wanglab/gogpt-training-data huggingface dataset:
Protein: Probable octanoyltransferase (EC 2.3.1.181) (Lipoate biosynthesis protein) (Lipoate-protein ligase) (Lipoyl ligase) (Lipoyl/octanoyl transferase) (Octanoyl-[acyl-carrier-protein]-protein N-octanoyltransferase) (O36017)
Organism: Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Function: Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate (By similarity).
Interaction partners:
- Lipoyl synthase, mitochondrial
- Putative glycine cleavage system H protein, mitochondrial
- Putative lipoate-protein ligase A
- Putative hydrolase C777.06c
- Hydroxyacyl-thioester dehydratase type 2, mitochondrial
- Protein arginine methyltransferase NDUFAF7 homolog, mitochondrial
- Probable pyruvate dehydrogenase protein X component, mitochondrial
- Putative acyl carrier protein, mitochondrial
- Enoyl-[acyl-carrier-protein] reductase, mitochondrial
- Putative 3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial
Sequence:
MNKIQHISFITKKNPLVSYERVGALQNRFVQHYLNYKANKVEQPPKPTIITSQVCPVYTLGRRESSINFTKGFPKAKVVKALRGGQTTFHGPGQILAYPIIDLKSFGLSPREYVSRLEQAIIATCKSFGIEKAHTTKNTGVWVTENDKIAAIGIHLRRNITSHGLALNVSTDLKYFNYIVGCGLYGKNTTSFKDQGVFTDLKSVEKVLVNNLDSFLMSK
Protein: Plexin D1 (Plexin-D1 precursor) (Q6DSU3)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Subcellular location: Cell membrane {ECO:0000256|ARBA:ARBA00004162}; Single-pass membrane protein {ECO:0000256|ARBA:ARBA00004162}.
Interaction partners:
Sequence:
MPPSAADRRSALALLSALLLAALQTRSAGALHVQQAFATPGRTNNFALDAASGRVYLAAVNNLYQLNATLALEVEMRTGPVLDNPLCHAPQLPQATCEHQKTLTDNHNKLLALDRAQDVLLACGSVYQGFCELRRLENVSRLAVQFPQDGATVFPSMLNIAANHENASTVGLVFRTHGGSPRLLVGATYTGMGTEYFPKNHSKEDLRFENTPEIAIRALDTRELGRLFTYDINPSEDNVFKIKQEVKQKNKLSFVHAFALGNYSYIAFNNDANSGLKESQPNSVLARICLDTDAPRRAAESRKLTESYAQMGLRCGTYTRLLSVSPAELRAETFLFAVFGRADGRAAVCVFRVAEVEEMIRQGRRNCSHGPNSDVQVLDSVIQGSGAECEGKGSIMLQLQTDQLNCGAAHLQHPLALRRPLRARPLYEAQGLSSVAVDSAHNHTLMFLGSRGRLHKVSLHSNFSVSQQWSLRLPANEPVHHIMTFDPSDRTYLYVMTSHHLLRVRVSSCEQYSSCGDCLSAGDPHCGWCTLERRCSVQQDCSSVSLSRSWISISEGVQQCPSMTITPAEISRSAEMRDVGILVAGSVPDLQGLRVECDYGMGISTNATVHLDYGTSHIQTCPLPPAHTLPTIPSGTDHVTVPVSINANGVSVVSGRFIIYDCERTGQIHSTTACTSCLSSAWRCFWDPQLHQCVSSKNNTQQLLQNSSSCPSMVAYEVPPLPTGSSPVFSLELKNVEHGTALECVYSDGQQYRAQWLDGPWVNCSGATLKTTQWSESFSLNLRRAGDATYIDNPQRMTVEVYSCSAGVSDCSQCLGRAALGQECVWCEHICRQQDQCPTTSSARCPAPLIHKIEPLSGPLTGGTLLTVTGKNLGHRADQLSVSIGGVTCHTLPQQYTVSIRLVCETDASLEQMSGQVTVGVAGDAVGVSKEQFSFVEPRLLRFSPAQGPLAGGTTLTIQGQFLDAGSTTDIQINNTHTCSIRTRSSEIIRCVMPAAASAENVSVCVVFDGRPCVSASPNFTFSYQKNPTISHIWPSRSYISGGRSISVSGVGFDLVQSVVMEVPGVGQTNCSCVSSTLILCQSPAADQAQQTAVLFSLNGVQYRDAASAGLEEGEQPHTQRYSFQYVEDPQFYTANKEKLIKHHPGEPLILIINKGPSDLDLTLDEYSVTIGSDLCDITFHNQQLFHCSINRSLSASTGELPVTVRVGHFQKVIAMVQMGGGSELAIVVSIVVCCVLLLLCTVALVVYCTKSRRAERYWQKTLVQMEEMESQIRDEIRKGFAELQTDMTDLTKELSRTQGIPFLEYKQFVTRTFFPKMCCDYERRLVQPVYENDPLGPRAHSETHPLLQDWQPAGSVRPNLEEGITLFSTLLNNKHFLVTFVHALEQQRDFAVRDRCNLASLLTIALHGKLEYYTSIMKDLLVDLIDASATKNPKLMLRRTESVVEKMLTNWMSICMYSYLKETVGEPFFLLLCAIKQQINKGSIDVLTGKARYTLNEEWLLRENIEAKPQNVMVSFQGLGMDSVCVRVMNSDTICQVKEKILEAFYKNLPYSQWPREEDVELEWFPEGRSSRILQDLDDSSVMEDGRKKLNTVFHYQIPDGASLAMSLKDKRENTLGRVKDLDTEKYVHLVLPHDELMESRKTHRQSQRKKVLPEIYLTRLLSTKGTLQKFLDDLFQAILSVPAENPPLAIKYFFDFLEEQADKRGITDPDTLHIWKTNSLPLRFWVNILKNPQFVFDIEKTDHMDACLSVIAQAFIDACSLSDLQLGKDSPTNKLLYAKEIPEYKKRVQSFYRQIQELPALSEQEMNTHLAEESRKHRNEFNTTLALTEVYKYAKRYRAQVASALDSNPTARRTQLQHKFEQVIALVEDNIYECSSEA
Protein: Autophagy-related 8a, isoform C (X2JEE0)
Organism: Drosophila melanogaster (Fruit fly)
Subcellular location: Membrane {ECO:0000256|ARBA:ARBA00004370}.
Interaction partners:
Sequence:
MCMCFCIMNKKKQMIQVIVEKAPKARIGDLDKKKYLVPSDLTVGQFYFLIRKRIHLRPEDALFFFVNNVIPPTSATMGSLYQEHHEEDYFLYIAYSDENVYGMAKIN
Protein: RNA polymerase II elongation factor ELL3 (Q80VR2)
Organism: Mus musculus (Mouse)
Function: Enhancer-binding elongation factor that specifically binds enhancers in embryonic stem cells (ES cells), marks them, and is required for their future activation during stem cell specification. Elongation factor component of the super elongation complex (SEC), a complex required to increase the catalytic rate of RNA polymerase II transcription by suppressing transient pausing by the polymerase at multiple sites along the DNA. Component of the little elongation complex (LEC), a complex required to regulate small nuclear RNA (snRNA) gene transcription by RNA polymerase II and III. Does not only bind to enhancer regions of active genes, but also marks the enhancers that are in a poised or inactive state in ES cells and is required for establishing proper RNA polymerase II occupancy at developmentally regulated genes in a cohesin-dependent manner. Probably required for priming developmentally regulated genes for later recruitment of the super elongation complex (SEC), for transcriptional activation during differentiation. Required for recruitment of P-TEFb within SEC during differentiation. Probably preloaded on germ cell chromatin, suggesting that it may prime gene activation by marking enhancers as early as in the germ cells. Promoting epithelial-mesenchymal transition (EMT).
Subcellular location: Nucleus {ECO:0000269|PubMed:23273992}.
Interaction partners:
- AF4/FMR2 family member 1
- AF4/FMR2 family member 4
- ELL-associated factor 1
- Protein AF-9
- Btk-PH-domain binding protein translocated to, 1)
- ELL-associated factor 2
- Cyclin-dependent kinase 9
- Cyclin-T1
- Cyclin-T2
- RNA polymerase II elongation factor ELL
Sequence:
MEGTQEALSGKMRLLFTPAARTSLLMLRLNEAALRALQECQQQQVRPVIAFQGHRGYLRFPGPGWSCLFSFIVSQCGQEGTNGGLDLVYQRLGRSGPNCLHCLGSLRERLTIWAAMDTIPAPLLAQEHLTEGTRESESWQDTGDEPEGHPQLAPDEVSDPLASHHEQSLPGSSSEPMAQWEMRNHTYLPSREPDQSLLSPASQKRLDKKRSAPITTEEPEEKRLRALPLASSPLQGLANQDSQEGEDWGQDEDEEGDEDGDSRLEQSLSAPSASESPSPEEVPDYLLQYRAIHSTEQQQAYEQDFETDYAEYRILHARVGAASQRFTELGAEIKRLQRGTPEHKVLEDKIVQEYKKFRKRYPSYREEKHRCEYLHQKLSHIKGLILEFEEKNRGS
Protein: CBFD_NFYB_HMF domain-containing protein (Q20317)
Organism: Caenorhabditis elegans
Interaction partners:
Sequence:
MMSSGPLDPSDVTLFTSYPSPIVVPLEFIEEQSKSSREELEIDESGLYIMSKALEEFMRTVMRGATQNGSRLLDYDSIAEFFANSEFRALKDFFPERVRFDEIESEILPTRATGPSNSS
Protein: Transcription factor ALC (Basic helix-loop-helix protein 73) (AtbHLH73) (bHLH 73) (Protein ALCATRAZ) (Transcription factor EN 98) (bHLH transcription factor bHLH073) (Q9FHA2)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Required for the dehiscence of fruit, especially for the separation of the valve cells from the replum. Promotes the differentiation of a strip of labile nonlignified cells sandwiched between layers of lignified cells.
Subcellular location: Nucleus {ECO:0000255|PROSITE-ProRule:PRU00981}.
Interaction partners:
- Alkaline-phosphatase-like family protein
- GPI ethanolamine phosphate transferase 2
- Haloacid dehalogenase-like hydrolase domain-containing protein Sgpp
- Ankyrin repeat family protein
- Ankyrin repeat family protein
- GPI ethanolamine phosphate transferase 3
- Protein trichome birefringence-like 43
- Alkaline-phosphatase-like family protein
- Probable aldo-keto reductase 2
- Vesicle-associated protein 4-1
Sequence:
MGDSDVGDRLPPPSSSDELSSFLRQILSRTPTAQPSSPPKSTNVSSAETFFPSVSGGAVSSVGYGVSETGQDKYAFEHKRSGAKQRNSLKRNIDAQFHNLSEKKRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYLKQLQLQVQTLAVMNGLGLNPMRLPQVPPPTHTRINETLEQDLNLETLLAAPHSLEPAKTSQGMCFSTATLL
Protein: Probable fumarate hydratase, mitochondrial (Fumarase) (EC 4.2.1.2) (O17214)
Organism: Caenorhabditis elegans
Function: Catalyzes the reversible stereospecific interconversion of fumarate to L-malate. In mitochondrion, catalyzes the hydration of fumarate to L-malate in the tricarboxylic acid (TCA) cycle to facilitate a transition step in the production of energy in the form of NADH.
Subcellular location: Mitochondrion matrix {ECO:0000250|UniProtKB:P08417}. Cytoplasm {ECO:0000250|UniProtKB:P08417}.
Interaction partners:
- Succinate dehydrogenase flavoprotein subunit, mitochondrial
- Malic enzyme
- Succinate dehydrogenase iron-sulfur subunit, mitochondrial
- Succinate dehydrogenase flavoprotein subunit, mitochondrial
- Succinate dehydrogenase cytochrome b560 subunit
- Malate dehydrogenase, cytoplasmic
- Malate dehydrogenase, mitochondrial
- Putative succinate dehydrogenase cytochrome b small subunit, mitochondrial
- Bifunctional glyoxylate cycle protein
- Probable citrate synthase, mitochondrial
Sequence:
MSAVSMLQGEMLARGGAVIARGASLATARNFSRTTVPMAKIRKERDTFGELEVPADKYYGAQTARSQMNFKIGGPEERMPIPVIHAFGILKKAAALVNTEFGLDKKLADAISQAADEVVDGKLDEHFPLVTWQTGSGTQSNMNVNEVISNRAIEILGGELGSKKPVHPNDHVNMSQSSNDTFPTAMHIAVGREVNSRLLPALKKLRTALHNKAEEFKDIIKIGRTHTQDAVPLTLGQEFSAYVTQLDNSIARVESTLPRLYQLAAGGTAVGTGLNTRKGFAEKVAATVSELTGLPFVTAPNKFEALAAHDALVEVHGALNTVAVSFMKIGNDIRFLGSGPRCGLGELSLPENEPGSSIMPGKVNPTQCEAITMVAAQVMGNQVAVSVGGSNGHFELNVFKPLIVRNVLQSTRLLADSAVSFTDHCVDGIVANKDNIAKIMRESLMLVTALNPHIGYDNAAKIAKTAHKNGTTLVQEAVKLGILTEEQFAQWVKPENMLGPK
Protein: ATPase with bromodomain protein abo2 (EC 3.6.1.-) (ATPase family AAA domain-containing protein abo2) (AAA-ATPase) (Q9C0W2)
Organism: Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Function: Probable ATPase which may play a role in nucleosome organization.
Subcellular location: Nucleus {ECO:0000269|PubMed:16823372}.
Interaction partners:
- 26S proteasome regulatory subunit rpn10
- 26S proteasome regulatory subunit rpn7
- Glycerol-3-phosphate dehydrogenase, mitochondrial
- 26S proteasome regulatory subunit rpn2
- Probable 26S proteasome regulatory subunit rpn3
- 26S proteasome regulatory subunit rpn1
- Probable 26S proteasome regulatory subunit rpn6
- Probable 26S proteasome regulatory subunit rpn9
- 26S proteasome regulatory subunit rpn12
- Probable proteasome subunit alpha type-2
Sequence:
MRRRARSIRFSSDDNEDNEEDDDYYSNAHSEKSEDHSNHIKVSHFDPSSYKQKLVSVRETQRNRKFSSLQKHLNTETPSFSVSIENPSKPSAAFNDASLGKKSTEHQIDGIRNGSSNLQMEGNDKELDTDNNEDESTTFKDEEDDLISPKSYLTSSKTFSYPKAPTESTNGDYLDEDYVDGQSDPESSNASDSDFADSPDDLTKVRSPIPSRRGRRKRKMRGPILPVKKNLRVKKAMSPLRAERNSPDFRRKLRSRDNRPNYHLFDYYNEIASSPNPSTTKITYNPPKLPMKDFATLPIGYQSTCDSDETSELSSTSSEQTSDVEGLNAYNNLGASSDIENAPSSQLHFGHIDEKTIRSTDPFANRENLDFNSIGGLEDIILQLKEMVMLPLLYPEVFLHLHITPPRGVLFHGPPGTGKTLMARVLAANCSTKNQKISFFLRKGSDCLSKWVGEAERQLRLLFEEARRVQPSIIFFDEIDGLAPIRSSKQEQTHSSIVSTLLALMDGLDTRGQVVVIGATNRPNDLDPALRRPGRFDREFYFPLPNKQARMKILEINSLHFSPKIPESYLLHLAESTSGYGGADLKALCTEAALNAVRRTFPQIYTSSDKFLIDLNEISVSICDFVVASEKIAVSTRRSDVKPNIPITDSHKILFKKSIEVITSKIRRLLKLDVYLPTVESLQKLPAEELMRQKEINSLKTTMSFRPRLLITDIYGYGCTYLSKVLFSMLDGIHVQSLDISELLMDTTTSPRSLLTKIFSEARKNAPSIIFINNVEKWPSLFSHSFLSMFLLLLDSISPLEPVMLLGFANTNQEKLSSTVRSWFPSHRSEYHDLSFPDYSSRYSFFHYLLKRISFLPIHQKSAEAASVDILPKVLPVSKTSDLTDKVNRRQRKNDKKIKNKIQVKLSSILEMLRSRYKKFKKPIIDLNDIYIDESNERVVKGKSKDNFEYFLSGNTVTRKKDNACFKMMNFEEIERRLWSGRYCTPKEFLRDIKMIKQDAILSGDVNLKHKAKEMFAHAELNVDELIDAKLLYDCCQVSKREKAYKQLKQKKLNNAKDAHEMQESKNEETFVRNDVAQEDNFIELSSNEVRNVSNDEHKHTLFHGQSLTHNNLIAVTPPSRTGVEHKEENKKYDNVNIQKTLAKCAEEFAEHTNFNKVELLDFVYSKLSSTIWENREEHDLLKIVRDVRQTFFRSLEDMGV
Protein: Little elongation complex subunit 1 (Interactor of little elongator complex ELL subunit 1) (Q9W1R4)
Organism: Drosophila melanogaster (Fruit fly)
Function: Component of the little elongation complex (LEC), a complex required to regulate small nuclear RNA (snRNA) gene transcription by RNA polymerase II and III. Specifically acts as a scaffold protein that promotes the LEC complex formation and recruitment and RNA polymerase II occupancy at snRNA genes in subnuclear bodies.
Subcellular location: Nucleus {ECO:0000269|PubMed:22195968, ECO:0000269|PubMed:23932780}. Note=Associates to transcriptionally active chromatin at snRNA genes.
Interaction partners:
- Little elongation complex subunit 2
- Ell-associated factor Eaf
- Uncharacterized protein, isoform D
- RNA polymerase II elongation factor Ell
- AF4/FMR2 family member lilli
- Cyclin-T
- ENL/AF9-related, isoform B
- Cyclin-dependent kinase 9
- Transcription elongation factor SPT5
- SET domain binding factor, isoform A
Sequence:
MNLDEFSDFNIDQLLGPSAPLQDALVAPYKQVSLPRSNQDVYAKRSRLAERIAQNDELIRQVKQLQAQNKQLADLQRTAQEVTDLYQKEKQQRIELEKRTKQIGERCGQLEKELDVQVGNCENLQEQLQVRGLPVEAKDVLSILMQFSQRLGDDCGLLRRDQNIMKKLREHCKTIDVSVPTPKSPNSRSKRKAHQPGVNQSTQTDEEPADPKPALCSVAVQVEGLIETRNQATQHKNTTTTRGTTTASFIKHHDVGTCFPEPKPLPNIRQILDEMLSWRDDVVIEPMSPLSDLQQELQLEDVPTNASVATCTTLCDIHREIDFVTDLPTQIKVSASRPPSRTMLDSVKEEARSSRELAKELFNFLPQNQSCLTNLPPQAFEELWQVFGQMVLALLQRRSNPSMATPPSVSQADFTRWLYELYEGTENQTEQTSNGSTSKRDFATSTECMDTGTDPIIQSPNISHEGHVTPIRLPSKPKERKRKSKKRKAAATPKPIAKRKCLEMETNNELEVEREQTPETAIQFLSNLETFNMANCDNLEMELDEEELYLLQLTSNAKQNENKGNVRVQDPDDLKSPAQTSKFPKSENHLPAVLKETASSLKGYDEKQCPFPDKTEELMHKKTFEIQENIGSLTELPPNIDISAYPVSMAEVRIVSSNKPSEMEVNASEGTDSHLDKSVSNLDTGSMSLFGSDSDVESEYSIEQMAPELSDSDDTFDNSEEDCRSADEPSNSKKIRNSSLFGSESESDESEERALEADDLTEAEAKVEEKESEQKSSDVAPAASSGKLLVVEADLVTKTQPLFVEKLDLENTQHTSTCTNPKETDESEDEHGLVIDEQIFISQPEEPPLTVPIAAKRRRTQSELKTLSPPGEVRLTRQRAKQLLDEQKSGPEKGLSLVEQIRRQLKKAINKSEPFKKDSTHDSKKDSTHDLKPLEHEDELKAMQLGTNFEPIKLSCSISEESPASPPACEPMDELDPPPIEIPLEQAACTRKDDQHKSIVQHVLKMDTGLEKLVEANRKTLGKSQPQLCASIGKYLQENMQLESTCSDLAMDIYKVTKSEAVIVNAMITVICKIGLDDGPVERLLNALKYLNFSQRFLAELEERLFRNTKERPATELALNYVRLYLKATALQATMSAGYENPARLLLAKILYHFDQDMPPLVMEVLRQFPTALPHREQREYDNSDALITVIKHLLMNRQYDMQDPNGAERLLLSKLRFEYHFQPYEPSKQQVLENLVGKLKAGREEELGYAFALFCRRSPHLKVVESVVGEHLMPLATSYCDLAAQNELYDARLGLLLHCISLVLKPLPLDTDISAFVGFLKRLLVAVPRSGVQLAAVKASLRLQRFGFKYTLDALKDYRPNYELDPLTRAMIRCFAKRRRHFRHVAATGRRTEI
Protein: Transcription factor BHLH148 (Basic helix-loop-helix protein 148) (OsbHLH148) (bHLH transcription factor bHLH148) (Q75KV9)
Organism: Oryza sativa subsp. japonica (Rice)
Function: May act on an initial response of jasmonate-regulated gene expression toward drought tolerance as part of a BHLH148-TIFY11D/JAZ12-COI1A complex.
Subcellular location: Nucleus {ECO:0000255|PROSITE-ProRule:PRU00981}.
Interaction partners:
- Protein TIFY 3
- Protein TIFY 11d
Sequence:
MQMESYYGAFHADEAAFFFPHHVPASPELPFGLIASPEPEPEPEQAAAEARQSAFQEYGGAVHAGAPAAAGAVTTGGTNIHRRVMDVLGRMGGGGGGGEKGEGEEMEEEEEVPQRRRRGQGADVESSRGFRHMMRERQRREKLSQSYADLYAMVSSRSKGDKNSIVQSAAIYIHELKVARDQLQRRNEELKAQIMGHDEQQPCVTVQFEVDEPSSSIDSMIAALRRLKGMSVKARGIRSSMSGNRLWTEMNVETTIAACEVEKAVEEALKEVERNQPDSDAPFPGSKGWTQTSHVQNVF
Protein: UDP-glucose:glycoprotein glucosyltransferase 1 (UGT1) (hUGT1) (EC 2.4.1.-) (UDP--Glc:glycoprotein glucosyltransferase) (UDP-glucose ceramide glucosyltransferase-like 1) (Q9NYU2)
Organism: Homo sapiens (Human)
Function: Recognizes glycoproteins with minor folding defects. Reglucosylates single N-glycans near the misfolded part of the protein, thus providing quality control for protein folding in the endoplasmic reticulum. Reglucosylated proteins are recognized by calreticulin for recycling to the endoplasmic reticulum and refolding or degradation.
Subcellular location: Endoplasmic reticulum lumen {ECO:0000255|PROSITE-ProRule:PRU10138, ECO:0000269|PubMed:10694380}. Endoplasmic reticulum-Golgi intermediate compartment {ECO:0000255|PROSITE-ProRule:PRU10138, ECO:0000269|PubMed:10694380}.
Interaction partners:
- Selenoprotein F
- Endoplasmin
- Calnexin
- Glucoside xylosyltransferase 1
- UDP-glucose:glycoprotein glucosyltransferase 2
- Glucoside xylosyltransferase 2
- Mannosyl-oligosaccharide glucosidase
- ER degradation-enhancing alpha-mannosidase-like protein 1
- Calreticulin
- Protein disulfide-isomerase A4
Sequence:
MGCKGDASGACAAGALPVTGVCYKMGVLVVLTVLWLFSSVKADSKAITTSLTTKWFSTPLLLEASEFLAEDSQEKFWNFVEASQNIGSSDHDGTDYSYYHAILEAAFQFLSPLQQNLFKFCLSLRSYSATIQAFQQIAADEPPPEGCNSFFSVHGKKTCESDTLEALLLTASERPKPLLFKGDHRYPSSNPESPVVIFYSEIGSEEFSNFHRQLISKSNAGKINYVFRHYIFNPRKEPVYLSGYGVELAIKSTEYKAKDDTQVKGTEVNTTVIGENDPIDEVQGFLFGKLRDLHPDLEGQLKELRKHLVESTNEMAPLKVWQLQDLSFQTAARILASPVELALVVMKDLSQNFPTKARAITKTAVSSELRTEVEENQKYFKGTLGLQPGDSALFINGLHMDLDTQDIFSLFDVLRNEARVMEGLHRLGIEGLSLHNVLKLNIQPSEADYAVDIRSPAISWVNNLEVDSRYNSWPSSLQELLRPTFPGVIRQIRKNLHNMVFIVDPAHETTAELMNTAEMFLSNHIPLRIGFIFVVNDSEDVDGMQDAGVAVLRAYNYVAQEVDDYHAFQTLTHIYNKVRTGEKVKVEHVVSVLEKKYPYVEVNSILGIDSAYDRNRKEARGYYEQTGVGPLPVVLFNGMPFEREQLDPDELETITMHKILETTTFFQRAVYLGELPHDQDVVEYIMNQPNVVPRINSRILTAERDYLDLTASNNFFVDDYARFTILDSQGKTAAVANSMNYLTKKGMSSKEIYDDSFIRPVTFWIVGDFDSPSGRQLLYDAIKHQKSSNNVRISMINNPAKEISYENTQISRAIWAALQTQTSNAAKNFITKMAKEGAAEALAAGADIAEFSVGGMDFSLFKEVFESSKMDFILSHAVYCRDVLKLKKGQRAVISNGRIIGPLEDSELFNQDDFHLLENIILKTSGQKIKSHIQQLRVEEDVASDLVMKVDALLSAQPKGDPRIEYQFFEDRHSAIKLRPKEGETYFDVVAVVDPVTREAQRLAPLLLVLAQLINMNLRVFMNCQSKLSDMPLKSFYRYVLEPEISFTSDNSFAKGPIAKFLDMPQSPLFTLNLNTPESWMVESVRTPYDLDNIYLEEVDSVVAAEYELEYLLLEGHCYDITTGQPPRGLQFTLGTSANPVIVDTIVMANLGYFQLKANPGAWILRLRKGRSEDIYRIYSHDGTDSPPDADEVVIVLNNFKSKIIKVKVQKKADMVNEDLLSDGTSENESGFWDSFKWGFTGQKTEEVKQDKDDIINIFSVASGHLYERFLRIMMLSVLKNTKTPVKFWFLKNYLSPTFKEFIPYMANEYNFQYELVQYKWPRWLHQQTEKQRIIWGYKILFLDVLFPLVVDKFLFVDADQIVRTDLKELRDFNLDGAPYGYTPFCDSRREMDGYRFWKSGYWASHLAGRKYHISALYVVDLKKFRKIAAGDRLRGQYQGLSQDPNSLSNLDQDLPNNMIHQVPIKSLPQEWLWCETWCDDASKKRAKTIDLCNNPMTKEPKLEAAVRIVPEWQDYDQEIKQLQIRFQKEKETGALYKEKTKEPSREGPQKREEL
Protein: Chitin synthase (EC 2.4.1.16) (Chitin-UDP acetyl-glucosaminyl transferase) (Q8T5G8)
Organism: Meloidogyne artiellia (British root-knot nematode)
Function: Required for the synthesis of chitin.
Subcellular location: Cell membrane {ECO:0000305|PubMed:15777697}; Multi-pass membrane protein {ECO:0000255}.
Interaction partners:
Sequence:
MQYHQHQHQFPGPGPSHTSVYSSDGFSCSMESIPLPEHLQQRNPPMEEHYLQQTILPTRVPESTVAKAREIVLSHITSQEHLPWDTFRLLPPKADRHQKDTLYNGFLQVLKMITFVALFVTTLGSSILAKLSLLVMAAGLGQAGHNISICPDKIPESPKNSVLISPKNAAKWAWALLLAICIPELLCFARSLHRSLFRKVRGPSFLQFLLVFTVESVHAFGLGALVFAIMPRGMVITMLQLGNSLCLIPSLLLPLSRSRSRWLPLLLLLDGSAILAQSSAAIWRGSIPLERFGFVFLCTSLISIAWWQNFVHPHSFLPATRFFAHYAAKLRECRSKTFVVLSPWKCLIFTFCMFQFVPPQIPFRELLQKDPFGEKLVTINAYNLNQSQLNAFQERMENLERKAFHQQHPHIVHPLKLNRKIVENIANGEAALFRNGTRRPPKKEEVKKNKMDSKKKTKKLKKKKGGNNNATSTNSSEKTPTKGGVLPTKRERRTMAATGSNERVEADYSSNSDADEQEEEEENVAAYNIYDDRVELNQFTTANDALWLVFVQAGSVLLCQLCAKFACKVVMQRVGLALPVVLSIPFGILFLAYSCRQKATNPCHLSEWMSKELFWQCPTRPFHWQRFFREQPNLLWLCWWLSQCWITIHLWLPRQERLAKSEKLFVLGYIDAPFPEHSIALDRRRDDKIQIRSEDIDTEEEANEGGGEQEDGNSSTHTCESAASGLVVVEAPFPKHPNVGRPTAASICSNGSLSSGSHRSDDGGLIRELPSSADSVCKIYVCATMWHESALEMGCMLKSIFRLDKDQCARRNAQRYLKVVDPDYYVFEAHIYIDDAFELDENGNPHPNKFVHQLLEKMDEAASTKLQLRTPRICVTSYGGRISYVLPWRNRLSIHLKNKLLIRQRKRWSQVMYLYFLLGFRLMLRVHEQKRRELLAENTFILTLDGDVDFQPECVHLLVDLMRKNRRLGAACGRIHPRGSGLMVWYQKFEYAVGHWLQKATEHMIGCVLCSPGCFSLFRSSALIDDNVARKYATKSEKPFHYVQYDQGEDRWLCTLLLQRGYRVEYCAASDALTFAPEGFSEFFNQRRRWIPSTMANVIDLLRDYRNVVRVNDSVSIWYIAYQLVMLFSSVLGPGTIFLMIVGAISISFNIDTRLALLIVTTPVLCFCVCCLTCGTETQLLLAQVIGALFAMLMTAVIVGTSLQIQKDGLLSPHSIFLFTVLGSWSFSALLHPLEFGCLLPCGLYFLAIPCMYMLLPVYSLCNLNTVSWGTRENASVSSSSTGQFSGKREERGDILPHLQKTEDGELSVGCGNFCRVVCCVRNPSSPPCADETVEVRKLDENFRKIERKLQSLERRTNGQGNNAEEEGKEEEETGKSEQERKEGREEGKEEEGKMSKRKKEEMDLKGWMELEPFRRFEPIVLDTEEESFWREMIEKYLRPILPNSNEQARIQRGLNELRNTCCSAFFMVNIVFIIVVLVLQLQKDCLHIEWPLGPLVNQTRVQCGGGGGRDFEGEEWIMSRLQLEPMGFVFIVFFLIILFIQFLAMLFHRFGTFTHIIASTELCCAQRPLDKLSEEELVAQNAVEIVRELQAIRGIDSSLSRSEQFQQQPLQRQTRQHFPRTLSLGKRQQNAQIPPRCEKGGNERGEESPTSLPAPPVINWSEVHRNHQRVQPMEGGQQFDPRKDTLDAAFRQRFFALSSSSIAADHHQNNGGHLVDTTGTGHIGAAALPLTLNRRTLRALEQRRNILYQRGDRKRIPALNQQFHSIFPSSSESEGEEGEGGGRGRGREQERDKCLEGKKEKFRQRVEEGPARCHRLEELFGKSRKGGPQKRGKVNGENMKFLGTTNKRAK
Protein: Sialic acid-binding Ig-like lectin 5 (Siglec-5) (Sialic acid-binding Ig-like lectin F) (Siglec-F) (mSiglec-F) (CD antigen CD170) (Q920G3)
Organism: Mus musculus (Mouse)
Function: Putative adhesion molecule that mediates sialic-acid dependent binding to cells. Preferentially binds to alpha-2,3-linked sialic acid. The sialic acid recognition site may be masked by cis interactions with sialic acids on the same cell surface.
Subcellular location: Membrane; Single-pass type I membrane protein.
Interaction partners:
- Integrin alpha-M
- Adhesion G protein-coupled receptor E1
- Integrin alpha-X
- Lymphocyte antigen 6G
- Receptor-type tyrosine-protein phosphatase C
- Lymphocyte antigen 6C2
- Lymphocyte antigen 6 family member C1
- Mucin-2
- Interleukin-7 receptor subunit alpha
- High affinity immunoglobulin gamma Fc receptor I
Sequence:
MRWAWLLPLLWAGCLATDGYSLSVTGSVTVQEGLCVFVACQVQYPNSKGPVFGYWFREGANIFSGSPVATNDPQRSVLKEAQGRFYLMGKENSHNCSLDIRDAQKIDTGTYFFRLDGSVKYSFQKSMLSVLVIALTEVPNIQVTSTLVSGNSTKLLCSVPWACEQGTPPIFSWMSSALTSLGHRTTLSSELNLTPRPQDNGTNLTCQVNLPGTGVTVERTQQLSVIYAPQKMTIRVSWGDDTGTKVLQSGASLQIQEGESLSLVCMADSNPPAVLSWERPTQKPFQLSTPAELQLPRAELEDQGKYICQAQNSQGAQTASVSLSIRSLLQLLGPSCSFEGQGLHCSCSSRAWPAPSLRWRLGEGVLEGNSSNGSFTVKSSSAGQWANSSLILSMEFSSNHRLSCEAWSDNRVQRATILLVSGPKVSQAGKSETSRGTVLGAIWGAGLMALLAVCLCLIFFTVKVLRKKSALKVAATKGNHLAKNPASTINSASITSSNIALGYPIQGHLNEPGSQTQKEQPPLATVPDTQKDEPELHYASLSFQGPMPPKPQNTEAMKSVYTEIKIHKC
Protein: Protein TRANSPARENT TESTA GLABRA 1 (Q9XGN1)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: May regulate MYC transcription factors. Involved in epidermal cell fate specification such as trichome and root hair development, seed mucilage production, and anthocyanin biosynthesis by acting at the dihydroflavonol-4-reductase (DFR) step. Together with GL1 and GL3, promotes trichome formation. Activates the transcription of GL2.
Subcellular location: Cytoplasm.
Interaction partners:
- Transcription factor TT2
- Transcription factor EGL1
- Transcription factor TT8
- Transcription factor GLABRA 3
- Transcription factor MYB113
- Transcription factor MYB114
- Transcription factor MYB75
- Transcription factor WER
- Transcription factor MYB90
- Transcription factor MYC1
Sequence:
MDNSAPDSLSRSETAVTYDSPYPLYAMAFSSLRSSSGHRIAVGSFLEDYNNRIDILSFDSDSMTVKPLPNLSFEHPYPPTKLMFSPPSLRRPSSGDLLASSGDFLRLWEINEDSSTVEPISVLNNSKTSEFCAPLTSFDWNDVEPKRLGTCSIDTTCTIWDIEKSVVETQLIAHDKEVHDIAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRSPTMPVAELERHQASVNAIAWAPQSCKHICSGGDDTQALIWELPTVAGPNGIDPMSVYSAGSEINQLQWSSSQPDWIGIAFANKMQLLRV
Protein: Rho GTPase-activating protein 5 (Rho-type GTPase-activating protein 5) (Q6NKT5)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Acts as a GTPase activator for the Rac-type GTPase by converting it to an inactive GDP-bound state.
Subcellular location: Cell membrane {ECO:0000305|PubMed:22984069}; Peripheral membrane protein {ECO:0000305|PubMed:22984069}.
Interaction partners:
- Rho GTPase-activating protein 6
- non-specific serine/threonine protein kinase
- non-specific serine/threonine protein kinase
- Rac-like GTP-binding protein ARAC1
- Rop guanine nucleotide exchange factor 3
- CRIB domain-containing protein RIC2
- Protein IQ-DOMAIN 10
- Rac-like GTP-binding protein ARAC5
- Rop guanine nucleotide exchange factor 6
- Leucine-rich repeat receptor-like protein kinase PXC1
Sequence:
MDIGGPTNIRHVAHVTFDRFDGFLGLPSEFEPDVPRKAPSASATVFGVSTESMQLSYDSRGNCVPVILLLLQSRLYDQGGLQAEGVFRITGENSEEEFVREQLNKGIIPDGIDVHCLAGLIKAWFRELPRGVLDPLPSEQVMQCESDEDFVKVVRLLPQTEASLLNWAINLMADVIQFEHVNKMNSRNLALVFAPNMSQMADPLTALMYAVQVMKLLKSLTEKTVREREASSSVVDRRCSKEAEDGEKEKDNEEEEEDEEEEEEEEDEDEDEEEEGDGVYIIKEEEASEIIKVVADEHKSGSIKSEFEGSSATDSKGDNGVVQPPICSSNP
Protein: Pollen receptor-like kinase 6 (AtPRK6) (Q3E991)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Key receptor for sensing species-specific attractants in cooperation with other pollen receptor-like kinases. Essential for pollen tube reorientation toward attractant peptides.
Subcellular location: Cell membrane {ECO:0000269|PubMed:26961657}; Single-pass type I membrane protein {ECO:0000305}. Cytoplasmic granule {ECO:0000269|PubMed:26961657}. Note=Re-localizes asymmetrically to direct tip growth direction toward the attractant peptides. {ECO:0000269|PubMed:26961657}.
Interaction partners:
- Protein LURE 1.2
- Rop guanine nucleotide exchange factor 12
- Rho guanine nucleotide exchange factor 8
- Protein LURE 1.1
- Protein LURE 1.5
- Defensin-like protein 210
- Rac-like GTP-binding protein ARAC11
- Defensin-like protein 209
- Protein LURE 1.6
- Cysteine rich peptide
Sequence:
MAAAVLNPGFFLLILLLSFSISPSLQYVSESEPLVRFKNSVKITKGDLNSWREGTDPCSGKWFGIYCQKGLTVSGIHVTRLGLSGTITVDDLKDLPNLKTIRLDNNLLSGPLPHFFKLRGLKSLMLSNNSFSGEIRDDFFKDMSKLKRLFLDHNKFEGSIPSSITQLPQLEELHMQSNNLTGEIPPEFGSMKNLKVLDLSTNSLDGIVPQSIADKKNLAVNLTENEYLCGPVVDVGCENIELNDPQEGQPPSKPSSSVPETSNKAAINAIMVSISLLLLFFIIVGVIKRRNKKKNPDFRMLANNRENDVVEVRISESSSTTAKRSTDSSRKRGGHSDDGSTKKGVSNIGKGGNGGGGGALGGGMGDIIMVNTDKGSFGLPDLMKAAAEVLGNGSLGSAYKAVMTTGLSVVVKRIRDMNQLAREPFDVEMRRFGKLRHPNILTPLAYHYRREEKLVVSEYMPKSSLLYVLHGDRGIYHSELTWATRLKIIQGVAHGMKFLHEEFASYDLPHGNLKSSNVLLSETYEPLISDYAFLPLLQPSNASQALFAFKTPEFAQTQQVSHKSDVYCLGIIILEILTGKFPSQYLNNGKGGTDIVQWVQSSVAEQKEEELIDPEIVNNTESMRQMVELLRVGAACIASNPDERLDMREAVRRIEQVKT