wanglab/gogpt-training-data huggingface dataset:
Protein: Laminin subunit gamma-3 (Laminin, gamma 3) (F1QPJ1)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Subcellular location: Secreted, extracellular space, extracellular matrix, basement membrane {ECO:0000256|ARBA:ARBA00004302}.
Interaction partners:
- CD44 antigen
- Laminin, beta 1a.
- Uncharacterized protein.
- Integrin beta.
- Dystroglycan 1
- Integrin alpha-6 isoform X1
- Uncharacterized protein.
- Laminin subunit beta-1b precursor
- Laminin, beta 2-like.
- Integrin, alpha V
Sequence:
MDSSALHSLLLLLFASVYFVFAGMDSCYDENGVPSLCLPKFENAAFNHSVMVSNMCGIPPEDYCMQTGSTRSCHHCDAFDSELNRNATYLTDFHTDEEPTWWQSQSMFYGVQYPNSVNITLHLGKAFEITYVRLKFYTSRPESFAIYKRTDENGPWQPYQYYSASCRKTYGRDNKGFIRPGDNERTPLCTDEFSDISPLTGGNVAFSTLEGRPSAYNFDQSLVLQDWVTATDILISLDRLNTFGDEFFKDAKVLRSYFYAISDFSVGGRCKCNGHASECVVNEEGRSVCVCEHNTAGVDCQLCAPFYQDRPWARATAHSANECVRCNCSGLADECVFDVEQYRSTGQGGRCLGCRENTAGPHCEQCRENYFRSSALQPCQNCNCNALGSVSLQCDADGVCVCWPSVSGVKCDICKSGFHSLGPGGCRLCDCDERGSVGVCSAEDGRCHCKANVEGQSCNRCKPGSFNLQLENPDGCNKCFCFGHSLACFSSNQYTPIYITSDFLEDPDGWKGVFSRAHEQSLIWKEGEVYLLPYREENGFYKAPDKYLGNMLLSYGRTLSMSFTAELEELLPRSVTVRLEGSGMSVSADLHTQQEPYSQLEKTPINSFSLRLTEKHVNPSVSSFEFLRMLYNLTALHISNAGGQNYTSQLSRVSLESAVQKAYHPDVLPHALWVEVCSCPAGFAGQFCQLCAPGFTRETPDGGPFSPCVPCNCNQHGTCHPETGVCACTDFTTGRHCERCEDGYYGNALTGSPGDCLPCPCPDRTTCAQVPETGDVICTNCPTGQRGVRCELCEDGFYGNPLGWGGTVQPCVKCQCNGNVDANAVGVCDHMTGRCLKCLGHTTGDHCEKCRLGYYGNALANQLNPERKCKPCACNVAGTSGSPNDCHPNTGNCVCLGHVTGRDCGQCEAGYFNLQPGLGCEMCNCNPIGSLSSACHPITGQCMCRTGVEGMSCDTCRMGFFGFSSRGCRACNCDPMGSTSMQCHNNGTCSCRNGFVGYKCDKCEQNYYQNRLSHQCEECPVCYSIIRDQASKLKARLQELELLLSSYDCNRYSRQYRGHQQHRHQHNDLDNHIQKDQVEDYLPNALEDLLAIQEAREAFIKQFSQLETSAQTLQLQLRNIATALNCNLTNFAKHPEEGKTQKVENECRELVDTLSTALNMQDQLQKMTVELNSMAIPAVIPKEPNKWNAIVNESEVLVKSHTDMAAHIEQVAEDVFKMANRTYLQLVTLLEDNSTESHIQDLTEKLEEMQQLKENLTLEVNETLVTHLSLQKHNAEIADILHNITASLSELRRTDGNFTLVVEETNMTSFSQTFNQTNVTAAQNPQLTESEDLMNRTTNLDISVQSKEHLVNKTREEIQPDMDSAKNNLKTVQELKQLTAAVEGLKVSAVSSVVTGKEVEAEILSLQKSLQDMEQDWPQLPTLSKSFLKREKMLNEKTLVEVKKRVKQTEKMIKPSVENATDADSTAKQAEASADTVAKDAKASFTQGKRIKHASGQLRSALDVTLEQLSELESQTALKQATLEAEEDMVSSSSVIDSMETAKNQLESFTDMLTLLLSQMEADVVLENYDRILNETAVRLRVLQGAVESPSLTGKIQRLRNAASDQEKQMQNLEESLQDIRKERDSLTDIAQNLPKTCPQKGH
Protein: Fatty acyl-CoA reductase 8 (EC 1.2.1.84) (Q1PEI6)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Catalyzes the reduction of fatty acyl-CoA to fatty alcohols. Catalyzes specifically the formation of C16:0 fatty alcohol.
Interaction partners:
- Wax ester synthase/diacylglycerol acyltransferase 1
- Phosphatidylcholine:diacylglycerol cholinephosphotransferase 2
- Protein CER1-like 1
- Protein CER1-like 2
- PEBP family protein
Sequence:
MEFSCVHFLQNKTILVTGATGFLAKVFVEKILRVQPNVNKLYLVVRASDNEAATKRLRTEAFEKDLFKVLRDNLGDEKLNTLLSEKVVPVAGDIAMDHLGMKDSNLRERMQKEIDIVVNVAATTNFDERYDIGLGINTFGALNVLNFAKKCVKAQLLLHVSTAYVCGEKPGLLPEKPFVMEEICNENGLQLDINLERELMKQRLKELNEQGCSEEGTTFYMKELGMERAKLHGWPNTYVFTKSMGEMLLGNHKENLPLVIIRPTMITSTLFEPFPGWIEGLRTVDSVIIAYGKGVLKCFLVDVNSVCDMIPADMVANAMIAAAATHAGGSKVHMVYQVGSSHQNPIIYGEIREILFCYFTKNSLRSRNGSMITVSKMKLIPTLALFSLYMTIRYKLPVQLLKLVDIIYPSREGDEYKNKNRKIDMVMRLVKLYEPYVLFKGIFDDRNTKNLCAKQKEEDNRNSENFMFDFDPKIIKWKDYLINVHIPGLITHVLKK
Protein: Serine/threonine-protein kinase KIPK1 (EC 2.7.11.1) (KCBP-interacting protein kinase) (Q9LFA2)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Could be involved in the negative regulation of root growth.
Subcellular location: Cytoplasm {ECO:0000269|PubMed:16973627}. Nucleus {ECO:0000305|PubMed:16973627}. Note=Predominantly in the nucleus.
Interaction partners:
- Kinesin-like protein KIN-14E
- Proline-rich receptor-like protein kinase PERK8
- Proline-rich receptor-like protein kinase PERK10
- Proline-rich receptor-like protein kinase PERK9
- Serine/threonine-protein kinase-like protein At5g23170
- Probable serine/threonine-protein kinase PBL26
- Calcium-binding protein KIC
- Putative proline-rich receptor-like protein kinase PERK11
- Serine/threonine-protein kinase-like protein At1g28390
- Proline-rich receptor-like protein kinase PERK4
Sequence:
MGSFAGACEIVEEKDDEVRLPKHSGRYGKSVMGSSSKDLVERKQREYHGSLEYDIDMLFQSISVKPSTTRLMSSSFHHHETSASAGPSRTTSPSKRIASMKKPGTPQSPRFVGLSDSVSLKQALRDRCISKASEMAAQKRLSKSAAASPRVSEADRIKSLYNQVSNESTSSRSGLVPVDKGKGSLVEIPLMPVNDKPSSSKSVPQRFEDPSNPISEPSQAGTSFGLQGVGNQTREIKLLHRSNKPGSCLSSGSGDYEIELDENVASPSTHAFVEDDVIEIDKHVTSLPSHSSKKVNATELDKNISSSAVDSEQKGKLDDAPNSGTENGKTVRKVTRMIPRPKQPKKKILLKKKLKIGVVSATYPTKDDEEIVPSLDSSANQLLCQRCHCSLKSTSIDDNPPSYTSSHNPKICTDSLSSVSNKEAHQGSDENSSGSCNVSQSSEADIVIMKQDVSSSNNSGIGAMVEKETENPTSSEKFEFSLSSKDSLGDYSRSTSISEESNLSRFSCGNKPHMSMDVRWEAIKHIKVQYGSLGLRHFNLLKKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKSPRAQAEREILKMLDHPFLPTLYAQFTSDNLSCLVMEYCPGGDLHVLRQKQLGRCFPEPAARFYVAEILLALEYLHMLGIIYRDLKPENILVREDGHIMLTDFDLSLRCAVNPTLVRSNSPPGKDPARISGPYNTSNCIQPFCITEPSCQVSCFSPRLSSNQQQGRKPKRGDHLSKTQQHLSRSLPQLVAEPTEARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGVLLYELLYGKTPFKGYNNDETLANVVLQNLKFPDSPLVSFQAKDLIRGLLVKEPENRLGSEKGSVEIKRHPFFEGLNWALIRCAIPPELPDFYEYGGGPEAAADSPGGSNNRYLECKAIGDHLEFELF
Protein: LD24631p (Q86NY3)
Organism: Drosophila melanogaster (Fruit fly)
Interaction partners:
Sequence:
DGKASSEKDEEEAEDPEKAKEDEAAPKTETEAETKVEAPAEAAKPESEATEASETAETSTEKSSETAAVSNGDAAAEQANDEKASEDKKPSENNDEEDEDGPSPNKRPKTDGDSEKAESEKEKDRSQTTEDEYEDVVPEPRDTAALLEGYVLIGLVPVEKLVSGPQRVGSRKECEVILLVGLPGAGKTHWAHKHVAENADKRYELIGPDAFISKMTIDGASRKTVHKGRWDKVYEICLNSLAALEDIAMKRRRNFILDQTNVYASAQRRKMKGFNDFKRIAVVCIPSEDELKRRIAEKEEKGNAFTVKESTINNLRANFTLPSLEFGWFDDINYTELTGDEAKSEVKKYNEKGKKAIDAERSRDKRSRGSRDNYRRDDRNRNRYNDDRRRDYGGQRHESRWSDSRRGGGGGGYSSNSGGGGSRGYDNRRNYNSGSGGQQNWVQNSRRSGYDDRGYGGGGSGSRGYDNRNRGYAGGSGGGGGGGGGGGGGGGQQNWMQNNRRSGYDDRGYGSSRDYRDRDRGNDRSRMGSNDRNRGSSQSSYRSGGGTHQQRDFRPGHRDTKEDSRGGYERSAGQSLPKYGNNTAVGGGYDQYKQQGGAPGGGKASLSGKWSTYSQHHQQQQAPQHQQTGIWQTQQQSQQYQQPQQAAAGQQQYWAYNQMQTGYGNQQAWQSADPQQQQQWMSWWQQQQQGSGGAAAGNASGGSGVNVGGGAGNNDGGAANHYWSQYSYSTQSNAGADKK
Protein: Lectin-29Ca (Lectin29Ca) (Q9VLM0)
Organism: Drosophila melanogaster (Fruit fly)
Interaction partners:
- ACP53C14B
- Accessory gland protein Acp76A
- Serpin 28F
- ACP53C14A
- Accessory gland protein Acp53Ea
- GH11711p
- IP20609p
- ACP53C14C
- Accessory gland protein Acp29AB
- Sulfhydryl oxidase
Sequence:
MYKYATCIFSIFALWNFWGVSAKKQDTSTGTNELPKAPMPYYTIENIDMHQQHWFTYNSLRQNGTLWRIGNMEQRLEMRLQSFQNQMETKLRALKQQIEPYMENVKMSNKIKMSVFKKIGSRHFYLEKQKKMPWDSAYDTCRQMGGHLANILDEKELNEIFSEETKKKYWVDINSRANDGASWISTLSGRDVPFLKWKPNLATNIHNHCVYINSNEMYFENCANDNYFACQAEQWA
Protein: Uridine phosphorylase 1 (UPase 1) (UrdPase 1) (EC 2.4.2.3) (Q16831)
Organism: Homo sapiens (Human)
Function: Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1-phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis.
Interaction partners:
- Thymidine phosphorylase
- Cytidine deaminase
- Purine nucleoside phosphorylase
- Dihydropyrimidine dehydrogenase [NADP
- Uridine 5'-monophosphate synthase
- 5'-nucleotidase
- Uridine-cytidine kinase-like 1
- Uridine-cytidine kinase 1
- Uridine-cytidine kinase 2
- Uracil phosphoribosyltransferase homolog
Sequence:
MAATGANAEKAESHNDCPVRLLNPNIAKMKEDILYHFNLTTSRHNFPALFGDVKFVCVGGSPSRMKAFIRCVGAELGLDCPGRDYPNICAGTDRYAMYKVGPVLSVSHGMGIPSISIMLHELIKLLYYARCSNVTIIRIGTSGGIGLEPGTVVITEQAVDTCFKAEFEQIVLGKRVIRKTDLNKKLVQELLLCSAELSEFTTVVGNTMCTLDFYEGQGRLDGALCSYTEKDKQAYLEAAYAAGVRNIEMESSVFAAMCSACGLQAAVVCVTLLNRLEGDQISSPRNVLSEYQQRPQRLVSYFIKKKLSKA
Protein: Caskin-1 (CASK-interacting protein 1) (Q8WXD9)
Organism: Homo sapiens (Human)
Function: May link the scaffolding protein CASK to downstream intracellular effectors.
Subcellular location: Cytoplasm {ECO:0000250}.
Interaction partners:
- Peripheral plasma membrane protein CASK
- Neurexin-1
- Amyloid-beta A4 precursor protein-binding family A member 1
Sequence:
MGKEQELVQAVKAEDVGTAQRLLQRPRPGKAKLLGSTKKINVNFQDPDGFSALHHAALNGNTELISLLLEAQAAVDIKDNKGMRPLHYAAWQGRKEPMKLVLKAGSAVNIPSDEGHIPLHLAAQHGHYDVSEMLLQHQSNPCMVDNSGKTPLDLACEFGRVGVVQLLLSSNMCAALLEPRPGDATDPNGTSPLHLAAKNGHIDIIRLLLQAGIDINRQTKSGTALHEAALCGKTEVVRLLLDSGINAHVRNTYSQTALDIVHQFTTSQASREIKQLLREASAALQVRATKDYCNNYDLTSLNVKAGDIITVLEQHPDGRWKGCIHDNRTGNDRVGYFPSSLGEAIVKRAGSRAGTEPSLPQGSSSSGPSAPPEEIWVLRKPFAGGDRSGSISGMAGGRGSGGHALHAGSEGVKLLATVLSQKSVSESGPGDSPAKPPEGSAGVARSQPPVAHAGQVYGEQPPKKLEPASEGKSSEAVSQWLTAFQLQLYAPNFISAGYDLPTISRMTPEDLTAIGVTKPGHRKKIAAEISGLSIPDWLPEHKPANLAVWLSMIGLAQYYKVLVDNGYENIDFITDITWEDLQEIGITKLGHQKKLMLAVRKLAELQKAEYAKYEGGPLRRKAPQSLEVMAIESPPPPEPTPADCQSPKMTTFQDSELSDELQAAMTGPAEVGPTTEKPSSHLPPTPRATTRQDSSLGGRARHMSSSQELLGDGPPGPSSPMSRSQEYLLDEGPAPGTPPREARPGRHGHSIKRASVPPVPGKPRQVLPPGTSHFTPPQTPTKTRPGSPQALGGPHGPAPATAKVKPTPQLLPPTERPMSPRSLPQSPTHRGFAYVLPQPVEGEVGPAAPGPAPPPVPTAVPTLCLPPEADAEPGRPKKRAHSLNRYAASDSEPERDELLVPAAAGPYATVQRRVGRSHSVRAPAGADKNVNRSQSFAVRPRKKGPPPPPPKRSSSALASANLADEPVPDAEPEDGLLGVRAQCRRASDLAGSVDTGSAGSVKSIAAMLELSSIGGGGRAARRPPEGHPTPRPASPEPGRVATVLASVKHKEAIGPGGEVVNRRRTLSGPVTGLLATARRGPGESADPGPFVEDGTGRQRPRGPSKGEAGVEGPPLAKVEASATLKRRIRAKQNQQENVKFILTESDTVKRRPKAKEREAGPEPPPPLSVYHNGTGTVRRRPASEQAGPPELPPPPPPAEPPPTDLAHLPPLPPPEGEARKPAKPPVSPKPVLTQPVPKLQGSPTPTSKKVPLPGPGSPEVKRAHGTPPPVSPKPPPPPTAPKPVKAVAGLPSGSAGPSPAPSPARQPPAALAKPPGTPPSLGASPAKPPSPGAPALHVPAKPPRAAAAAAAAAAAPPAPPEGASPGDSARQKLEETSACLAAALQAVEEKIRQEDAQGPRDSAAEKSTGSILDDIGSMFDDLADQLDAMLE
Protein: CCR4-Not complex 3'-5'-exoribonuclease subunit Ccr4 (EC 3.1.13.4) (Carbon catabolite repressor protein 4) (Cytoplasmic deadenylase) (Glucose-repressible alcohol dehydrogenase transcriptional effector) (O74874)
Organism: Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Function: Acts as catalytic component of the CCR4-NOT core complex, which in the nucleus seems to be a general transcription factor, and in the cytoplasm the major mRNA deadenylase involved in mRNA turnover (By similarity). Ccr4 has 3'-5' RNase activity with a strong preference for polyadenylated substrates and also low exonuclease activity towards single-stranded DNA (By similarity). Participates in the shortening of poly(A)-tails. Erh1-mmi1 complex-mediated recruitment of CCR4-NOT to target RNAs promotes heterochromatin formation at RNAi-dependent heterochromatin domains (HOODs), including a subset of meiotic genes, lncRNAs and retrotransposons. Recruitment of the CCR4-NOT complex to rDNA promotes rDNA heterochromatin assembly.
Subcellular location: Cytoplasm {ECO:0000269|PubMed:16823372}. Nucleus {ECO:0000269|PubMed:16823372}.
Interaction partners:
- Cell differentiation protein rcd1
- General negative regulator of transcription subunit 1
- General negative regulator of transcription subunit 3
- Poly
- Putative general negative regulator of transcription C16C9.04c
- General negative regulator of transcription subunit 2
- Putative ATP-dependent RNA helicase ste13
- ABC transporter domain-containing protein C20G4.01
- Cell division control protein 73
- DNA-directed RNA polymerase II subunit rpb1
Sequence:
MFNPRYTQGTIYPGAHPGLLTPDHQHAAILSVQNSPALENSNISEHWKQQIALATQSRSFSSPHQRAHNAAALARSGGPGFSMNYNARTGAFTGGPNAAGLSSLGGKYNTSSTTTTLTTSTTLNTSSGTTLNSTSKTTTSSVAVDDQKSKSDSKKERRDWTCLDLGGIGLRNVSTDLFKFSFLTELYINHNNLTRLPPEIGKLKNLVILDASGNSIKTIPPELGLLTELREVLLFDNMISVIPAELGTLFQLKILGIEGNPLQDVYKNQIMESGTAGLIAALRDGCPVGPPPPERGWEKLVSDDDDDVNDNVSTSVRDLTAADSNKPSTTSKNLKFTIMSYNVLCERYATSTLYGYTPSWALSWSYRKDLIMQELGGYNADIICLQEVDVENYDTFFAPQMSLKGYKGVHFPKSRVRTMNEVERRIVDGCATFFKTSKYVMHEKMVIEYNQAPSLRRQDIKLTSNMYNRVMTKDNISVITLLENKENGSRLIVANCHIHWDPQFRDVKVIQVAMLMDEIAQVATKFRNMPSKIPSDQLKDERPTYPEYLKIPILICGDFNSVQGSGVYDFLSSGSISQNHEDFMNNDYGEYTVNGRSHAFNLKSAYGESEALSFTNYTPGFKGAIDHIWYTGNSLEVTGLLKGVDKDYLSGVVGFPNAHFPSDHICLLAEFKVKQEKTPLPSSKFNNDKK
Protein: FMRFamide-like neuropeptides 6 [Cleaved into: QQDSEVEREMM; KSAYMRF-amide 1 (AF8 1) (PF3 1); KSAYMRF-amide 2 (AF8 2) (PF3 2); KSAYMRF-amide 3 (AF8 3) (PF3 3); KSAYMRF-amide 4 (AF8 4) (PF3 4); KSAYMRF-amide 5 (AF8 5) (PF3 5); KSAYMRF-amide 6 (AF8 6) (PF3 6)] (Q19165)
Organism: Caenorhabditis elegans
Function: FMRFamides and FMRFamide-like peptides are neuropeptides. KSAYMRF-amide has an excitatory effect on dissected pharyngeal myogenic muscle system.
Subcellular location: Secreted {ECO:0000305}.
Interaction partners:
- FMRFamide-like neuropeptides 14
- FMRF-Like Peptide
- FMRFamide-like neuropeptides 16
- FMRFamide-like neuropeptide 18
- FMRFamide-like neuropeptides 9
- FMRFamide-like neuropeptides 7
- FMRFamide-like neuropeptides 22
- FMRFamide-like neuropeptides 3
- FMRFamide-like neuropeptides 1
- FMRFamide-like neuropeptides 5
Sequence:
MNSRGLILTLGVVIAVAFAQQDSEVEREMMKRKSAYMRFGRSDGGNPMEMEKRKSAYMRFGKRSSGGDEQELVGGDDIDMEKRKSAYMRFGKRSGPQEDDMPMEKRKSAYMRFGKRSSDMEVIGNEGVDGDAHDLFKRKSAYMRFGKRSMGEEEDHDMMKRKSAYMRFGR
Protein: Bruchpilot, isoform L (A0A0B4K6V0)
Organism: Drosophila melanogaster (Fruit fly)
Subcellular location: Cell projection, axon {ECO:0000256|ARBA:ARBA00004489}. Cytoplasm, cytoskeleton {ECO:0000256|ARBA:ARBA00004245}. Synapse {ECO:0000256|ARBA:ARBA00034103}.
Interaction partners:
Sequence:
MSRDDYNPVTSSGVRSPGRVRRLQELPTVDRSPSRDYGAPRGSPLAMGSPYYRDMDEPTSPAGAGHHRSRSASRPPMAHAMDYPRTRYQSLDRGGLVDPHDREFIPIREPRDRSRDRSLERGLYLEDELYGRSARQSPSAMGGYNTGMGPTSDRAYLGDLQHQNTDLQRELGNLKRELELTNQKLGSSMHSIKTFWSPELKKERALRKEESAKYSLINDQLKLLSTENQKQAMLVRQLEEELRLRMRQPNLEMQQQMEAIYAENDHLQREISILRETIKDLECRVETQKQTLIARDESIKKLLEMLQAKGMGKEEERQMFQQMQAMAQKQLDEFRLEIQRRDQEILAMAAKMKTLEEQHQRHIAVLKESLCAKEEHYNMLQTDVEEMRARLEEKNRLIEKKTQGTLQTVQERNRLTSELTELKDHMDIKDRKISVLQRKIENLEDLLKEKDNQVDMARARLSAMQAHHSSSEGALTSLEEAIGDKEKQMAQLRDQRDRAEHEKQEERDLHEREVADYKIKLRAAESEVEKLQTRLERAVTERERLEIKLEASQSELGKSKAELEKATCEMGRSSADWESTKQRIARLELENERLKHDLERSQMQLEEQTTLHKTTFGRTTMTTSQELDRAQERADKASAELRRTQAELRVTQSDAERAREEAAALQEKLEKSQGEVYRLKAKLENAQGEQESLRQELEKAQSGVSRIHADRDRAFSEVEKIKEEMERTQATLGKSQLQHEKLQNSLDKAQNEVDHLQDKLDKACTENRRLVLEKEKLTYDYDNLQSQLDKALGQAARMQKERETLSLDTDRIREKLEKTQVQLGRIQKERDQFSDELETLKERSESAQTLLMKAARDREAMQTDLEVLKERYEKSHAIQQKLQMERDDAVTEVEILKEKLDKALYASQKLIDEKDTSNKEFEKMLEKYDRAQNEIYRLQSRCDTAEADRARLEVEAERSGLAASKAREDLRKLQDESTRLQEACDRAALQLSRAKECEDNARSELEHSRDRFDKLQTDIRRAQGEKEHFQSELERVTYELERAHAAQTKASASVEAAKEEAAHYAVELEKMRDRYEKSQVELRKLQDTDTFGRETRRLKEENERLREKLDKTLMELETIRGKSQYESESFEKYKDKYEKIEMEVQNMESKLHETSLQLELSKGEVAKMLANQEKQRSELERAHIEREKARDKHEKLLKEVDRLRLQQSSVSPGDPVRASTSSSSALSAGERQEIDRLRDRLEKALQSRDATELEAGRLAKELEKAQMHLAKQQENTESTRIEFERMGAELGRLHDRLEKAEAEREALRQANRSGGAGAAPHPQLEKHVQKLESDVKQLAMEREQLVLQLEKSQEILMNFQKELQNAEAELQKTREENRKLRNGHQVPPVAAPPAGPSPAEFQAMQKEIQTLQQKLQESERALQAAGPQQAQAAAAAGASREEIEQWRKVIEQEKSRADMADKAAQEMHKRIQLMDQHIKDQHAQMQKMQQQMQQQQQAAQQAVQQAAQQQQSAAGAGGADPKELEKVRGELQAACTERDRFQQQLELLVTELEKSKMSNQEQAKQLQTAQQQVQQLQQQVQQLQQQMQQLQQAASAGAGATDVQRQQLEQQQKQLEEVRKQIDNQAKATEGERKIIDEQRKQIDAKRKDIEEKEKKMAEFDVQLRKRKEQMDQLEKSLQTQGGGAAAAGELNKKLMDTQRQLEACVKELQNTKEEHKKAATETERLLQLVQMSQEEQNAKEKTIMDLQQALKIAQAKVKQAQTQQQQQQDAGPAGFLKSFF
Protein: Chemotaxis protein CheY (P0AE67)
Organism: Escherichia coli (strain K12)
Function: Involved in the transmission of sensory signals from the chemoreceptors to the flagellar motors. In its active (phosphorylated or acetylated) form, CheY exhibits enhanced binding to a switch component, FliM, at the flagellar motor which induces a change from counterclockwise to clockwise flagellar rotation. Overexpression of CheY in association with MotA and MotB improves motility of a ycgR disruption, suggesting there is an interaction (direct or indirect) between the c-di-GMP-binding flagellar brake protein and the flagellar stator.
Subcellular location: Cytoplasm {ECO:0000305}.
Interaction partners:
- Protein phosphatase CheZ
- Methyl-accepting chemotaxis protein I
- Flagellar motor switch protein FliM
- Chemotaxis protein methyltransferase
- Methyl-accepting chemotaxis protein II
- Protein-glutamate methylesterase/protein-glutamine glutaminase
- Chemotaxis protein CheA
- Flagellar motor switch protein FliN
- Chemotaxis protein CheW
- Methyl-accepting chemotaxis protein IV
Sequence:
MADKELKFLVVDDFSTMRRIVRNLLKELGFNNVEEAEDGVDALNKLQAGGYGFVISDWNMPNMDGLELLKTIRADGAMSALPVLMVTAEAKKENIIAAAQAGASGYVVKPFTAATLEEKLNKIFEKLGM
Protein: FI06571p (Q9VTW3)
Organism: Drosophila melanogaster (Fruit fly)
Subcellular location: Nucleus {ECO:0000256|ARBA:ARBA00004123, ECO:0000256|PROSITE-ProRule:PRU00108, ECO:0000256|RuleBase:RU000682}.
Interaction partners:
- Beaten path IIIa, isoform D
- Fork head domain-containing protein FD3
Sequence:
MIDEHHPMQIGMFPMDIKCQQQQLGAGQLPQTGGLNQLLLLNGNERMLTTPTTAATSVVVAAGRSASTKAGVAHNDKMASVSRTVNGSCSNHNSSNSSSSSSTNSSSNMAINKQPMGMGPGTGTGMGTGTGHGPGPPNHTHCNRITLGECSLNGMDGFATPAAPPSASNTPQAPLGMASNSGMGMELGLAMASPQLSQCAHCCQPICDRYIMRVVENSFHEGCLKCTACSLHLVHSCYAREGKLYCRVDYERLYIRNHCLGCGLKIAADELVMRCHENVFHLKCFACVVCGALLKKGEQYVVKQGQLFCRFDYEKEVEMLQGYDFYGDELFPPKLDGRRGPKRPRTILNTQQRRAFKASFEVSPKPCRKVRENLAKDTGLSLRIVQVWFQNQRAKVKKIQKKAKQEPPSKGASDSQDSQESLDSSLATKIKDEAHSDSESQLESPYSTTSDGLTRMRCTIKDEQEQVPFNCMETNKENCNKNSEPILNTILGLSYATFQQLMGPFAQTPMINPIDRLYSMQSSYFRPEELQSYGECGVKDSMDH
Protein: Probable mitochondrial pyruvate carrier 2 (MPC2) (Q09896)
Organism: Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Function: Mediates the uptake of pyruvate into mitochondria.
Subcellular location: Mitochondrion inner membrane {ECO:0000250|UniProtKB:P38857}; Multi-pass membrane protein {ECO:0000255}.
Interaction partners:
- Probable mitochondrial pyruvate carrier 1
Sequence:
MFRAGFKRFWNHPAGPKTVHFWAPAMKWTLVLSGIGDYARSPEYLSIRQYAALCATGAIWTRWSLIVRPKNYFNATVNFFLAIVGAVQVSRILVYQRQQKRITAQSEQRTELARSLAA
Protein: NAD(P)H dehydrogenase [quinone] 1 isoform 1 (EC 1.6.5.2) (NAD(P)H dehydrogenase, quinone 1) (A0A2R8PW65)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Interaction partners:
Sequence:
MAQKTALIVYAHQSPASFNAAARDVAVQALTKKGYKVLVSDLYAMKFKASATAEDIKGDLQNPEHFVYNNEMMVAWKEGRLSDDVAEEQHKVEQADLIIFQLDRRRIICFVMSLQYPLYWFTIPAIMKGWIDRVLTQGFAFSMQNMYDNGIFKNKRAMLSFTTGGMESMYKDDSLHGDINILLWPLQNGVLRFCGFQVLAPQIFWSPAYTPPEGRAAMLDGWRERLGGVFEEKPLSFAPSEYFDLSFQAGFCLRPEVKDKLASEPYGITTAHHLGKPLPPNNQTKPKQN
Protein: PTS system maltose-specific EIICB component [Includes: Maltose permease IIC component (PTS system maltose-specific EIIC component); Maltose-specific phosphotransferase enzyme IIB component (EC 2.7.1.208) (PTS system maltose-specific EIIB component)] (P19642)
Organism: Escherichia coli (strain K12)
Function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This system is involved in maltose transport. MalX can also recognize and transport glucose even though this sugar may not represent the natural substrate of the system.
Subcellular location: Cell inner membrane {ECO:0000255|PROSITE-ProRule:PRU00426, ECO:0000269|PubMed:15919996}; Multi-pass membrane protein {ECO:0000255|PROSITE-ProRule:PRU00426, ECO:0000269|PubMed:15919996}.
Interaction partners:
- PTS system glucose-specific EIIA component
- Protein MalY
- PTS system glucose-specific EIICB component
- Glucose-6-phosphate isomerase
- Phosphoglucomutase
- Phosphocarrier protein HPr
- Glucokinase
- Uncharacterized fimbrial-like protein SfmH
- Prophage lipoprotein Bor homolog
- Type 1 fimbrin D-mannose specific adhesin
Sequence:
MTAKTAPKVTLWEFFQQLGKTFMLPVALLSFCGIMLGIGSSLSSHDVITLIPVLGNPVLQAIFTWMSKIGSFAFSFLPVMFCIAIPLGLARENKGVAAFAGFIGYAVMNLAVNFWLTNKGILPTTDAAVLKANNIQSILGIQSIDTGILGAVIAGIIVWMLHERFHNIRLPDALAFFGGTRFVPIISSLVMGLVGLVIPLVWPIFAMGISGLGHMINSAGDFGPMLFGTGERLLLPFGLHHILVALIRFTDAGGTQEVCGQTVSGALTIFQAQLSCPTTHGFSESATRFLSQGKMPAFLGGLPGAALAMYHCARPENRHKIKGLLISGLIACVVGGTTEPLEFLFLFVAPVLYVIHALLTGLGFTVMSVLGVTIGNTDGNIIDFVVFGILHGLSTKWYMVPVVAAIWFVVYYVIFRFAITRFNLKTPGRDSEVASSIEKAVAGAPGKSGYNVPAILEALGGADNIVSLDNCITRLRLSVKDMSLVNVQALKDNRAIGVVQLNQHNLQVVIGPQVQSVKDEMAGLMHTVQA
Protein: receptor protein-tyrosine kinase (EC 2.7.10.1) (D9MNA7)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Subcellular location: Cell membrane {ECO:0000256|ARBA:ARBA00004251}; Single-pass type I membrane protein {ECO:0000256|ARBA:ARBA00004251}. Membrane {ECO:0000256|RuleBase:RU000311}; Single-pass type I membrane protein {ECO:0000256|RuleBase:RU000311}.
Interaction partners:
Sequence:
MKSSTISRIHFLFTAITTGLVLLCLGTSGLELSPSAPQIILSINSSSSITCSGWSNVTWRFRRDENIPDFRTEELSASSSVLHLEQVTWRHTGVYVCTEKKTNESREVAVFVPDPDVWFLENEHVMVTKTREEGTIPCLVTNPSINVTLYERDTEMAVEGSYNPSVGYSAALDDRTYICKGELNGEEKESDLFYVFSILAPEALDPYINASKTVLKQGETLNVNCTVHGVELVFFSWDFPNKDMGGIEPLTDVLSSMSMRSCLNITDVSLDRSGQYVCHVHEGVQDQRASASINITVLEKGFVSLTPPLDRNISAQLGENVELKVEIEAYPKPTVQWRKDGAVIRGHSMREEHETRFVSTLTLVRTRLQQMGLYKVTVQNEDALKEMIFDLEVKVPPQITELSDHHLPEKKHAVTCVAEGVPKPSIQWFSCDSMTRCSNRSAVWSPLVEDPESVTIQTNVTYNSTRKIHQVLSQVTLVRPQLLTIRCEASNERGARARDIRLVNSTLFSQVAVLAAVLALVVIVIISIIILIAVWRKKPRYEIRWKVIESVSLDGHEYIYVDPIHLPYDLAWEMPRDSLVLGRTLGSGAFGRVVEATAYGLGISQSATKVAVKMLKSTARRSETQALMSELKIMSHLGPHINIVNLLGACTKQGPLYLVTEYCRYGDLVDYLHRNKHSFLQNFADKNHIAHGTQICNDSDSGKEYVSFGSECDGGYMDMTKDEQTEYVPMQELADTIKYADIQPSPYESPYQQEIYQEQGPRVDHPLVISDSPVLSYTDLVGFSYQVAQGMEFLASKNCVHRDLAARNVLICEGKLAKICDFGLARDIMHDNNYISKGSTFLPLKWMAPESIFHNLYTTLSDVWSYGILLWEIFTLGGTPYPDLPMNELFYSALKRGYRMAKPSYASDEIYEVMRKCWDEKYEKRPEFSFLVHTMGNMLSDAYKKKYSQVNDSFLKSDHPAVARMKPRVPSPFPGAFSPQSPTPELTPRPQIDGEAPHNEYIIPIPDPKPEEETQDEPTAAEIPSSSFSSDEETVSMEAPSTEPEREELLTEHFGSPEVEESFL
Protein: Encephalopsin (Opsin-3) (A9NJI7)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Subcellular location: Membrane {ECO:0000256|ARBA:ARBA00004141, ECO:0000256|RuleBase:RU004951}; Multi-pass membrane protein {ECO:0000256|ARBA:ARBA00004141, ECO:0000256|RuleBase:RU004951}.
Interaction partners:
- Parietopsin
Sequence:
MNSFNETPTEAHLENYNYIFADETYKLLTFTIGSIGVLGFCNNIIVIILYSRYKRLRTPTNLLIVNISVSDLLVSLTGVNFTFVSCVKRRWVFNSATCVWDGFSNSLFGIVSIMTLSGLAYERYIRVVHAKVVDFPWAWRAITHIWLYSLAWTGAPLLGWNRYTLEVHQLGCSLDWASKDPNDASFILFFLLGCFFVPVGVMVYCYGNILYTVKMLRSIQDLQTVQTIKILRYEKKVAVMFLMMISCFLVCWTPYAVVSMLEAFGKKSVVSPTVAIIPSLFAKSSTAYNPVIYAFMSRKFRRCMLQMLCSRLTSLQHTIKDRPLSRIEHPIRPIVMSQSRTDRPKKRVTFSSSSIVFIIASHDTHPLDITSKCNDEPDINVIQVRPL
Protein: Candida glabrata strain CBS138 chromosome E complete sequence (Q6FV50)
Organism: Candida glabrata (strain ATCC 2001 / BCRC 20586 / JCM 3761 / NBRC 0622 / NRRL Y-65 / CBS 138) (Yeast) (Nakaseomyces glabratus)
Interaction partners:
- HECT-type E3 ubiquitin transferase
- Ubiquitin-activating enzyme E1 1
- Nucleoporin NSP1
- Polyubiquitin
- Candida glabrata strain CBS138 chromosome H complete sequence
- Anaphase-promoting complex subunit 11
- Candida glabrata strain CBS138 chromosome E complete sequence
- Candida glabrata strain CBS138 chromosome G complete sequence
- Candida glabrata strain CBS138 chromosome J complete sequence
- E3 ubiquitin-protein ligase
Sequence:
MSSKRIAKELSDLGRDPPTSCSAGPVGDDLYHWQASIMGPPDSPYAGGVFFLSIHFPTDYPFKPPKISFTTKIYHPNINANGNICLDILKDQWSPALTLSKVLLSICSLLTDANPDDPLVPEIAHIYKTDRAKYEATAREWTKKYAV
Protein: Glia maturation factor beta (GMF-beta) (Q9CQI3)
Organism: Mus musculus (Mouse)
Function: This protein causes differentiation of brain cells, stimulation of neural regeneration, and inhibition of proliferation of tumor cells.
Interaction partners:
- Actin-related protein 2
Sequence:
MSESLVVCDVAEDLVEKLRKFRFRKETHNAAIIMKIDKDERLVVLDEELEGVSPDELKDELPERQPRFIVYSYKYQHDDGRVSYPLCFIFSSPVGCKPEQQMMYAGSKNKLVQTAELTKVFEIRNTEDLTEEWLREKLGFFH