wanglab/gogpt-training-data huggingface dataset:
Protein: Uncharacterized protein, isoform H (EC 3.1.2.22) (A0A4D6K2Q0)
Organism: Drosophila melanogaster (Fruit fly)
Interaction partners:
- palmitoyl-protein hydrolase
- Ras-like protein 1
Sequence:
MFSISELCCMFCCPPCPGPIAAKLAFQPPEPTYKLTPADDTNIRYNLQLFDRAEWQYSEREKSKVEAFFTRTSRGNLITCIYVRCSKNAKYTLLFSHGNAVDLGQMSSFYLTLGSQINCNIFGYDYSGYGMSGGKPSEKNLYADIEAAWQAMRTRFNISPETIILYGQSIGTVPTVDLASRHEVGAVILHSPLMSGLRVVFRNTKRTWFFDAFPSIDKVAKVKAPVLVIHGTDDEVIDFSHGIGIYERCPKTVEPFWVEGAGHNDVELHPHYYERLRKFLSVELVKXQLKNNVDGGVSDTTSGVISNSNPAAGSASLSSKHPNPAPAAGSETSKKNVDTNVKRIENDGL
Protein: RIC3 acetylcholine receptor chaperone, isoform K (E1JGP8)
Organism: Drosophila melanogaster (Fruit fly)
Subcellular location: Endoplasmic reticulum membrane {ECO:0000256|ARBA:ARBA00004586}.
Interaction partners:
Sequence:
MPATATSKPRAPLVEEGMTPKKTALIIVTVIGCIAILWPKVFHPMMFGGVPPSQPNFKDPRAAPGGLRQERPAHLHPESIYQAMRERGRAIPATPTVPILERKTSPSNPPPRIVDGRPGPIPGMRPPMGAGALHQPQQRGSSMGFLMPLYTIGIVVFFGYTLMKIMFKKQVPNDPYGAAPPNPAFRQEVFGSQNHSQVEDLGGSKLGWREHQTIVTAIQGLIDAADEQLNGQDKQRATSDTETDSNKKNDNEKTREQPLDKQNLSNGHASSTDQNPEQETVAKGARKRRDLSAEQELTSKLEDNLPEPQSIYLEGALAHESQILVADSQIKREEVYDSELNGSAEEPAIILSSRMTLSLINLDANQQNGNAGKSAVESPLADDIEIIGHDEQ
Protein: Adenosine 3'-phospho 5'-phosphosulfate transporter 1 (Solute carrier family 35 member B2) (Q91ZN5)
Organism: Mus musculus (Mouse)
Function: Mediates the transport of adenosine 3'-phospho 5'-phosphosulfate (PAPS), from cytosol into Golgi. PAPS is a universal sulfuryl donor for sulfation events that take place in the Golgi (By similarity).
Subcellular location: Golgi apparatus membrane {ECO:0000250|UniProtKB:Q8TB61}; Multi-pass membrane protein {ECO:0000255}.
Interaction partners:
- Large ribosomal subunit protein eL15
- Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 3
- Exostosin-2
- Solute carrier family 35 member C2
- Exostosin-like 3
- Beta-1,4-galactosyltransferase 7
- GDP-fucose transporter 1
- Nucleotide sugar transporter SLC35B4
- Protein-tyrosine sulfotransferase 2
Sequence:
MDARWWAVVVLATLPSLGAGGESPEAPPQSWTQLWLFRFLLNVAGYASFMVPGYLLVQYLRRKNYLETGRGLCFPLVKACVFGNEPKAPDEVLLAPRTETAESTPSWQVLKLVFCASGLQVSYLTWGILQERVMTGSYGATATSPGEHFTDSQFLVLMNRVLALVVAGLYCVLRKQPRHGAPMYRYSFASLSNVLSSWCQYEALKFVSFPTQVLAKASKVIPVMMMGKLVSRRSYEHWEYLTAGLISIGVSMFLLSSGPEPRSSPATTLSGLVLLAGYIAFDSFTSNWQDALFAYKMSSVQMMFGVNLFSCLFTVGSLLEQGALLEGARFMGRHSEFALHALLLSICSAFGQLFIFYTIGQFGAAVFTIIMTLRQAIAILLSCLLYGHTVTVVGGLGVAVVFTALLLRVYARGRKQRGKKAVPTEPPVQKV
Protein: Probable UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) (UDP-glucose pyrophosphorylase) (UDPGP) (UGPase) (P78811)
Organism: Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Function: Plays a central role as a glucosyl donor in cellular metabolic pathways.
Subcellular location: Cytoplasm {ECO:0000269|PubMed:16823372}. Nucleus {ECO:0000269|PubMed:16823372}.
Interaction partners:
- Phosphoglucomutase
- Galactose-1-phosphate uridylyltransferase
- Probable phosphoribomutase
- Alpha,alpha-trehalose-phosphate synthase
- Putative alpha,alpha-trehalose-phosphate synthase 106 kDa subunit
- Bifunctional protein gal10
- UDP-glucose 4-epimerase uge1
- Putative alpha,alpha-trehalose-phosphate synthase 100 kDa subunit
- Trehalose-phosphatase
- Trehalose-phosphatase
Sequence:
MDLAPRPLGRQHSKSQSAFAFDNTATSIAASTMKNELNHLASTVKDPLAKKAFQKEMDNFFSLFSRYLQEDARGSEINWDLVESPKPEQVVEYDTITEAGGLSRDYLNKLAVLKLNGGLGTTMGCVGPKSIIEVRDGNSFLDLSVRQIEHLNRKYNVNVPFVLMNSFNTDEATAKVIKKYEAHKIDILTFNQSRYPRVHKETLLPVPHTADSAIDEWYPPGHGDVFEALTNSGIIDTLIAQGKEYLFVSNIDNLGAVVDLNILNHMVETNAEYLMELTNKTKADVKGGTLIDYDGNVRLLEIAQVPPQHVEEFKSIKKFKYFNTNNLWFHLPSVKRVVNNHELSMEIIPNKKTIKHKGENINIIQLETAAGAAIRHFKNAHGVNVPRRRFLPVKTCSDLLLVKSDLYSINHGQVEMNPRRFGGTAPLVKLGAHFKKVADFSAHIPSIPKILELDHLTITGDVNIGRNVTLKGTVIIVASDANRIDIPNGSVLENCVITGNLNILEH
Protein: ATP phosphoribosyltransferase 1, chloroplastic (ATP-PRTase 1) (AtATP-PRT1) (EC 2.4.2.17) (Q9S762)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Catalyzes the condensation of ATP and 5-phosphoribose 1-diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP).
Subcellular location: Plastid, chloroplast {ECO:0000305}.
Interaction partners:
- Histidine biosynthesis bifunctional protein hisIE, chloroplastic
- 1-
- Histidinol dehydrogenase, chloroplastic
- Imidazole glycerol phosphate synthase hisHF, chloroplastic
- Histidinol-phosphate aminotransferase 1, chloroplastic
- Imidazoleglycerol-phosphate dehydratase 1, chloroplastic
- Imidazoleglycerol-phosphate dehydratase 2, chloroplastic
- Helicase protein with RING/U-box domain-containing protein
- Ribose-phosphate pyrophosphokinase 1, chloroplastic
- Histidinol-phosphate aminotransferase 2, chloroplastic
Sequence:
MSLLLPTNLQQYPSSSSFPSSTPILSPPPSTAFSVIVPRRRCLRLVTSCVSTVQSSVATNGSSPAPAPAAVVVERDQIRLGLPSKGRMAADAIDLLKDCQLFVKQVNPRQYVAQIPQLPNTEVWFQRPKDIVRKLLSGDLDLGIVGLDTLSEYGQENEDLIIVHEALNFGDCHLSIAIPNYGIFENINSLKELAQMPQWSEERPLRLATGFTYLGPKFMKENGIKHVVFSTADGALEAAPAMGIADAILDLVSSGITLKENNLKEIEGGVVLESQAALVASRRALNERKGALNTVHEILERLEAHLKADGQFTVVANMRGNSAQEVAERVLSQPSLSGLQGPTISPVYCTQNGKVSVDYYAIVICVPKKALYDSVKQLRAAGGSGVLVSPLTYIFDEDTPRWGQLLRNLGI
Protein: Myocyte-specific enhancer factor 2 (D-mef2) (MADS domain transcription factor) (P40791)
Organism: Drosophila melanogaster (Fruit fly)
Function: Transcription factor that could be a key player in early mesoderm differentiation and may be required for subsequent cell fate specifications within the somatic and visceral/heart mesodermal layers. Essential for myoblast fusion and consequently muscle formation in adults. During embryonic and pupal development, binds to the enhancer of the myoblast fusion gene sing and activates its transcription.
Subcellular location: Nucleus {ECO:0000255|PROSITE-ProRule:PRU00251}.
Interaction partners:
- Muscle-specific homeobox protein tinman
- Mitogen-activated protein kinase p38b
- Protein twist
- Mitogen-activated protein kinase p38a
- Zinc finger protein 1
- Homeobox protein bagpipe
- Myosin heavy chain, muscle
- Extracellular signal-regulated kinase 7
- histone acetyltransferase
- UT01525p
Sequence:
MGRKKIQISRITDERNRQVTFNKRKFGVMKKAYELSVLCDCEIALIIFSSSNKLYQYASTDMDRVLLKYTEYNEPHESLTNKNIIEKENKNGVMSPDSPEAETDYTLTPRTEAKYNKIDEEFQNMMQRNQMAIGGAGAPRQLPNSSYTLPVSVPVPGSYGDNLLQASPQMSHTNISPRPSSSETDSGGMSLIIYPSGSMLEMSNGYPHSHSPLVGSPSPGPSPGIAHHLSIKQQSPGSQNGRASNLRVVIPPTIAPIPPNMSAPDDVGYADQRQSQTSLNTPVVTLQTPIPALTSYSFGAQDFSSSGVMNSADIMSLNTWHQGLVPHSSLSHLAVSNSTPPPATSPVSIKVKAEPQSPPRDLSASGHQQNSNGSTGSGGSSSSTSSNASGGAGGGGAVSAANVITHLNNVSVLAGGPSGQGGGGGGGGSNGNVEQATNLSVLSHAQQHHLGMPNSRPSSTGHITPTPGHDKYEGYPYRALMGHNPRWNLNFAGAPSSDQDVRLAAVAVQQQQQQPHQQQQLGDYDAPNHKRPRISGGWGT
Protein: Mitochondrial carnitine/acylcarnitine carrier protein (Carnitine/acylcarnitine translocase) (CAC) (CACT) (Solute carrier family 25 member 20) (O43772)
Organism: Homo sapiens (Human)
Function: Mediates the electroneutral exchange of acylcarnitines (O-acyl-(R)-carnitine or L-acylcarnitine) of different acyl chain lengths (ranging from O-acetyl-(R)-carnitine to long-chain O-acyl-(R)-carnitines) with free carnitine ((R)-carnitine or L-carnitine) across the mitochondrial inner membrane, via a ping-pong mechanism (Probable). Key player in the mitochondrial oxidation pathway, it translocates the fatty acids in the form of acylcarnitines into the mitochondrial matrix, where the carnitine palmitoyltransferase 2 (CPT-2) activates them to undergo fatty acid beta-oxidation (Probable). Catalyzes the unidirectional transport (uniport) of carnitine at lower rates than the antiport (exchange).
Subcellular location: Mitochondrion inner membrane; Multi-pass membrane protein.
Interaction partners:
- Carnitine O-palmitoyltransferase 2, mitochondrial
- Carnitine O-palmitoyltransferase 1, liver isoform
- Carnitine O-palmitoyltransferase 1, muscle isoform
- Palmitoyl thioesterase CPT1C
- Beta-alanine-activating enzyme
- Carnitine O-acetyltransferase
- Mitochondrial basic amino acids transporter
- Gamma-secretase subunit APH-1A
- Short-chain specific acyl-CoA dehydrogenase, mitochondrial
- Very long-chain specific acyl-CoA dehydrogenase, mitochondrial
Sequence:
MADQPKPISPLKNLLAGGFGGVCLVFVGHPLDTVKVRLQTQPPSLPGQPPMYSGTFDCFRKTLFREGITGLYRGMAAPIIGVTPMFAVCFFGFGLGKKLQQKHPEDVLSYPQLFAAGMLSGVFTTGIMTPGERIKCLLQIQASSGESKYTGTLDCAKKLYQEFGIRGIYKGTVLTLMRDVPASGMYFMTYEWLKNIFTPEGKRVSELSAPRILVAGGIAGIFNWAVAIPPDVLKSRFQTAPPGKYPNGFRDVLRELIRDEGVTSLYKGFNAVMIRAFPANAACFLGFEVAMKFLNWATPNL
Protein: Kallikrein-10 (EC 3.4.21.-) (Normal epithelial cell-specific 1) (Protease serine-like 1) (O43240)
Organism: Homo sapiens (Human)
Function: Has a tumor-suppressor role for NES1 in breast and prostate cancer.
Subcellular location: Secreted {ECO:0000305}.
Interaction partners:
- Kallikrein-11
- Kallikrein-7
- Exportin-1
- Chromodomain-helicase-DNA-binding protein 3
Sequence:
MRAPHLHLSAASGARALAKLLPLLMAQLWAAEAALLPQNDTRLDPEAYGSPCARGSQPWQVSLFNGLSFHCAGVLVDQSWVLTAAHCGNKPLWARVGDDHLLLLQGEQLRRTTRSVVHPKYHQGSGPILPRRTDEHDLMLLKLARPVVLGPRVRALQLPYRCAQPGDQCQVAGWGTTAARRVKYNKGLTCSSITILSPKECEVFYPGVVTNNMICAGLDRGQDPCQSDSGGPLVCDETLQGILSWGVYPCGSAQHPAVYTQICKYMSWINKVIRSN
Protein: Eukaryotic aspartyl protease family protein (F4K4L3)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Interaction partners:
- Eukaryotic aspartyl protease family protein
- Phosphatidylinositol/phosphatidylcholine transfer protein SFH11
- Lariat debranching enzyme
- Aspartic proteinase A2
- THO complex subunit 4D
- E3 ubiquitin-protein ligase RDUF2
- Eukaryotic aspartyl protease family protein
- Heavy metal-associated isoprenylated plant protein 7
- E3 ubiquitin-protein ligase RDUF1
Sequence:
MDRSSLLLLLFTTTTISIFFFDLTTADESPMIFPLSYSSLPPRPRVEDFRRRRLHQSQLPNAHMKLYDDLLSNGYYTTRLWIGTPPQEFALIVDTGSTVTYVPCSTCKQCGKHQDPKFQPELSTSYQALKCNPDCNCDDEGKLCVYERRYAEMSSSSGVLSEDLISFGNESQLSPQRAVFGCENEETGDLFSQRADGIMGLGRGKLSVVDQLVDKGVIEDVFSLCYGGMEVGGGAMVLGKISPPPGMVFSHSDPFRSPYYNIDLKQMHVAGKSLKLNPKVFNGKHGTVLDSGTTYAYFPKEAFIAIKDAVIKEIPSLKRIHGPDPNYDDVCFSGAGRDVAEIHNFFPEIAMEFGNGQKLILSPENYLFRHTKVRGAYCLGIFPDRDSTTLLGGIVVRNTLVTYDRENDKLGFLKTNCSDIWRRLAAPESPAPTSPISQNKSSNISPSPATSESPTSHLPGVFRVGVITFEVSISVNNSSLKPKFSEIADFIAHELDIQSAQVRLLNFSSSGNEYRLKWGVFPPQSSEYISNTTALNIMLLLKENRLRLPGQFGSYKLLEWKAEQKKKQSWWEKHLLGVVGGAMISLLVTSVMIKLALVWRRRKQEEATYEPVNAAIKEQELQPLSSETSNA
Protein: NTF2-related export protein (Q582J1)
Organism: Trypanosoma brucei brucei (strain 927/4 GUTat10.1)
Subcellular location: Cytoplasm {ECO:0000256|RuleBase:RU369002}. Nucleus {ECO:0000256|RuleBase:RU369002}.
Interaction partners:
- mRNA export factor MEX67
- Nuclear RNA export factor 1/2
- Nucleoporin
- Nucleoporin NSP1-like C-terminal domain-containing protein
- Nucleoporin
- Poly
- Nuclear transport factor 2
- RNA helicase
Sequence:
MSEYADCTEVAKKALEFRQQFYQLLDNPERRGDIVALYAPNTPLLCEWNGHALPDTASIAAYLGGLPRTNHKVDCVDAQPLPGNERADSFLMTVHGVVTYDDEHKREFFQRFVIRKVEERYYIMNDYYRWLSEKE
Protein: Gamma-glutamylcyclotransferase 2-1 (AtGGCT2;1) (EC 4.3.2.9) (Gamma-glutamyl cyclotransferase 2;1) (Q8GY54)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Catalyzes the formation of 5-oxoproline from gamma-glutamyl dipeptides and plays a significant role in glutathione (GSH) homeostasis. Converts both GSH and gamma-glutamyl-L-alanine to 5-oxoproline in vitro. Plays a role in detoxification of heavy metals and metalloids by recycling glutamate and maintaining GSH homeostasis.
Subcellular location: Cytoplasm {ECO:0000269|PubMed:24214398}.
Interaction partners:
- 5-oxoprolinase 1
- Leucine aminopeptidase 1
- Glutathione synthetase, chloroplastic
- Glutamate--cysteine ligase, chloroplastic
- Glutathione hydrolase 2
- Glutathione hydrolase 1
- Putative inactive glutathione hydrolase 4
- Glutathione hydrolase 3
- Gamma-glutamylcyclotransferase 2-3
- Gamma-glutamylcyclotransferase 2-2
Sequence:
MVLWVFGYGSLIWNPGFDFDEKLIGYIKDYKRVFDLACIDHRGTPEHPARTCTLEQSTGAICWGAAYCVRGGPEKEKLAMEYLERRECEYDSKTLVEFYTENDTSTPIVTGVIVFTSTPDKVSNKYYLGPAPLEEMARQIATASGPCGNNREYLFKLEKAMFDIEHEEEYVIELANEVRKQLDLPEEVKALLKPIVSHVSVKSQAHVSTRQRVFAS
Protein: Sodium/potassium-transporting ATPase subunit beta-1-interacting protein 4 (Na(+)/K(+)-transporting ATPase subunit beta-1-interacting protein 4) (Protein FAM77A) (Q8IVV8)
Organism: Homo sapiens (Human)
Subcellular location: Cell membrane {ECO:0000305}; Multi-pass membrane protein {ECO:0000305}.
Interaction partners:
- Sodium/potassium-transporting ATPase subunit beta-1
Sequence:
MGSCSGRCALVVLCAFQLVAALERQVFDFLGYQWAPILANFVHIIIVILGLFGTIQYRLRYVMVYTLWAAVWVTWNVFIICFYLEVGGLLKDSELLTFSLSRHRSWWRERWPGCLHEEVPAVGLGAPHGQALVSGAGCALEPSYVEALHSCLQILIALLGFVCGCQVVSVFTEEEDSFDFIGGFDPFPLYHVNEKPSSLLSKQVYLPA
Protein: Trio (Q7KY09)
Organism: Drosophila melanogaster (Fruit fly)
Subcellular location: Cytoplasm {ECO:0000256|ARBA:ARBA00004496}.
Interaction partners:
Sequence:
MDGQRARDLLTLLQERVVFLTGGRDRRGGPLLCFPATPRRDRLKPEDLRRLLSYLISIPSDAAKNLGFTVIIDMRGNGNCSTNVKTILKVLQEHFSANIHNVVIIKPDNFWQKQRASISSHKYKFETTTVSIESLNKIVESHQLTGDFEGQQLYDHQQWTDARLAIEDFFWQAGDMADRIDDLQEDLNRNDFAEDVPLARHAIDHHNEMRKKITKLPIEDLDMQGKKLLAKINAMAPPGGQAPTNSGGPDMDSGPSSAGQQSQPSQQSRSVGGNPDMSAAVNKALRQIELIHTGQEKLLMLCQHKKVKLDQCFQWRLFEQDCEKMFDWILHNRDVFQMSYVEIGHNYSVAKSLQDEHQKFAVASMNVSVNIDRILAVAARLIESQHYAAQHIKTLAQRLDRTWKDFAAGLDERTAVLQLSVLFHHKAEQYCNSVASWAAACQASQPLPSDIQSLETAIRTHQSLYEAMCQAYTEVHSTSKKLLYQLDHLVQVCNQPPPPGVPDHRKNSNNGSFNKYERQNPAADYSEGASHVLAVIHQILSHHRTLEAKWHQERLRLHQTLALRLFQEDVKQVLDWLKNHGEVFLRKNTGIGRNFHKARVYQTSHDNFENVAQNTYSNAQKLLAAADELARSGEADPNEIYSVARELELQVGSFAERVEQRRRRLDMAVIFYTHEKDVTAWIDKLRTDVSTDETRLSQENLEGIERILRQYQRDQQESSVNVCLTTISQGEALLQEMRSLEYADNTGSIAALEATLEKLNKQKVELEELWSARKFRADLILRLRYFERDARLLSVQMEMWSEELQHADLSRDYQKAEQLIRMHNESVTEIQNATYEVVQQGQDLLQLFENAGFISMADATHTAQARIEYLLDFLREREIDLEEMSEAKRAKLEQAVQLCQFQNDANQVISWIRNGEAMLVASFVTPNSLQEAEQLRKGHEQFQIAIEKTHTSAVQVKYRADALINANHYDPLSIDEISDDVTKKWQQLVTYAEERHKLVTASINFYKTAEQVCSVLDSLEREYKREDDWCDGGGGSDKAQAIVQLISKHQEQKEAFLKACTLARRTAETFLKYANRSQQCYQYKGNCEGHVKSKLDKLLTQENQVLDYWTLRKKSLDQCQQFVLFERSAKQAIEWIHNTGEAYLSSRSNLVGISKEETEGLLKEHNEFRSTAKETRERVKLLIQLADSLVEKGHAHASDIKQWVASVDQRYKDFSNRMDSYCEQLEKSLGMSQQQLLLGSDGNSSISSSSGDRHSDPTLEAKLNSSNKENKEINEEKRKSARRKEFIMAELMQTERAYVNDLATCIKCFLEEFRAGKSVPSALIGQEDVIFGNIKEIHHFHQKIFLRELEKYETMPEDVGHCFVTWASKFDMYVHYCKNKPTSNNLLVQHGGSFFEELQRRLEVDHPLPAYLIKPVQRITKYQLLLKDLLSCCEESHGEIKEGLEVMLNVPKKANDAMHLSLLENCDVSVDKLGEVVLQDAFQAWDTKQIIRKGRERRVFLFELYLLFAKEVKESNVVKYQFKSKLMTTDMGITEHIEGDETKFAVWTGRSPMLSDCRIVLKATSLETKQIWVKKLREVMQETCFSGTSLTLPKSPAKHSGSSQRSSRDLDEQLTENDHDRCSLASFGSGNTTDSDNKLGNQEATWVVADYIATSGSNELSVSKGQQVEIVEPPTAGEPDFCLVRLNPQHDDAAVQEGLVPVSVLKPPPGSHKHGSGTAANAASAAGSQKSDMQDQSNRSKADALSSSTKRRGFSGRNWLPLMNRKGTDKPPSSKPLVKKPSEKNLRTPQKHAEELAEQQNQQPGASPATVLPSSQFPSSTQHPGGAGAGDYEPDEEVGLELPPPMKPIQEPHLIANGPPAFAKDAKESSGNMASPGKMDGNPLSEIEEIVKTTTEQHESNSRVDGGGGVENASTNGHGRSHDNNDESHTAVSDKAAALKKRQCVFAELMSTEEAYVQDLHEIVNGYMTEINNTNSDIPMPEDLKGGKMKLVFNNIKDIYEWHRDFFLRALRNCQKSPADLGPLIKRSATKFALYYTYCSNKPLSEYIVSAHYQYFDSIRQKLGHRLDLSNLIIKPVQRITKYELLIKEIIKATEGAGLYKEVPMLQEAYQQMKVVVKTVNDMMVVLRSLQDFDGEITAQGSLLMQGPMNCVVDAAQKHRELQVFLFQQIIIFADIEKTKNQYASPIFKYRSHIQLNHMQMKELGDCRFQIRSTDPKIPEMTIICQAASQENYAGWRDMLNKILQQQNDLIFMLSNPLSTKNK
Protein: At1g48460 (tRNA-processing ribonuclease BN) (Q5PNY9)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Interaction partners:
Sequence:
MESKAICLGFLPPRLRFSSPRLLSLPPSPPASSTFATRHKLDSRQTLLWNKPQLSRVRVACSSSQSDSRPEKKQSDKSNYARAELFRGKSGSVSFNGLTHQLVEESKLVSAPFQEEKGSFLWVLAPVVLISSLILPQFFLSGIIEATFKNDTVAEIVTSFCFETVFYAGLAIFLSVTDRVQRPYLDFSSKRWGLITGLRGYLTSAFLTMGLKVVVPVFAVYMTWPALGIDALIAVLPFLVGCAVQRVFEARLERRGSSCWPIVPIVFEVYRLYQVTRAATFVQRLMFMMKDAATTAEITERGVALVGLVVTLQFLAVMCLWSFITFLMRLFPSRPVGENY
Protein: Endoplasmic reticulum vesicle protein 25 (O13946)
Organism: Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Function: Constituent of COPII-coated endoplasmic reticulum-derived transport vesicles. Required for efficient transport of a subset of secretory proteins to the Golgi. Facilitates retrograde transport from the Golgi to the endoplasmic reticulum (By similarity).
Subcellular location: Endoplasmic reticulum membrane {ECO:0000250}; Single-pass type I membrane protein {ECO:0000250}. Golgi apparatus membrane {ECO:0000250}; Single-pass type I membrane protein {ECO:0000250}. Note=Recycles between endoplasmic reticulum and Golgi. {ECO:0000250}.
Interaction partners:
- Endosomal protein P24B
- Uncharacterized membrane protein C16E9.09c
- Uncharacterized membrane protein C17A5.08
- GPI ethanolamine phosphate transferase 2
- GPI inositol-deacylase
- Small ribosomal subunit protein RACK1
- Small ribosomal subunit protein mS45
- Coatomer subunit delta
- Probable coatomer subunit beta'
- Probable coatomer subunit gamma
Sequence:
MMVSLKSSLFFMLALLTVVHALNFDIPAKTNPEPFCLREYVGEKNLVIVNLKTTGNMGDGQTLSMMITDSSGNTHSSIQNVLGEKSVAFDVDASAMLDICFLNTLTPGAIESEHKKRSVKLEFTVGADADDYSSLQKANNLEPVEADIRRARDFIEEIKGKIYYLQAREARFRNTNESTNERVKNFAYLTFISLFVLVIWQILYLRSFFQRKHLIP
Protein: Glutathione S-transferase (Q93694)
Organism: Caenorhabditis elegans
Interaction partners:
- Glutathione S-transferase omega
- Glutathione synthetase
- Glutathione transferase omega-1
- Glutathione S-transferase P 10
- glutathione transferase
- Glutathione S-transferase omega
- Glutathione peroxidase 3
- Glutathione s-transferase kappa 2
- Glutathione peroxidase
- Probable glutathione S-transferase 6
Sequence:
MPQYKLYYFNLRGWAEPARQLFKLAHVEFEDVRIENGTPEWGALKPKTPFGQLPFLSVDGFEIPQSAAILRYLAKKFGYAGKTSEEEAWVDAIVDQFKDFVTPLRQLIMAQRSGNAEEIERIQKEVFAPARDTFFKILNGILEKSKSGFLVGDGVTWADLVIADILTTMEMLGVFDKHGEEQKLAALREKVNEIPEIKEHNSSRPDSVV
Protein: Oligopeptide/dipeptide ABC transporter, permease protein (Q5LSW8)
Organism: Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) (Silicibacter pomeroyi)
Subcellular location: Cell membrane {ECO:0000256|ARBA:ARBA00004651, ECO:0000256|RuleBase:RU363032}; Multi-pass membrane protein {ECO:0000256|ARBA:ARBA00004651, ECO:0000256|RuleBase:RU363032}.
Interaction partners:
- Oligopeptide/dipeptide ABC transporter, permease protein
- Oligopeptide/dipeptide ABC transporter, ATP-binding protein
- Oligopeptide/dipeptide ABC transporter, periplasmic substrate-binding protein
- Peptide/nickel/opine uptake family ABC transporter, permease protein
- Dipeptide ABC transporter, permease protein
- Oligopeptide ABC transporter, permease protein
- Peptide/opine/nickel uptake family ABC transporter, permease protein
- N-acetyltaurine ABC transporter, permease protein
- Peptide/opine/nickel uptake family ABC transporter, permease protein
- Peptide/opine/nickel uptake family ABC transporter, periplasmic substrate-binding protein
Sequence:
MYRIILTRLAQGLLTLLLASIIIFGATEILPGDVAEAILGQSRTDEALAALREEMGLNRPAIVRYFDWLGGMVQGDLGTSLATKRPVADMIESRMWNTLRLALLAAAISVPLSLALGLWSAMRAGGKVDKTLAMTTLALIAVPEFFIGLILMKVFAVELKWFSASANTRPYFDFWQNFRALALPVATLSFAVLAHMMRMTRSSVINIFTSPYMEMAALKGLPKRRLVVLHALPNALSPILTVIALNLSYMVSGVIIVETVFGVPGLTRLLVDGVTLRDIPLIQACAMIFGAVYILLNLLADVLSIMANPRLRYPK
Protein: [acyl-carrier-protein] S-malonyltransferase (EC 2.3.1.39) (Q4KCD1)
Organism: Pseudomonas fluorescens (strain ATCC BAA-477 / NRRL B-23932 / Pf-5)
Interaction partners:
- Polyketide synthase/nonribosomal peptide synthetase hybrid RzxA
- Polyketide synthase RzxE
- Polyketide synthase RzxC
- Polyketide synthase RzxF
- Polyketide synthase RzxD
- Polyketide synthase PltB
- AMP-binding enzyme
- Acyl carrier protein
- 3-oxoacyl-[acyl-carrier-protein] synthase 2
- 3-oxoacyl-[acyl-carrier-protein] synthase 2
Sequence:
MPYLFQGQTSCVVFMFPGQGCQFYQMGRELYQNNAVFQRWMNELDTLIRAELGQSVIAGIYHDNNPRSQVFNDIRLSHPAIFMIEYALGKTLIEHGITPDYLLGASLGELAAAALAGVMTLPEAIRLVVRQGQLFHQHQAPSGEGAMLAILAPQALYQQMPVLHEHCDIAAYNAPSLIVVAGPSSRVAEAERQLNAQDIVFQRLPVNQAFHSRHIDVLKPPVEALFSQIRLQPAQIPVISCLNTQTLQVLDRDHYWQSIRQPIRFSQTLQRIEAEAAERGQSMIYLDLGPSGTLANLIKQNIRDRALPTIHAVLSPFGRDLEKLDEVLTLGRALQPLPAKAEAEAIAVPVPPVVAPEPSPVAAPLQAAAHAVFEVQQPSRLVQRPSAPLASGPKRVYVFPGQGSQRLGMGAELFEQFPEQVAQADRILGYSLKTLCLEDPEQQLSNTRFTQPALYTVSALAFLAKQQADPRKADFLAGHSLGEYCALFAAGAFSFETGLKLVKKRGELMALASGGGMAAVIGRSPEEVNSLLVQHGLGALDVANYNSASQVVLAGPVEALSHAQEIFQALDITFVVLPVSAPFHSRYMHSAMGAFGDYLATFDYSPLHTPVIANINAAPYRDQDLVANLTRQICGSVRWLDTVQYLMRQGTFECEELGPGEVLTKLVKSVQNTAAFS
Protein: LP03039p (Q7K1P7)
Organism: Drosophila melanogaster (Fruit fly)
Subcellular location: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
Interaction partners:
Sequence:
MELAEKSTAAPGGATSSTASSAAGSKSGSGSSAGNGTGANSNNKQATLSRNLWVSGLSTLTRASDLKAIFSKFGKVIGAKVVTNTRTPGTRCYGYVTMSSSADASRCIENLHRTELHGRIISVERTKNEIGGSLNSKEGKGKAPGDAGNKKKEDDSGKKSGSGKGSSSNSGDDKKGGDGNGDSKSVGGDLKRDGKESNRARSRRNDDRGKSLASQDRPRHDRERSAKGSQDHRSGRNPRDVDREIQQRQRERERRQREMLSYQKIREERERQRLRERERELREEERRRREARERQRIEEERLQEERRKLAVERERLEREKAELLRMERERQKLEREKIELERLELKRQQMKYAKKKTKTDRNALHSCQRRGDNTDIPIYLFYTLSESICPCD
Protein: Mediator of RNA polymerase II transcription subunit 15 (Q9Y808)
Organism: Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Function: Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. Component of a med15-hrp1 subcomplex, linking the Mediator complex to the chromatin-remodeling activity of hrp1 at a distinct subset of hrp1-bound gene promoters.
Subcellular location: Nucleus {ECO:0000269|PubMed:16823372}.
Interaction partners:
- Mediator of RNA polymerase II transcription subunit 1
- Mediator of RNA polymerase II transcription subunit 27
- Mediator of RNA polymerase II transcription subunit 20
- Mediator of RNA polymerase II transcription subunit 8
- Mediator of RNA polymerase II transcription subunit 12
- Mediator of RNA polymerase II transcription subunit 18
- Mediator of RNA polymerase II transcription subunit 19
- Mediator of RNA polymerase II transcription subunit 31
- Mediator of RNA polymerase II transcription subunit 7
- Mediator of RNA polymerase II transcription subunit 6
Sequence:
MNRNVDKGWQAQIRPNERQSIALQIAQTLRIISPSISEVQLMNMALSFERQAFDGASSKNEYLTTCGKKTAQLRDQIRDTLQATQMKQMPSVYNNAGNVGALPTAGPNRLANNPRVMPRLQNQNVPMQAGMQQFARNMKLTPQQRQFLLQQSQIQQQRQQQQQQSQQPQQTQQPQASSPTAPNTEANQQRSGSVPGRIVPALTQQQLNNLCNQITALLARNGNPPIPMQKLQSMPPARLISIYQNQIQKFRSLQHMQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQKQAPQNAFFPNPQGNVGAQSLQSMSPQDQPSTQQQQPQRTAAPPNNPNVNATNNNRINIEMLNIPVPKQLFDQIPNLPPNVKIWRDVLELGQSQRLPPEQLKLIGMLYRKHLQIILQHRQQQLNKIQNARMNSQNAPNTNKLGNPQPDNTGNPQAFSQQAFAQQQQQQQQQLHRTSNPTSASVTSQNGQQPINTKLSANAAKTNYQSYLTNKARNATQPTQPPVSQVDYSNNLPPNLDTSSTFRSSASPPSAFTKAGNEALSVPLSGARNTAASRPTNLAAGNSSASIVQQLLECGGTMGQQKMTSRIRELTERVMHSLMRPVPLDLPHDQKVMIASLIKSAYPMFSRTNQLICLFYCLTGNEEATIQLIQMRHIFKLQLEGLQQGVFTCAPQTLAKIKEKTSRYFAFVKAQLLRLHHEVNNNNMSIQNALAHISSLRTASINQQQQPQPQSQQQQQASQFPQAPSVSSNVRPINGSIPNAQPSVPGQAQPAAKANSVGNTSFPVDSKLAFQSLDVSQPDLQAKQKIASQVMKHGLKPEDLKLPPSKKKKIENLSTVQKPKDSVVNTPDVIMSSVDEIPSSVSPGTIAKEEGMAKAREEAIANPLKYAIDAFVAVDHEEEVSAIKSSQTPSSILKTPQSFFIPPSTPDLSFTDNKNSLSPSNILSLDGKFSFNDDSELWADLGNEINSEIGFLKEPDTMNLALDADKDKTKMQNKLTQINFDESCFLDPAIDDKDPWNEMLHEKKVLLKQLQVGNEDEDNIAFPTSTNIWQVVI
Protein: Kinesin-like protein (H3BRB3)
Organism: Homo sapiens (Human)
Subcellular location: Cytoplasm, cytoskeleton {ECO:0000256|ARBA:ARBA00004245}.
Interaction partners:
Sequence:
MAAGGSTQQRRREMAAASAAAISGAGRCRLSKIGATRRPPPARVRVAVRLRPFVDGTAGASDPPCVRGMDSCSLEIANWRNHQETLKYQFDAFYGERSTQQDIYAGSVQPILRHLLEGQNASVLAYGPTGAGKTHTMLGSPEQPGVIPRALMDLLQLTREEGAEGRPWALSVTMSYLEIYQEKVLDLLDPASGDLVIREDCRGNILIPGLSQKPISSFADFERHFLPASRNRTVGATRLNQRSSRSHAVLLVKVDQRERLAPFRQREGKLYLIDLAGSEDNRRTGNKGLRLKESGAINTSLFVLGKVVDALNQGLPRVPYRDSKLTRLLQDSLGGSAHSILIANIAPERRFYLDTVSALNFAARSKEVINRPFTNESLQPHALGPVKLSQKELLGPPEAKRARGPEEEEIGSPEPMAAPASASQKLSPLQKLSSMDPAMLERLLSLDRLLASQGSQGAPLLSTPKRERMVLMKTVEEKDLEIERLKTKQKELEAKMLAQKAEEKENHCPTMLRPLSHRTVTGAKPLKKAVVMPLQLIQEQAASPNAEIHILKNKGRKRKVKVAGGLGYTWSPELESLDALEPEEKAEDCWELQISPELLAHGRQKILDLLNEGSARDLRSLQRIGPKKAQLIVGWRELHGPFSQVEDLERVEGITGKQMESFLKANILGLAAGQRCGAS