wanglab/gogpt-training-data huggingface dataset:
Protein: Nuclear transcription factor Y subunit beta (CAAT box DNA-binding protein subunit B) (Nuclear transcription factor Y subunit B) (NF-YB) (P63139)
Organism: Mus musculus (Mouse)
Function: Component of the sequence-specific heterotrimeric transcription factor (NF-Y) which specifically recognizes a 5'-CCAAT-3' box motif found in the promoters of its target genes. NF-Y can function as both an activator and a repressor, depending on its interacting cofactors.
Subcellular location: Nucleus.
Interaction partners:
- Nuclear transcription factor Y subunit gamma
- Nuclear transcription factor Y subunit alpha
- MHC class II transactivator
- CCAAT/enhancer-binding protein zeta
- Chromatin accessibility complex protein 1
- Speedy protein A
- Cyclic AMP-dependent transcription factor ATF-2
- Inhibitor of growth protein 2
- TATA-box-binding protein
Sequence:
MTMDGDSSTTDASQLGISADYIGGSHYVIQPHDDTEDSMNDHEDTNGSKESFREQDIYLPIANVARIMKNAIPQTGKIAKDAKECVQECVSEFISFITSEASERCHQEKRKTINGEDILFAMSTLGFDSYVEPLKLYLQKFREAMKGEKGIGGAVSATDGLSEELTEEAFTNQLPAGLITADGQQQNVMVYTTSYQQISGVQQIQFS
Protein: Pre-mRNA-splicing factor 38 (Pre-mRNA-processing factor 38) (Q00723)
Organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Function: Required for pre-mRNA splicing and maintenance of stable U6 small nuclear RNA levels. Implicated in the formation of stable and biologically active snRNP structures. As part of the U4/U6.U5 tri-snRNP particle, dispensible for spliceosome assembly, but required for conformational changes, which result in U4 snRNA release and the subsequent catalytic activation of the spliceosome.
Subcellular location: Nucleus {ECO:0000269|PubMed:14562095}.
Interaction partners:
- Pre-mRNA-splicing factor SPP381
- Pre-mRNA-splicing helicase BRR2
- 66 kDa U4/U6.U5 small nuclear ribonucleoprotein component
- Small nuclear ribonucleoprotein Sm D3
- 23 kDa U4/U6.U5 small nuclear ribonucleoprotein component
- U4/U6 small nuclear ribonucleoprotein PRP3
- Small nuclear ribonucleoprotein-associated protein B
- LSM complex subunit LSM2
- U4/U6 small nuclear ribonucleoprotein PRP4
- LSM complex subunit LSM3
Sequence:
MAVNEFQVESNISPKQLNNQSVSLVIPRLTRDKIHNSMYYKVNLSNESLRGNTMVELLKVMIGAFGTIKGQNGHLHMMVLGGIEFKCILMKLIEIRPNFQQLNFLLNVKNENGFDSKYIIALLLVYARLQYYYLNGNNKNDDDENDLIKLFKVQLYKYSQHYFKLKSFPLQVDCFAHSYNEELCIIHIDELVDWLATQDHIWGIPLGKCQWNKIYNSDEESSSSESESNGDSEDDNDTSSES
Protein: 2-amino-5-formylamino-6-ribosylaminopyrimidin-4(3H)-one 5'-monophosphate deformylase (FAPy deformylase) (EC 3.5.1.102) (Formamide hydrolase) (Q57580)
Organism: Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) (Methanococcus jannaschii)
Function: Catalyzes the hydrolysis of the formamide of 2-amino-5-formylamino-6-ribosylamino-4(3H)-pyrimidinone 5'-monophosphate (FAPy) to form 2,5-diamino-6-ribosylamino-4(3H)-pyrimidinone 5'-phosphate (APy).
Interaction partners:
- GTP cyclohydrolase III
- 2,5-diamino-6-ribosylamino-4
- Uncharacterized protein MJ0115
- 6,7-dimethyl-8-ribityllumazine synthase
- Dihydroorotate dehydrogenase B
Sequence:
MQLRLSSGNVLNEKVHKVGIIALGSFLENHGAVLPIDTDIKIASYIALKASILTGAKFLGVVIPSTEYEYVKHGIHNKPEEVYSYMRFLINEGKKIGVEKFLIVNCHGGNILVESFLKDLEYEFDIKVEMINITFTHASTEEVSVGYIIGIAKADEETLKEHNNFEKYPEVGMVGLKEARENNKAIDKEAKVVKRFGVKLDKKLGEKILNNAIEKVVEKIKEMIR
Protein: Lymphocyte antigen 6 complex locus protein G5b (Q8NDX9)
Organism: Homo sapiens (Human)
Subcellular location: Secreted {ECO:0000305}.
Interaction partners:
- Casein kinase II subunit beta
- Lymphocyte antigen 6 complex locus protein G5c
Sequence:
MKVHMLVGVLVMVGFTVGKVPVPDIRTCHFCLVEDPSVGCISGSEKCTISSSSLCMVITIYYDVKVRFIVRGCGQYISYRCQEKRNTYFAEYWYQAQCCQYDYCNSWSSPQLQSSLPEPHDRPLALPLSDSQIQWFYQALNLSLPLPNFHAGTEPDGLDPMVTLSLNLGLSFAELRRMYLFLNSSGLLVLPQAGLLTPHPS
Protein: Ofd1 centriole and centriolar satellite protein (D3ZUD5)
Organism: Rattus norvegicus (Rat)
Interaction partners:
- Serine/threonine-protein kinase PLK1
- C2 domain-containing protein 3
- Pericentriolar material 1
- Nuclear distribution protein nudE homolog 1
- Aurora kinase A
- BBSome complex member BBS4
- Centrosomal protein 290
- Pericentrin
- Centrosomal protein of 164 kDa
- Kinesin-like protein
Sequence:
ITMAQSTMPHKCDDVLSQDELRKKLYQTFKDRGILDTLKTQLRNQLVHELMHPVLSGEVKPPSISVEGSSLLIGASNSLVADHLQRCGYEYSLSVFFPESGLAKEKIFTMQDLLQLIRINPSSSLYKSLISGFDKDNQKGFLMSFLKELAEYHQTKESCDVETQTSTTFPSQVSLAEKFQLIDDQFAEAFPHRPKLESLETKLNEYKKEIQQQLQVEMCQKLKYFREAEITKVRMEEKRKYEKELAEFRNEFERTCQAKNEALISQEKNTLERIKKHQEMETKEIYAQRQLLLNDIDLLRGREAELKERIEAFELTQKLQEEKNKNEAEALRRREQNLKNIEEAYEQKLKTELLKYQLELKDDYITRTNKLLEEERKNKEKTFHLQEELTVINSKKEELSKSVQRMKEVELELESVKAQFFAMSKQNHSLNEKLKEMSDYSQLKEEKVELQAQNKLLKQQLEENRNENLRLLDRITQPPPELLVFQKELQKTEKAMALEHKGFETHRQALQKQLQSEIENSTQLRTQISEYDASVKRLTVQVADLKSQLKQTQTALENEVFRNPKRSLTLHSLTGLLSGKMAPHNEDTSGDFLNVPLEQNKVMAGAVVSRVTPYVNTATEASSPDSDLEFVASSTKAKVKELEQEAERLEKAFRTYYQRVTQNPSMSPQPAKSPSSVYSVGALRSIASSSRDRHVPAEDRVVSEQPLADILKEEKSDVSKAFVGSMVSRPRRTSSSTRLSSTPHPKSRRSLDNEMYLEGLRRLHITSSSPCLDRPSESPAASPTPCPERTPQPSSVPSRHSFSGPSFSSPPEQNASLYQRQTEMQDKSEFSNVDKQSLKDKEKFEPSFRWNKPEQFEAEGLHPAGDMPGIDVAAATLSSRPISYNHPSGAVQSQTGEQKEQQIWELHMKERRQREEQRQNERQEALERERRELEKLEQERRMIEESLKSEIEEELEKSVQEQKDKSAHGENPLEKYMKIIQQRQEQSSADKSSKKSGKECSLVDMMIPSDKDDSSPGFSHEEPDDIW
Protein: Synaptosomal-associated protein 47 (SNAP-47) (Synaptosomal-associated 47 kDa protein) (Q8R570)
Organism: Mus musculus (Mouse)
Function: May play a role in intracellular membrane fusion.
Subcellular location: Endomembrane system {ECO:0000269|PubMed:16621800}. Cytoplasm, perinuclear region {ECO:0000269|PubMed:16621800}. Note=Appears to be exclusively membrane-bound. In primary neurons, widely distributed in both cell bodies and neuronal processes.
Interaction partners:
- Vesicle-associated membrane protein 2
- Syntaxin-3
- Syntaxin-12
- Syntaxin-1A
- Synaptosomal-associated protein 29
- Syntaxin-4
- Synaptosomal-associated protein 25
- Syntaxin-7
- Vesicle-associated membrane protein 7
- Synaptosomal-associated protein 23
Sequence:
MSSDMRVHSWSCSYYLDLEKQWVSGKLTLTPHSLKFIVEKTEEVLVGLPLSSIIEIRKESSLFIFGAITVLEKGQTKHWFSSLQPSRNVVFNVIEHFWRELLLSQPGTAANIPSHVTRGQELIGLMANSQKRMEDTAKDLQQQSEQLDSVLKGLEKMESDLDVADRLLTELETPSWWPFGSKFWKMPAEENLKEGVSSTCEPFGKEGVVITVPAIISERAESHSKLGKLTVLVSALEIYDSCSLLLHRFEKEDVDDIKVHSPYEVSIRQRFIGKPDVAYQLISAKMPEVIPILEVQFSSKIELLEDALVLRNKVFASSAERHAASRPKGCTPHRELPTGGQEGEQLQLQKNLPLFSEGEAQELTQILSKMKGLALDTEAELERQDAALDGITVAVDRATLNVDKQNRRMRKLM
Protein: MICOS complex subunit Mic26 (Apolipoprotein O) (MICOS complex subunit Mic23) (Protein FAM121B) (Q9DCZ4)
Organism: Mus musculus (Mouse)
Function: Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane. Plays a crucial role in crista junction formation and mitochondrial function (By similarity). Can induce cardiac lipotoxicity by enhancing mitochondrial respiration and fatty acid metabolism in cardiac myoblasts. Promotes cholesterol efflux from macrophage cells. Detected in HDL, LDL and VLDL. Secreted by a microsomal triglyceride transfer protein (MTTP)-dependent mechanism, probably as a VLDL-associated protein that is subsequently transferred to HDL (By similarity).
Subcellular location: Mitochondrion inner membrane {ECO:0000250|UniProtKB:Q9BUR5}; Single-pass membrane protein {ECO:0000255}. Mitochondrion {ECO:0000269|PubMed:24743151}. Endoplasmic reticulum membrane {ECO:0000250|UniProtKB:Q9BUR5}. Golgi apparatus membrane {ECO:0000250|UniProtKB:Q9BUR5}. Note=Exists in three distinct forms: a glycosylated and secreted form, an ER/Golgi-resident form and a non-glycosylated mitochondrial form. {ECO:0000250|UniProtKB:Q9BUR5}.
Interaction partners:
- MICOS complex subunit Mic25
- MICOS complex subunit Mic60
- MICOS complex subunit Mic27
- MICOS complex subunit MIC13
- MICOS complex subunit Mic19
- MICOS complex subunit Mic10
- DnaJ homolog subfamily C member 11
- Coiled-coil-helix-coiled-coil-helix domain containing 10
- Metaxin-2
Sequence:
MFKVIQRSVGPASLSLLTFRVYAAPKKDSPHKSYMKIDELSLYSVPEGQSKYVEEPRTQLEENISQLRHHCEPYTSFCQEIYSHTKPKVDHFVQWGVDNYNYLQNAPPGFFPRLGVIGFAGFVGLLFARGSKIKKLVYPPFFMGLGASVYYPQQAITIAQITGEKLYDWGLRGYIVIEDLWKQNFQKPGNVKNSPGNK
Protein: Large ribosomal subunit protein bL35m (39S ribosomal protein L35, mitochondrial) (L35mt) (MRP-L35) (Q8MS27)
Organism: Drosophila melanogaster (Fruit fly)
Subcellular location: Mitochondrion {ECO:0000250}.
Interaction partners:
- Large ribosomal subunit protein uL15m
- Large ribosomal subunit protein mL46
- GM03767p
- 28S ribosomal protein S14
- Large ribosomal subunit protein mL51
- Large ribosomal subunit protein uL13m
- Large ribosomal subunit protein bL20m
- Small ribosomal subunit protein mS25
- Mitochondrial ribosomal protein S11
- Large ribosomal subunit protein bL9m
Sequence:
MLRTFVTSALRSVCRQSPAASSLVPLVQRTQRATLMTLSRPCLLPTPSLASPAHHQLLQLPGVLAATGTPSNTRNVTKFSLVKGKRKTVKAVLKRFKRLDWGAWIRTHSGRQKKLFKKSAALRRRLKQHVFTNATQSWLLDKMVTSYWRRPKHFINDPYKPYHSRNEYYATQSKTFKV
Protein: RRM domain-containing protein (Q38AD4)
Organism: Trypanosoma brucei brucei (strain 927/4 GUTat10.1)
Interaction partners:
Sequence:
MEALRVQGLKFTFGVEFCRLALLRCFGELGSLYDVLLDVDVGEALVTYAESVSAQEAYIKMNGFLLFGETIRVSITVPPVSEVPGCSVTHRPSRFVIIRGATSLWVELNLRHVKGVEQHQIVGANAAVVSFANEHISTKIKRMFDGQIGYNGKPITVLFLRRL
Protein: UDP-glucuronosyltransferase 2A2 (UDPGT 2A2) (EC 2.4.1.17) (P0DTE5)
Organism: Homo sapiens (Human)
Function: UDP-glucuronosyltransferase (UGT) that catalyzes phase II biotransformation reactions in which lipophilic substrates are conjugated with glucuronic acid to increase the metabolite's water solubility, thereby facilitating excretion into either the urine or bile. Essential for the elimination and detoxification of drugs, xenobiotics and endogenous compounds. Catalyzes the glucuronidation of endogenous estrogen hormone estradiol. Contributes to bile acid (BA) detoxification by catalyzing the glucuronidation of BA substrates, which are natural detergents for dietary lipids absorption. Shows a potential role in detoxification of toxic waste compounds in the amniotic fluid before birth, and air-born chemical after birth.
Subcellular location: Endoplasmic reticulum membrane {ECO:0000305|PubMed:19858781}; Multi-pass membrane protein {ECO:0000255}.
Interaction partners:
Sequence:
MVSIRDFTMPKKFVQMLVFNLTLTEVVLSGNVLIWPTDGSHWLNIKIILEELIQRNHNVTVLASSATLFINSNPDSPVNFEVIPVSYKKSNIDSLIEHMIMLWIDHRPTPLTIWAFYKELGKLLDTFFQINIQLCDGVLKNPKLMARLQKGGFDVLVADPVTICGDLVALKLGIPFMYTLRFSPASTVERHCGKIPAPVSYVPAALSELTDQMTFGERIKNTISYSLQDYIFQSYWGEWNSYYSKILGRPTTLCETMGKAEIWLIRTYWDFEFPRPYLPNFEFVGGLHCKPAKPLPKEMEEFIQSSGKNGVVVFSLGSMVKNLTEEKANLIASALAQIPQKVLWRYKGKKPATLGNNTQLFDWIPQNDLLGHPKTKAFITHGGTNGIYEAIYHGVPMVGVPMFADQPDNIAHMKAKGAAVEVNLNTMTSVDLLSALRTVINEPSYKENAMRLSRIHHDQPVKPLDRAVFWIEFVMRHKGAKHLRVAAHDLTWFQYHSLDVIGFLLVCVTTAIFLVIQCCLFSCQKFGKIGKKKKRE
Protein: ATP-dependent RNA helicase ded1 (EC 3.6.4.13) (Multicopy suppressor of overexpressed cyr1 protein 2) (O13370)
Organism: Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Function: ATP-binding RNA helicase involved in translation initiation. Remodels RNA in response to ADP and ATP concentrations by facilitating disruption, but also formation of RNA duplexes (By similarity). Inactivation of ded1 blocks mitotic cell cycle progression at G1 and G2/M. Induces sexual development and ascus formation.
Subcellular location: Cytoplasm {ECO:0000269|PubMed:10759889, ECO:0000269|PubMed:16823372}.
Interaction partners:
- Pre-mRNA-splicing factor cdc5
- Pre-mRNA-splicing factor prp1
- Pre-mRNA-splicing factor cwf10
- Eukaryotic translation initiation factor 4 gamma
- Putative ATP-dependent RNA helicase ste13
- ATP synthase subunit alpha
- ATP synthase subunit beta, mitochondrial
- Polyadenylate-binding protein, cytoplasmic and nuclear
- G2/mitotic-specific cyclin cig2
- ATP synthase subunit gamma, mitochondrial
Sequence:
MSDNVQQQVDSVGSVTEKLQKTNISRPRKYIPPFARDKPSAGAAPAVGDDESVSSRGSSRSQTPSEFSSNYGGRREYNRGGHYGGGEGRQNNYRGGREGGYSNGGGYRNNRGFGQWRDGQHVIGARNTLLERQLFGAVADGTKVSTGINFEKYDDIPVEVSGGDIEPVNEFTSPPLNSHLLQNIKLSGYTQPTPVQKNSIPIVTSGRDLMACAQTGSGKTAGFLFPILSLAFDKGPAAVPVDQDAGMGYRPRKAYPTTLILAPTRELVCQIHEESRKFCYRSWVRPCAVYGGADIRAQIRQIDQGCDLLSATPGRLVDLIDRGRISLANIKFLVLDEADRMLDMGFEPQIRHIVEGADMTSVEERQTLMFSATFPRDIQLLARDFLKDYVFLSVGRVGSTSENITQKVVHVEDSEKRSYLLDILHTLPPEGLTLIFVETKRMADTLTDYLLNSNFPATSIHGDRTQRERERALELFRSGRTSIMVATAVASRGLDIPNVTHVINYDLPTDIDDYVHRIGRTGRAGNTGQAVAFFNRNNKGIAKELIELLQEANQECPSFLIAMARESSFGGNGRGGRYSGRGGRGGNAYGARDFRRPTNSSSGYSSGPSYSGYGGFESRTPHHGNTYNSGSAQSWW
Protein: NAD(P)H-quinone oxidoreductase chain 4, chloroplastic (EC 7.1.1.-) (NAD(P)H dehydrogenase, chain 4) (NADH-plastoquinone oxidoreductase chain 4) (P0C323)
Organism: Oryza sativa (Rice)
Subcellular location: Plastid, chloroplast thylakoid membrane {ECO:0000305}; Multi-pass membrane protein {ECO:0000305}.
Interaction partners:
Sequence:
MSSFPWLTILVVLPIFAGSLIFFLPHRGNKIVRWYTMSICLLEFLLMTYAFCYHFQLEDPLIQLKEDSKWIDVFNFHWRLGIDGLSLGSILLTGFMTTLATLAAWPVTRNSRLFYFLMLAMYSGQIGLFSSRDLLLFFIMWELELIPVYLLLSMWGGKRRLYSATKFILYTAGGSIFFLIGVLGMGLYGSNEPRLDLERLINQSYPATLEILFYFGFLIAYAVKLPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHYLFSPWLVIIGAMQIIYAASTSLGQRNFKKRIAYSSVSHMGFIIIGIGSITNIGLNGAILQILSHGFIGATLFFLAGTACDRMRLVYLEELGGVSIPMPKIFTMFSSFSMASLALPGMSGFVAELVVFFGLITSPKFLLMPKMLITFVMAIGMILTPIYLLSMLRQMFYGYKLFHVPNENFEDSGPRELFLLICIFLPVIGIGIYPDFVLSLSVDRVEALLSNYYPK
Protein: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 (60 kDa BRG-1/Brm-associated factor subunit A) (BRG1-associated factor 60A) (BAF60A) (Protein D15KZ1) (SWI/SNF complex 60 kDa subunit) (Q61466)
Organism: Mus musculus (Mouse)
Function: Involved in transcriptional activation and repression of select genes by chromatin remodeling (alteration of DNA-nucleosome topology). Component of SWI/SNF chromatin remodeling complexes that carry out key enzymatic activities, changing chromatin structure by altering DNA-histone contacts within a nucleosome in an ATP-dependent manner (By similarity). Belongs to the neural progenitors-specific chromatin remodeling complex (npBAF complex) and the neuron-specific chromatin remodeling complex (nBAF complex). During neural development a switch from a stem/progenitor to a postmitotic chromatin remodeling mechanism occurs as neurons exit the cell cycle and become committed to their adult state. The transition from proliferating neural stem/progenitor cells to postmitotic neurons requires a switch in subunit composition of the npBAF and nBAF complexes. As neural progenitors exit mitosis and differentiate into neurons, npBAF complexes which contain ACTL6A/BAF53A and PHF10/BAF45A, are exchanged for homologous alternative ACTL6B/BAF53B and DPF1/BAF45B or DPF3/BAF45C subunits in neuron-specific complexes (nBAF). The npBAF complex is essential for the self-renewal/proliferative capacity of the multipotent neural stem cells. The nBAF complex along with CREST plays a role regulating the activity of genes essential for dendrite growth. Has a strong influence on vitamin D-mediated transcriptional activity from an enhancer vitamin D receptor element (VDRE). May be a link between mammalian SWI-SNF-like chromatin remodeling complexes and the vitamin D receptor (VDR) heterodimer. Mediates critical interactions between nuclear receptors and the BRG1/SMARCA4 chromatin-remodeling complex for transactivation (By similarity).
Subcellular location: Nucleus {ECO:0000305}.
Interaction partners:
- SWI/SNF complex subunit SMARCC2
- SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 4
- SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1
- Actin-like protein 6A
- SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
- AT-rich interactive domain-containing protein 1A
- SWI/SNF complex subunit SMARCC1
- Zinc finger protein ubi-d4
- SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2
- PHD finger protein 10
Sequence:
MAARAGFQSVAPSGGAGASGGAGVAAALGPGGTPGPPVRMGPAPGQGLYRSPMPGAAYPRPGMLPGSRMTPQGPSMGPPGYGGNPSVRPGLAQSGMDQSRKRPAPQQIQQVQQQAVQNRNHNAKKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKRKLRIFISNTFNPAKSDAEDGEGTVASWELRVEGRLLEDAALSKYDATKQKRKFSSFFKSLVIELDKDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVNVRCTVLLMLDYQPPQFKLDPRLARLLGIHTQTRPVIIQALWQYIKTHKLQDPHEREFVLCDKYLQQIFESQRMKFSEIPQRLHALLMPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLSTASQQEIATLDNKIHETIETINQLKTQREFMLSFARDPQGFINDWLQSQCRDLKTMTDVVGNPEEERRAEFYFQPWAQEAVCRYFYSKVQQRRQELEQALGIRNT
Protein: Probable plastid-lipid-associated protein 2, chloroplastic (AtPap2) (Fibrillin-1b) (O49629)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Probably involved in light/cold stress-related jasmonate (JA) biosynthesis.
Subcellular location: Plastid, chloroplast, plastoglobule {ECO:0000269|PubMed:16461379, ECO:0000269|PubMed:22274653}.
Interaction partners:
- Plastid-lipid-associated protein 6, chloroplastic
- Probable starch synthase 4, chloroplastic/amyloplastic
- Probable plastid-lipid-associated protein 13, chloroplastic
- Probable plastid-lipid-associated protein 9, chloroplastic
- Probable plastid-lipid-associated protein 8, chloroplastic
- Small ribosomal subunit protein uS4c
- Ankyrin repeat family protein
- Ankyrin repeat family protein
- Small ribosomal subunit protein eS7y
Sequence:
MATVQLSTQFSCQTRVSISPNSKSISKPPFLVPVTSIIHRPMISTGGIAVSPRRVFKVRATDTGEIGSALLAAEEAIEDVEETERLKRSLVDSLYGTDRGLSASSETRAEIGDLITQLESKNPTPAPTEALFLLNGKWILAYTSFVNLFPLLSRGIVPLIKVDEISQTIDSDNFTVQNSVRFAGPLGTNSISTNAKFEIRSPKRVQIKFEQGVIGTPQLTDSIEIPEYVEVLGQKIDLNPIRGLLTSVQDTASSVARTISSQPPLKFSLPADNAQSWLLTTYLDKDIRISRGDGGSVFVLIKEGSPLLNP
Protein: X-ray repair cross complementing 1 (F5H8D7)
Organism: Homo sapiens (Human)
Subcellular location: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
Interaction partners:
Sequence:
MPEIRLRHVVSCSSQDSLEKEEQIHSVDIGNDGSAFVEVLVGSSAGGAGEQDYEVLLVTSSFMSPSESRSGSNPNRVRMFGPDKLVRAAAEKRWDRVKIVCSQPYSKDSPFGLSFVRFHSPPDKDEAEAPSQKVTVTKLGQFRVKEEDESANSLRPGALFFSRINKTSPVTASDPAGPSYAAATLQASSAASSASPVSRAIGSTSKPQESPKGKRKLDLNQEEKKTPSKPPAQLSPSVPKRPKLPAPTRTPATAPVPARAQGAVTGKPRGEGTEPRRPRAGPEELGKILQGVVVVLSGFQNPFRSELRDKALELGAKYRPDWTRDSTHLICAFANTPKYSQVLGLGGRIVRKEWVLDCHRMRRRLPSQRYLMAGPGSSSEEDEASHSGGSGDEAPKLPQKQPQTKTKPTQAAGPSSPQKPPTPEETKAASPVLQEDIDIEGVQSEGQDNGAEDSGDTEDELRRVAEQKEHRLPPGQEENGEDPYAGSTDENTDSEEHQEPPDLPVPELPDFFQGKHFFLYGEFPGDERRKLIRYVTAFNGELEDYMSDRVQFVITAQEWDPSFEEALMDNPSLAFVRPRWIYSCNEKQKLLPHQLYGVVPQA
Protein: Uncharacterized protein PB16A4.06c (Q96WU9)
Organism: Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Interaction partners:
Sequence:
MQASSEPANVHFEGQNQSSEGQLSTSPPRRWRNCTLQRHGSRASADEFCEQYRSRSHGPQGRRSLEHDNQFFNSRTYYGNGGNTTDTEALQKSVGSQSADEFETLREQTVPNPIAEAWRKYFRKVH
Protein: Mitochondrial inner membrane protease ATP23 homolog (EC 3.4.24.-) (Ku70-binding protein 3) (XRCC6-binding protein 1) (Q9Y6H3)
Organism: Homo sapiens (Human)
Interaction partners:
- X-ray repair cross-complementing protein 6
- Protein artemis
- DNA excision repair protein ERCC-8
- DNA repair protein XRCC4
- X-ray repair cross-complementing protein 5
- DNA excision repair protein ERCC-5
- DNA excision repair protein ERCC-1
- DNA-dependent protein kinase catalytic subunit
- DNA mismatch repair protein Msh2
- DNA repair endonuclease XPF
Sequence:
MAGAPDERRRGPAAGEQLQQQHVSCQVFPERLAQGNPQQGFFSSFFTSNQKCQLRLLKTLETNPYVKLLLDAMKHSGCAVNKDRHFSCEDCNGNVSGGFDASTSQIVLCQNNIHNQAHMNRVVTHELIHAFDHCRAHVDWFTNIRHLACSEVRAANLSGDCSLVNEIFRLHFGLKQHHQTCVRDRATLSILAVRNISKEVAKKAVDEVFESCFNDHEPFGRIPHNKTYARYAHRDFENRDRYYSNI
Protein: Tubulin alpha-1C chain (EC 3.6.5.-) (Alpha-tubulin 6) (Alpha-tubulin isotype M-alpha-6) (Tubulin alpha-6 chain) [Cleaved into: Detyrosinated tubulin alpha-1C chain] (P68373)
Organism: Mus musculus (Mouse)
Function: Tubulin is the major constituent of microtubules, a cylinder consisting of laterally associated linear protofilaments composed of alpha- and beta-tubulin heterodimers. Microtubules grow by the addition of GTP-tubulin dimers to the microtubule end, where a stabilizing cap forms. Below the cap, tubulin dimers are in GDP-bound state, owing to GTPase activity of alpha-tubulin.
Subcellular location: Cytoplasm, cytoskeleton.
Interaction partners:
- Tubulin beta-4A chain
- Tubulin beta-2A chain
- Tubulin beta-6 chain
- Tubulin beta-4B chain
- Tubulin beta-5 chain
- Tubulin beta-2B chain
- Tubulin beta-1 chain
- Tubulin beta-3 chain
- Microtubule-associated protein
- Cell division control protein 42 homolog
Sequence:
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEVGADSAEGDDEGEEY
Protein: Zeste-white 5 (Q9U9D0)
Organism: Drosophila melanogaster (Fruit fly)
Subcellular location: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
Interaction partners:
Sequence:
MNSKIAEVVVLNCRTCTRACKLHKPLQEEIDLGSEGSTTLASMLNYCTGLSFEPQDGAAMPQHICLHCLQLLEQAFNFKRMVIDSDELLRLGLDEARCSSFHESQTHSPNQSQQHDQQQQAFDSTEEYVMIEMLNEEQENVANLDEELAEEDRRIFAMTVDEEEEFLTEEVDQDDELSEEEHQLAQSGDQQEEHITMESVHEFQPAEVEYVTIKNEFETIVTEEDEFEVMNDSGAHDAILDCQMIVIPAEGAIDEVIGEETLEMEGDGREEHLLPEAEDVCEDEDFLEESLDSAPPTAGEALPYVCTVCQKEFRQQCRLNQHMRSHVDEKQYECEECGKRLKHLRNYKEHMLTHTNVKPHQCSICGRFYRTTSSLAVHKRTHAEKKPYNCDQCGRGYAAFDHLRRHKLTHTGERPYACDLCDKAYYDSSSLRQHKISHTGKKAFTCEICGVGLSQKSGYKKHMMVHSGVKAHKCDVCGHAFTFTSNLNAHVRLHSGEKPFKCEVCVKAFPTKKRLASHMRVHNKESPVTATVAVQSINPPSRQAGAEGATGGGATGGSPTGGGATGGSATNLHITEVHEQPVSTSKVVMVL
Protein: Histocompatibility 2, class II, locus Mb2 (B7ZNR4)
Organism: Mus musculus (Mouse)
Subcellular location: Membrane {ECO:0000256|ARBA:ARBA00004479}; Single-pass type I membrane protein {ECO:0000256|ARBA:ARBA00004479}.
Interaction partners:
Sequence:
MAALWLLLLVLSLDCMGAGGFVAHVESTCVLDDAGTPQDFTYCVSFNKDLLACWDPDVGKIVPCEFGVLSRLAEIISNILNEQESLIQRLQNGLQDCATHTQPFWDVLTHRTRAPSVRVAQTTPFNTREPVMLACYVWGFYPADVTITWMKNGQLVPSHSNKEKTAQPNGDWTYQTVSYLALTPSYGDVYTCVVQHSGTSEPIRGDWTPGLSPIQTVKVSVSAATLGLGFIIFCVGFFRWRKSHSSSYTPLPGSTYPEGRH
Protein: Membrane cofactor protein (CD antigen CD46) (Q9Z0M4)
Organism: Rattus norvegicus (Rat)
Function: May be involved in the fusion of the spermatozoa with the oocyte during fertilization.
Subcellular location: Cytoplasmic vesicle, secretory vesicle, acrosome inner membrane {ECO:0000269|PubMed:15215199}; Single-pass membrane protein {ECO:0000269|PubMed:15215199}. Note=Inner acrosomal membrane of spermatozoa.
Interaction partners:
- Complement C4
- Complement C4A.
- Moesin
- CD59 glycoprotein
- Membrane cofactor protein
- Complement C3
- Complement factor I
- T-cell surface glycoprotein CD4
- Complement C4A
- ADAM metallopeptidase domain 3A.
Sequence:
MTAAPLTPDPTHPRRRRKSYTFFSLGIYAEALLFLLSSLSDACEPPPPFEAMELKDKPKPHYAIGEIIEYTCKKGYLYLSPYPMTAICQPNHTWVPISDHGCIKVQCTMLQDPSFGKVHYIDGRFSWGARVKYTCMNGYYMVGMSVLQCELNGNGDAFWNGHPPSCKKVYCLPPPKIKNGTHTFTDIKVFKYHEAVIYSCDPNPGPDKFSLVGPSMLFCAGHNTWSSDPPECKVVKCPFPVLQNGRQISRTEKKFSYQALVLFQCLEGFYMEGSSMVVCGAKSSWEPSIPQCLKGPKPHSTKPPVYSESGYPSPREGIFGQEFDAWIIALIVVTSVVGVIVICLIILRCSEYRKK