wanglab/gogpt-training-data huggingface dataset:
Protein: Aryl hydrocarbon receptor nuclear translocator (Aryl hydrocarbon receptor nuclear translocator type 1a) (Q64FF9)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Subcellular location: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
Interaction partners:
Sequence:
MTSANPDMSEVPSLAMTSSNGSHSNGVQKANKRQATSDYEDDEGGKLFRCDDDGGGSNDKERFARENHSEIERRRRNKMTAYITELSDMVPACSALARKPDKLTILRMAVSHMKSLRGTGNTSTDGTYKPSFLTDQELKHLILEAADGFLFVVSCETGRVVYVSDSVTPVLNQAQSDWLGSSLYDQLHPDDVEKLREQLSTTENNNNSGRMLDMKTGTVKKEGGQATVRMSMGARRSFICRMRCGVCPVEPVSLNRLNFLRTRNRNGLGSAKDGEQQYVVVHCTGYIRSWPPAGMNLSEEEADNNQGNRFCLVAIGRLQVTCCPSDTSINNISVPVEFISRHNSQGVYTFVDHRCTATVGFQTQELLGKNILDFAHPEDQGLLRDSLQQVVKLRGQVMSVMFRFQSKSREWVWMRTSSFTFQNPFSEEIEYIICTNTNVKQLQQQQVELDGGGMSQEAPYENSQVTLPQVSVQTCGVVSADHSKTPLSHICIHSLKTTLIKKS
Protein: Feruloyl esterase B (EC 3.1.1.73) (Cinnamoyl ester hydrolase) (Esterase A) (EstA) (Ferulic acid esterase B) (Q9Y871)
Organism: Piromyces equi
Function: Involved in degradation of plant cell walls. Hydrolyzes of the feruloyl-arabinose ester bond in arabinoxylans as well as the feruloyl-galactose and feruloyl-arabinose ester bonds in pectin.
Subcellular location: Secreted.
Interaction partners:
Sequence:
MKTSIVLSIVALFLTSKASADCWSERLGWPCCSDSNAEVIYVDDDGDWGVENNDWCGIQKEEENNNSWDMGDWNQGGNQGGGMPWGDFGGNQGGGMQWGDFGGNQGGGMPWGDFGGNQGGGMPWGDFGGNQGGNQGGGMPWGDFGGNQGGNQGGGMPWGDFGGNQGGGMQWGDFGGNQGGNQGGGMPWGDFGGNQGGGMQWGDFGGNQGGNQGGGMPWGDFGGNQGGGMQWGDFGGNQGGGMQWGDFGGNQGGNQDWGNQGGNSGPTVEYSTDVDCSGKTLKSNTNLNINGRKVIVKFPSGFTGDKAAPLLINYHPIMGSASQWESGSQTAKAALNDGAIVAFMDGAQGPMGQAWNVGPCCTDADDVQFTRNFIKEITSKACVDPKRIYAAGFSMGGGMSNYAGCQLADVIAAAAPSAFDLAKEIVDGGKCKPARPFPILNFRGTQDNVVMYNGGLSQVVQGKPITFMGAKNNFKEWAKMNGCTGEPKQNTPGNNCEMYENCKGGVKVGLCTINGGGHAEGDGKMGWDFVKQFSLP
Protein: Motility protein A (Chemotaxis protein MotA) (P09348)
Organism: Escherichia coli (strain K12)
Function: MotA and MotB comprise the stator element of the flagellar motor complex. Required for rotation of the flagellar motor. Probable transmembrane proton channel. Overexpression of MotA, with or without MotB, restores motility in a pdeH disruption, (a c-di-GMP phosphodiesterase) suggesting there is an interaction (direct or indirect) between the c-di-GMP-binding flagellar brake protein YcgR and the flagellar stator.
Subcellular location: Cell inner membrane; Multi-pass membrane protein.
Interaction partners:
- Motility protein B
- Chemotaxis protein CheA
- Flagellar transcriptional regulator FlhC
- Flagellar secretion chaperone FliS
- Chemotaxis protein CheW
- Flagellar hook-associated protein 1
- Flagellar M-ring protein
- Methyl-accepting chemotaxis protein II
- Flagellar motor switch protein FliG
- Flagellar L-ring protein
Sequence:
MLILLGYLVVLGTVFGGYLMTGGSLGALYQPAELVIIAGAGIGSFIVGNNGKAIKGTLKALPLLFRRSKYTKAMYMDLLALLYRLMAKSRQMGMFSLERDIENPRESEIFASYPRILADSVMLDFIVDYLRLIISGHMNTFEIEALMDEEIETHESEAEVPANSLALVGDSLPAFGIVAAVMGVVHALGSADRPAAELGALIAHAMVGTFLGILLAYGFISPLATVLRQKSAETSKMMQCVKVTLLSNLNGYAPPIAVEFGRKTLYSSERPSFIELEEHVRAVKNPQQQTTTEEA
Protein: Chemokine subfamily B Cys-X-Cys (Platelet basic protein) (Thymus chemokine 1) (Q9EQI5)
Organism: Mus musculus (Mouse)
Subcellular location: Secreted {ECO:0000256|ARBA:ARBA00004613}.
Interaction partners:
- C-X-C chemokine receptor type 2
- Stromal cell-derived factor 1
- C-X-C chemokine receptor type 1
- C-X-C motif chemokine 10
- C-C motif chemokine 5
- C-X-C motif chemokine 9
- C-C motif chemokine 28
- C-X-C motif chemokine 14
- C-C motif chemokine ligand 26
- C-C chemokine receptor type 2
Sequence:
MGFRLRPTSSCTRACPLHNLQILLLLGLILVALAPLTAGKSDGMDPYIELRCRCTNTISGIPFNSISLVNVYRPGVHCADVEVIATLKNGQKTCLDPNAPGVKRIVMKILEGY
Protein: Talin rod domain-containing protein 1 (Mesoderm development candidate 1) (Q9ERE8)
Organism: Mus musculus (Mouse)
Function: Actin-binding protein which may have an oncogenic function and regulates cell proliferation, migration and invasion in cancer cells.
Interaction partners:
- Vinculin
Sequence:
MASGSAGKPTGEAASPAPGSAVGGASSQPRKRLVSICDHCKGKMQLVADLLLLSSEARPVLFEGPASPGAGAESFEQCRDTIIARTKGLSILTHDVQSQLNMGRFGEAGDSLVELGDLVVSLTECSAHAAYLAAVATPGAQPAQPGLVDRYRVTRCRHEVEQGCAVLRATPLADMTPQLLLEVSQGLSRNLKFLTDACALASDKSRDRFSREQFKLGVKCMSTSASALLACVREVKAAPSELARSRCALFSGPLVQAVSALVGFATEPQFLGRAAAVSTEGKAVQTAILGGAMSVVSACVLLTQCLRDLAQHPDGSAKMSDHRERLRNSACAVSEGCTLLSQALRERSSPRTLPPVNSNSVN
Protein: Peptidase S8 and S53 domain-containing protein (Q54TD0)
Organism: Dictyostelium discoideum (Social amoeba)
Interaction partners:
Sequence:
MISKTSLLLLLLSIVALASAISVQRVPIADVTSAPAHFVQNKLAKSYELVQFKILLKQRNLDILEEKFWDVSSPKSENYGKFLSKEEIDSIVAPSPKDVKVVVNWLIDNGLSKNEMIVHSDFIQVRTNVGKASTLFETSFAHYSSSRTALKRIRVVGQASMPMHVLAKVDLVLGLSDFIEDNKMSESMRATKKQVQGSTVSITPAVIKQYYGIPTGQIGVESENFQSIAAFSDFYSSGALQFFDQKFGIDSSTVRVKNVGQNCIAQNCDQMESDLDVQYMTAIGNNITTLFLSSGNGEWIIDWATAIQQYNPIPKIASISYGWAEVEQCEITNSCSTLGIDSVVYVARSNVELQKVGLRGVSVFVSSGDDGAPSFGAASGNCPIDGTKQYCPLGGCNHKSSQCPMITIMESNGTQCFFPMGSESNTCQSMLQNQNIVNGINEFVSSNSKCQVALEQDTQQNYHIYSSCTCDKLKPYSDSDAGFKIVGYSYDQDAGTLFQPDYPASSPFITSVGATQITDVTKPEIVCSVATGAIITGGGGVAITQAQPSYQADAVATYIKSGTLPPSYSYNATNRFYPDLTLVGHAYEIAVPNTLTSNTCPCALESVDGTSCSSPTLAGMISLINDKLIGAGKPTLGFLNPLLYQAAKEQPNVFNDITTGANNCNRAYCCQYGYTATTGYDAASGLGSINFKNFEQYVLSLN
Protein: Ubiquitin carboxyl-terminal hydrolase 36 (EC 2.3.2.-) (EC 3.4.19.12) (Deubiquitinating enzyme 36) (Ubiquitin thioesterase 36) (Ubiquitin-specific-processing protease 36) (B1AQJ2)
Organism: Mus musculus (Mouse)
Function: Deubiquitinase essential for the regulation of nucleolar structure and function. Required for cell and organism viability. Plays an important role in ribosomal RNA processing and protein synthesis, which is mediated, at least in part, through deubiquitination of DHX33, NPM1 and FBL, regulating their protein stability. Functions as a transcriptional repressor by deubiquiting histone H2B at the promoters of genes critical for cellular differentiation, such as CDKN1A, thereby preventing histone H3 'Lys-4' trimethylation (H3K4). Specifically deubiquitinates MYC in the nucleolus, leading to prevent MYC degradation by the proteasome: acts by specifically interacting with isoform 3 of FBXW7 (FBW7gamma) in the nucleolus and counteracting ubiquitination of MYC by the SCF(FBW7) complex. In contrast, it does not interact with isoform 1 of FBXW7 (FBW7alpha) in the nucleoplasm. Interacts to and regulates the actions of E3 ubiquitin-protein ligase NEDD4L over substrates such as NTRK1, KCNQ2 and KCNQ3, affecting their expression an functions. Deubiquitinates SOD2, regulates SOD2 protein stability. Deubiquitinase activity is required to control selective autophagy activation by ubiquitinated proteins (By similarity).
Subcellular location: Nucleus, nucleolus {ECO:0000250|UniProtKB:Q9P275}. Cytoplasm {ECO:0000250|UniProtKB:Q9P275}.
Interaction partners:
Sequence:
MPIVDKLKEALKPGRKDSAEDGDLGRLLAASAKKVLLQRIEFEPASKSFSYQLESLKSKYVLLSARAEGASRHRSGDELQARKPGTERVSGSGGDGVPAPQKVLFPVERLSLRWERVFRVGAGLHNLGNTCFLNSTIQCLTYTPPLANYLLSKEHARSCHQGGFCMLCLMQNHMVQAFANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGYAKLDRQTQATTLVHQIFGGYLRSRVKCSVCKSVSDTYDPYLDIALEIRQAANIVRALELFVKSDVLSGENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRFANFSGGKITKDVGYPEFLNIRPYMSQSSGDPVMYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNVKVVLNQQAYVLFYLRIPGSKKSPEGPVSRVGATLPSRPKVVPEHSKKSPGNGVVPSPLMAKRQDSVMMRKLPAPEEVGVPVSRNGSLPGLKLQNGCAPAKTPAGSPSPRLTPTPTHMPTILDEPGKKVKKSAPLQSLTTSPTTSQGSPGTGESRSQRPGSWASRDTIFSTSPKLLARAITNGHRLKGEGSGVDLEKGDSSSSSPEHSASSDPAKAPQTAESRAAHACDSQGTNCPTAGHPKALLNGVDAKMVKLKSPALSSTTTEPTSLMSPPPAKKLALSAKKASTLRRATGNDIGSPSPSAFCDLTSPMKATHPVVASTGPVSKTRTAAPAPRPSTHPHSASLSSSSAKPLGTSEPQSCRPSAWTPLPQVNGHFTSHLHQLPEASEALHSPSKKRKKTPNGDPQRLGIDTLLPQCLRGAPAAARRKRKKRCSEGEGATAPKQEGQFQDQSWSSGSQKEEGTQPQVNGHQVSHILDSYHVSSRKRRKRKRSEGLSQEATPSQDLIQHSCSPVDHSEPEARTELQKKKKKKRRKRKPEPQQDEESKHPGDQRSPRPSVTPVPALSVNGHLPSDCLGLGQAPLVTWNRDQEPDVVQALLQDSSDKAYGKKVLTWDGEPSAISQDAIKDSRLARTQTVVDDWDEEFDRGKEKKIKKFKREKKRNFNAFQKLQSRRNFWSVTHPAKVASLSYRR
Protein: At4g37190 (Plasma membrane, autoregulation-binding site, misato segment II, myosin-like, tubulin/FtsZ protein) (Tubulin-like protein) (O23167)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Subcellular location: Cytoplasm, cytoskeleton {ECO:0000256|ARBA:ARBA00004245}. Mitochondrion {ECO:0000256|ARBA:ARBA00004173}.
Interaction partners:
- Gamma-tubulin complex component
- Gamma-tubulin complex component
- Cell division protein FtsZ homolog 1, chloroplastic
- Kinase with adenine nucleotide alpha hydrolases-like domain-containing protein
- Protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3
- G-box-binding factor 2
Sequence:
MREIVTIQVGEFANFVGSHFWNFQDELLGLASDPESDPIFRNHNLDMDVLYRSGETQQGVATYTPRLVSVNLKGALGTMSSRGTLYNEGSSSRSDSSATWFGDVDTQRSEPRKRNLFLQSLYEEEHVVGKEKAKEIEDKDIVGCLDEEVECWTDFSKSHYHPQSLYELNGLWMDSQAFNNYGIGKDVFSEASRGEEICDRLRFFVEECDHIQGIKFLVDDSGGFSAVAADFLENMADEYTNVPVLLYSVRTPMSQMSSKKTVSNKLHDAISFSRLSSFCKLFTPIGLPSLTGSKASKFLNLGDEKPYRSSAVYAAALHSSTIPFRMQPTSSDSSEVSNSMDVNTLVQLLTGRGRQNIVAILDSAMPAPTLAGKQLENTLLTSLQALTPEVTEDVEDNQAVESMCILGALRSEDKEALVSEVKNAVDASYEQATTKGKPLFCNLSVSRCPLPVPLPFPSIFGNLVGRKGEILSSPVSDSLYRGSLDVHSIPVATRWRSSSAILPFLETRMGNLEKLGIQWGAMGSDVVRAWGFGREELQEMRENLSKMVSELNPQFFESSDSD
Protein: tRNA (Ile)-lysidine synthase (F4JCQ8)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Interaction partners:
Sequence:
MQVEIPSPYDHGSRRQRRIRRTEETQKQKKMVAISMYRGNLHKVPDVPRRWIMPDRNLSFKDFKSLLHRRKKALSRLPLNPNLNLSVKTELVTDQENPILPSEANGSSGKQKLFEVKREEICGNRVKGDENNDRGFEGARSDGGDRPGRVTESKETDNVPHKYAAKEEETNEAAEKVPSETELKRKEVEERLQVLNAKKHNLVQVLKQILNAEEELKRRSYMQQQGTTVATRPSLPLHVDVSNDSGGNVGTHMEGGETDDAANHNNAQTRTLLRLCGASSSSESPLRRAAALSQHNMVPHTSRWSPLVGPSQPGPAVTVSASGTNYIASSPSPAGFGGTSVFRESRLQSPWN
Protein: Carbonic anhydrase (EC 4.2.1.1) (F7FL00)
Organism: Rattus norvegicus (Rat)
Interaction partners:
- Hypoxia-inducible factor 1-alpha
- Monocarboxylate transporter 4
Sequence:
MHVQPVHTVSWDTPVSCMASLGLSPWVPLLTPAPTVQLLLLLLLLVSAHPQSLSGMQGVPSLGESSSGEDDLGVEDLPSEEDTPGEADPPGGEDPPEVNSKARKEDSLALEDLPTPEAPENRQGSHRDEKGGGHSLWSYGGTLLWPQVSPACAGRFQSPVDIRLELTSFCRTLQPLELLGYELQSLPELSLCNNGHTVQLTLPPGLKMVLGPGQEYRALQLHLHWGTSDHPGSEHTVNGHRFPAEIHVVHLSTAFSELHEALGRPGGLAVLAAFLQESPEENSAYEQLLSHLEEIAEEGSKIEIPGLDVSALLPSDLSRYYRYEGSLTTPPCSQGVIWTVFNETVKLSAKQLHTLSVSLWGLRDSRLQLNFRATQPLNGRTIEASFPAVADSSPEPVHVNSCLSAGDILALVFGLLFAATSIAFLLQLRRQHRHRSGTKDGVTYSPAEMTETGA
Protein: Ferredoxin (Q55980)
Organism: Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
Interaction partners:
- Ferredoxin
- Ycf35
- Ferredoxin
- Ferredoxin
- Ferredoxin
- Ssl1263 protein
- Bifunctional arginine dihydrolase/ornithine cyclodeaminase ArgZ
- Ycf49-like protein
- Sll0609 protein
- Ycf53-like protein
Sequence:
MVIADLNFPPDHRSGLEPELGGDWRNFDDRSGLEPELGGELRERGVYVDEVTCIGCKNCAHVAPNTFTIEQEHGRSRAFSQNGDDEAVIQEAIDTCPVDCIHWVPYDELKHLEEKRKHQQIRPLGYPQINPHL
Protein: SKP1-like protein 1B (SKP1-like 2) (UFO-binding protein 2) (Q9FHW7)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Involved in ubiquitination and subsequent proteasomal degradation of target proteins. Together with CUL1, RBX1 and a F-box protein, it forms a SCF E3 ubiquitin ligase complex. The functional specificity of this complex depends on the type of F-box protein. In the SCF complex, it serves as an adapter that links the F-box protein to CUL1. SCF(UFO) is required for vegetative and floral organ development as well as for male gametogenesis. SCF(TIR1) is involved in auxin signaling pathway. SCF(COI1) regulates responses to jasmonates. SCF(EID1) and SCF(AFR) are implicated in phytochrome A light signaling. SCF(ADO1), SCF(ADO2), SCF(ADO3) are related to the circadian clock. SCF(ORE9) seems to be involved in senescence. SCF(EBF1/EBF2) may regulate ethylene signaling. Plays a role during embryogenesis and early postembryonic development, especially during cell elongation and division. Contributes to the correct chromosome segregation during tetrad formation.
Subcellular location: Nucleus {ECO:0000250}.
Interaction partners:
- Cullin-like protein 3
- Cullin-1
- Cullin-2
- RING-box protein 1a
- Putative cullin-like protein 2
- Putative cullin-like protein 1
- RING-box protein 1b
- Protein TRANSPORT INHIBITOR RESPONSE 1
- F-box protein 7
- Coronatine-insensitive protein 1
Sequence:
MSTVRKITLKSSDGENFEIDEAVALESQTIKHMIEDDCTDNGIPLPNVTSKILSKVIEYCKRHVEAAEKSETTADAAAATTTTTVASGSSDEDLKTWDSEFIKVDQGTLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE
Protein: Calmodulin-binding protein 60 B (GhCBP60B) (A0A1U8IPT1)
Organism: Gossypium hirsutum (Upland cotton) (Gossypium mexicanum)
Function: Transcription activator that binds DNA in a sequence-specific manner, likely 5'-GAAATTTTGG-3', to promote the expression of target genes (By similarity). Required for pathogen resistance.
Subcellular location: Nucleus {ECO:0000269|PubMed:29757140}.
Interaction partners:
- Proliferating cell nuclear antigen
- Proliferating cell nuclear antigen
- Telomerase reverse transcriptase
- DNA helicase
- DNA helicase
- Protein timeless homolog isoform X1
Sequence:
MMLPTKRPAPDHGDDERNEVMVPEPKRRTNLKKNIMGVGGLSFNKIVLNLEPMLRIWVHEAVEAAIRSSIHPSSRPSLNRIEASRGRRLQLRFVDKPPSTIFTGSKVEAENGNPIRIILVDATSQAMVSSGSLSSIKVEIVVLNGEFGTDERQDWTENEFNASVLREREGRRPLVTGDLNITLVDGVGTVDNVIFTDNSSWIRCRKFRLGARIVQRSAGEVTIREATSDAFMVKDHRGELYKKHYPPLLHDEVWRLERIAKDGAFHKRLAYKNVHTVKDFLRLLVTDPIALRNILGGGISNRVWETIIEHALSCVPDDDEWYTYHGTAQRVELLLNSIYNVVKVTFDGQDYLPVENLTFSQKLLVEDAKRQAYKNVWNLTPFDRRAIMGPSMPFTDLLPEPVGTSNLLLQQHDFSGTRPDMPLGLNQSSTSFSYEVENPKPLQGIEPLNPMLRNSSFRMEGIFPYNADNSFSFFADDGFGTNQDNTQAQMLSLTSATPAWAQGSGFIFTPDYETSSISFLSSFPSCNVNDRSIGETREVCPKNRWLKVRAVIQWKSISRGAAKRRRQHWLQHGICT
Protein: Nautilin-63 (N63) (P86702)
Organism: Nautilus macromphalus (Bellybutton nautilus)
Function: Involved in nacre formation. Affects morphology of calcite crystals in vitro but does not inhibit their formation. Binds chitin.
Subcellular location: Secreted {ECO:0000269|PubMed:21585656}.
Interaction partners:
Sequence:
IPDLASSRSTLPVLTKGPTGLLGPRGPYGPLQRFNIELSARGPAAVVGVLGKSFDSWLTKLGLPGPQGRPGPPGPGCRFALSNQCIKLAVEFAGQSKFSSFLANEGKKEGPEGEEGPRTEFDGAYFAGGKFPVVGKPFPQLKVFHAEPPFPTSRSTYGPSGSQPGKKGVVTPFKGNQPLKFNDFLVESDSRCPPDDSSFERSPAVSGHSSPATLNSRMKPAGFPGKGNGAPLKNGIASDPLENLKNRLGSCFPDVLDEPPTSPFFTGPSGYTSDGLNKTPTVSKTLTAAGDPGPGAGKVLESSKTDLVALQGEFQR
Protein: Transforming acidic coiled-coil containing protein 1 (R4GMT7)
Organism: Homo sapiens (Human)
Interaction partners:
Sequence:
MFTLPSTLRSNAKTNHQSSDSEGNFETPEAETPIRSPFKESCDPSLGLAGPGAKSQESQEADEQLVAEVVEKCSSKTCSKPSENEVPQQAIDSHSVKNFREEPEHDFSKISIVRPFSIETKDSTDISAVLGTKAAHGCVTAVSGKALPSSPPDALQDEAMTEGSMGVTLEASAEADLKAGNSCPELVPSRRSKLRKPKPVPLRKKAIGGEFSDTNAAVEGTPLPKASYHFSPEELDENTSPLLGDARFQKSPPDLKETPGTLSSDTNDSGVELGEESRSSPLKLEFDFTEDTGNIEARKALPRKLGRKLGSTLTPKIQKDGISKSAGLEQPTDPVARDGPLSQTSSKPDPSQWESPSFNPFGSHSVLQNSPPLSSEGSYHFDPDNFDESMDPFKPTTTLTSSDFCSPTGNHVNEILESPKKAKSRLITSGCKVKKHETQSLALDACSRDEGAVISQISDISNRDGHATDEEKLASTSCGQKSAGAEVKGIEKETCQKMEEDGSTVLGLLESSAEKAPVSVSCGGESPLDGICLSESDKTAVLTLIREEIITKEIEANEWKKKYEETRQEVLEMRKESYEP
Protein: Calpain-3 (EC 3.4.22.54) (Calcium-activated neutral proteinase 3) (CANP 3) (Calpain L3) (Calpain p94) (Muscle-specific calcium-activated neutral protease 3) (P16259)
Organism: Rattus norvegicus (Rat)
Function: Calcium-regulated non-lysosomal thiol-protease. Proteolytically cleaves CTBP1 at 'His-399'. Mediates, with UTP25, the proteasome-independent degradation of p53/TP53.
Subcellular location: Cytoplasm {ECO:0000250|UniProtKB:P20807}. Nucleus, nucleolus {ECO:0000250|UniProtKB:P20807}.
Interaction partners:
- Titin
- Dysferlin
- Calpastatin
- Caveolin-3
- Nebulin
- Myopalladin
- Uncharacterized protein.
Sequence:
MPTVISPTVAPRTGAEPRSPGPVPHPAQGKTTEAGGGHPGGIYSAIISRNFPIIGVKEKTFEQLHKKCLEKKVLYLDPEFPPDETSLFYSQKFPIQFVWKRPPEICENPRFIIGGANRTDICQGDLGDCWLLAAIACLTLNERLLFRVIPHDQSFTENYAGIFHFQFWRYGDWVDVVIDDCLPTYNNQLVFTKSNHRNEFWSALLEKAYAKLHGSYEALKGGNTTEAMEDFTGGVTEFFEIKDAPSDMYKIMRKAIERGSLMGCSIDDGTNMTYGTSPSGLNMGELIARMVRNMDNSLLRDSDLDPRASDDRPSRTIVPVQYETRMACGLVKGHAYSVTGLEEALFKGEKVKLVRLRNPWGQVEWNGSWSDGWKDWSFVDKDEKARLQHQVTEDGEFWMSYDDFVYHFTKLEICNLTADALESDKLQTWTVSVNEGRWVRGCSAGGCRNFPDTFWTNPQYRLKLLEEDDDPDDSEVICSFLVALMQKNRRKDRKLGANLFTIGFAIYEVPKEMHGNKQHLQKDFFLYNASKARSKTYINMREVSQRFRLPPSEYVIVPSTYEPHQEGEFILRVFSEKRNLSEEAENTISVDRPVKKKKNKPIIFVSDRANSNKELGVDQEAEEGKDKTGPDKQGESPQPRPGHTDQESEEQQQFRNIFRQIAGDDMEICADELKNVLNTVVNKHKDLKTQGFTLESCRSMIALMDTDGSGRLNLQEFHHLWKKIKAWQKIFKHYDTDHSGTINSYEMRNAVNDAGFHLNSQLYDIITMRYADKHMNIDFDSFICCFVRLEGMFRAFHAFDKDGDGIIKLNVLEWLQLTMYA
Protein: Transcription factor MYB101 (Myb-related protein 101) (AtM1) (AtMYB101) (Protein ABNORMAL SHOOT 7) (O80883)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Transcription activator. Binds to 5'-CAACTGTC-3' and/or 5'-TAACAAA-3' motif in target gene promoter (e.g. alpha-amylase) to promote their expression. Positive regulator of abscisic acid (ABA) responses leading to growth arrest during seed germination. Promotes the expression of aleurone-related genes (e.g. CP1, CP, GASA1, BXL1 and BXL2) in seeds. Together with MYB33 and MYB65, promotes the programmed cell death (PCD) leading to vacuolation of protein storage vacuoles (PSVs) in the aleurone layers during seed germination. Maybe involved in the regulation of leaves lamina morphogenesis. Involved in pollen grain development. Together with MYB97 and MYB120, functions as a male factor that controls pollen tube-synergid interaction in fertilization. Required for pollen tube growth arrest and sperm cell release in the female gametophyte, probably via the regulation of pollen tube-specific gene expression.
Subcellular location: Nucleus {ECO:0000255|PROSITE-ProRule:PRU00625, ECO:0000269|PubMed:23791732, ECO:0000269|PubMed:24278028, ECO:0000269|PubMed:25268707}. Note=Detected in the vegetative nucleus of mature pollen grains and pollen tubes. {ECO:0000269|PubMed:23791732}.
Interaction partners:
- Gb|AAF16529.1
- Auxin response factor 10
- F-box associated ubiquitination effector family protein
Sequence:
MDGGGETTATATMEGRGLKKGPWTTTEDAILTEYVRKHGEGNWNAVQKNSGLLRCGKSCRLRWANHLRPNLKKGSFTPDEEKIIIDLHAKLGNKWARMASQLPGRTDNEIKNYWNTRMKRRQRAGLPLYPHEIQHQGIDIDDEFEFDLTSFQFQNQDLDHNHQNMIQYTNSSNTSSSSSSFSSSSSQPSKRLRPDPLVSTNPGLNPIPDSSMDFQMFSLYNNSLENDNNQFGFSVPLSSSSSSNEVCNPNHILEYISENSDTRNTNKKDIDAMSYSSLLMGDLEIRSSSFPLGLDNSVLELPSNQRPTHSFSSSPIIDNGVHLEPPSGNSGLLDALLEESQALSRGGLFKDVRVSSSDLCEVQDKRVKMDFENLLIDHLNSSNHSSLGANPNIHNKYNEPTMVKVTVDDDDELLTSLLNNFPSTTTPLPDWYRVTEMQNEASYLAPPSGILMGNHQGNGRVEPPTVPPSSSVDPMASLGSCYWSNMPSIC
Protein: AATF leucine zipper-containing domain-containing protein (Q4GZ49)
Organism: Trypanosoma brucei brucei (strain 927/4 GUTat10.1)
Interaction partners:
- 40S ribosomal protein S13, putative
- U3 small nucleolar ribonucleoprotein protein IMP3, putative
- U3 small nucleolar RNA-associated protein 6 N-terminal domain-containing protein
- KRR1 small subunit processome component
- PIN domain-containing protein
- U3 small nuclear ribonucleoprotein
- Bms1-type G domain-containing protein
- BING4 C-terminal domain-containing protein
- NUC153 domain-containing protein
- Uncharacterized protein
Sequence:
MSTRSGKQASMCGKKRLKSVSDIINEQFSGNGAERNDMDAWDELGGDKPQIDDYYEGNDSGNEGADDFDGMPPLSTTKRRRTEHKLPQRKEEKRLRRRGPLDPSLSAGDYAATPVDVEAAMDGIFGALEMGEDDEEDISGEGDAKGSKRGGGRKYETEEQYVKWLEAQQAKKLSKRPDSGLTEEDDILQQLESLRSAQVELLHKQESGDTSNPQAREREQVQKAIHHYVMVYSQLLRMRIKLQPVVARAVTFPQYYALKDFLQNGDETIKKETKVVTGSLKELLGTFLSLAAGGKKGEDNGKPTTRGTVPSFKEVNVIHKRFIAGADACIEHWGAKFVQSNSAKLHTVSQPLIQQIRTILSSRAPLRARVQKNRAHVTILGHPEHYRATQSGEHKAARALHIADGDIDGEIYDDGEFLREVVRRGGAVKLQQQLQEIQRELQSSEEPAKRGFHRLTKGKAVNYEPRPKLVGFLLPVPFAVNGQHEVLFKSLFQ
Protein: CDK5 regulatory subunit associated protein 3 (J3QRM1)
Organism: Homo sapiens (Human)
Interaction partners:
Sequence:
XDFGVEAVSEGTDSGISAEAAGIDWGIFPESDSKDPGGDGIDWGDDAVALQITVLEAGTQAPEGVARGPDALTLLEYTETRNQFLDELMELEIFLAQRAVELSEEADVLSVSQFQLAPAILQGQTKEKMVTMVSVLEDLIGKLTSLQLQHLFMILASPRYVDRVTEFLQQKLKQSQLLALKKELMVQKQQEALEEQAALEPKLDLLLEKTKELQKLIEADISKRQKTRLTGRWKATGRKRHLMVILALSMFSTRSCGDWPCGLSGENHRFSF
Protein: Pyruvate dehydrogenase E1 component subunit alpha (EC 1.2.4.1) (F9UQ93)
Organism: Lactiplantibacillus plantarum (strain ATCC BAA-793 / NCIMB 8826 / WCFS1) (Lactobacillus plantarum)
Interaction partners:
- Dihydrolipoyl dehydrogenase
- Pyruvate dehydrogenase complex, E1 component,beta subunit
- Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex
- Formate acetyltransferase
- Malic enzyme, NAD-dependent
- Pyruvate kinase
- Pyruvate oxidase
- L-lactate dehydrogenase 2
- Phosphoenolpyruvate synthase
- L-lactate dehydrogenase 1
Sequence:
MDNEKPIVDFGAIRDVLGKDFEPVQVLDGQAKVIKPEIVSKYSNEQLVEFFKLMLWERTLHQRSNALTRQGRLGFYAPTEGQEASEMGSNAAMKKTDVLMPAYRDIPQLIQHGLPVYKAFLWSRGHVLGNEYPEDFHAMPPQIIIGAQYVQAAGVALGIKKNGTEDKVAYTYTGDGGTSQGDFYEGMNFAGAFEAPAVFIVQNNGYAISVPRRKQTAAKTLAQKAVAAGIPSVQVDGMDFLAVYEVTKAAREYAAAGNGPVMIETLTYRFGPHTNAGDDPKRYRTKDEEQPWFDNDPLIRYRKYLTDQGVWSEDQENEYVEQVKEDIKAAVKQADEAPKQKMTEFLGNVFEEQPQNIQQQITEFQAKESK
Protein: C-C motif chemokine 28 (Small-inducible cytokine A28) (Q9JIL2)
Organism: Mus musculus (Mouse)
Function: Chemotactic for resting CD4, CD8 T-cells and eosinophils (By similarity). Binds to CCR10 and induces calcium mobilization in a dose-dependent manner.
Subcellular location: Secreted {ECO:0000250}.
Interaction partners:
- C-C motif chemokine ligand 26
- C-C motif chemokine 5
- C-C chemokine receptor type 10
- Cholecystokinin
- Stromal cell-derived factor 1
- C-X-C motif chemokine 9
- C-X-C motif chemokine 10
- Chemokine subfamily B Cys-X-Cys
- Eotaxin
- C-X-C motif chemokine 17
Sequence:
MQQAGLTLMAVAVCVAFQTSEAILPMASSCCTEVSHHVSGRLLERVSSCSIQRADGDCDLAAVILHVKRRRICISPHNRTLKQWMRASEVKKNGRENVCSGKKQPSRKDRKGHTTRKHRTRGTHRHEASR
Protein: ATP-dependent helicase fft3 (EC 3.6.4.12) (Fun thirty-related protein 3) (O42861)
Organism: Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Function: DNA helicase that possesses intrinsic ATP-dependent nucleosome-remodeling activity and is required for heterochromatin organization. Required for maintaining a heterochromatin chromatin structure at centromeres and subtelomeres by protecting these regions from euchromatin assembly. Enhances the nucleotide exchange activity of the pim1 guanine nucleotide exchange factor and abolishes histone-H3-mediated RanGAP inhibition. Involved in the construction of the centromeres.
Subcellular location: Nucleus. Chromosome.
Interaction partners:
- Meiotically up-regulated gene 61 protein
- GTP-binding nuclear protein spi1
- Bouquet formation protein 4
- Histone H3.1/H3.2
- Histone deacetylase clr3
Sequence:
MDGKRKIEHTADGTHYDATSNVKRKPIFPPFIADSLSEATEKANVMGGGMNSRLQILSEMSKRVQATAPISSLEHFKQLSDISPSFTSSANSINQPYNYSGSLENLVPTPSAGTPSQFMDAQNPYGAVYNALSQFSETEPKMPSYMDDEEASDSLPLSLSSQSLSSQVTNQKPAPHRLTMRERYAANNLTNGLQFTLPLSSRKTYEPEADDDSNDDMYSDDDSNADRWASRIDTAALKEEVLKYMNRCSTQDLADMTGCTLAEAEFMVAKRPFPDLESALVVKQPRPVIPKGRRGRREKTPLGPRLVGICMEIMRGYFVVDALIRQCEQLGGKIQRGIEAWGLSNTATSDEGETSLVNFDQMKSFGTPANSSFITTPPASFSPDIKLQDYQIIGINWLYLLYELKLAGILADEMGLGKTCQTIAFFSLLMDKNINGPHLVIAPASTMENWLREFAKFCPKLKIELYYGSQVEREEIRERINSNKDSYNVMLTTYRLAATSKADRLFLRNQKFNVCVYDEGHYLKNRASERYRHLMSIPADFRVLLTGTPLQNNLKELISLLAFILPHVFDYGLKSLDVIFTMKKSPESDFERALLSEQRVSRAKMMMAPFVLRRKKSQVLDALPKKTRIIEFCEFSEEERRRYDDFASKQSVNSLLDENVMKTNLDTNANLAKKKSTAGFVLVQLRKLADHPMLFRIHYKDDILRQMAKAIMNEPQYKKANELYIFEDMQYMSDIELHNLCCKFPSINSFQLKDEPWMDATKVRKLKKLLTNAVENGDRVVLFSQFTQVLDILQLVMKSLNLKFLRFDGSTQVDFRQDLIDQFYADESINVFLLSTKAGGFGINLACANMVILYDVSFNPFDDLQAEDRAHRVGQKKEVTVYKFVVKDTIEEHIQRLANAKIALDATLSGNAETVEAEDDDD
Protein: Transcriptional corepressor (Eurofung) (C8V0I4)
Organism: Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) (Aspergillus nidulans)
Interaction partners:
- Cell-cycle checkpoint serine-threonine kinase
Sequence:
MRSIDQPLLTRLPSSGRAQTSQLPLTMYNAHRGMVPAPNSRLNELLDQLRQEFENQSRSTGEFEHQLTGQLQEMEMIRQKVYQLEQAQLKMKQDYEAEIRMLRHELESRGVQPVASHVAVPAQHGGPSQAPPPALGHGPSNLFGGIMANQGGSGPGYQPGAAVNGYGPPPPPTASPGPGKRPRAPPGPATPQQAHQLAYPESRVSPQLARPTPPNQPVVRDRPGNMLANWNPEDLPPSQKKEGVDWYAVFNPEVQRVLDVELVHHLVHDSVVCCVRFSRDGKYLATGCNRSAQIFDVTLGQNVAVLQDESVDKSGDLYIRSVCFSPDGKYLATGAEDKQIRVWDIATRTIKHIFSGHEQDIYSLDFAGNGRYIASGSGDKTVRLWDIAEGKLVYTLSIEDGVTTVAMSPDGLYVAAGSLDKTVRVWDTTTGYLVERLENPDGHKDSVYSVAFAPNGKELVSGSLDKTIKLWELNLPRQQYNSAGKGGKCHRTFEGHKDFVLSVCLTPDGHWVMSGSKDRGVQFWDPITGNAQMMLQGHKNSVISVAPSPTGNLFATGSGDMRARIWRYSAYTGR
Protein: Nucleolar protein interacting with the FHA domain of MKI67 (C9J6C5)
Organism: Homo sapiens (Human)
Subcellular location: Nucleus, nucleolus {ECO:0000256|ARBA:ARBA00004604}.
Interaction partners:
Sequence:
MATFSGPAGPILSLNPQEDVEFQKEVAQVRKRITQFGTVTRFRLSRSKRTGNSKGYAFVEFESEDVAKIVAETMNNYLFGERLLECHFMPPEKVHKELFKDWNIPFKQPSYPSVKRYNRNRTLTQKLRMEERFKKKERLLRKKLAKKGIDYDFPSLILQKTESISK