wanglab/gogpt-training-data huggingface dataset:
Protein: Receptor protein-tyrosine kinase CEPR1 (EC 2.7.10.1) (Protein C-TERMINALLY ENCODED PEPTIDE RECEPTOR 1) (Protein XYLEM INTERMIXED WITH PHLOEM 1) (Q9FGL5)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Receptor kinase involved in the perception of C-terminally encoded plant signaling peptide (CEP) and subsequent regulation of root and shoot development. Required for xylem and phloem cell files morphology and organization, probably by preventing ectopic lignification in phloem cells. Together with CEPR2, mediates systemic nitrogen (N)-demand signaling upon the perception of root-derived peptides (e.g. CEP1) via the up-regulation of genes involved in N uptake and assimilation pathways. Regulates positively lateral root initiation and development; probably repressed by the signaling peptide CEP5.
Subcellular location: Cell membrane {ECO:0000305}; Single-pass membrane protein {ECO:0000255}.
Interaction partners:
- Precursor of CEP1
- Precursor of CEP5
- High-affinity nitrate transporter 2.1
- CLAVATA3/ESR
- Protein CLAVATA 3
- High affinity nitrate transporter
Sequence:
MRLKNFPFFVLFFFFCFNSNQSWGLMSSNQQPQFFKLMKNSLFGDALSTWNVYDVGTNYCNFTGVRCDGQGLVTDLDLSGLSLSGIFPDGVCSYFPNLRVLRLSHNHLNKSSSFLNTIPNCSLLRDLNMSSVYLKGTLPDFSQMKSLRVIDMSWNHFTGSFPLSIFNLTDLEYLNFNENPELDLWTLPDSVSKLTKLTHMLLMTCMLHGNIPRSIGNLTSLVDLELSGNFLSGEIPKEIGNLSNLRQLELYYNYHLTGSIPEEIGNLKNLTDIDISVSRLTGSIPDSICSLPNLRVLQLYNNSLTGEIPKSLGNSKTLKILSLYDNYLTGELPPNLGSSSPMIALDVSENRLSGPLPAHVCKSGKLLYFLVLQNRFTGSIPETYGSCKTLIRFRVASNRLVGTIPQGVMSLPHVSIIDLAYNSLSGPIPNAIGNAWNLSELFMQSNRISGVIPHELSHSTNLVKLDLSNNQLSGPIPSEVGRLRKLNLLVLQGNHLDSSIPDSLSNLKSLNVLDLSSNLLTGRIPENLSELLPTSINFSSNRLSGPIPVSLIRGGLVESFSDNPNLCIPPTAGSSDLKFPMCQEPHGKKKLSSIWAILVSVFILVLGVIMFYLRQRMSKNRAVIEQDETLASSFFSYDVKSFHRISFDQREILESLVDKNIVGHGGSGTVYRVELKSGEVVAVKKLWSQSNKDSASEDKMHLNKELKTEVETLGSIRHKNIVKLFSYFSSLDCSLLVYEYMPNGNLWDALHKGFVHLEWRTRHQIAVGVAQGLAYLHHDLSPPIIHRDIKSTNILLDVNYQPKVADFGIAKVLQARGKDSTTTVMAGTYGYLAPEYAYSSKATIKCDVYSFGVVLMELITGKKPVDSCFGENKNIVNWVSTKIDTKEGLIETLDKRLSESSKADMINALRVAIRCTSRTPTIRPTMNEVVQLLIDATPQGGPDMTSKPTTKIKDSIVSDHLTQTRL
Protein: Flotillin (Q5ZHQ3)
Organism: Gallus gallus (Chicken)
Subcellular location: Membrane {ECO:0000256|RuleBase:RU366054}. Endosome {ECO:0000256|RuleBase:RU366054}.
Interaction partners:
Sequence:
MCTEAGPGPGGASQTPRGTLTVEQIYQDRDQFAKLVREVAAPDVGRMGIEILSFTIKDVYDKVDYLSSLGKTQTAAVRRDADIGVAEAERDAGIREAECKKEMLDVKFMADTKIADSRRAFELQKAAFTEEVNIKTAEAQLAYELQSAREQQKIRQEEIEIEVVQRKKQIDVEEKEIIRKEKELIATVKRPAEAEAYRIQQIAEGEKVRRVLLAQAEAEKIRKIGEAEAFVIEAIGMAEAERMKLKAEALQSYGEAAQLALVLDALPEIAAKVAAPLSRVDEIVVLSGESGNVTSEVNRLLAEIPASVRAITGVDLTKIPLIQKATGAQA
Protein: FAD dependent oxidoreductase domain-containing protein (G5EB56)
Organism: Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) (Aspergillus nidulans)
Interaction partners:
Sequence:
MTPRANTKIIVVGGGGTMGSSTALHLLRAGYTPSNITVLDTCPIPSAQSAGYDLNKIMSIRLRNKPDLQLSLEALDMWKNDPLFKPFFHNVGMIDVSSTEEGIEGLRKKYQSLLDAGIGLEKTNFMLESEDEILAKAPHFTQEQIKGWKGLFCGDGGWLAAAKAINAIGQFLKEQGVKFGFGGAGTFKKPLFADAHEKTCIGVETVDGTKYYADKVVLAAGAWSSTLVDLEEQCVSKAWVFAHIQLTPAEAAAYKNTPVIYDGDYGFFFEPNENGIIKVCDEFPGFTHFKMHQPYGSPAPKPISVPRSHAKHPTDTYPHASEVTIKKAINRFLPRFNDKELFNRAMCWCTDTADANLLVCEHPRWKGFYLATGDSGHSFKLLPNIGKHVVELLEERLESVFKDAWRWRPGSGDALKSRRAAPAKDLADMPGWRNEAKM
Protein: RQC trigger complex subunit RQT4 (P36119)
Organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Function: Functions as part of the RQC trigger (RQT) complex that activates the ribosome quality control (RQC) pathway, a pathway that degrades nascent peptide chains during problematic translation.
Subcellular location: Cytoplasm, cytosol {ECO:0000305|PubMed:28223409, ECO:0000305|PubMed:28757607}.
Interaction partners:
- RQC trigger complex helicase SLH1
- RQC trigger complex subunit CUE3
- DNA-directed RNA polymerase II subunit RPB1
- Mediator of RNA polymerase II transcription subunit 10
- Mediator of RNA polymerase II transcription subunit 17
- Ribosome quality control complex subunit 2
- Oxalate--CoA ligase
- Protein STB5
- E3 ubiquitin-protein ligase HEL2
- Endonuclease CUE2
Sequence:
MTRKQAIDYAIKQVPQILPLEESDVKALCEQVLSTSSDDPEQIASKFLEFLGHEDLSFEFVMKFNELLNQNDKKEEKKTKNVHLEHTAPTSWKNESKQPTNNYINKKGDEKPKKLKDEKKSSTTRPTVQPSNQSTQSNPIKEKKEHRSKGKLQSLQEIDEAIKMLELRDSGSSKNCNCQGTRHPVFDIAPNCLHCGKVVCVIEGLNKGKCGHCHEQLISDNERTQMVEILNQEKNELNGSSSSLSNASNGANVPKKKTKTYKITSGMGKNLFAEQDKLFDFIERKRERERKRNEVLKLQEEKEESEAKERQASEHDHKAEENPELLAAQERLDRLLYFQDTSAERTKIIDNASDFDMNQEVGLWGSARERALALKKQQRNLRKWEKVEKERNGRREKYVVSMNIGSNGKVTMTEVPKDTENVIAGSDDDISDISDEEDISDLKHIHALKSEINTTKSLENLHLQSKAWDYERDKKQFDRPTYVKKNSDTAQQNRKTEEKAHDMQAYDLKSRVQVDQNADASVEQNILAVL
Protein: Centrosomal protein POC5 (Protein of centriole 5) (B0S5R1)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Subcellular location: Cytoplasm, cytoskeleton, microtubule organizing center, centrosome, centriole {ECO:0000256|ARBA:ARBA00004114}.
Interaction partners:
- Centrin 3.
- Kinesin-like protein
- WD repeat-containing protein 90
- Protein FAM161A
- POC1 centriolar protein homolog B
- SFI1 centrin-binding protein.
- Urotensin-2 receptor
- Centrin, EF-hand protein, 2
- S phase cyclin A-associated protein in the endoplasmic reticulum
- isoleucine--tRNA ligase
Sequence:
MSSDEGERNSPDLPRDSDRGSSVSSALQDEYEELLRYAVVTPKNDPSLPSQLLNTTQLTKNPQHTPKRDTAAQLLADNEGQLNIRATPTPLLEESRPPSRMSEAEIMSARSVLSEERSARVQTGSDRSQQSSPDALITTTTEIFISEDNLNRMENILDTWSTTLKSNVMMELRKWKLAFVEQHRLELKKEREKHAAQMTAVNAEMDSLKDLLNTYQISNQRKDEVIVNLSRAVDRQRQKLELMRSFTQWRMRQSAAREETQGSRLAEQHYHMQLKRKVWSGWHSLIQNRWRERVERACCARAEDVCMQLSTDYEAKMAQHVEELQKAQAEIHRLHMERERYEDSMKKAFMRGVCALNIEALSMFNTGEATRLDRDGPPQRDEPSTSSTTNLPPRNASSARLSPIVMESPILGPSHSNPEDVEPEQFFSQPSSSTGPRVETLVSTTVVNSTGPPGGSIHPFRQANSRIVTAGKQKASKTVTARLTGRVEHRTSRPPAAMHVMGVAPPMSSVVVERHHPVTQLTVGQATAAKFPRPAPQSQTVSSSKSSSSQTRGTSSSFHLHSIKVVD
Protein: GTP-binding protein ypt5 (P36586)
Organism: Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Function: Protein transport. Probably involved in vesicular traffic (By similarity).
Subcellular location: Cell membrane {ECO:0000305}; Lipid-anchor {ECO:0000305}; Cytoplasmic side {ECO:0000305}.
Interaction partners:
- Phosphatidylinositol 3-kinase pik3
- Vacuolar protein sorting-associated protein 9b
- Vacuolar protein sorting-associated protein 8
- Vacuolar segregation protein pep7
- Vacuolar protein sorting-associated protein vps901
- Probable secretory pathway GDP dissociation inhibitor 1
- Vacuolar morphogenesis protein 6
- Vacuolar membrane protein pep3
- Probable vacuolar protein sorting-associated protein 16 homolog
- Vacuolar protein sorting-associated protein 33
Sequence:
MASNTAPKNVVTINQKLVLLGDSAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTLPIDENTSVKLEIWDTAGQERYKSLAPMYYRNANCAIVVYDITQAASLEKAKSWIKELQRQAPEGIVIALAGNKLDLAQERRAVEKADAEAYAAEANLLFFETSAKTAENVNELFTAIAKKLPLEDKLNQARGAVNRGVNLSEARPAAQPSGSCSC
Protein: M-phase-specific PLK1-interacting protein (TTD non-photosensitive 1 protein) (Q8TAP9)
Organism: Homo sapiens (Human)
Function: May play a role in maintenance of cell cycle integrity by regulating mitosis or cytokinesis.
Subcellular location: Nucleus. Cytoplasm. Cytoplasm, cytoskeleton, microtubule organizing center, centrosome. Note=The subcellular location is regulated during cell cycle. During interphase located in the nucleus. During mitosis located at the centrosome and dispersed in the cytoplasm. During telophase located in the midbody. Colocalizes with PLK1 at the centrosome in M phase.
Interaction partners:
- Succinyl-CoA:glutarate CoA-transferase
- Protein FAM3B
- General transcription factor IIH subunit 5
- Constitutive coactivator of PPAR-gamma-like protein 2
- DnaJ homolog subfamily C member 28
- E3 ubiquitin-protein ligase RNF113A
Sequence:
MQRQNFRPPTPPYPGPGGGGWGSGSSFRGTPGGGGPRPPSPRDGYGSPHHTPPYGPRSRPYGSSHSPRHGGSFPGGRFGSPSPGGYPGSYSRSPAGSQQQFGYSPGQQQTHPQGSPRTSTPFGSGRVREKRMSNELENYFKPSMLEDPWAGLEPVSVVDISQQYSNTQTFTGKKGRYFC
Protein: 3'-5' exonuclease eri1 (EC 3.1.-.-) (Enhanced RNAi protein) (Q08I43)
Organism: Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Function: RNA exonuclease that acts as a negative regulator of RNA interference (RNAi). Acts by degrading the 3'-overhangs of double-stranded short interfering RNAs (siRNAs). Represses the accumulation of heterochromatic siRNAs leading to negative regulation of the RNAi-mediated heterochromoatin assembly. Also involved in rRNA biogenesis, trimming the 5.8S ribosomal RNA (rRNA) from a slightly longer pre-5.8S RNA in the cytoplasm.
Subcellular location: Cytoplasm {ECO:0000269|PubMed:16797182, ECO:0000269|PubMed:16823372}.
Interaction partners:
- Protein Dicer
- Protein argonaute
- RNA-dependent RNA polymerase 1
- DIS3-like exonuclease 2
- Terminal uridylyltransferase cid1
- RNA exonuclease 4
Sequence:
MESPVQILVWPFPCDEMNQKTPSTVEEIRIALQELGLSTNGNKEKLKRRWKFREKRLEEKRKQERYQKFSTSNENKTCLRYLLIVDVEATCEEGCGFSFENEIIELPCLLFDLIEKSIIDEFHSYVRPSMNPTLSDYCKSLTGIQQCTVDKAPIFSDVLEELFIFLRKHSNILVPSVDEIEIIEPLKSVPRTQPKNWAWACDGPWDMASFLAKQFKYDKMPIPDWIKGPFVDIRSFYKDVYRVPRTNINGMLEHWGLQFEGSEHRGIDDARNLSRIVKKMCSENVEFECNRWWMEYEKNGWIPNRSYPPYFAS
Protein: Carbohydrate diacid regulator (Sugar diacid regulator) (P37047)
Organism: Escherichia coli (strain K12)
Function: Seems to regulate the expression of the operons for the enzymes involved in D-galactarate, D-glucarate and D-glycerate utilization.
Interaction partners:
Sequence:
MAGWHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRVVDIDDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSRLMHLLAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRGDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQLDEER
Protein: Microtubule-associated protein 1 light chain 3 alpha (Autophagy-related protein LC3 A) (Autophagy-related ubiquitin-like modifier LC3 A) (MAP1 light chain 3-like protein 1) (Microtubule-associated proteins 1A/1B light chain 3A) (MAP1A/MAP1B LC3 A) (MAP1A/MAP1B light chain 3 A) (Q91VR7)
Organism: Mus musculus (Mouse)
Function: Ubiquitin-like modifier involved in formation of autophagosomal vacuoles (autophagosomes). While LC3s are involved in elongation of the phagophore membrane, the GABARAP/GATE-16 subfamily is essential for a later stage in autophagosome maturation. Through its interaction with the reticulophagy receptor TEX264, participates in the remodeling of subdomains of the endoplasmic reticulum into autophagosomes upon nutrient stress, which then fuse with lysosomes for endoplasmic reticulum turnover.
Subcellular location: Endomembrane system {ECO:0000269|PubMed:14530254}; Lipid-anchor {ECO:0000250|UniProtKB:Q9H492}. Cytoplasmic vesicle, autophagosome membrane {ECO:0000269|PubMed:11266458, ECO:0000269|PubMed:12207896}; Lipid-anchor {ECO:0000250|UniProtKB:Q9H492}. Cytoplasmic vesicle, autophagosome {ECO:0000250|UniProtKB:Q9H492}. Cytoplasm, cytoskeleton {ECO:0000305|PubMed:14530254}. Note=LC3-II binds to the autophagic membranes. {ECO:0000250|UniProtKB:Q9H492}.
Interaction partners:
- Sequestosome-1
- Ubiquitin-like modifier-activating enzyme ATG7
- Ubiquitin-like-conjugating enzyme ATG3
- Peptidyl-prolyl cis-trans isomerase FKBP8
- Autophagy protein 5
- FUN14 domain-containing protein 1
- Microtubule-associated protein 1 light chain 3 beta
- FYVE and coiled-coil domain-containing protein 1
- Cysteine protease ATG4B
- Microtubule-associated protein 1B
Sequence:
MPSDRPFKQRRSFADRCKEVQQIRDQHPSKIPVIIERYKGEKQLPVLDKTKFLVPDHVNMSELVKIIRRRLQLNPTQAFFLLVNQHSMVSVSTPIADIYEQEKDEDGFLYMVYASQETFGF
Protein: Trafficking protein particle complex subunit 20 (TRAPP subunit 20) (Transport protein particle 20 kDa subunit) (P38334)
Organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Function: Component of the TRAPP I, TRAPP II and TRAPP III complexes which act as guanine nucleotide exchange factors (GEF) for YPT1. TRAPP I plays a key role in the late stages of endoplasmic reticulum to Golgi traffic. TRAPP II plays a role in intra-Golgi transport. TRAPP III plays a role in autophagosome formation.
Subcellular location: Golgi apparatus, cis-Golgi network. Endoplasmic reticulum. Preautophagosomal structure.
Interaction partners:
- Trafficking protein particle complex III-specific subunit 85
- Trafficking protein particle complex subunit 33
- TRAPP-associated protein TCA17
- Trafficking protein particle complex II-specific subunit 65
- Trafficking protein particle complex subunit BET5
- Trafficking protein particle complex II-specific subunit 120
- Trafficking protein particle complex II-specific subunit 130
- Trafficking protein particle complex subunit 23
- Trafficking protein particle complex subunit 31
- Trafficking protein particle complex subunit BET3
Sequence:
MPQYFAIIGKKDNPVYEIEFTNAENPQGFPQDLKELNPFILHASLDIVEDLQWQINPTSQLNGNGGNGSNGGGGFLRSRAVNNTDNCYLGKVDHFYGLAITAYISYSGMKFVMIHGNSANSSVVIDDNNMRSFYQEVHELYVKTLMNPFYKITDPIRSPAFDSRVRTLARKHLSK
Protein: M-phase inducer phosphatase 1 (EC 3.1.3.48) (Dual specificity phosphatase Cdc25A) (P48964)
Organism: Mus musculus (Mouse)
Function: Tyrosine protein phosphatase which functions as a dosage-dependent inducer of mitotic progression. Directly dephosphorylates CDK1 and stimulates its kinase activity. Also dephosphorylates CDK2 in complex with cyclin E, in vitro (By similarity). Phosphorylation by PIM1 leads to an increase in phosphatase activity (By similarity).
Interaction partners:
- Serine/threonine-protein kinase Chk1
- Cyclin-dependent kinase 2
- Cyclin-dependent kinase 1
- Serine/threonine-protein kinase Chk2
- G1/S-specific cyclin-E1
- G1/S-specific cyclin-E2
- Cyclin-dependent kinase 4
- Serine/threonine-protein kinase PLK1
- G2/mitotic-specific cyclin-B1
- Cyclin-dependent kinase 6
Sequence:
MELGPEPPHRRRLFFACSPTPAPQPTGKMLFGASAAGGLSPVTNLTVTMDQLEGLGSDCEKMEVRNNSSLQRMGSSESTDSGFCLDSPGPLDSKENLEISLTRINSLPQKLLGCSPALKRSHSDSLDHDTFHLIDQDENKENEAFEFKKPIRPASRHIYEESKDPFTHRQNSAPARMLSSNESESGNFSPLFIPQSPVKATLSDEDDGFIDLLDGENMKNDEETPSCMASLWTAPLVMRRPANLADRCGLFDSPSPCGSSTRAVLKRADRSHEEPPRGTKRRKSVPSPVKAKADVPEPAQLPSQSLSLMSSPKGTIENILDSDPRDLIGDFSKGYLFNTVSGKHQDLKYISPEIMASVLNGKFAGLIKEFVIIDCRYPYEYEGGHIKGAVNLHMEEEVEDFLLKNPIVPTDGKRVIVVFHCEFSSERGPRMCRYVRERDRLGNEYPKLHYPELYVLKGGYKEFFLKCQSHCEPPSYRPMHHEDFKEDLKKFRTKSRTWAGEKSKREMYSRLKKL
Protein: Motile sperm domain-containing protein 2 (Q8NHP6)
Organism: Homo sapiens (Human)
Function: Endoplasmic reticulum-anchored receptor which modulates interorganelle contacts by interacting with other organelle-bound proteins via their FFAT motif. Might have a more important role in endoplasmic reticulum and endosomes contacts. Promotes migration of primary monocytes and neutrophils, in response to various chemokines.
Subcellular location: Endoplasmic reticulum membrane {ECO:0000269|PubMed:28137892, ECO:0000269|PubMed:29858488, ECO:0000269|PubMed:35389430}; Single-pass type IV membrane protein {ECO:0000269|PubMed:29858488}. Note=Localization to contact sites involving the endoplasmic reticulum and several organelles is regulated by interaction with proteins containing FFAT motif (PubMed:29858488). Dynamically distributes between specific subdomains of the endoplasmic reticulum (ER): ER membranes in contact with lipid droplets (LDs) and the remainder of the ER (PubMed:35389430). {ECO:0000269|PubMed:29858488, ECO:0000269|PubMed:35389430}.
Interaction partners:
- StAR-related lipid transfer protein 3
- Oxysterol-binding protein-related protein 1
- Regulator of microtubule dynamics protein 3
- Oxysterol-binding protein 1
- Vesicle-associated membrane protein-associated protein A
- Motile sperm domain-containing protein 1
- STARD3 N-terminal-like protein
Sequence:
MAENHAQNKAKLISETRRRFEAEYVTDKSDKYDARDVERLQQDDNWVESYLSWRHNIVDETLKMLDESFQWRKEISVNDLNESSIPRWLLEIGVIYLHGYDKEGNKLFWIRVKYHVKDQKTILDKKKLIAFWLERYAKRENGKPVTVMFDLSETGINSIDMDFVRFIINCFKVYYPKYLSKIVIFDMPWLMNAAFKIVKTWLGPEAVSLLKFTSKNEVQDYVSVEYLPPHMGGTDPFKYSYPPLVDDDFQTPLCENGPITSEDETSSKEDIESDGKETLETISNEEQTPLLKKINPTESTSKAEENEKVDSKVKAFKKPLSVFKGPLLHISPAEELYFGSTESGEKKTLIVLTNVTKNIVAFKVRTTAPEKYRVKPSNSSCDPGASVDIVVSPHGGLTVSAQDRFLIMAAEMEQSSGTGPAELTQFWKEVPRNKVMEHRLRCHTVESSKPNTLTLKDNAFNMSDKTSEDICLQLSRLLESNRKLEDQVQRCIWFQQLLLSLTMLLLAFVTSFFYLLYS
Protein: Protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic (ABC transporter I family member 13) (ABC transporter ABCI.13) (AtABCI13) (Non-intrinsic ABC protein 11) (AtNAP11) (Q9AT00)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: ATPase transporter involved in lipid transfer from the endoplasmic reticulum (ER) to plastids, and necessary for thylakoids formation. Not involved in transition metal transport pathways.
Subcellular location: Plastid, chloroplast stroma {ECO:0000269|PubMed:17938172, ECO:0000269|PubMed:18431481}.
Interaction partners:
- Protein TRIGALACTOSYLDIACYLGLYCEROL 2, chloroplastic
- Protein TRIGALACTOSYLDIACYLGLYCEROL 1, chloroplastic
- ABC transporter I family member 6, chloroplastic
- Protein TRIGALACTOSYLDIACYLGLYCEROL 4, chloroplastic
- Protein TRIGALACTOSYLDIACYLGLYCEROL 5
- Protein ABCI7, chloroplastic
- ABC transporter I family member 19
- ABC transporter I family member 20
- ABC transporter I family member 21
- Iron-sulfur cluster assembly SufBD family protein ABCI8, chloroplastic
Sequence:
MLSLSCSSSSSSLLPPSLHYHGSSSVQSIVVPRRSLISFRRKVSCCCIAPPQNLDNDATKFDSLTKSGGGMCKERGLENDSDVLIECRDVYKSFGEKHILKGVSFKIRHGEAVGVIGPSGTGKSTILKIMAGLLAPDKGEVYIRGKKRAGLISDEEISGLRIGLVFQSAALFDSLSVRENVGFLLYERSKMSENQISELVTQTLAAVGLKGVENRLPSELSGGMKKRVALARSLIFDTTKEVIEPEVLLYDEPTAGLDPIASTVVEDLIRSVHMTDEDAVGKPGKIASYLVVTHQHSTIQRAVDRLLFLYEGKIVWQGMTHEFTTSTNPIVQQFATGSLDGPIRY
Protein: Always early (Q2PNN3)
Organism: Drosophila melanogaster (Fruit fly)
Subcellular location: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
Interaction partners:
Sequence:
MSRHQLKKPRKMVAAWQNDELFIKRPNFAPRIRISEKPEIQGRVKPGVASKRTENFTKKPSKISVDVSEDEKAKEKEKEQDPYSNDFILGKRLYNFLKYLSSHRWIWCEFVDSFLDKPTLTMGYDMKRFIAEYCPLLHSCFMPRRGWQLVRRNMGKARRFSAAFIELEREELECQRRIVRQLQQHKFNPKENVGYLDQIPKRVPLPLAKDATVSSFLHGNSFEGIVNGTVMGYDPQDYTYLVRFNRNDNAVVLSLPDSQLYSDEETAAVPLSIIMRGNKSSSVISESAKTEKFGNKRYTKELLESVLRVGKLQDVKHKILMDLARMNEDFETFKEIGSSSSRRDAKVTPQRENLQRRYSASMITLHRVNADILEPLRILHDYLVEYQKQDEEEESXRGRPASEVYQKCRMQAEQDLKTAADEKFLKIESDRTQEFVRNLHTILYLNGKLGRENSSNLETIIADLVTHMVDNIQPSLGRKLKDGVDSLEPLRQQVVQIFKDVKKPERFQITQQAPMQTEDGIYNFVVEAQPDTPS
Protein: Claudin-9 (Q9Z0S7)
Organism: Mus musculus (Mouse)
Function: Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity.
Subcellular location: Cell junction, tight junction. Cell membrane {ECO:0000250|UniProtKB:O95484}; Multi-pass membrane protein {ECO:0000255}.
Interaction partners:
- Tight junction protein 1
- Claudin-6
- Occludin
- Tight junction protein ZO-3
- Claudin-1
- Claudin-14
- Claudin-8
- Claudin-16
- Claudin-11
- Tight junction protein 2
Sequence:
MASTGLELLGMTLAVLGWLGTLVSCALPLWKVTAFIGNSIVVAQVVWEGLWMSCVVQSTGQMQCKVYDSLLALPQDLQAARALCVVALLLALLGLLVAITGAQCTTCVEDEGAKARIVLTAGVLLLLSGILVLIPVCWTAHAIIQDFYNPLVAEALKRELGASLYLGWAAAALLMLGGGLLCCTCPPSHFERPRGPRLGYSIPSRSGASGLDKRDYV
Protein: Acetyl- and succinyl-CoA transferase Rv0802c (EC 2.8.1.-) (P9WQG7)
Organism: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Function: May function as a succinyl-CoA transferase.
Interaction partners:
- Phosphoribosylformylglycinamidine synthase subunit PurL
Sequence:
MSRHWPLFDLRITTPRLQLQLPTEELCDQLIDTILEGVHDPDRMPFSVPWTRASREDLPFNTLSHLWQQLAGFKRDDWSLPLAVLVDGRAVGVQALSSKDFPITRQVDSGSWLGLRYQGHGYGTEMRAAVLYFAFAELEAQVATSRSFVDNPASIAVSRRNGYRDNGLDRVAREGAMAEALLFRLTRDDWQRHRTVEVRVDGFDRCRPLFGPLEPPRY
Protein: Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) (A8MQQ8)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Interaction partners:
Sequence:
MELLSSSPAQLLRPNLSSRALLPPRTSIASSHPPPPRFLVMNSQSQHRPSISCASPPPGDNGFPAITTASPIESARIGEVKRETKETNVSVKINLDGHGVSDSSTGIPFLDHMLDQLASHGLFDVHVRATGDTHIDDHHTNEDVALAIGTALLKALGERKGINRFGDFTAPLDEALIHVSLDLSGRPYLGYNLEIPTQRVGTYDTQLVEHFFQSLVNTSGMTLHIRQLAGKNSHHIIEATFKAFARALRQATESDPRRGGTIPRFDFDTHYTSHSSSTIYLQRFMITKSNLERSKLWLERLYVIRKQV
Protein: DNA-directed RNA polymerases I and III subunit RPAC1 (A0A2R8YEY5)
Organism: Homo sapiens (Human)
Subcellular location: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
Interaction partners:
Sequence:
MDENSLEFDMVGIDAAIANAFRRILLAEVPTMAVEKVLVYNNTSIVQDEILAHRLGLIPIHADPRLFEYRNQGDEEGTEIDTLQFRLQVRCTRNPHAAKDSSDPNELYVNHKVYTRHMTWIPLGNQADLFPEGTIRPVHDDILIAQLRPGQEIDLLMHCVKGIGKDHAKFSPVATASYRLLPDITLLEPVEGEAAEELSRCFSPGVIEVQEVQGKKVARVANPRLDTFSREIFRNEKLKKVVRLARVRDHYIFSVESTGVLPPDVLVSEAIKVLMGKCRRFLDELDAVQMD
Protein: Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12) (Q386W6)
Organism: Trypanosoma brucei brucei (strain 927/4 GUTat10.1)
Interaction partners:
- Polyubiquitin, putative
Sequence:
MSFFQLDWECSYQEYMKMIYHHATNYVPPRVSQERHLITCRELLNEAQRECKGGKYDLSFFHYLRCVEILTKVGIPSTYKDSMVLKKQCMDAIEALMNGALKNHYEKMVEELNSKKEGVDVLSVGDPSVVNVNNEEAEHLKRREVLLKNERGTLDSWRGEIGETRIPYNQIYNTTVDYQYWNRDVAATVASDGVVVPPRSIPCASPNAYCKWTYNSSFQGKWNPRRGMVNLGNTCYLNSVVQTLVSTPLGAYFLGDKYTLDVSTAGRQTCRLVNSFTFIVRELNRRDCAAPVSPSPFKKAMGEVNEAFSGFGQQDANEFLRVLLEGIHDGLNDRRTVKAVPSDADTIEFSDAELAKRHWEQYTQQNNSVVVDNCAFQERSSIMCLVCRRISRSFTCSLGIDVPIPAGTGNICLEDCFRLYCKEEELDLDSAYHCPSCKQKVKVSKQLLLYSLPTLLFVTIKRFRSDGAISMKLNDPVFFQKKIDLKPFLCSTEKNTIYDLVGVVNHSGSTTGGHYTADYYDNHCGWSSASDERVSRADKPDYRLVYILCYVRSA
Protein: Large ribosomal subunit protein bL12cx (50S ribosomal protein L12-3, chloroplastic) (CL12-C) (P36212)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Subcellular location: Plastid, chloroplast.
Interaction partners:
- Large ribosomal subunit protein bL9c
- Large ribosomal subunit protein bL28c
- Large ribosomal subunit protein uL4c
- 50S ribosomal protein L33
- Translation elongation factor EF1B/ribosomal protein S6 family protein
- Large ribosomal subunit protein uL15c
- Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain-containing protein
- Large ribosomal subunit protein bL31c
- Large ribosomal subunit protein bL17c
- Large ribosomal subunit protein bL21c
Sequence:
MASTTLSIATTIRSSSPLTSASTHHFLSKPTAIEFPFRLSSSSSHRAINLRPISAVEAPEKIEKIGSEISSLTLEEARILVDYLQDKFGVSPLSLAPAAAAVAAPADGGAAAVVEEQTEFDVVINEVPSSSRIAVIKAVRALTSLALKEAKELIEGLPKKFKEGITKDEAEEAKKTLEEAGAKVSIA
Protein: Two-component response regulator EHD1 (Protein EARLY HEADING DATE 1) (Q7Y0W3)
Organism: Oryza sativa subsp. indica (Rice)
Function: Transcriptional activator that acts as floral inducer to promote short-day (SD) flowering pathway. Activates Hd3a and other FT-like genes independently from Hd1. May also activate MADS-box transcription factors involved in flowering regulation.
Subcellular location: Nucleus {ECO:0000255|PROSITE-ProRule:PRU00625}.
Interaction partners:
Sequence:
MDHRELWPYGLRVLVIDDDCSYLSVMEDLLLKCSYKVTTYKNVREAVPFILDNPQIVDLVISDAFFPTEDGLLILQEVTSKFGIPTVIMASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGHPPSILAMARATPATTRSTATEASLAPLENEVRDDMVNYNGEITDIRDLGKSRLTWTTQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKKSIPTTSKHGATLSSTALDKTQDHPSRSQYFNQDGCMEIMDYSLPRDDLSSGSECMLEELNDYSSEGFQDFRWDSDKQEYGPCFWNF