wanglab/gogpt-training-data huggingface dataset:
Protein: Transposon Ty1-LR2 Gag-Pol polyprotein (Gag-Pol-p199) (TY1A-TY1B) (Transposon Ty1 TYA-TYB polyprotein) (p190) [Cleaved into: Capsid protein (CA) (Gag-p45) (p54); Ty1 protease (PR) (EC 3.4.23.-) (Pol-p20) (p23); Integrase (IN) (Pol-p71) (p84) (p90); Reverse transcriptase/ribonuclease H (RT) (EC 2.7.7.49) (EC 2.7.7.7) (EC 3.1.26.4) (Pol-p63) (p60)] (P0C2I5)
Organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Function: Capsid protein (CA) is the structural component of the virus-like particle (VLP), forming the shell that encapsulates the retrotransposons dimeric RNA genome. The particles are assembled from trimer-clustered units and there are holes in the capsid shells that allow for the diffusion of macromolecules. CA has also nucleocapsid-like chaperone activity, promoting primer tRNA(i)-Met annealing to the multipartite primer-binding site (PBS), dimerization of Ty1 RNA and initiation of reverse transcription (By similarity).
Subcellular location: Cytoplasm. Nucleus {ECO:0000250}.
Interaction partners:
Sequence:
MESQQLSQHSPISHGSACASVTSKEVHTNQDPLDVSASKTEECEKASTKANSQQTTTPASSAVPENPHHASPQPASVPPPQNGPYPQQCMMTQNQANPSGWSFYGHPSMIPYTPYQMSPMYFPPGPQSQFPQYPSSVGTPLSTPSPESGNTFTDSSSADSDMTSTKKYVRPPPMLTSPNDFPNWVKTYIKFLQNSNLGGIIPTVNGKPVRQITDDELTFLYNTFQIFAPSQFLPTWVKDILSVDYTDIMKILSKSIEKMQSDTQEANDIVTLANLQYNGSTPADAFETKVTNIIDRLNNNGIHINNKVACQLIMRGLSGEYKFLRYTRHRHLNMTVAELFLDIHAIYEEQQGSRNSKPNYRRNLSDEKNDSRSYTNTTKPKVIARNPQKTNNSKSKTARAHNVSTSNNSPSTDNDSISKSTTEPIQLNNKHDLHLGQELTESTVNHTNHSDDELPGHLLLDSGASRTLIRSAHHIHSASSNPDINVVDAQKRNIPINAIGDLQFHFQDNTKTSIKVLHTPNIAYDLLSLNELAAVDITACFTKNVLERSDGTVLAPIVKYGDFYWVSKKYLLPSNISVPTINNVHTSESTRKYPYPFIHRMLAHANAPTIRYSLKNNTITYFNESDVDWSSAIDYQCPDCLIGKSTKHRHIKGSRLKYQNSYEPFQYLHTDIFGPVHNLPNSAPSYFISFTDETTKFRWVYPLHDRREDSILDVFTTILAFIKNQFQASVLVIQMDRGSEYTNRTLHKFLEKNGITPCYTTTADSRAHGVAERLNRTLLDDCRTQLQCSGLPNHLWFSAIEFSTIVRNSLASPKSKKSARQHAGLAGLDISTLLPFGQPVIVNDHNPNSKIHPRGIPGYALHPSRNSYGYIIYLPSLKKTVDTTNYVILQGKESRLDQFNYDALTFDEDLNRLTASYHSFIASNEIQESNDLNIESDHDFQSDIELHPEQPRNVLSKAVSPTDSTPPSTHTEDSKRVSKTNIRAPREVDPNISESNILPSKKRSSTPQISNIESTGSGGMHKLNVPLLAPMSQSNTHESSHASKSKDFRHSDSYSENETNHTNVPISSTGGTNNKTVPQISDQETEKRIIHRSPSIDASPPENNSSHNIVPIKTPTTVSEQNTEESIIADLPLPDLPPESPTEFPDPFKELPPINSRQTNSSLGGIGDSNAYTTINSKKRSLEDNETEIKVSRDTWNTKNMRSLEPPRSKKRIHLIAAVKAVKSIKPIRTTLRYDEAITYNKDIKEKEKYIEAYHKEVNQLLKMKTWDTDEYYDRKEIDPKRVINSMFIFNKKRDGTHKARFVARGDIQHPDTYDSGMQSNTVHHYALMTSLSLALDNNYYITQLDISSAYLYADIKEELYIRPPPHLGMNDKLIRLKKSLYGLKQSGANWYETIKSYLIKQCGMEEVRGWSCVFKNSQVTICLFVDDMILFSKDLNANKKIITTLKKQYDTKIINLGESDNEIQYDILGLEIKYQRGKYMKLGMENSLTEKIPKLNVPLNPKGRKLSAPGQPGLYIDQDELEIDEDEYKEKVHEMQKLIGLASYVGYKFRFDLLYYINTLAQHILFPSRQVLDMTYELIQFMWDTRDKQLIWHKNKPTEPDNKLVAISDASYGNQPYYKSQIGNIYLLNGKVIGGKSTKASLTCTSTTEAEIHAISESVPLLNNLSYLIQELNKKPIIKGLLTDSRSTISIIKSTNEEKFRNRFFGTKAMRLRDEVSGNNLYVYYIETKKNIADVMTKPLPIKTFKLLTNKWIH
Protein: RNA-directed RNA polymerase catalytic subunit (EC 2.7.7.48) (Polymerase basic protein 1) (PB1) (RNA-directed RNA polymerase subunit P1) (C5E526)
Organism: Influenza A virus (A/New York/1682/2009(H1N1))
Subcellular location: Host nucleus {ECO:0000256|HAMAP-Rule:MF_04065}. Host cytoplasm {ECO:0000256|HAMAP-Rule:MF_04065}.
Interaction partners:
Sequence:
MDVNPTLLFLKIPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTETGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVDKLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMNKEEIEITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRGYLIRALTLNTMTKDAERGKLKRRAIATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTEISFTITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNILSMAPIMFSNKMARLGKGYMFESKRMKIRTQIPAEMLASIDLKYFNESTKKKIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLGVSILNLGQKKYTKTIYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKKKSYINKTGTFEFTSFFYRYGFVANFSMELPSFGVSGVNESADMSIGVTVIKNNMINNDLGPATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWDQTQSKVGLLVSDGGPNLYNIRNLHIPEVCLKWELMDDDYRGRLCNPLNPFVSHKEIDSVNNAVVMPAHGPAKSMEYDAVATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVSRARIDARVDFESGRIKKEEFSEIMKICSTIEELRRQK
Protein: Gb|AAF56406.1 (Zinc knuckle (CCHC-type) family protein) (Q9LTX7)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Subcellular location: Cytoplasm {ECO:0000256|ARBA:ARBA00004496}.
Interaction partners:
- E3 ubiquitin-protein ligase listerin
- GTP-binding protein At2g22870
- Large ribosomal subunit protein uL18z
- Large ribosomal subunit protein uL18y
- Large ribosomal subunit protein uL23y
- Large ribosomal subunit protein uL23z
- Large ribosomal subunit protein uL5z
- Large ribosomal subunit protein uL5c
- Large ribosomal subunit protein uL5y/uL5x/uL5w
- Large ribosomal subunit protein uL24c
Sequence:
MVKVRMNTADVAAEVKCLKRLIGMRCSNVYDISPKTYMFKLLNSSGITESGESEKVLLLMESGVRLHTTAYVRDKSNTPSGFTLKLRKHIRTRRLEDVRQLGYDRIIVFQFGLGANAHYVILELYAQGNIILTDSEYMIMTLLRSHRDDNKGFAIMSRHRYPIEICRVFERTTVSKLQESLTAFVLKDHDAKQIEPKEQNGGKKGGKSNDSTGAKQYTLKNILGDALGYGPQLSEHIILDAGLVPTTKLSEDKKLDDNEIQLLVQAVIVFEDWLEDIINGQKVPEGYILMQKQILANDTTSESGGVKKMYDEFCSILLNQFKSRVYEKFETFDAALDEFYSKIESQRSEQQQKAKEDSASLKLNKIRQDQENRVQILKKEVNHCVNMAELIEYNLEDVDAAILAVRVALAKGMGWDDLARMVKEEKKLGNPVAGVIDRLYLEKNCMTLLLCNNLDEMDDDEKTVPVEKVEVDLSLSAHGNARRWYEMKKKQETKQEKTVSAHEKAFRAAEKKTRHQLSQEKVVATISHMRKVHWFEKFNWFISSENYLVISGRDAQQNEMIVKRYMSKGDLYVHAELHGASSTVIKNHKPEQNVPPLTLNQAGCFTVCHSQAWDSKIVTSAWWVYPHQVTKTAPTGEYLTVGSFMIRGKKNFLPPHPLIMGFGLLFRLDESSLGAHLNERRVRGEEEGMNDVVMETHAPDEHSDTESENEAVNEVVSASGEVDLQESSTALSQDTSSLDMSSSGITEENVASATSQLEDLLDRTLGLGAATVAGKKDTIETSKDDMEEKMKQEEKNAVVRDKPYMSKAERRKLKMGQSGNTAADGNTGQEKQQRKEKDVSSLSQATKSIPDNKPAGEKVSRGQRGKLKKMKEKYADQDEDERKIRMALLASSGKPQKTDVESQNAKTAVTEVKKPSEETDDAVKICYRCKKVGHLARDCHGKETSDMDKVVMEEDDIHEVGDEEKEKLIDVDYLTGNPLPTDILLYAVPVCGPYNALQSYKYRVKAIPGSMKKGKAAKTAMNLFTHMSEASVREKELMKACTDPELMAALVGNVKITAAGLTQLKQKQKKGKKSGKQQHS
Protein: Zinc finger protein 746 (Parkin-interacting substrate) (PARIS) (Q6NUN9)
Organism: Homo sapiens (Human)
Function: Transcription repressor that specifically binds to the 5'-TATTTT[T/G]-3' consensus sequence on promoters and repress transcription of PGC-1-alpha (PPARGC1A), thereby playing a role in regulation of neuron death.
Subcellular location: Cytoplasm {ECO:0000269|PubMed:21376232}. Nucleus {ECO:0000305|PubMed:21376232}. Note=Mainly localizes to the cytoplasm; probably translocates to the nucleus to repress selected genes.
Interaction partners:
- Transcription intermediary factor 1-beta
- E3 ubiquitin-protein ligase parkin
- Zinc finger protein 212
- Zinc finger protein 398
- Peroxisome proliferator-activated receptor gamma coactivator 1-alpha
Sequence:
MAEAVAAPISPWTMAATIQAMERKIESQAARLLSLEGRTGMAEKKLADCEKTAVEFGNQLEGKWAVLGTLLQEYGLLQRRLENVENLLRNRNFWILRLPPGSKGESPKEWGKLEDWQKELYKHVMRGNYETLVSLDYAISKPEVLSQIEQGKEPCNWRRPGPKIPDVPVDPSPGSGPPVPAPDLLMQIKQEGELQLQEQQALGVEAWAAGQPDIGEEPWGLSQLDSGAGDISTDATSGVHSNFSTTIPPTSWQTDLPPHHPSSACSDGTLKLNTAASTEDVKIVIKTEVQEEEVVATPVHPTDLEAHGTLFGPGQATRFFPSPAQEGAWESQGSSFPSQDPVLGLREPARPERDMGELSPAVAQEETPPGDWLFGGVRWGWNFRCKPPVGLNPRTGPEGLPYSSPDNGEAILDPSQAPRPFNEPCKYPGRTKGFGHKPGLKKHPAAPPGGRPFTCATCGKSFQLQVSLSAHQRSCGAPDGSGPGTGGGGSGSGGGGGGSGGGSARDGSALRCGECGRCFTRPAHLIRHRMLHTGERPFPCTECEKRFTERSKLIDHYRTHTGVRPFTCTVCGKSFIRKDHLRKHQRNHAAGAKTPARGQPLPTPPAPPDPFKSPASKGPLASTDLVTDWTCGLSVLGPTDGGDM
Protein: Histone H2B.2 (Q59VP1)
Organism: Candida albicans (strain SC5314 / ATCC MYA-2876) (Yeast)
Function: Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
Subcellular location: Nucleus {ECO:0000250}. Chromosome {ECO:0000250}.
Interaction partners:
- Histone H4
- Histone H3.1/H3.2
- Histone H2A.2
- Histone H2A.1
- Histone H3.3
- Histone H2A.Z
- RNA polymerase-associated protein CTR9
- Rtf1p
- Histone H3-like centromeric protein CSE4
- FACT complex subunit SPT16
Sequence:
MAPKAEKKPASKAPAEKKPAAKKTASTDGAKKRTKARKETYSSYIYKVLKQTHPDTGISQKAMSIMNSFVNDIFERIASEASKLAAYNKKSTISAREIQTAVRLILPGELAKHAVSEGTRAVTKYSSASN
Protein: Adenine deaminase (ADE) (EC 3.5.4.2) (Adenine aminohydrolase) (AAH) (Q8X1T6)
Organism: Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) (Aspergillus nidulans)
Function: Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism. Has no activity with adenosine as a substrate.
Subcellular location: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_03145}. Nucleus {ECO:0000255|HAMAP-Rule:MF_03145}.
Interaction partners:
- Adenosine kinase
- Purine nucleoside phosphorylase
- 5'-nucleotidase
- adenosine deaminase
- Adenylosuccinate synthetase
- IMP-specific 5'-nucleotidase 1
- adenine phosphoribosyltransferase
- Uricase
- Positive regulator of purine utilization
- Epoxide hydrolase, putative
Sequence:
MCPPNTPYQSQWHAFLHSLPKCEHHVHLEGCLEPPLIFSMARKNNVSLPSPSSNPAYTSVETLSKRYGHFSSLDDFLSFYFIGMTVLKTQSDFAELAWTYFKRAHAEGVHHTEVFFDPQVHMERGLEYRVIVDGYVDGCKRAEKELGISTRLIMCFLKHLPLESAQRLYDTALNEGDLGLDGRNPVIHGLGASSSEVGPPKDLFRPIYLGAKEKSINLTAHAGEEGDASYIAAALDMGATRIDHGIRLGEDPELMERVAREEVLLTVCPVSNLQLKCVKSVAEVPIRKFLDAGVRFSINSDDPAYFGAYILECYCAVQEAFNLSVADWRLIAENGVKGSWIGEERKNELLWRIDECVKRFEGVL
Protein: Maltose operon periplasmic protein (P03841)
Organism: Escherichia coli (strain K12)
Function: Not yet known. Might function in the uptake of a still unidentified substrate.
Subcellular location: Periplasm.
Interaction partners:
- Maltoporin
- Maltose/maltodextrin import ATP-binding protein MalK
- Maltose/maltodextrin transport system permease protein MalF
- Maltose/maltodextrin transport system permease protein MalG
- Maltose/maltodextrin-binding periplasmic protein
- 4-alpha-glucanotransferase
Sequence:
MKMNKSLIVLCLSAGLLASAPGISLADVNYVPQNTSDAPAIPSAALQQLTWTPVDQSKTQTTQLATGGQQLNVPGISGPVAAYSVPANIGELTLTLTSEVNKQTSVFAPNVLILDQNMTPSAFFPSSYFTYQEPGVMSADRLEGVMRLTPALGQQKLYVLVFTTEKDLQQTTQLLDPAKAYAKGVGNSIPDIPDPVARHTTDGLLKLKVKTNSSSSVLVGPLFGSSAPAPVTVGNTAAPAVAAPAPAPVKKSEPMLNDTESYFNTAIKNAVAKGDVDKALKLLDEAERLGSTSARSTFISSVKGKG
Protein: WASH complex subunit 2 (Q552E2)
Organism: Dictyostelium discoideum (Social amoeba)
Interaction partners:
- Vacuolar protein sorting-associated protein 35
- WASH complex subunit 5
- WAS protein family homolog DDB_G0292878
- WASH complex subunit 3
- WASH complex subunit 4
- Maestro heat-like repeat-containing protein family member 1
- Vacuolar protein sorting-associated protein 29
- COMM domain-containing protein 1
- Vacuolar protein sorting-associated protein 26
Sequence:
MPEEQPQQQQQPVREQPSNPDDVPWKKVWTINEMRDSAKDWNLSSDAGLLNYMQDFANKLIYKTKELEFQVDELVKDSKSIHVKVHNTFDQFLMLSNTQFIENRVYEDNSELNNEQNEQTDKPQQQEITEEILIPKFSKAILIGLEALEKANFVNAALEISEQSNSNNNNNDYQQQMNGSIAASSAEGGLVEGGEQAGTDAQPSANTEKKKEKLDHYLRYPLPHIIGSQQFHQDDFCGLFIEDSDSDSSDEEDEEDVDAEDGSDESSSESSSDDDDEKDEQQQSTLFLTDEQPKQQNFFFQDEDATSENNANKKVSESLFEDEDDIFGDKPVASKKSSNSYTSSLSDILGGDDEDDLFGGSKKKQQQQEDADGDEPTKKKDPFADELNNTLSSKNKGGDDDLFGGSSSTTTTSKPKKKSMFDDDLFGDSEETPAPKSSASRKVTFDDSLFGDDETALPTSKKDSTTTSSQPQQKKTLNDLFTDEDLTPATKKETKKSSSLSFLDGMDEDDLFGTPKPKSTTTSAAPTATTTKPPTPIPDSDASGSESTTGKSSPAPKKPVGGVKLFDFDAAGGDIFSGKKVGTGGKSSPSPAPKTESKASEDDFFSSDKKSTSATKKDAEIFGSEGGLLDVPEKKIKRHDPKKYVDSDVLGIDSISSDKNKPKVQDPFGVGAAGSNDDDSFDIPKANSKKEQETKPTKSTTTDDDLDIPKAPTTATTTTTTKPAVKKSTKSNFFDFEDTDSPLSSNKKSGGDDDLFSFDSSKTTTETKKQPITEEPKKKQDTTTTPSIDPFSGLDIKKPSEASISPASPVSTIESDPLFGDIKKPVAQKPKKTNFFDGDLTKDEPAKSEPTKVEPTKVEPTKAEPTKVEPAKVEPTKVESDKKESNPLGGGDEESVFGDFSIKKNPTTSSSTTATENKPAVKKSTKSNFFDFEDTDSPLSSNKKNDDDIFSSTTKKSTTTTTTTTSSKDFFGDLDTSSGNKKVEEKKSSDFDSFFSGSDDPLGITKPKSKTTTTPPLTSTTANIESDDPLSLGLPTFTNNNNNNNAKPPPPPSPLGEDVPSPLTSNNTKNRTKSIGSMFEAQQQLQQQQQEKNRSESPTSEKAEPTKKTSNISSLQNKLSLNPNMFLPGSKMPKKKKEESENEDDSSTNNDNDSSATDLSDSGRSSPSVTSPTLSGGRPRRNTVSSRNNNDSEESEPVKELTHATASRPKSGGRRPPTRKSGTSAPNRSESPTPTQKSDSESEKVRSSSPITTKPVVSEPTKKTISNTSFFDDIPSEKTSSGKSSPSPTIKSTSEKVTIDPLGDIFASTTTKPTASETKAALSSAPKKSEPETPKETPKETPKEKEQTKEKEQPKETPKTTTTKKSTKAVETKSETDSFFDDIPDIISRPKASVKSAAAKKASSTTKPVISDDIFDDITSTTSKSTTTTTTTTTTKAKSTKAVDNLFDDDTNTTTKATPTKATPSKSKPKAKNVENLFD
Protein: Antitoxin ParD2 (P9WJ75)
Organism: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Function: Antitoxin component of a type II toxin-antitoxin (TA) system. Upon expression in E.coli neutralizes the effect of cognate toxin ParE2.
Interaction partners:
- Toxin ParE2
- Antitoxin ParD1
- Toxin ParE1
Sequence:
MVVNRALLASVDALSRDEQIELVEHINGNLAEGMHISEANQALIEARANDTDDAHWSTIDDFDKRIRARLG
Protein: ADP-ribose glycohydrolase OARD1 (O-acetyl-ADP-ribose deacetylase 1) (EC 3.5.1.-) (Terminal ADP-ribose protein glycohydrolase 1) ([Protein ADP-ribosylglutamate] hydrolase OARD1) (EC 3.2.2.-) (Q9Y530)
Organism: Homo sapiens (Human)
Function: ADP-ribose glycohydrolase that hydrolyzes ADP-ribose and acts on different substrates, such as proteins ADP-ribosylated on glutamate and O-acetyl-ADP-D-ribose. Specifically acts as a glutamate mono-ADP-ribosylhydrolase by mediating the removal of mono-ADP-ribose attached to glutamate residues on proteins. Does not act on poly-ADP-ribosylated proteins: the poly-ADP-ribose chain of poly-ADP-ribosylated glutamate residues must by hydrolyzed into mono-ADP-ribosylated glutamate by PARG to become a substrate for OARD1. Deacetylates O-acetyl-ADP ribose, a signaling molecule generated by the deacetylation of acetylated lysine residues in histones and other proteins. Catalyzes the deacylation of O-acetyl-ADP-ribose, O-propionyl-ADP-ribose and O-butyryl-ADP-ribose, yielding ADP-ribose plus acetate, propionate and butyrate, respectively.
Subcellular location: Nucleus, nucleoplasm {ECO:0000269|PubMed:23481255, ECO:0000269|PubMed:29712969}. Nucleus, nucleolus {ECO:0000269|PubMed:29712969}. Chromosome {ECO:0000269|PubMed:23481255}. Note=Localizes both in the nucleoplasm and in the nucleolus (PubMed:29712969). Relocalizes to the nucleoplasm in response to DNA damage (PubMed:29712969). Recruited to DNA lesion regions following DNA damage (PubMed:23481255). {ECO:0000269|PubMed:23481255, ECO:0000269|PubMed:29712969}.
Interaction partners:
- ADP-ribose glycohydrolase MACROD1
- ADP-ribose glycohydrolase MACROD2
- Poly
- ADP-ribosylhydrolase ARH3
- Protein mono-ADP-ribosyltransferase PARP10
Sequence:
MASSLNEDPEGSRITYVKGDLFACPKTDSLAHCISEDCRMGAGIAVLFKKKFGGVQELLNQQKKSGEVAVLKRDGRYIYYLITKKRASHKPTYENLQKSLEAMKSHCLKNGVTDLSMPRIGCGLDRLQWENVSAMIEEVFEATDIKITVYTL
Protein: Vacuolar protein-sorting-associated protein 37 homolog 1 (AtVPS37-1) (ESCRT-I complex subunit VPS37 homolog 1) (Q9SCP9)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process. Required for the sorting of endocytic ubiquitinated cargos into multivesicular bodies (MVBs) (By similarity).
Subcellular location: Endosome {ECO:0000250}.
Interaction partners:
- Protein ELC-like
- Vacuolar protein sorting-associated protein 28 homolog 2
- Vacuolar protein sorting-associated protein 28 homolog 1
- Protein ELC
- Vacuolar protein sorting-associated protein 2 homolog 1
- Putative vacuolar protein sorting-associated protein 24 homolog 2
- Vacuolar protein sorting-associated protein 36
- Vacuolar protein sorting-associated protein 32 homolog 2
- Vacuolar protein sorting-associated protein 32 homolog 1
- Vacuolar protein sorting-associated protein 24 homolog 1
Sequence:
MFNFWGSKDQQQGQSRPQEASSQSPWYSPSLVSSPSSSRPQSSGQISAQVSPGEAAGIIVFLKDKSVDELRKLLSDKDAYQQFLLSLDQVKVQNNIKDELRRETLQLARDNLEKEPQIMELRNQCRIIRTTELATAQEKLNELERQKEEILKFYSPGSLLHKLQEAMNQVDEESEALQEKFLEKEIDTAAFVQKYKKLRTTYHRRALIHLAAKTSNI
Protein: ubiquitinyl hydrolase 1 (EC 3.4.19.12) (A0A0R4IPL2)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Interaction partners:
Sequence:
MQKALKKYFVSMDEYLASIGLYRKMMARDASCLFRAVSEQLYYSQNYHQRIRKECVNFIRANRCNFEPFVEGSFEKYLERLEDPKETVGQVIIKALSLLYRRCFVIYRYPGKPPTEIAEEDNLPKILLCCSNNGHYDIVYPKSYPVDAAVCQALLYELLYTRVLGVEDNEIQAALEGFKGGGRRYRNSHSMCSEDASYDTPEDRSQREDWESRGHCRFDDRPRVGAEDQKVTEGSGKLALPYKVLKALEPELYRNVEFDVWQDSRKELQKTDYMVFAGRQYFLGDKCQVRLDPKGKYYNAFIQEVGTHSTAVTVFIEELGEKHLVSLTNLKPVNPVPAWNITPSRKGNSYSHAEQYPGELDPELRGRRRFFKKPRGVHSPAPPPPGLIYEHYRPHPPPRQPRGYGPPSSARFLNRHHLIGPDMAYYPSPSKRCYQSFDNYSFRSRSRRQMHTLNKECLSCVPEPGEETQDMEGSITFYELEETDEGAFSPISGQAVSSPMVPGATAYWVPRVPSPIPPSGKQAMTSSEEDPDERSAGGDQGEYSEEYIYSAAEAGYQSPSVYAAAAESTTNLTIQEGSSRAGSPQEGVATYSYSQQVVVKSSVLSSSQPINSAPAAIFTSNSSSSSTGSSQTPPNSLQPNNILTPGQLPPGRPAVPWFVNELGEPVAMAPPPPYSYDPNGSDLPRDCKVLQYYYNLGVQWYQQSYWHSMVHLQQVYPHQAADAQFQSYQSTAPPADHTVPQAYPDSVRMCPHPQGDMPSNGAPLGMENPPTVVPGTVFYPVVQEQCGQPALHSTYDPYMPVLSTTYHYLTPWTPGAAPHSRFHHTTYCPSSSHPPVNYITAPGHPNHLPHSQFV
Protein: Transmembrane protein (F4IKG5)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Interaction partners:
Sequence:
MFRSSPRRGQRSKGFKVKHCIQLTLLLSVGIWLLYQVKHSHEKKAQFEESAKIVVGGVDKVVKLGRKDLIPRVVEVDEAEDEGSKNVVESFNSGNGDDKENEIVEGGEENKEKESEGIVSNEDSNSEIEEKKDSGGVEESEVEEKRDNGGGTEENEKSGTEESEVEERKDNGGTEENEKSGTEESEVEERKDNGGTEENEKSGTEESEVEERKENGGTEENEKSGSEESEVEEKKDNGGTEESREKSGTEESEVEEKKDNGSSEESEVEEKKENRGIDESEESKEKDIDEKANIEEARENNYKGDDASSEVVHESEEKTSESENSEKVEDKSGIKTEEVEDSVIKSVLPNTTDNGESSSDEKSTGSSSGHESDSLEGIKSEGESMEKNELLEKEFNDSNGESSVTGKSTGSGDGGSQETSEVSSQEESKGKESETKDKEESSSQEESKDRETETKEKEESSSQEETMDKETEAKEKVESSSQEKNEDKETEKIESSFLEETKEKEDETKEKEESSSQEKTEEKETETKDNEESSSQEETKDKENEKIEKEEASSQEESKENETETKEKEESSSQEETKEKENEKIEKEESAPQEETKEKENEKIEKEESASQEETKEKETETKEKEESSSNESQENVNTESEKKEQVEENEKKTDEDTSESSKENSVSDTEQKQSEETSEKEESNKNGETEVTQEQSDSSSDTNLPQEVKDVRTDLETLPDSGNGGSNESVAAE
Protein: Large ribosomal subunit protein uL30w (60S ribosomal protein L7-4) (Q9LHP1)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Interaction partners:
- Large ribosomal subunit protein uL23y
- Large ribosomal subunit protein uL22y
- Large ribosomal subunit protein eL32z
- Large ribosomal subunit protein eL31z
- Small ribosomal subunit protein eS24y
- Small ribosomal subunit protein eS1y
- Large ribosomal subunit protein uL4z
- Small ribosomal subunit protein uS12y
- Large ribosomal subunit protein uL18y
- Large ribosomal subunit protein uL18z
Sequence:
MTEAESKTVVPESVLKKRKREEEWALAKKQELEAAKKQNAEKRKLIFNRAKQYSKEYQEKERELIQLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVTYGYPNLKSVKELIYKRGFGKLNHQRTALTDNSIVDQGLGKHGIICVEDLIHEIMTVGPHFKEANNFLWPFQLKAPLGGMKKKRNHYVEGGDAGNRENFINELVRRMN
Protein: Fluorescent protein Dronpa (Q5TLG6)
Organism: Echinophyllia sp. SC22
Interaction partners:
Sequence:
MSVIKPDMKIKLRMEGAVNGHPFAIEGVGLGKPFEGKQSMDLKVKEGGPLPFAYDILTTVFCYGNRVFAKYPENIVDYFKQSFPEGYSWERSMNYEDGGICNATNDITLDGDCYIYEIRFDGVNFPANGPVMQKRTVKWEPSTEKLYVRDGVLKGDVNMALSLEGGGHYRCDFKTTYKAKKVVQLPDYHFVDHHIEIKSHDKDYSNVNLHEHAEAHSELPRQAK
Protein: Fucolectin-2 (Q9I930)
Organism: Anguilla japonica (Japanese eel)
Function: Acts as a defensive agent. Recognizes blood group fucosylated oligosaccharides including A, B, H and Lewis B-type antigens. Does not recognize Lewis A antigen and has low affinity for monovalent haptens.
Subcellular location: Secreted, extracellular space {ECO:0000269|PubMed:10924498}.
Interaction partners:
Sequence:
MKVKMIMLLFQILAILTLKSDSADVPDGYIQENVALRGRATQSAQLRGEHAGISHASNAIDGNRDSYFYHGSCSHTEGDNPLWRVDLLQVYTITSVTITNRGDCCGERISGARILIGKHLENNGINNPECSTINIMAAGETRTFHCPQPMIGRYVTVYLPKTGTLHLCEVEVNVLFPAPC
Protein: receptor protein serine/threonine kinase (EC 2.7.11.30) (Q1RLX1)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Subcellular location: Membrane {ECO:0000256|ARBA:ARBA00004479}; Single-pass type I membrane protein {ECO:0000256|ARBA:ARBA00004479}.
Interaction partners:
- Bone morphogenetic protein 4.
- Bone morphogenetic protein 2
- Bone morphogenetic protein 7
- Bone morphogenetic protein 6.
- Mothers against decapentaplegic homolog 5
- Bone morphogenetic protein 2a.
- Mothers against decapentaplegic homolog
- Bone morphogenetic protein 5.
- Growth differentiation factor 5
- Mothers against decapentaplegic homolog 1
Sequence:
MRQLLFITVVLTGVCLLLTLCSGAGQNPDHVLQGTGVKLDSRRPGDDSTIAPEDAARFLSCHCSGHCPDDAKNNTCETNGQCFAIIEEDENGDVILSSGCMKYEGSHFQCKDSQFAQTRRTIECCQFDFCNQDLKPELPPRDSEPPDPHWLAFLISVTVCFCALICVTVICYYRYKWQTERQRYHRDLEQDEAFIPAGESLKDLINQSQTSGSGSGLPLLVQRTIAKQIQTVRMIGKGRYGEVWLGRWRGEKVAVKVFFTREEASWFRETEIYQTVLMRHENILGFIAADINGTGASTQLYLITDYHENGSLYDYLKFTTLDTQALLRLAFSAACGLCHLHTEIYGTQGKPAIAHRDLKSKNILIKKNGTCCIADLGLAVKFNSDTNEVDLPLSTRMGTRRYMAPEVLDETLNKNHFQAYIMADIYSYGLVIWEMARRCVTGGIVEEYQLPYYEMVPSDPSYEDMLEVVCVKGLRPTVSNRWNSDECLRAMLKLMSECWAHNPASRLTILRVKKTLAKMVESQDIKI
Protein: Efflux pump membrane transporter (Q9RG59)
Organism: Pseudomonas aeruginosa
Subcellular location: Cell inner membrane {ECO:0000256|ARBA:ARBA00004429, ECO:0000256|RuleBase:RU364070}; Multi-pass membrane protein {ECO:0000256|ARBA:ARBA00004429, ECO:0000256|RuleBase:RU364070}.
Interaction partners:
Sequence:
MARFFIDRPVFAWVISLLIVLAGVLAIRFLPVAQYPDIAPPVVNVSASYPGASAKVVEEAVTAIIEREMNGAPGLLYTKATSSTGQASLTLTFRQGVNADLAAVEVQNRLKIVESRLPESVRRDGIYVEKAADSIQLIVTLTSSSGRYDAMELGEIASSNVLQALRRVEGVGKVETWGAEYAMRIWPDPAKLTSMNLSASDLVNAVRRHNARLTVGDIGNLGVPDSAPISATVKVDDTLVTPEQFGEIPLRIRADGGAIRLRDVARVEFGQSEYGFVSRVNQMTATGLAVKMAPGSNAVATAKRIRATLDELSRYFPEGVSYNIPYDTSAFVEISIRKVVSTLLEAMLLVFAVMYLFMQNFRATLIPTLVVPVALLGTFTVMLGLGFSINVLTMFGMVLAIGILVDDAIIVVENVERLMAEEGLSPHDATVKAMRQISGAIVGITVVLVSVFVPMAFFSGAVGNIYRQFAVTLAVSIGFSAFLALSLTPALCATLLRPIDADHHEKRGFFGWFNRAFLRLTGRYRNAVAGILARPIRWMLVYTLVIGVVALLFVRLPQAFLPEEDQGDFMIMVMQPEGTPMAETMANVGDVERYLAEHEPVAYAYAVGGFSLYGDGTSSAMIFATLKDWSERREASQHVGAIVERINQRFAGLPNRTVYAMNSPPLPDLGSTSGFDFRLQDRGGVGYEALVKARDQLLARAAEDPRLANVMFAGQGEAPQIRLDIDRRKAETLGVSMDEINTTLAVMFGSDYIGDFMHGSQVRKVVVQADGAKRLGIDDIGRLHVRNEQGEMVPLATFAKAAWTLGPPQLTRYNGYPSFNLEGQAAPGYSSGEAMQAMEQLMQGLPEGIAHEWSGQSFEERLSGAQAPALFALSVLIVFLALAALYESWSIPLAVILVVPLGVLGALLGVSLRGLPNDIYFKVGLITIIGLSAKNAILIIEVAKDHYQEGMSLLQATLEAARLRLRPIVMTSLAFGFGVVPLALSSGAGSGAQVAIGTGVLGGIVTATVLAVFLVPLFFLVVGRLFRLRKAPRTGNSPQIPTEQA
Protein: Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63) (6-O-methylguanine-DNA methyltransferase) (MGMT) (O-6-methylguanine-DNA-alkyltransferase) (P16455)
Organism: Homo sapiens (Human)
Function: Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated.
Subcellular location: Nucleus.
Interaction partners:
- Isocitrate dehydrogenase cytoplasmic
- Isocitrate dehydrogenase, mitochondrial
- Cyclin-dependent kinase inhibitor 2A
- Ras association domain-containing protein 1
- DNA mismatch repair protein Mlh1
- DNA-3-methyladenine glycosylase
- Epidermal growth factor receptor
- Mismatch repair endonuclease PMS2
- N-glycosylase/DNA lyase
- DNA mismatch repair protein Msh2
Sequence:
MDKDCEMKRTTLDSPLGKLELSGCEQGLHEIKLLGKGTSAADAVEVPAPAAVLGGPEPLMQCTAWLNAYFHQPEAIEEFPVPALHHPVFQQESFTRQVLWKLLKVVKFGEVISYQQLAALAGNPKAARAVGGAMRGNPVPILIPCHRVVCSSGAVGNYSGGLAVKEWLLAHEGHRLGKPGLGGSSGLAGAWLKGAGATSGSPPAGRN