protein 26Ad, isoform B) (Q6IHT7)
Organism: Drosophila melanogaster (Fruit fly)
Interaction partners:
- GEO13384p1
- SCP domain-containing protein
- Uncharacterized protein, isoform E
- IP08087p
- Uncharacterized protein
- Seminal fluid protein
- FI16633p1
- Seminal fluid protein 24Bb
- Prolyl 4-hydroxylase alpha subunit domain-containing protein
- procollagen-proline 4-dioxygenase
Sequence:
MASLKWLAILQLLIIFGALGHAEVDEITDVVKEKLYEAISKTGSTIKSGSASLQSLDDAVRNVIKMKKGAAKSLLDLVSNRILKPEKDAPASLSSCGEGELVCEIKGVLAAESTQQPNTIT
Protein: F-box protein At5g49610 (Q9FGY4)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Interaction partners:
- F-box protein At5g39250
- Putative F-box protein At4g38870
- F-box/LRR-repeat protein At2g42720
- Putative FBD-associated F-box protein At1g78730
- F-box/kelch-repeat protein At3g16740
- Putative F-box protein At3g23260
- FBD-associated F-box protein At5g56370
- F-box/kelch-repeat protein At5g43190
- F-box/kelch-repeat protein At3g24760
- Integral membrane HRF1 family protein
Sequence:
MDNQKGALFPDEVILQILARLPVKSLFRFKSVCKSWYRLPSDKYFTSLFNQLSVKEQLLVAEVSDSSSLICVDNLRGVSELSLDFVRDRVRIRVSSNGLLCCSSIPEKGVYYVCNPSTREYRKLPKSRERPVTRFYPDGEATLVGLACDLSKNKFNVVLAGYHRSFGQRPDGSFICLVFDSESNKWRKFVSVLEECSFTHMSKNQVVFVNGMLHWLMSGLCYILALDVEHDVWRKISLPDEIRIGNGGGNRVYLLESDGFLSVIQLSDVWMKIWKMSEYETETWSVVDSISLRCIKGLVPGIFPICQTGEYVFLATHKQVLVYQRRSKLWKEMFSVKGSSSLPLWFSAHAFRSTIVPCN
Protein: DNA polymerase III subunit delta' (EC 2.7.7.7) (O06363)
Organism: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Interaction partners:
- Probable DNA polymerase III subunit delta
- Beta sliding clamp
- DNA polymerase III subunit alpha
- Putative bifunctional exonuclease/endonuclease protein Rv2191
- Probable DNA polymerase III
- DNA polymerase III subunit gamma/tau
- Single-stranded DNA-binding protein
- Single-stranded DNA-binding protein
- Error-prone DNA polymerase
- Putative lipoprotein LppK
Sequence:
MSGVFTRLVGQQAVEAELLATAKAARRDSAHSAGGGGTMTHAWLLTGPPGSGRSVAALCFAAALQCTSGGEPGCGRCRACTTTLAGTHADVRRVIPEGLSIGVDEMRAIVQIAARRPTTGHWQIVVIEDADRLTEGAANALLKVVEEPPPSTVFLLCAPSVDPEDIAVTLRSRCRHVALVTPSTHAIAQVLSDGDGLDPDTANWAASVSGGHVGRARRLATDPQARQRRERALGLARDAATPSRAYAAAEELVAGAEAEALALTAQRIEAETEELRTALGAGGTGKGTGAALRGATGAMKDLERRQKSRQTRASRDALDRALIDLATYFRDALLVAAHAGGVRANHPDMADRVAALAAHAPPERLLRCIEAVLACREALAVNVKPKFAVDAMVATIGQELR
Protein: Activating transcription factor 7-interacting protein 1 (ATFa-associated modulator) (mAM) (MBD1-containing chromatin-associated factor 1) (Q7TT18)
Organism: Mus musculus (Mouse)
Function: Recruiter that couples transcriptional factors to general transcription apparatus and thereby modulates transcription regulation and chromatin formation. Can both act as an activator or a repressor depending on the context. Required for HUSH-mediated heterochromatin formation and gene silencing (By similarity). Mediates MBD1-dependent transcriptional repression, probably by recruiting complexes containing SETDB1. Stabilizes SETDB1, is required to stimulate histone methyltransferase activity of SETDB1 and facilitates the conversion of dimethylated to trimethylated H3 'Lys-9' (H3K9me3). The complex formed with MBD1 and SETDB1 represses transcription and couples DNA methylation and histone H3 'Lys-9' trimethylation (H3K9me3). Facilitates telomerase TERT and TERC gene expression by SP1 in cancer cells (By similarity).
Subcellular location: Nucleus {ECO:0000269|PubMed:10777215}.
Interaction partners:
- Histone-lysine N-methyltransferase SETDB1
- ARL14 effector protein
- M-phase phosphoprotein 8
- Histone-lysine N-methyltransferase SETDB2
Sequence:
MDSVEEPQKKVFKARKTMRASDRQQLDAVHRVKGELLRADGKLLNGSHENGDLDPTSPLENTDCIQDREEVNGIDGICFQSEESTTEWKETPCMPNVAVKNKQEDLNSEALSPSITCDLSSRVTTEPGSGSPASDNPGCGTPVSDNPASDNPASDNPASDNPDSGDLAAGELATTVQATGDSACEEPPSSDPSSSDPTSSEPSSSEPTCSEPISGDPVSEEAASHDLVSGDSTCSEPVSGEPVSHEAASSEPATSEPASDEPVARVVAACELAPGESALDDCAPSGDSQSDEPPSSEDSLPRSVCSGLASGELTPGELSVEPATDTVKPSSSAVCEAGPDPDKTEPSSNNSDDCPGKSEDDEHLDQIQSKDSCDEGNKVNSNVVEKEEPLETHSAIICSDLPPENTTKIAEDPIAEPALEEEAISSSMEVDQSEKDEHKSPAEPVAAVSEDPAEEDKEDTVVDNTDSMETDEIIPILEKLAPTEDELSCFSKASLLPVETSQDLEDKMEGSFGSPSKQESSENLPKEAFLVLSDEEDLSCGKDESEAVAQSKMSTPEGEKSEKDGKAEEEERVPAEEQPPVRNEFSRRKRSKSEDMDSVESKRRRYMDEEYEAEFQVKITAKGDINQKLQKVIQWLLQEKLCALQCAVFDKTLAELKTRVEKIECNKRHKAVLTELQAKIARLTKRFGAAKDDLKKRQESPPNPPISPGKPANDTNSNNNMTYRNAGTVRQLLESKRNVSEGPPPSFQTPVNTVSSASHATSTAVVSSQPKLQTSATSGSLPAAPLLPAPSTATVVATTQVPSGTPQPTISLQPLPVILHVPVAVTSQPQLLQSHPGTLVTNQPSGNVEFISVQSQPTVSGLTKNPVSLPPLPNPTKPNIPSVPSPSSIQRNSSTTAAPLGTTLAVQAVPTAHSIVQATRTSLPTVGPSGLYSSSSSRGPIQMKIPISTFSPPSSAEQNSSATPRIVTENQTNKTVDSSINKKAADSTSQSGKASSSDSSGVIDLTMDDEESGTTQDPKKISPPSSSTVSTSQPMSRPLQPILPAPPLQPSGVPTSGPSQATIHVLPTAPTTVNVTHRPVTQVTTRLPVPRAPANHQVVYTTLPAPTTQAPLRGTVMQAPAVRQVNPQNSVTVRVPQTTTYVVNNGLTLGSAGPQLTVHHRPPQVHNEPPRPLHPAPLPEAPQPQRLPPEAASTSLPQKPHLKLARVQSQNGIVLSWSVLEVDRSCATVDSYHLYAYHEEPSATVPSQWKKIGEVKALPLPMACTLTQFVSGSKYYFAVRAKDIYGRFGPFCDPQSTDVISSSQNS
Protein: Discontinuous actin hexagon (LD05408p) (Q24175)
Organism: Drosophila melanogaster (Fruit fly)
Interaction partners:
- Nuclear fallout, isoform J
- Dystrobrevin, isoform F
- Cell division control protein
- IP02644p
Sequence:
MLRSSVPVQLTKLRNSAEAVASIAREKGSQGGQGQKQQVDKELSTIMDDLQRDYGNYKYTVYRCASKFVALQKIFHTGKIPYKLVLAILDRHNLSGGLELMVPPFQLTSLLHDVYFACEKLGHFNQDANYKLDRATGLLANFFWNVYDPQRRHSISLLEIRITFILLCKLYSSDHLVGDIFGLLADPKSQIISRYAFEQLLATLSKLLSYLGEAKAYGVHNLPLAMEQCFARCPHGVGGLTEPQFHKLWTGAGVQTRFLIYGNLLALVKRIEDTEHLIHSNSCAGCRKEHIVGIRFRCQVCRDISLCLPCFAVGFAGGRHEPGHRMCEVFVEDQPPLRWTRHLARLCGWLVMPRKTQEEERRGFCNAQESGPALGQSAATPIPAETRSVRSQCQEKDRTVVLQQQQQELCSLTGLASEASSRLQSIIDRLLLQNAKLETQLQTVATASSSEISQFLSAHQCFLLQIIEDMRQLSHASAVTSPPPAPAAQVAPSAAPLVSSTFLSSSTPQRQMLFDMYAPVGANLTHSINGADLNRSYLEANKSDYSLNDISLWFDQRRSSVQPGQGPGSLPAPLPLPMPLGALLEQQPANGGDGRDTEMVNFKLLLHKVKEIVEDSYSDNAELSAATQNLENVLDSIIKSEEQQRRIST
Protein: Olfactory receptor (Q7TQV3)
Organism: Mus musculus (Mouse)
Subcellular location: Cell membrane {ECO:0000256|ARBA:ARBA00004651, ECO:0000256|RuleBase:RU363047}; Multi-pass membrane protein {ECO:0000256|ARBA:ARBA00004651, ECO:0000256|RuleBase:RU363047}.
Interaction partners:
Sequence:
MGPGTLNDSGTTEFLLLGLWAPPSLRPLLWASLLLAYLTTVLGNGALVGLIALDRRLHRPMYRLLTHLALLDTAYVSTTLPQALAHMTMRSARLSLVRCGTQLYVGISLGSCEAILLAAMALDRCLAVCRPLHYATLVTAPRCAALAGASWTLGFALSVPNAVAALRLPFCPGRAAVDHFFCELPAVLRTACADTTANYRLVYGLGVPILLVPLVLILASYTWILAAVRKLPSAGSRHKALSTCSSHLAVVGLFYGTVSAMYLRPKASSDLPARHHKLVAVFYLVVTPVLNPLIYSLRNREVHMAARYALARLRGTRIVLH
Protein: Protein LONGIFOLIA 2 (Protein TON1 RECRUITING MOTIF 1) (Q9S823)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: In association with LNG1, regulates leaf morphology by promoting longitudinal polar cell elongation independently of ROT3. Associates with microtubules and recruits TON1A and TON1B to the cytoskeleton through its C-terminus.
Subcellular location: Cytoplasm, cytoskeleton {ECO:0000269|PubMed:22286137}. Note=Localizes to cortical microtubules arrays.
Interaction partners:
- At5g26910
- GPI-anchored adhesin-like protein
- tRNA
- tRNA
- GPI-anchored adhesin-like protein, putative
- Serine-rich adhesin for platelets-like protein
- tRNA
- Ribosome biogenesis protein NSA2 homolog
- Vacuolar protein sorting-associated protein 53 B
- Protein TONNEAU 1b
Sequence:
MSAKLLYNLSDENPNLNKQFGCMNGIFQVFYRQHCPATPVTVSGGAEKSLPPGERRGSVGETNMESDKETERSSTKKKKSAAKEKHRVSFESSSRPSFSSSPRSSSFSSAEVSTTASQFDQPGENLIREQPNGGLMMPYDLKELVKGSINREIRTRGEEASFTQQQQPISARSSMLLLKESSLRSPCRSSNEWNEGRGAAMKFKESHRLSYDEREMRNNGFRVGSKLKETPRLSLDSRSNSFRSPRADAARSSCPEEPATMTHRRSSSSVVAKLMGLEVIADNSDTEQRRENRFCDSPRPMSRVEPTALQRSRSVDSIKRIPASAASKFPMEPAPWKQMKAGDSALTVYGEIQKRLTQLEFKKSGKDLRALKQILEAMEKTQQLIDESRDDGTLSTTTLMQRTHKPVSAATSPARNFKSSSIVVMKSAAPVSTSPLPQNVTLPNVKVGNSRQTRKVTSGKQNAMDLTPRPGLYKGQLDSTKSNSPKTVRSRQALAADAGSMTKSGRSQQHSVSPRTQPKKLGFEKQTRPTTPKSEPGKRQLGRQQTEVASPRRKQMIKPHSTLQQPDDRLSDARSDLRSLRSDSNISLGSNVDIEVTSRHRLERNCDFPEQHTPKQRSPDFGIKQDRPSLKPLKVTVEQPSPVSVLDAVFDEEDSPSPVRKISLSFKEEDALRSEESEWINKPTSFCRSVPFPQSNRGPMKPSSDHFECSPEEGADFKSGNHKYILEILLASGILRDLEYSMISFQLHQTRLPINPGLFFILEQNKASNVTLPDNKHRGRGFRQQQTNPTETIRRKLVFDTVNEILARKFTAEGCIKPRLIANPLKKLEKISKEEQLLQTLCSEIDRLQQNNSNCILEDDEEDIIWEDLQSQSMNLKEFEGETPGIVLDIERMIFRDLVNEVCFC
Protein: Major facilitator superfamily multidrug transporter NAG3 (Multidrug resistance protein 97) (N-acetylglucosamine utilization protein 3) (Transmembrane protein 1) (A0A1D8PQG0)
Organism: Candida albicans (strain SC5314 / ATCC MYA-2876) (Yeast)
Function: MFS transporter involved in N-acetylglucosamine (GlcNAc) uptake. Confers resistance to cycloheximide, 4-nitroquinoline-N-oxide, and 1,10-phenanthroline, and contributes to virulence.
Subcellular location: Cell membrane {ECO:0000305}; Multi-pass membrane protein {ECO:0000255}.
Interaction partners:
Sequence:
MSDNTTLDNISVNSEKVVDYTIHHDDRKELERLVSHNKGVEKIVSELAEGAGQLGPLEQPYDIHKVETHPDPHTDYNDADPWKYPIDKETKLRLVDWTEGDKHNPKNFGKGFKWLCTVLLGMICFVVALGSAIVTGDLERPAADFGVSEEVIILASVTMFVIGFGVGPLVFAPMSEEVGRKPIYVVTLFVAVVFIVPCGAAQNIATLLICRLIDGTAFSAPMTLIGGSLADIWEGPERGTAMAVFSAAPFLGPVCGPIFGGLLCDYAPTWRWVYWTFLIVAGFFYVVFIVVVPETHHGILLKKRAKKLRKDTGDSRYRSFNELQIRTFAQVAKTSLLRPFVLLSELIVFLVTMYMSVLYGLLYMFFFAYPIVYQEGKGWSASKTGVMFIPIGVGVIASSLAAPFFNKDYNRRAQEYRDRGELPPAELRLIPMMIGCWFVPAGLFAFAWSSYQRLSWAGPCFSGFAVGFGFLLLYNPANNYIVDSYQHYAASALAAKTFVRSIWGACVPLFTIQMYHRLGDEWATSLMAFISLACCAIPYLFYIFGARIRTFSKYAYAPNMD
Protein: LP01207p (Thiamine pyrophosphate carrier protein 1, isoform A) (Thiamine pyrophosphate carrier protein 1, isoform B) (Q7K0L7)
Organism: Drosophila melanogaster (Fruit fly)
Subcellular location: Membrane {ECO:0000256|ARBA:ARBA00004141}; Multi-pass membrane protein {ECO:0000256|ARBA:ARBA00004141}.
Interaction partners:
- Large ribosomal subunit protein eL18
- Uncharacterized protein
Sequence:
MAVTTGSTSEATTTTTPVPRRKHSTREQLHQMLAGGLSAAITRSTCQPLDVLKIRFQLQVEPLGKNAAKEGPGALTSKYTSIGQAVKTIYREEGMLAFWKGHNPAQVLSIMYGICQFWTYEQLSLMAKQTSYLADHQHLSNFLCGAAAGGAAVIISTPLDVIRTRLIAQDTSKGYRNATRAVSAIVRQEGPRGMYRGLSSALLQITPLMGTNFMAYRLFSDWACAFLEVSDRSQLPTWTLLGLGASSGMLSKTIVYPFDLIKKRLQIQGFESNRQTFGQTLQCHGVWDCLRLTVRQEGVRGLYKGVAPTLLKSSMTTALYFSIYDKLKQVRF