wanglab/gogpt-training-data huggingface dataset:
Protein: SWI/SNF global transcription activator complex subunit snf59 (O74792)
Organism: Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Function: Component of the SWI/SNF complex, an ATP-dependent chromatin remodeling complex, which is required for the positive and negative regulation of gene expression of a large number of genes. It changes chromatin structure by altering DNA-histone contacts within a nucleosome, leading eventually to a change in nucleosome position, thus facilitating or repressing binding of gene-specific transcription factors.
Subcellular location: Nucleus {ECO:0000269|PubMed:16823372}.
Interaction partners:
- SWI/SNF chromatin-remodeling complex subunit sol1
- SWI/SNF and RSC complexes subunit arp9
- SWI/SNF chromatin-remodeling complex subunit snf5
- SWI/SNF and RSC complexes subunit ssr3
- SWI/SNF chromatin-remodeling complex subunit snf22
- SWI/SNF and RSC complexes subunit ssr2
- SWI/SNF and RSC complexes subunit ssr1
- SWI/SNF and RSC complexes subunit arp42
- SWI/SNF chromatin-remodeling complex subunit snf30
- Transcription initiation factor TFIID subunit 14
Sequence:
MEEEDITLEHSDDLNKEESGESNRVNIEEPEHHDNSNKESTNLDDLNMLEEPKYHDNSNKESTNLDDLNMLEEPEHHDNSKKESTNLDDSNMLEEPKHHDNSNKESTNLDDLNMSEEPKHHDSSNKESTNLDNSNMDESENQKNFKIEEPKPSGDFRNEGPKQCDDSKIEKPELHVNSKIEEPIHRIDSEHNEPEYHTESKNEESEHNTKSIREEPIHHVDSKNEEPVYSKIPEKMGDEFSENSLSKSDSAVKQEGNLLIHPNNSLKDTAPSKCKEPPVDEALSKKEISDDIAQITSVTPITEKIEDKDKYISEVIDTYGKLADGFEYRAKTFCLEGRGKVLYMLGTECSRLLGFKDSYFMFHKTPSLRKVLTTQSERDQMVEMGLLASNFRFRQLSIVPARQMFLAFGARILMKGTIDPESHKALIEKNISWADDEYYHMDVMANGSTRSSSVKLELKSMDNQNSPSPFQGKDILTLAQGASFYNSKVMRTRNLRKEARLSYYTKLRGVNRSVS
Protein: At5g63040 (Transmembrane protein) (Q29Q13)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Interaction partners:
Sequence:
MAAKLVSSSASSLVPSIFSPFQPRSSFQFRSPRVQPAHLHCYHSLHLKTDKIGSLHISSRGQKPSEVSRKRTYLPLATSEEKFHYTEDTTNDPDTVSPQIGTEATPRDDDSTIQYNRNDGKPGFISFYNPRNKTEDIIIPPETQSPWGRLLWLIGPAVLVSSFILPPVYLRRIVSAVFEDSLLTDFLILFFTEALFYCGVAAFLLIIDRSRKGSGKVPQNRINPSQLGQRISSVATLVLSLMIPMVTMGFVWPWTGPAASATLAPYLVGIVVQFAFEQYARYRNSPSSPIIPIIFQVYRLHQLNRAAQLVTALSFTVKGAEATVNNLAIKKSLGTLLNVIQVLGVISIWSISSFLMWLSSPSQNQS
Protein: Chloride channel protein 2 (O54822)
Organism: Rattus norvegicus (Rat)
Subcellular location: Basolateral cell membrane {ECO:0000256|ARBA:ARBA00004554}; Multi-pass membrane protein {ECO:0000256|ARBA:ARBA00004554}. Cell projection, axon {ECO:0000256|ARBA:ARBA00004489}. Cell projection, dendritic spine membrane {ECO:0000256|ARBA:ARBA00004332}; Multi-pass membrane protein {ECO:0000256|ARBA:ARBA00004332}.
Interaction partners:
Sequence:
MAAATAAAATVAGEGMEPRALQYEQTLMYGRYTQELGAFAKEEAARIRLGGPEPWKGSPSARATPDLLEYGQSRCARCRICSVRCHKFLVSRVGEDWIFLVLLGLLMALVSWAMDYAIAVCLQAQQWMSRGLNTNILLQYLAWVTYPVVLITFSAGFTQILAPQAVGSGIPEMKTILRGVVLKEYLTLKTFVAKVIGLTCALGSGMPLGKEGPFVHIASMCAALLSKFLSLFGGIYENESRNTEMLAAACAVGVGCCFAAPIGGVLFSIEVTSTFFAVRNYWRGFFAATFSAFIFRVLAVWNRDEETITALFKTRFRLDFPFDLQELPAFAVIGIASGFGGALFVYLNRKIVQVMRKQKTINRFLMKKRLLFPALVTLLISTLTFPPGFGQFMAGQLSQKETLVTLFDNRTWVRQGLVEDLGAPSTSQAWSPPRANVFLTLVIFILMKFWMSALATTIPVPCGAFMPVFVIGAAFGRLVGESMAAWFPDGIHTDSSTYRIVPGGYAVVGAAALAGAVTHTVSTAVIVFELTGQIAHILPVMIAVILANAVAQSLQPSLYDSIIRIKKLPYLPELGWGRHQQYRVRVEDIMVRDVPHVALSCTFRDLRLALHRTKGRMLALVESPESMILLGSIERSQVVALLGAQLSPARRRQHMQKLRKAQMSPPSDQESPPSSETSIRFQVNTEDSGFPGAHGQTHKPLKPALKRGPSNATSLQEGTTGNMESAGIALRSLFCGSPPLESTTSESDSDLEGKMSPEEILEWEEQQLDEPVNFSDCKIDPAPFQLVERTSLHKTHTIFSLLGVDHAYVTSIGRLIGIVTLKELRKAIEGSVTAQGVKVRPPLASFRDSATSSSDTETTEVHALWGPRSRHGLPREGTPSDSDDKCQ
Protein: Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial (Isocitric dehydrogenase subunit beta) (NAD(+)-specific ICDH subunit beta) (Q68FX0)
Organism: Rattus norvegicus (Rat)
Function: Plays a structural role to facilitate the assembly and ensure the full activity of the enzyme catalyzing the decarboxylation of isocitrate (ICT) into alpha-ketoglutarate. The heterodimer composed of the alpha (IDH3A) and beta (IDH3B) subunits and the heterodimer composed of the alpha (IDH3A) and gamma (IDH3G) subunits, have considerable basal activity but the full activity of the heterotetramer (containing two subunits of IDH3A, one of IDH3B and one of IDH3G) requires the assembly and cooperative function of both heterodimers.
Subcellular location: Mitochondrion {ECO:0000250}.
Interaction partners:
- Isocitrate dehydrogenase subunit alpha, mitochondrial
- Isocitrate dehydrogenase subunit gamma 1, mitochondrial
- Aconitate hydratase, mitochondrial
- Probable isocitrate dehydrogenase gamma 2, mitochondrial
- 2-oxoglutarate dehydrogenase complex component E1
- Isocitrate dehydrogenase, mitochondrial
- Isocitrate dehydrogenase cytoplasmic
- 2-oxoglutarate dehydrogenase-like, mitochondrial
- Cytoplasmic aconitate hydratase
- Succinate--CoA ligase subunit alpha, mitochondrial
Sequence:
MAALSNVRWLTRAVLGARNSGAWRGLRTAASAQAASQSQAQDVRVEGAFPVTMLPGDGVGPELMHAVKEVFKAAAVPVEFKEHHLSEVQNMASEEKLEQVLSSMKENKVAIIGKIYTPMEYKGELASYDMQLRRKLDLFANVVHVKSLPGYKTRHNNLDLVIIREQTEGEYSSLEHESARGVIECLKIVTRTKSQRIAKFAFDYATKKGRSKVTAVHKANIMKLGDGLFLQCCEEVAELYPKIKFETMIIDNCCMQLVQNPYQFDVLVMPNLYGNIIDNLAAGLVGGAGVVPGESYSAEYAVFETGARHPFAQAVGRNIANPTAMLLSASNMLRHLNLEYHSSMIADAVKKVIKVGKVRTRDMGGYSTTTDFIKSVIGHLHPHGG
Protein: Cold-regulated protein 28 (Q8L983)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Together with COR27, involved in central circadian clock regulation and in flowering promotion, by binding to the chromatin of clock-associated evening genes TOC1, PRR5, ELF4 and cold-responsive genes in order to repress their transcription. Negative regulator of freezing tolerance.
Subcellular location: Nucleus {ECO:0000269|PubMed:27990760}.
Interaction partners:
- Two-component response regulator-like APRR5
- Protein EARLY FLOWERING 4
- At1g13650
- Two-component response regulator-like APRR1
- Ankyrin repeat protein
- Protein CCA1
- Protein BIG GRAIN 1-like E
Sequence:
MENDCTVNIVSLEKDRDVSEASAESQSESTLSNSLDSGVTAETSRSDADSKLDECTAWTNEKHNSYLDYLESSFVRQLYSLLGGGTQRLSRTRDVQSNSHKSADQFTVLQNGCWQKVNFGKKQSCLETSSEFRFHRNSLRNKPENSNGNYTMGTTVQGDVLCHDETKHSEASGQNFREEEEEEEKGEVSKKREREANNDDSSLKEDQVVPVRMVKPRT
Protein: Hairy-related 4, tandem duplicate 2 (B0V3D1)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Subcellular location: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
Interaction partners:
Sequence:
MAPTITGSISSRETLLTNKLRKPMVEKIRRERINSSIEKLKTLLAQEFIKQQPDSRQEKADILEMTLDFLRRSQKSSAAGDGRSRCVQEAVSFLSQCPVQTQSHTRLMKLFLHMQTPADQHTRVDNPQTTETHANSSAKQHTPARSHIWRPW
Protein: U-box domain-containing protein 33 (Plant U-box protein 33) [Includes: E3 ubiquitin ligase (EC 2.3.2.27) (RING-type E3 ubiquitin transferase); Serine/threonine-protein kinase (EC 2.7.11.-)] (Q8GUH1)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Functions as an E3 ubiquitin ligase.
Interaction partners:
- SCP1-like small phosphatase 4
- Transmembrane protein
- At5g11860
- NADH dehydrogenase flavoprotein 1, mitochondrial
- UDP-glycosyltransferase 73C7
- UDP-N-acetylglucosamine transferase subunit ALG14
Sequence:
MALVSPIPAMGERAGSMRFHGIGSPGSRSSRSGIMDEPVSRLIDEKIFVAVDKHVAKSKSTLIWALQNTGGKKICLIHVHQPSQMIPLMGAKFPVGAVKEEEVRVFREKEREKVHMILDDYLRICQQRGVRAEKMFIEMESIENGIVQLISELGIRKLVMGAAADRHYSRRMTDLKSRKAIFVRREAPTLCQIWFTCKGYLIHTREATMDDTESEYASPRPSISASDLLQTFSTPESEHQHISRVQSTDSVQQLVSNGSSTEQSGRVSDGSLNTDEEERESDGSEVTGSATVMSSGHSSPSSFPDGVDDSFNVKIRKATSEAHSSKQEAFAETLRRQKAEKNALDAIRRAKQSESAYSEELKRRKDTEIAVAKEKERFITIKNEQEVIMEELQSAMAQKAMLESQIAKSDGTMEKLNQKLDIAVKLLQKLRDEREELQTERDRALREAEELRSHAETSTLQLPQYFTDFSFSEIEEATNHFDSTLKIGEGGYGSIYVGLLRHTQVAIKMLNPNSSQGPVEYQQEVDVLSKMRHPNIITLIGACPEGWSLVYEYLPGGSLEDRLTCKDNSPPLSWQNRVRIATEICAALVFLHSNKAHSLVHGDLKPANILLDSNLVSKLSDFGTCSLLHPNGSKSVRTDVTGTVAYLDPEASSSGELTPKSDVYSFGIILLRLLTGRPALRISNEVKYALDNGTLNDLLDPLAGDWPFVQAEQLARLALRCCETVSENRPDLGTEVWRVLEPMRASSGGSSSFHLGRNEHRIAPPYFICPIFQEVMQDPHVAADGFTYEAEAIRAWLDSEHDTSPMTNVKLSHTSLIANHALRSAIQEWLQHHL
Protein: Embryo-specific protein ATS3B (Protein ARABIDOPSIS THALIANA SEED 3B) (Q6NPM5)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: May play a role during embryo development.
Subcellular location: Secreted {ECO:0000305}.
Interaction partners:
- Protein yippee-like At3g55890
- Alpha/beta hydrolase related protein
- anthranilate synthase
- Ricin B-like lectin EULS3
- DnaJ and Myb-like DNA-binding domain-containing protein
- Pectinesterase/pectinesterase inhibitor 18
- Transcription factor VIP1
Sequence:
MASVRLFFTLISFVFIISTSVYESKVLDPPHVAESFNVSLIQKLGNTCAYTVIISTSCSSTRYTRDQISVAFGDGYGNQIYAPRLDDPSTKTFEQCSSDTFQINGPCTYQICYVYLYRSGPDGWIPNTVKIYSHGSKAVTFPYNTYVPESVWYGFNYCNSASDSNVLAIGLRRSVIILLGFVVAGTTLLL
Protein: Branched-chain-amino-acid aminotransferase 6 (Atbcat-6) (EC 2.6.1.42) (Q9LPM9)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Converts 2-oxo acids to branched-chain amino acids. Acts on leucine, isoleucine and valine (By similarity).
Subcellular location: Cytoplasm.
Interaction partners:
- Dihydroxy-acid dehydratase, chloroplastic
- 2-isopropylmalate synthase 1, chloroplastic
- 2-isopropylmalate synthase 2, chloroplastic
- Threonine dehydratase biosynthetic, chloroplastic
- 3-methyl-2-oxobutanoate hydroxymethyltransferase 2, mitochondrial
- 3-methyl-2-oxobutanoate hydroxymethyltransferase 1, mitochondrial
- Probable cystathionine gamma-synthase 2
- Alanine--glyoxylate aminotransferase 2 homolog 1, mitochondrial
- Alanine--glyoxylate aminotransferase 2 homolog 3, mitochondrial
- Alanine--glyoxylate aminotransferase 2 homolog 2, mitochondrial
Sequence:
MAPSSSPLRTTSETDEKYANVKWEELGFALTPIDYMYVAKCRQGESFTQGKIVPYGDISISPCSPILNYGQGLFEGLKAYRTEDDRIRIFRPDQNALRMQTGAERLCMTPPTLEQFVEAVKQTVLANKKWVPPPGKGTLYIRPLLLGSGATLGVAPAPEYTFLIYASPVGDYHKVSSGLNLKVDHKYHRAHSGGTGGVKSCTNYSPVVKSLLEAKSAGFSDVLFLDAATGRNIEELTACNIFIVKGNIVSTPPTSGTILPGVTRKSISELAHDIGYQVEERDVSVDELLEAEEVFCTGTAVVVKAVETVTFHDKKVKYRTGEAALSTKLHSMLTNIQMGVVEDKKGWMVDIDPCQG
Protein: Protein BASIC PENTACYSTEINE5 (AtBPC5) (GAGA-motif binding transcriptional activator BBR/BPC5) (F4JUI3)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Transcriptional regulator that specifically binds to GA-rich elements (GAGA-repeats) present in regulatory sequences of genes involved in developmental processes.
Subcellular location: Nucleus {ECO:0000250}.
Interaction partners:
- AT-hook motif nuclear-localized protein 6
- Dof zinc finger protein DOF3.6
- Protein RALF-like 34
Sequence:
MESGGQYENGRYKPDYYKGTQSVNVMPKKEQHNALVMNKKIISILAERDAAVKERNEAVAATKEALASRDEALEQRDKALSERDNAIMETESALNALRYRENNLNYILSCAKRGGSQRFITEESHLPNPSPISTIPPEAANTRPTKRKKESKQGKKMGEDLNRPVASPGKKSRKDWDSNDVLVTFDEMTMPVPMCTCTGTARQCYKWGNGGWQSSCCTTTLSEYPLPQMPNKRHSRVGGRKMSGSVFSRLLSRLAGEGHELSSPVDLKNYWARHGTNRYITIK
Protein: NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial (EC 7.1.1.2) (B4DJ81)
Organism: Homo sapiens (Human)
Subcellular location: Mitochondrion inner membrane {ECO:0000256|ARBA:ARBA00004443}; Peripheral membrane protein {ECO:0000256|ARBA:ARBA00004443}; Matrix side {ECO:0000256|ARBA:ARBA00004443}.
Interaction partners:
Sequence:
MEFLLANHPLDCPICDQGGECDLQDQSMMFGNDRSRFLEGKRAVEDKNIGPLVKTIMTRCIQCTRCIRFASEIAGVDDLGTTGRGNDMQVGTYIEKMFMSELSGNIIDICPVGALTSKPYAFTARPWETRKTESIDVMDAVGSNIVVSTRTGEVMRILPRMHEDINEEWISDKTRFAYDGLKRQRLTEPMVRNEKGLLTYTSWEDALSRVAGMLQSFQGKDVAAIAGGLVDAEALVALKDLLNRVDSDTLCTEEVFPTAGAGTDLRSNYLLNTTIAGVEEADVVLLVGTNPRFEAPLFNARIRKSWLHNDLKVALIGSPVDLTYTYDHLGDSPKILQDIASGSHPFSQVLKEAKKPMVVLGSSALQRNDGAAILAAVSSIAQKIRMTSGVTGDWKVMNILHRIASQVAALDLGYKPGVEAIRKNPPKVLFLLGADGGCITRQDLPKDCFIIYQGHHGDVGAPIADVILPGAAYTEKSATYVNTEGRAQQTKVAVTPPGLAREDWKIIRALSEIAGMTLPYDTLDQVRNRLEEVSPNLVRYDDIEGANYFQQANELSKLVNQQLLADPLVPPQLTIKDFYMTDSISRASQTMAKCVKAVTEGAQAVEEPSIC
Protein: Ankyrin repeat and KH domain containing 1 (A0A0G2K916)
Organism: Rattus norvegicus (Rat)
Interaction partners:
Sequence:
MLTDSGGGGTSFEEDLDSVAPRSAPAGASEPPPPGGVGLGIRTVRLFGEAGPAPGVGGGGSAGGGDAALDFKLAAAVLRTGGGGGASGSDEDEVSEVESFILDQEDLDNPVLKTSEIFLSSTAEGADLRTVDPETQARLEALLEAAGIGKLSTADGKAFADPEVLRRLTSSVSCALDEAAAALTRMRAESTHSTGQVDTRSLAEACSDGDVNAVRKLLDEGRSVNEHTEEGESLLCLACSAGYYELAQVLLAMHANVEDRGNKGDITPLMAASSGGYLDIVKLLLLHDADVNSQSATGNTALTYACAGGFIDIVKVLLNEGANIEDHNENGHTPLMEAASAGHVEVARVLLDHGAGINTHSNEFKESALTLACYKGHLDMVRFLLEAGADQEHKTDEMHTALMEACMDGHVEVARLLLDSGAQVNMPADSFESPLTLAACGGHVELAALLIERGANLEEVNDEGYTPLMEAAREGHEEMVALLLAQGANINAQTEETQETALTLACCGGFSEVADFLIKAGADIELGCSTPLMEASQEGHLELVKYLLAAGANVHATTATGDTALTYACENGHTDVADVLLQAGAHLEHESEGGRTPLMKAARAGHLCTVQFLISKGANVNRATANNDHTVVSLACAGGHLAVVELLLAHGADPTHRLKDGSTMLIEAAKGGHTNVVSYLLDYPNNVLSVPTTDVSQLTSPSQDESQVPRVPIHTLAMVVPPQEPDRTSQETSTALLGVQKGASKQKSSSLQVADQDLLPPFHPYQPLECIVEETEGKLNELGQRISAIEKAQLKSLELIQGEPLNKDKIEELKKNREEQVQKKKKILKELQKVERQLQMKTQQQFTKEYLETKGQRDAESPPQQCSHRGVFMAGEEDGSLPEDHSSESPQVDTVSFKDHGIDKQQSPSSAEQINFVPVQPLSSPQSNFSGDLGSNGTNSLVLQKVSGNQQIVGQPQIAIAGHEQGLLVQEPDGLMVATPAQTLTDTLDDLIAAVSTRVPVGSNNPSQTTECPTPESCCQTPSNMVTPSIPPVYPSVDIDAHTESNHDTALTLACAGGHEELVSVLIARDAKIEHRDKKGFTPLILAATAGHVGVVEILLDKGGDIEAQSERTKDTPLSLACSGGRQEVVDLLLARGANKEHRNVSDYTPLSLAASGGYVNIIKILLNAGAEINSRTGSKLGISPLMLAAMNGHVPAVKLLLDMGSDINAQIETNRNTALTLACFQGRAEVVSLLLDRKANVEHRAKTGLTPLMEAASGGYAEVGRVLLDKGADVNAPPVPSSRDTALTIAADKGHYKFCELLINRGAHIDVRNKKGNTPLWLASNGGHFDVVQLLVQAGADVDAADNRKITPLMSAFRKGHVKVVQYLVKEVNQFPSDIECMRYIATITDKELLKKCHQCVETIVKAKDQQAAEANKNASILLKELDLEKSREESRKQALAAKREKRKEKRKKKKEEQKRKQEDEENKPKVNSEQPEGEDEENDEVEQEIPIEPPSATTTTTIGISATSTTFTNVFGKKRANVVTTPSTNRKNKKNKTKESPSTAHLILPEPHMSLAQQKADKNKINGEPRGGGAGGNSDSDNIDSTDCNSESSSGGKSQEFSFTVDVNSTSDRRYPTVVSSQEEKAVTTTSKTQTRLDCEVNANSMSTSYKSLPLSSPTMKLNLTSPKRGQKREEGWKEVVRRSKKLSVPASVVSRIMGRGGCNITAIQDVTGAHIDVDKQKDKNGERMITIRGGTESTRYAVQLINALIQDPAKELEDLIPKNHIRTPASTKSIHTNFSSGVGTTATSSKNTFPLGAPALVTSQATTLSTFQPTNKLSKSVPTNVRSPFPVSLPLAYPHPHFALLAAQTMQQIRHPRLPMAQFGGTFSPSPNTWGPFPVRPVNPGNTSSSPKHNNTARLPNQNGPVLPSESPGLATAGCPITVSSVVAASQQLCMTNSRTPSSVRKQLFGCVPKTSPPAAVISSVTSTSSSLPSVSSTSITSGQVTTTFMPATTPQVQLSSQKVESFSVIPPPKEKASTQDQPLTNLCTPSPTANSCNSSASNTSGAPETHPSSSPTPPSSTTQEEGQPSKVSDLNPVSMPFASNSESAPLTLASPRLVAADNQDTGSLPQLAVPAPRVSHRMQPRGSFYSVVPNATLHQDPQSIFVTNPVPLTPPQGPPTAVQLSSAVNIMNGSQVHINPANKSLQPTFGPATLFNHFSSLFDSGQVPANQGWGDGPLPSRVAADASFTVQSAFLSNSVLGHLENVHPDNSKAPGFRPPSQRVSTSPVGLPSIDPSGNSPSAASPLTSFSGIPGTRVFLQGPAPVGTPSFNRQHFSPHPWTSASNTCDSPIPSVSSGSSSPLSATSAPPTLGQQPKGNSASQDRKIPPPIGTERLARIRQGGSVAQAPVGTSFVAPVGHSGIWSFGVNAVSEGLSGWSQSVIGNHPMHQQLSDPNTFSQHQPMERDDSGMVAPTNIFHQPMGLPISMYGGTIIPSHPQLADVPGGPLFNGLHNPDPAWNPMIKVIQNSTECTDAQQASVLSSVPALKGEIPSPQLTRPKKRVGQPIVASSNQRHQDHLRQKVPAGVQKLTHCPDTSLLPPSDPRGHNSPNSTTLQAGVAEGTEADRGRDNR
Protein: DUF4228 domain protein (F15H18.19) (T10O22.26) (Q9LE02)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Interaction partners:
- AGAA.5
- At1g29190/F28N24_12
- Uncharacterized protein At1g76660
- F3H9.15 protein
- At1g64700
- Basic-leucine zipper transcription factor K
- DUF4228 domain protein
- D-ribose-binding periplasmic protein
- HTH-type transcriptional regulator
- Uncharacterized protein At3g50800
Sequence:
MGNTSSCAPLIISTNSSSGVVKILAPFTGTLEVFSKPIKTSDIVSRHSGHFITDSTLLQISHRVTAVSPDEYLRPRRHLYLLLPTDMLFSVLTQEELSLISNKAAETLNKSRYNHLKRIFPVCIFPMTGDRRRNPSSVNEDRAHDGVEIRETLDEKVLYESKHGSWRPKLETIVES
Protein: Uncharacterized protein (Q385M1)
Organism: Trypanosoma brucei brucei (strain 927/4 GUTat10.1)
Interaction partners:
Sequence:
MSFFEDSADEPPRKRSHAERQSSVQGQSSGRSSQNRVRGCETESDDEDAAPVFSRDASGRVGLRLLQQMQKSTPQVGSSPSVSTGVSNTGKLLVVEDYVPLSVGGFMETSTESAANSLDNIKPGDIMCLRCPSDFRAEPNGNVKRSKVSSSTSCGTTAGINFVKETELTAEERQYGRRLTCEMMNEMFEVSRLDRATNSLEAVFLDGTRKKLKTYAVRPAGFVESDLYKRWKADESSRPVRVVYAAQKLQVTESSGANSGSSRDVDGKTAASAVQSAVWWVVPQLIVRLVEESAGDLFGKKFVVKSIARKDGKIRLEPLRVPDVTVYKDTRDHALPNRGTEHSAVDVFGCAALETVIPRLGEQGLIVQGPMRGELVVVTSRVRSPNGGLEEVKVRSTLTEEEFSVEPHMLCMMVTQR
Protein: Zinc finger protein 571 (Q7Z3V5)
Organism: Homo sapiens (Human)
Function: May be involved in transcriptional regulation.
Subcellular location: Nucleus {ECO:0000305}.
Interaction partners:
Sequence:
MPHLLVTFRDVAIDFSQEEWECLDPAQRDLYRDVMLENYSNLISLDLESSCVTKKLSPEKEIYEMESLQWENMGKRINHHLQYNGLGDNMECKGNLEGQEASQEGLYMCVKITCEEKATESHSTSSTFHRIIPTKEKLYKCKECRQGFSYLSCLIQHEENHNIEKCSEVKKHRNTFSKKPSYIQHQRIQTGEKPYECMECGKAFGRTSDLIQHQKIHTNEKPYQCNACGKAFIRGSQLTEHQRVHTGEKPYECKKCGKAFSYCSQYTLHQRIHSGEKPYECKDCGKAFILGSQLTYHQRIHSGEKPYECKECGKAFILGSHLTYHQRVHTGEKPYICKECGKAFLCASQLNEHQRIHTGEKPYECKECGKTFFRGSQLTYHLRVHSGERPYKCKECGKAFISNSNLIQHQRIHTGEKPYKCKECGKAFICGKQLSEHQRIHTGEKPFECKECGKAFIRVAYLTQHEKIHGEKHYECKECGKTFVRATQLTYHQRIHTGEKPYKCKECDKAFIYGSQLSEHQRIHRGEKPYECKQCGKAFIRGSHLTEHLRTHTGEKPYECKECGRAFSRGSELTLHQRIHTGEKPYTCVQCGKDFRCPSQLTQHTRLHN
Protein: E3 ubiquitin-protein ligase APD3 (EC 2.3.2.27) (Protein ABERRANT POLLEN DEVELOPMENT 3) (B3H754)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Involved in pollen mitosis II (PMII) regulation during male gametogenesis.
Subcellular location: Endomembrane system {ECO:0000250|UniProtKB:Q0WS06}; Multi-pass membrane protein {ECO:0000255}. Vacuole membrane {ECO:0000250|UniProtKB:Q0WS06}; Multi-pass membrane protein {ECO:0000255}.
Interaction partners:
- Probable protein phosphatase 2C 79
- Probable protein phosphatase 2C 63
- Probable protein phosphatase 2C 68
- Probable protein phosphatase 2C 46
- Probable protein phosphatase 2C 64
- Probable protein phosphatase 2C 42
- Probable protein phosphatase 2C 38
- Probable protein phosphatase 2C 67
- Homeodomain-like superfamily protein
- Probable protein phosphatase 2C 48
Sequence:
MGSIRGDLQPLFVMPPPPLDEDCDDIFNSDESSWGLLSLSCFGIIMGLWFFASVCLIFGVYGSETVWLGPNSSILVKPSSIFVKSIKVKELDFSKPGLQLYGFNGQSTPSGYFVNWTESRVLSVSQNSYKGWPYYLNRGTHMNISYNILPKGSAVRLVITEGSQVIGMPFFYRSSLKDIAFRDTAWSWNLIQGSGMIQLDISKSKGYYLTVANLKRKDIEVELDIDVKAVLYDTKQTSYNCSFSNGECSFKMNERYPVENYAVVTSPALGQGVSIDDEWYIELSYQPRLIAYGSFTGVLLSFMLVAIHFCNKLKCCGGEGFLSGDDSVRTCLLADKGDNDCCNDVEASNKSLCAICFDAPRDCCFLPCGHCVSCYQCGTKIKRTKGRCPICRKKMIHVKRIYTA
Protein: AT01047p (Q7K1J3)
Organism: Drosophila melanogaster (Fruit fly)
Subcellular location: Membrane {ECO:0000256|ARBA:ARBA00004370}.
Interaction partners:
Sequence:
YIVPSNSGRQLHKTFVPNPKRKPIFRSVSIRTVFQSAQMDMNYQYKKDHSFDKRRNEGDKIRRKYPDRVPVIVEKAPKTRYAELDKKKYLVPADLTVGQFYFLIRKRINLRPDDALFFFVNNVIPPTSATMGALYQEHFDKDYFLYISYTDENVYGRQ
Protein: Protein disulfide isomerase, putative (EC 5.3.4.1) (Q582J4)
Organism: Trypanosoma brucei brucei (strain 927/4 GUTat10.1)
Interaction partners:
- Trypanothione reductase
- Tryparedoxin
- Tryparedoxin
- Monothiol glutaredoxin, putative
Sequence:
MRNSFALLLLSVAIAFVTVGSFADEAKDSVELTPDNFDKVALDTEKHVFVMFYAPWCGHCKRLKPKWEELAKEMKDETSVVIARLDADKHRNVAERFDVRGYPTLLLFARSKKEGLRYEGARDVAALKEFVKSNM
Protein: 32 kDa heat shock protein (Protein 4-1) (P54658)
Organism: Dictyostelium discoideum (Social amoeba)
Interaction partners:
- Probable serine/threonine-protein kinase fhkA
- Protein BUD31 homolog
- Ribosome production factor 2 homolog
- Nucleolar protein 58
Sequence:
MMQFFGTIVTKEEPVNLELDEGDIFHLTKAIIHPKSQGKGKVYLTAVISLMEEDEMEEDDVDDEEESPREDIVEIPIGILEAGKIDQIDLNLHYNFGQIVRFELQAENGAGYVVALSGSVITMEQGGCDDEDCDDEHCINHEDDEEIDSDEEFGDSDQDEEDSDDEEIPQLIAPATKKGKITEISEVPESKKEKTPEPKKVPEPKKEQVKQPTQPQQKKAAAQQPEKANNKPAAASPAKPQNNQSKNAPKQPQQQQQSPAKNNNNKRPQNQNENNKKKQKN
Protein: Torsin-1A-interacting protein 1 (Lamina-associated polypeptide 1B) (LAP1B) (Lamina-associated polypeptide 1C) (LAP1C) (Q5PQX1)
Organism: Rattus norvegicus (Rat)
Function: Required for nuclear membrane integrity. Induces TOR1A and TOR1B ATPase activity and is required for their location on the nuclear membrane. Binds to A- and B-type lamins. Possible role in membrane attachment and assembly of the nuclear lamina.
Subcellular location: Nucleus inner membrane {ECO:0000269|PubMed:16128803, ECO:0000269|PubMed:7721789}; Single-pass membrane protein {ECO:0000269|PubMed:16128803, ECO:0000269|PubMed:7721789}.
Interaction partners:
- Torsin-1A
- Torsin-3A
- Tudor domain-containing protein 5
- Torsin.
Sequence:
MAGERWRAEGLGEGWAIYVTPRAPIREGRRRLATQNGDGSDAPAYETHPSRHGRREVRFSEEPPEVYGDFEPRAAKERSPGERRTPPEKFRSDSAKEEVRESAYNLRSRQRRQRGPQEAEEMKTRRSTRLEQHSQQAQQQLSPATSGRGLRDAQSLSEDRGEDEPSSQPVTSQTVSKKTVRTPETSVMSEDPISNLCRPPLRSPRPDASIVQHINPFEEGETEDDLESSYSDVTIRIRSRDSVESRDEAAVAAGHHPDSLWGLPHSRGDFTAHENQPSLLPTGCQKNPQEWVEQAVRMRTRMAYNNIQKSDFGNQSPSTSRQQAAVQPPDESSVKIKWWLLILVAALAMGIYWFFHTPVVETTAVQEFQNQMKQLQSKYQSQDEKLWKRGTTFLEKHLNSSLPRPQPAILLLTAAQDAAEVLKCLSEQIADAYSSFRSVRAIRIDGAGKAAQDSDLVKHEVDQELTDGFRNGQNAAVVHRFESLPAGSTLIFYKYCDHENAAFKDVALVLTVLLEEQTLEASLGLKEIEEKVRDFLKVKFTSSDTANSYNHMDPDKLNGLWSRISHLVLPVQPENALKAGSCL
Protein: DNA polymerase alpha catalytic subunit (EC 2.7.7.7) (Q9FHA3)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Polymerase alpha in a complex with DNA primase is a replicative polymerase.
Subcellular location: Nucleus {ECO:0000250}.
Interaction partners:
- Protein ENHANCER OF LHP1 1
- Probable DNA primase large subunit
- DNA polymerase epsilon subunit B
- DNA polymerase epsilon catalytic subunit A
- DNA polymerase delta small subunit
- DNA primase
- DNA polymerase alpha subunit B
- DNA replication licensing factor MCM4
- DNA replication licensing factor MCM3
- DNA polymerase epsilon catalytic subunit B
Sequence:
MSGDNSTETGRRRSRGAEASSRKDTLERLKAIRQGGIRSASGGGYDIRLQKPIFDTVDDEEYDALVSRRREEARGFVVEDGEGGDLGYLDEGEEEDWSKPSGPESTDESDDGGRFSGRLKKKKKGKEQTQQPQVKKVNPALKAAATITGEGRLSSMFTSSSFKKVKETDKAQYEGILDEIIAQVTPDESDRKKHTRRKLPGTVPVTIFKNKKLFSVASSMGMKESEPTPSTYEGDSVSMDNELMKEEDMKESEVIPSETMELLGSDIVKEDGSNKIRKTEVKSELGVKEVFTLNATIDMKEKDSALSATAGWKEAMGKVGTENGALLGSSSEGKTEFDLDADGSLRFFILDAYEEAFGASMGTIYLFGKVKMGDTYKSCCVVVKNIQRCVYAIPNDSIFPSHELIMLEQEVKDSRLSPESFRGKLHEMASKLKNEIAQELLQLNVSNFSMAPVKRNYAFERPDVPAGEQYVLKINYSFKDRPLPEDLKGESFSALLGSHTSALEHFILKRKIMGPCWLKISSFSTCSPSEGVSWCKFEVTVQSPKDITILVSEEKVVHPPAVVTAINLKTIVNEKQNISEIVSASVLCFHNAKIDVPMPAPERKRSGILSHFTVVRNPEGTGYPIGWKKEVSDRNSKNGCNVLSIENSERALLNRLFLELNKLDSDILVGHNISGFDLDVLLQRAQACKVQSSMWSKIGRLKRSFMPKLKGNSNYGSGATPGLMSCIAGRLLCDTDLCSRDLLKEVSYSLTDLSKTQLNRDRKEIAPNDIPKMFQSSKTLVELIECGETDAWLSMELMFHLSVLPLTLQLTNISGNLWGKTLQGARAQRIEYYLLHTFHSKKFILPDKISQRMKEIKSSKRRMDYAPEDRNVDELDADLTLENDPSKGSKTKKGPAYAGGLVLEPKRGLYDKYVLLLDFNSLYPSIIQEYNICFTTIPRSEDGVPRLPSSQTPGILPKLMEHLVSIRKSVKLKMKKETGLKYWELDIRQQALKLTANSMYGCLGFSNSRFYAKPLAELITLQGRDILQRTVDLVQNHLNLEVIYGDTDSIMIHSGLDDIEEVKAIKSKVIQEVNKKYRCLKIDCDGIYKRMLLLRKKKYAAVKLQFKDGKPCEDIERKGVDMVRRDWSLLSKEIGDLCLSKILYGGSCEDVVEAIHNELMKIKEEMRNGQVALEKYVITKTLTKPPAAYPDSKSQPHVQVALRMRQRGYKEGFNAKDTVPYIICYEQGNASSASSAGIAERARHPDEVKSEGSRWLVDIDYYLAQQIHPVVSRLCAEIQGTSPERLAECLGLDPSKYRSKSNDATSSDPSTSLLFATSDEERYKSCEPLALTCPSCSTAFNCPSIISSVCASISKKPATPETEESDSTFWLKLHCPKCQQEDSTGIISPAMIANQVKRQIDGFVSMYYKGIMVCEDESCKHTTRSPNFRLLGERERGTVCPNYPNCNGTLLRKYTEADLYKQLSYFCHILDTQCSLEKMDVGVRIQVEKAMTKIRPAVKSAAAITRSSRDRCAYGWMQLTDIVI
Protein: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (BPG-independent PGAM) (Phosphoglyceromutase) (iPGM) (EC 5.4.2.12) (P37689)
Organism: Escherichia coli (strain K12)
Function: Catalyzes the interconversion of 2-phosphoglycerate (2-PGA) and 3-phosphoglycerate (3-PGA).
Interaction partners:
- Phosphoglycerate kinase
- Enolase
- 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase
- Glucose-6-phosphate isomerase
- Triosephosphate isomerase
- Fructose-bisphosphate aldolase class 2
- Probable phosphoglycerate mutase GpmB
- Glycerate 3-kinase
- Glycerate 2-kinase
- D-3-phosphoglycerate dehydrogenase
Sequence:
MLVSKKPMVLVILDGYGYREEQQDNAIFSAKTPVMDALWANRPHTLIDASGLEVGLPDRQMGNSEVGHVNLGAGRIVYQDLTRLDVEIKDRAFFANPVLTGAVDKAKNAGKAVHIMGLLSAGGVHSHEDHIMAMVELAAERGAEKIYLHAFLDGRDTPPRSAESSLKKFEEKFAALGKGRVASIIGRYYAMDRDNRWDRVEKAYDLLTLAQGEFQADTAVAGLQAAYARDENDEFVKATVIRAEGQPDAAMEDGDALIFMNFRADRAREITRAFVNADFDGFARKKVVNVDFVMLTEYAADIKTAVAYPPASLVNTFGEWMAKNDKTQLRISETEKYAHVTFFFNGGVEESFKGEDRILINSPKVATYDLQPEMSSAELTEKLVAAIKSGKYDTIICNYPNGDMVGHTGVMEAAVKAVEALDHCVEEVAKAVESVGGQLLITADHGNAEQMRDPATGQAHTAHTNLPVPLIYVGDKNVKAVEGGKLSDIAPTMLSLMGMEIPQEMTGKPLFIVE