wanglab/gogpt-training-data huggingface dataset:
Protein: ATP-dependent zinc metalloprotease FtsH (EC 3.4.24.-) (Cell division protease FtsH) (P37476)
Organism: Bacillus subtilis (strain 168)
Function: Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins.
Subcellular location: Cell membrane {ECO:0000269|PubMed:22882210, ECO:0000269|PubMed:23651456, ECO:0000269|PubMed:27362352, ECO:0000305|PubMed:10851010}; Multi-pass membrane protein {ECO:0000305|PubMed:10851010}; Cytoplasmic side {ECO:0000305|PubMed:10851010}. Membrane raft {ECO:0000269|PubMed:22882210, ECO:0000269|PubMed:23651456, ECO:0000269|PubMed:27362352}; Multi-pass membrane protein. Note=Accumulates in the midcell septum during vegetative cell division. At the septa colocalizes with FloA and FloT, which seem to stabilize it in the membrane (PubMed:10851010, PubMed:22882210). At the onset of sporulation appears at positions near the cell poles that may coincide with future division sites. Then, FtsH becomes concentrated at the sporulation septum and disappears from the distal pole (PubMed:10851010). Present in detergent-resistant membrane (DRM) fractions that may be equivalent to eukaryotic membrane rafts; these rafts include proteins involved in signaling, molecule trafficking and protein secretion (PubMed:22882210, PubMed:23651456). {ECO:0000269|PubMed:10851010, ECO:0000269|PubMed:22882210, ECO:0000269|PubMed:23651456}.
Interaction partners:
- ATP-dependent Clp protease ATP-binding subunit ClpX
- Chaperone protein DnaK
- GTP cyclohydrolase 1
- ATP-dependent Clp protease proteolytic subunit
- Hypoxanthine-guanine phosphoribosyltransferase
- Protease HtpX homolog
- Protein translocase subunit SecY
- Large ribosomal subunit protein uL13
- Chaperonin GroEL
- ATP-dependent protease subunit ClpQ
Sequence:
MNRVFRNTIFYLLILLVVIGVVSYFQTSNPKTENMSYSTFIKNLDDGKVDSVSVQPVRGVYEVKGQLKNYDKDQYFLTHVPEGKGADQIFNALKKTDVKVEPAQETSGWVTFLTTIIPFVIIFILFFFLLNQAQGGGSRVMNFGKSKAKLYTEEKKRVKFKDVAGADEEKQELVEVVEFLKDPRKFAELGARIPKGVLLVGPPGTGKTLLAKACAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFENAKKNAPCLIFIDEIDAVGRQRGAGLGGGHDEREQTLNQLLVEMDGFSANEGIIIIAATNRADILDPALLRPGRFDRQITVDRPDVIGREAVLKVHARNKPLDETVNLKSIAMRTPGFSGADLENLLNEAALVAARQNKKKIDARDIDEATDRVIAGPAKKSRVISKKERNIVAYHEGGHTVIGLVLDEADMVHKVTIVPRGQAGGYAVMLPREDRYFQTKPELLDKIVGLLGGRVAEEIIFGEVSTGAHNDFQRATNIARRMVTEFGMSEKLGPLQFGQSQGGQVFLGRDFNNEQNYSDQIAYEIDQEIQRIIKECYERAKQILTENRDKLELIAQTLLKVETLDAEQIKHLIDHGTLPERNFSDDEKNDDVKVNILTKTEEKKDDTKE
Protein: Alpha-centractin (Centractin) (ARP1) (Actin-RPV) (Centrosome-associated actin homolog) (P61163)
Organism: Homo sapiens (Human)
Function: Part of the ACTR1A/ACTB filament around which the dynactin complex is built. The dynactin multiprotein complex activates the molecular motor dynein for ultra-processive transport along microtubules.
Subcellular location: Cytoplasm, cytoskeleton {ECO:0000250|UniProtKB:P85515}. Cytoplasm, cytoskeleton, microtubule organizing center, centrosome {ECO:0000269|PubMed:14654843}. Cytoplasm, cell cortex {ECO:0000269|PubMed:22327364}.
Interaction partners:
- Dynactin subunit 4
- Dynactin subunit 5
- Dynactin subunit 6
- Dynactin subunit 2
- Actin-related protein 10
- Dynactin subunit 1
- Dynactin subunit 3
- Cytoplasmic dynein 1 heavy chain 1
- Beta-centractin
- F-actin-capping protein subunit alpha-1
Sequence:
MESYDVIANQPVVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHVRVMAGALEGDIFIGPKAEEHRGLLSIRYPMEHGIVKDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPRKNRERAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRIDIAGRDVSRFLRLYLRKEGYDFHSSSEFEIVKAIKERACYLSINPQKDETLETEKAQYYLPDGSTIEIGPSRFRAPELLFRPDLIGEESEGIHEVLVFAIQKSDMDLRRTLFSNIVLSGGSTLFKGFGDRLLSEVKKLAPKDVKIRISAPQERLYSTWIGGSILASLDTFKKMWVSKKEYEEDGARSIHRKTF
Protein: Protein NPGR1 (NO POLLEN GERMINATION RELATED 1) (Q9CB03)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Interaction partners:
- Phosphatidylinositol 4-kinase alpha 2
- Phosphatidylinositol 4-kinase alpha 1
- At5g64090
- Uncharacterized protein
- Uncharacterized protein
- ARM repeat superfamily protein
- ARM repeat superfamily protein
- Hyccin
- Mitochondrial substrate carrier family protein
- AT3g56990/F24I3_70
Sequence:
MLCACSGEQFRFEDQPGSPESLATRDFSASGLSSRNGGGDWDSKLEDIQVDEAESTLKEALSLNYEEARALLGRLEYQRGNFDAALQVFKGIDIKVLTPRIIKAIVEKTLPCKPRSKAVIVPPTTMSMHSVSLLLEAILLKARSLEELGSYKEAAEECKIILDVVENALPSGMPDGISGFAKLQDIFQKALELLPLLWKKAGNHHETIASYRRALSRPWNLDPQRLAVTQKSLALVLLYGSVEACPKDNIEEAIVLLMLLVKKMVVGDIQWDPELMDHLTYALSMTGQFEVLANYLEQTLPGVYTRGERWYLLSLCYSAAGIDKAAINLLKMALGPSESRQIPHIPLLLFGAKLCSKDPKHSRDGINFAHRLLDLGNSQSEHLLSQAHKFLGVCYGNAARSSKLDSERVFLQKKSLFSLNEAAKRGKADPELDVIFNLSVENAVQRNVQAALDGAVEYSSMVGGVSTKGWKHLAIVLSAEKRLKDAESILDFTMEEAGDIEKIELLRLKAVLQMAQEQPKKAMKTCSSLLGLIRAQEKSEQSESLLQKFETEAWQDLASVYGKLGSWSDAETCLEKARSMCYYSPRGWNETGLCLEAKSLHEEALISFFLSLSIEPDHVPSIVSIAEVMMKSGDESLPTAKSFLMNALRLDPRNHDAWMKLGHVAKKQGLSQQAAEFYQAAYELELSAPVQSFI
Protein: Type IV pilus non-core minor pilin PilE (G3XD43)
Organism: Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Function: Essential component of the type IV pilus (T4P) that plays a role in surface and host cell adhesion, colonization, biofilm maturation, virulence, and twitching, a form of surface-associated motility facilitated by cycles of extension, adhesion, and retraction of T4P fibers. May stabilize interactions between the major and a minor pilin subcomplex required for efficient pilus biogenesis.
Subcellular location: Cell inner membrane {ECO:0000255}; Single-pass membrane protein {ECO:0000255}.
Interaction partners:
- Type IV pilus biogenesis factor PilY1
- Type II secretion system protein H
- Type 4 fimbrial biogenesis protein PilV
- Type 4 fimbrial biogenesis protein PilW
- Type 4 fimbrial biogenesis protein PilX
- Type 4 fimbrial biogenesis protein PilY2
- Type IV pilus inner membrane component PilN
- Type IV pilus inner membrane component PilM
- Fimbrial assembly protein PilQ
- Type IV pilus assembly protein PilF
Sequence:
MRTRQKGFTLLEMVVVVAVIGILLGIAIPSYQNYVIRSNRTEGQALLSDAAARQERYYSQNPGVGYTKDVAKLGMSSANSPNNLYNLTIATPTSTTYTLTATPINSQTRDKTCGKLTLNQLGERGAAGKTGNNSTVNDCWR
Protein: SHOCT domain-containing protein (P95032)
Organism: Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
Interaction partners:
Sequence:
MLARYIKMQLLVLLCGGLVGPIFLVVYFTLGLGSLMSWMFYVGLIITVADVLVALALTNYGAKTAAKTAALERSGVLALAQITGLSETGTRINDQPLVKVHLHISGPGITPFDTEDRVIASVTRLGNLTARKLVVLVNPATQQYLIDWERSALVNGLVPAQFTVAEDNKTYDLSGQTGPLMEILQILKANNVPLNRMVDIRSNPALRQQVQAVVRRAAERQAPAAEPASQGSIAERLAELESLRASGAVNAAEYESKRAQIISEI
Protein: Trialysin (Triatoma infestans cytolysin) (Q8T0Z3)
Organism: Triatoma infestans (Assassin bug)
Function: Pore-forming protein that induces lysis of T.cruzi trypomastigotes, bacteria E.coli and human red blood cells. The parasite lysis is much more important than the hemolysis, probably due to difference in membrane composition. Its action on protozoan parasites and bacteria may indicate a role in the control of microorganism growth in the salivary glands.
Subcellular location: Secreted {ECO:0000269|PubMed:11751887}. Target cell membrane {ECO:0000305|PubMed:11751887}.
Interaction partners:
Sequence:
MSKFWLLLLLVAAFQFAHSYPAAEYELDETTNDEVRQFIGDGYFEDEGDDGDEERFKIKPGKVLDKFGKIVGKVLKQLKKVSAVAKVAMKKGAALLKKMGVKISPLKCEEKTCKSCVIFKIPTENSFCLTIRFMKTNIATYLVVAGEINRKSKFEEKLKLGNMPRCVNVEGFIGKVCMKGIEGHAKSSSGQANVNFCLGLVAEKFGVGAKLCGIYANKKVRVKISPQLFPGATSLDGDIVKLDDNGEDATTLDVDEVEID
Protein: Transforming growth factor beta (Q7SZV4)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Subcellular location: Secreted, extracellular space, extracellular matrix {ECO:0000256|ARBA:ARBA00004498}.
Interaction partners:
Sequence:
MNLYVLSLLLLLDLAAVAVSLSTCSTVDMDQFKKKRIEAIRGQILSKLKLSSPPEIYPEPEEVSRGIIAIYNSTRDLLQEKANERAATCERQRSEEEYYAKEVHKIDMQPFYPSENVILSQHYYPYFRRLMFDVSSMEKNASNLVKAQLRIFRLQNPKARVFEQRIELYQVLGHKDLTSPTQRYINSKVVRTRTEGEWLSFDVTEAVSEWLLHRDRNKGFKISLHCPCCTFVPSNNYIIPNKSEELETRFAGIDDSFVNGGDLKMFKKRRHSGQSPHLLLMLLPSYRLESQHKSHRQKRALDTAFCSRNVQDNRCLRSLYIDFKKDLGWRWIHEPKGYNANFCAGACPYLWSADTQHSNILGLYNTINPEASASPCCVSQDLEPLTILYYIGKTPKIEQLSNMIVKSCKCS
Protein: Leucine-rich repeat (LRR) family protein (Q8RWI2)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Interaction partners:
Sequence:
MGCCASNTAGGSKANRISRWRSTGIVGLRDSKLKTFPDEVIEMERAVRTLDLTHNKIADVPGEISKLINMQRLLIADNLVERLPGNLGKLQSLKVLMLDGNRISCLPDELGQLVRLEQLSISRNMLIYLPDTIGSLRNLLLLNVSNNRLKSLPESVGSCASLEEVQANDNVVEELPASLCNLIQLKSLSLDNNQVNQIPDGLLIHCKSLQNLSLHNNPISMDQFQLMEGYQDFEERRKKKFDKQIDSNVMMGSKALDVGVDK
Protein: Envelope protein (Q91CG6)
Organism: Kunjin virus
Subcellular location: Host endoplasmic reticulum membrane {ECO:0000256|ARBA:ARBA00004153}; Multi-pass membrane protein {ECO:0000256|ARBA:ARBA00004153}. Virion membrane {ECO:0000256|ARBA:ARBA00004385}; Multi-pass membrane protein {ECO:0000256|ARBA:ARBA00004385}.
Interaction partners:
Sequence:
NDKRADPSFVCKQGVVDRGWGNGCGLFGKGSIDTCAKFACSTKATGRTILKENIKYEVAIFVHGPTTVESHGNYFTQTGAAQAGRFSITPAAPSYTLKLGEYGEVTVDCEPRSGIDTSAYYVMTVGTKTFLVHREWFMDLNLPWSSAESNVWRNRETLMEFEQPHA
Protein: Rho guanine nucleotide exchange factor 3, isoform C (Q8IRJ2)
Organism: Drosophila melanogaster (Fruit fly)
Interaction partners:
Sequence:
MLRIDKILVVSRGKSQQIKAVSSPTLSEPCLEEQPQKGTESTDVANTGSSAGSGGLGVLQKFKRTLNNFNNKNQLHISPLSPAAVGNNAPKTKTSPTTTTASIAPMITTTTASDPGSEAGDTSSGKYRFGPLIWRSSKERRKTKYNRRDKCNSGDSGIQIELEQDEQYSRATMAVSRQDEPRAFALTNGSCGVALSKMRAIRRTNSAKASSILGPFIVKTKIAKHLNIGESDKAERKAPESLPTRSLSQPNGLESYGMGRPDLEDSDSDSVASNEEAISFYPTTYAEVLYNFTAGGPQELGLERGMLIEILRKEVGPWWFGRIKKEETNLVEDILGPELGWFPKEFVRIIHCPETDNFFIAHRAAADEAAAEEATARAEEGSVPVPVAAFAEDTDVTVTTDQSNVTLIVIESPPTPSAPSVDFVAQPDHSTIIRRSAVRELLDTEVNYVKLLAAICDGYLPAMSKRIDIFSPNSIRLIFSNITAIYKFQRKFLEALRRGIEQNQVAKVFLKMHKGFLCYSTYCNAYPRALIELETYDRVKDARTILENCRESQNLAELPLSAHLLAPVQRICRYPLHLNEIIKSALEKGAKEGNDTDGAKSAGKTTDYEQLDVTELDIPDSQDTVNLALEAMRGITEAVNEGKRHSETIARHQASFQNFKGPPLHLHSARFFLQVDATRQKQNLWNSSYTLFLFDNQLVYCKRDIIKRSHFIYKGRIFLDRCRVVNVRDGKMFGHTIKNSLRIYSESRDKWYDFSFRSANRKHRFLSTLALERQFGGKALYVSEMTGFEYNYEERPGDYSDQSDYDAQDFELATGVTSGESSLPESPAKSTSRLCETLPKKSQSRDGISSAENSQIVTTTSTGSLGRRHFGNWFRKPKSANCTPSQSPTHKPSFDADATLTEARVAAMELAEAAAALVPTDSSSA
Protein: Probable ATP-dependent RNA helicase DDX43 (EC 3.6.4.13) (Cancer/testis antigen 13) (CT13) (DEAD box protein 43) (DEAD box protein HAGE) (Helical antigen) (Q9NXZ2)
Organism: Homo sapiens (Human)
Interaction partners:
- Melanoma-associated antigen 1
- Sarcoma antigen 1
- demerged
Sequence:
MSHHGGAPKASTWVVASRRSSTVSRAPERRPAEELNRTGPEGYSVGRGGRWRGTSRPPEAVAAGHEELPLCFALKSHFVGAVIGRGGSKIKNIQSTTNTTIQIIQEQPESLVKIFGSKAMQTKAKAVIDNFVKKLEENYNSECGIDTAFQPSVGKDGSTDNNVVAGDRPLIDWDQIREEGLKWQKTKWADLPPIKKNFYKESTATSAMSKVEADSWRKENFNITWDDLKDGEKRPIPNPTCTFDDAFQCYPEVMENIKKAGFQKPTPIQSQAWPIVLQGIDLIGVAQTGTGKTLCYLMPGFIHLVLQPSLKGQRNRPGMLVLTPTRELALQVEGECCKYSYKGLRSVCVYGGGNRDEQIEELKKGVDIIIATPGRLNDLQMSNFVNLKNITYLVLDEADKMLDMGFEPQIMKILLDVRPDRQTVMTSATWPHSVHRLAQSYLKEPMIVYVGTLDLVAVSSVKQNIIVTTEEEKWSHMQTFLQSMSSTDKVIVFVSRKAVADHLSSDLILGNISVESLHGDREQRDREKALENFKTGKVRILIATDLASRGLDVHDVTHVYNFDFPRNIEEYVHRIGRTGRAGRTGVSITTLTRNDWRVASELINILERANQSIPEELVSMAERFKAHQQKREMERKMERPQGRPKKFH
Protein: K+ efflux antiporter 2 (F4JHE9)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Subcellular location: Membrane {ECO:0000256|ARBA:ARBA00004141}; Multi-pass membrane protein {ECO:0000256|ARBA:ARBA00004141}.
Interaction partners:
Sequence:
MDFASSVQRQSMFHGGADFASYCLPNRMISAKLCPKGLGGTRFWDPMIDSKVRSAIRSKRNVSYRSSLTLNADFNGRFYGHLLPAKPQNVPLGFRLLCQSSDSVGDLVGNDRNLEFAEGSDDREVTFSKEEKDTREQDSAPSLEELRDLLNKATKELEVASLNSTMFEEKAQRISEVAIALKDEAASAWNDVNQTLNVVQEAVDEESVAKEAVQKATMALSLAEARLQVALESLEAEGYNTSEESEVRDGVKDKEEALLSAKADIKECQENLASCEEQLRRLQVKKDELQKEVDRLNEAAERAQISALKAEEDVANIMVLAEQAVAFELEATQRVNDAEIALQRAEKTLFGSQTQETTQGKVLDGKNTIVGEDEVLSEIVDVSHQAERDLVVVGVSSDVGTQSYESDNENGKPTADFAKEAEGEAEKSKNVVLTKKQEVQKDLPRESSSHNGTKTSLKKSSRFFPASFFSSNGDGTATVFESLVESAKQQWPKLILGFTLLGAGVAIYSNGVGRNNQLPQQPNIVSTSAEDVSSSTKPLIRQMQKLPKRIKKLLEMFPQQEVNEEEASLLDVLWLLLASVIFVPLFQKIPGGSPVLGYLAAGILIGPYGLSIIRNVHGTKAIAEFGVVFLLFNIGLELSVERLSSMKKYVFGLGSAQVLVTAAVIGLITHYVAGQAGPAAIVIGNGLALSSTAVVLQVLQERGESTSRHGRATFSVLLFQDLAVVVLLILIPLISPNSSKGGIGFQAIAEALGLAAIKAAVAITGIIAGGRLFYNALIFWYTQLLRPIYKQIAENRNAEIFSANTLLVILGTSLLTARAGLSMALGAFLAGLLLAETEFSLQVESDIAPYRGLLLGLFFMTVGMSIDPKLLLANFPLIMGTLGLLLVGKTILVVIIGKLFGISIISAVRVGLLLAPGGEFAFVAFGEAVNQGIMTPQLSSLLFLVVGISMALTPWLAAGGQLIASRFELQDVRSLLPVESETDDLQGHIIICGFGRIGQIIAQLLSERLIPFVALDVSSDRVAIGRSLDLPVYFGDAGSREVLHKIGADRACAAAIALDTPGANYRCVWALSKYFPNVKTFVRAHDVDHGLNLEKAGATAVVPETLEPSLQLAAAVLAQAKLPTSEIATTINEFRSRHLSELAELCEASGSSLGYGFSRSTSKPKPPSPSETSDDNQIIEGTLAI
Protein: UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase (EC 2.7.8.15) (GlcNAc-1-P transferase) (N-acetylglucosamine-1-phosphate transferase) (A0A8I6GKZ9)
Organism: Rattus norvegicus (Rat)
Subcellular location: Endoplasmic reticulum membrane {ECO:0000256|ARBA:ARBA00004477}; Multi-pass membrane protein {ECO:0000256|ARBA:ARBA00004477}.
Interaction partners:
Sequence:
MIGWGWALEFGLFGFGKRMLVTPTVATGILGLVTEYFPSMGNASGSIPNLERKKKREFLKDLVMTCLLLPQFVALIGALLAICCMIFLGFADDVLNLRWRHKLLLPTAASLPLLMVYFTNFGNTTIVVPKPFRWILGLHLDLGILYYVYMGLLAVFCTNAINILAGINGLEAGQSLVISASIIVFNLVELEGDYRDDHVFSLYFMMPFFFTTLGLLYHNWYPSQVFVGDTFCYFAGMTFAVVGILGHFSKTMLLFFMPQVFNFLYSLPQLFQIIPCPRHRMPRLNTKTGKLEMSYSKFKTKSLSFLGTFILKVAESLRLVTVHRGESEDGAFTECNNMTLINLLLKVFGPTHERNLTLFLLLLQVLSSAVTFSIRYQLVRLFYDV
Protein: Monodehydroascorbate reductase 3, cytosolic (OsMDAR3) (OsMDHAR3) (EC 1.6.5.4) (Q652L6)
Organism: Oryza sativa subsp. japonica (Rice)
Function: Catalyzes the conversion of monodehydroascorbate to ascorbate, oxidizing NADH in the process. Ascorbate is a major antioxidant against reactive oxygen species (ROS) and nitric oxide (NO). Can use NADPH as electron donor, but possesses lower activity compared to NADH as electron donor.
Subcellular location: Cytoplasm {ECO:0000305}.
Interaction partners:
- Probable glutathione S-transferase DHAR1, cytosolic
- Nitrate reductase 1
- Nitrate reductase
- Nitrate reductase
- Os11g0242400 protein
- L-ascorbate oxidase
- Os01g0816700 protein
- L-gulonolactone oxidase
- L-ascorbate oxidase
- Probable glutathione S-transferase DHAR2, chloroplastic
Sequence:
MASEKHFKYVILGGGVAAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKGYLFPQNAARLPGFHVCVGSGGERLLPEWYSEKGIELILSTEIVKADLASKTLTSAVGATFTYEILIIATGSSVIKLSDFGTQGADSNNILYLREVDDADKLVAAIQAKKGGKAVIVGGGYIGLELSAALKINDFDVTMVFPEPWCMPRLFTADIAAFYESYYTNKGVKIVKGTVAVGFDADANGDVTAVNLKNGSVLEADIVVVGVGGRPLTTLFKGQVAEEKGGIKTDAFFETSVPGVYAVGDVATFPMKMYNELRRVEHVDHARKSAEQAVKAIKGKESGESVVEYDYLPYFYSRSFDLGWQFYGDNVGDTILFGDSDPTSAKPKFGSYWIKDGKVLGAFLEGGSPDENKAIAKVAKTQPPVANIEELKKEGLQFASKI
Protein: 3-ketoacyl-CoA synthase (EC 2.3.1.-) (Q8VWP9)
Organism: Gossypium hirsutum (Upland cotton) (Gossypium mexicanum)
Interaction partners:
- Very-long-chain 3-oxoacyl-CoA reductase-like protein At1g24470
- Very-long-chain 3-oxoacyl-CoA reductase-like protein At1g24470
- Very-long-chain 3-oxoacyl-CoA reductase 1-like
- Very-long-chain 3-oxoacyl-CoA reductase 1-like
- Very-long-chain 3-oxoacyl-CoA reductase 1-like
- Very-long-chain 3-oxoacyl-CoA reductase 1-like
- Integrator complex subunit 3-like
- Very-long-chain 3-oxoacyl-CoA reductase 1-like
- Very-long-chain 3-oxoacyl-CoA reductase 1-like
- Uncharacterized protein LOC107927639 isoform X1
Sequence:
MARNEQDLLSTEIVNRGIESSGPNAGSLTFSVRVRRRLPDFLQSVNLKYVKLGYHYLINHGIYLATIPVLVLVFSAEVGSLSREELWKKLWEDARYDLATVLSFFAVFVFTVSVYFMSRPRSIYLIDFACYRPHDDLKVTKDQFIELARASGKFDEASLEFQKKILKSSGIGDETYVPKVIMSKENCATMKEGRLEASTVMFGALDELFEKTRIRPKDVGVLVVNCSIFNPTPSLSAMIINHYKMRGNILSYNLGGMGCSAGIIAVDLARDMLQANPNNYAVVVSTEMVGYNWYPGRDRSMLVPNCFFRMGCSAVLLSNRRRDYRRAKYRLEHLVRTHKGADDRSFRSIYQEEDEQGFKGLKVSKDLTEIGGDALKTNITTLGPLVLPFSEQLFFFATLIWRHFFGGDKSKTSLSPSSKPYIPDYKLAFEHFCVHAASKTVLDELQKNLELSENNMEASRMTLHRFGNTSSSSIWYELAYLEAKERVKRGDRIWQIAFGSGFKCNSVVWRSMRRVRKPSRDNPWLDCIDRYPVRA
Protein: Sm protein B (Q586Q6)
Organism: Trypanosoma brucei brucei (strain 927/4 GUTat10.1)
Subcellular location: Cytoplasm {ECO:0000256|ARBA:ARBA00004496}. Nucleus {ECO:0000256|ARBA:ARBA00004123}.
Interaction partners:
- Uncharacterized protein
- Cell division control protein, putative
- Splicing factor 3A, putative
- U6 snRNA-associated Sm-like protein LSm4
- Small nuclear ribonucleoprotein SmD1
- Uncharacterized protein
- Pre-mRNA-processing factor 19
- SURP motif domain-containing protein
- Sm protein G
- U5 small nuclear ribonucleoprotein component, putative
Sequence:
MGHQNMLHNINRTLRVTLVDGREMTGKMLLFDKFMNVVLADTVETRKETKKMKDAGISPQRKLGMILLRGEYVVAVSVLKDNVSEDKAQPANFESATREKLAGAKRKRD
Protein: Verprolin 1, isoform H (E1JGR9)
Organism: Drosophila melanogaster (Fruit fly)
Interaction partners:
Sequence:
MRLKRSSKQKMAIPPPPGPPPPPGPPPPPAMGGLKLGGAGGADARSALLSSIQKGTKLKKTTTVDKSGPALSGKVCGGDGGAGIGAKRTLNNNTSTSNHNNSSSSSNGLGNGTPKLGGLFEGLSQMPKLKPVNGIRATPSAGSAATTTSKSTTNSSAQQRSNSPPAATSASNASNGPMDFNTELTKHLTLKRQKQQQQQQPQPPTNNTHINATEANLRTNRGPPPQPPKSANSNDSILERMNIPRTAPTPPFGNSSSVKAASPTLSDSGSNSSGSGGGSGSVKSKAANLNISLGNSFVNSSKSTVSASTASLNSSLTSSTGSVRNLAPNKSTLFGGSSGSSSGSSSGGGYASVHKSSPPSTADSTPSVTPTPPPLQLPMKPAISFGKPNFAPKPPGLNQLAMANGQQRPAVTRHHSMKSPRSPPAAGIVNGLVFPTQQHLGTLRGPLQFHGSESSSPNTSAGSMRCAPNPPKSRPSVKPPPPPTPARSFSNTNLNNIGGSTMFSAVNTALIQSSAISSQAPSPPITQPPSSSSSSNSVAALRDQFRGGAGMSNGAPSPPLPPTPAPSSNPSSASASPKSLLRDNVKPIILNGGPLNPPAPPPHRSCPPPPPPQRQSSNGGSGSGSAPVPPQRHSSIRPNAPSTPPTHMANASHQFGSSSGLSSGSGAGAAASVGRLVNDLETKFGKRFHNVTEFPKPPPFLNIQKVYPSRTFKATNGM
Protein: Receptor-type tyrosine-protein phosphatase gamma (Protein-tyrosine phosphatase gamma) (R-PTP-gamma) (EC 3.1.3.48) (P23470)
Organism: Homo sapiens (Human)
Function: Possesses tyrosine phosphatase activity.
Subcellular location: Membrane {ECO:0000305}; Single-pass type I membrane protein {ECO:0000305}.
Interaction partners:
- Contactin-3
- Contactin-4
- Contactin-6
- 6-pyruvoyl tetrahydrobiopterin synthase
- Epidermal growth factor receptor
- Bis
Sequence:
MRRLLEPCWWILFLKITSSVLHYVVCFPALTEGYVGALHENRHGSAVQIRRRKASGDPYWAYSGAYGPEHWVTSSVSCGGRHQSPIDILDQYARVGEEYQELQLDGFDNESSNKTWMKNTGKTVAILLKDDYFVSGAGLPGRFKAEKVEFHWGHSNGSAGSEHSINGRRFPVEMQIFFYNPDDFDSFQTAISENRIIGAMAIFFQVSPRDNSALDPIIHGLKGVVHHEKETFLDPFVLRDLLPASLGSYYRYTGSLTTPPCSEIVEWIVFRRPVPISYHQLEAFYSIFTTEQQDHVKSVEYLRNNFRPQQRLHDRVVSKSAVRDSWNHDMTDFLENPLGTEASKVCSSPPIHMKVQPLNQTALQVSWSQPETIYHPPIMNYMISYSWTKNEDEKEKTFTKDSDKDLKATISHVSPDSLYLFRVQAVCRNDMRSDFSQTMLFQANTTRIFQGTRIVKTGVPTASPASSADMAPISSGSSTWTSSGIPFSFVSMATGMGPSSSGSQATVASVVTSTLLAGLGFGGGGISSFPSTVWPTRLPTAASASKQAARPVLATTEALASPGPDGDSSPTKDGEGTEEGEKDEKSESEDGEREHEEDGEKDSEKKEKSGVTHAAEERNQTEPSPTPSSPNRTAEGGHQTIPGHEQDHTAVPTDQTGGRRDAGPGLDPDMVTSTQVPPTATEEQYAGSDPKRPEMPSKKPMSRGDRFSEDSRFITVNPAEKNTSGMISRPAPGRMEWIIPLIVVSALTFVCLILLIAVLVYWRGCNKIKSKGFPRRFREVPSSGERGEKGSRKCFQTAHFYVEDSSSPRVVPNESIPIIPIPDDMEAIPVKQFVKHIGELYSNNQHGFSEDFEEVQRCTADMNITAEHSNHPENKHKNRYINILAYDHSRVKLRPLPGKDSKHSDYINANYVDGYNKAKAYIATQGPLKSTFEDFWRMIWEQNTGIIVMITNLVEKGRRKCDQYWPTENSEEYGNIIVTLKSTKIHACYTVRRFSIRNTKVKKGQKGNPKGRQNERVVIQYHYTQWPDMGVPEYALPVLTFVRRSSAARMPETGPVLVHCSAGVGRTGTYIVIDSMLQQIKDKSTVNVLGFLKHIRTQRNYLVQTEEQYIFIHDALLEAILGKETEVSSNQLHSYVNSILIPGVGGKTRLEKQFKLVTQCNAKYVECFSAQKECNKEKNRNSSVVPSERARVGLAPLPGMKGTDYINASYIMGYYRSNEFIITQHPLPHTTKDFWRMIWDHNAQIIVMLPDNQSLAEDEFVYWPSREESMNCEAFTVTLISKDRLCLSNEEQIIIHDFILEATQDDYVLEVRHFQCPKWPNPDAPISSTFELINVIKEEALTRDGPTIVHDEYGAVSAGMLCALTTLSQQLENENAVDVFQVAKMINLMRPGVFTDIEQYQFIYKAMLSLVSTKENGNGPMTVDKNGAVLIADESDPAESMESLV
Protein: Protein LZIC (Leucine zipper and CTNNBIP1 domain-containing protein) (Leucine zipper and ICAT homologous domain-containing protein) (Q6DHH7)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Function: Required for neuronal survival during early development.
Interaction partners:
- G protein-coupled receptor 157.
- Beta-catenin-interacting protein 1
- dCTP pyrophosphatase 1
Sequence:
MASRGKSETSKLRQNMEEQLDRLMQQLQDLEECREDLEEEEYEETKKETLEQLSEFNDSLKKLMSGNMTLVDELGGMQLAIQAAISQAFKTPEVIRLFAKKQPGQLRTRLAEMDRDVMVGKLSRDVFTQQKVEILTALRKLGEKLTTEDEAFLAANASATLSHFEKVTASLGSEDKIMALASSGVGKTQT
Protein: Replication factor C subunit 1 (Q9Z2R7)
Organism: Rattus norvegicus (Rat)
Subcellular location: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
Interaction partners:
Sequence:
MDIRKFFGVISSGKKPVNETVKKNEKTKPSEGTVKGKKGVKVAKVNNPCKEDASRPKQHTEKRGSSMTQIQNQRRHVQVKDAKKKSEKLPRVLVNLVNLSEGSSLPHISETDEDAVTFYVKRQPPNQKRMEYLRNSYLGASNVKKNEENTKTKSKPLSPIKLTPTSVLDYFGTESVQRSGKKMVASKKKESSQTPDDSRLNDEAIAKQLQLDEDAELERQLHEDEEFARTLALLDEEPKTKKARKDSEEGESFSPAKAELSKAAKQKSPANEHFSIGRKTYSPAKYGKGRGSEGTKQPCRSAHQTEACSSLKASSKLALMKAQEENSHTDTELLAAKRESAIEPKGEKTTPRKTKGSPTKRESVSPEDSEKKRTNYQAYRSYLNREGPKALGSKEIPKGAENCLEGLTFVITGVLESIEREEAKSLIERYGGKVTGNVSKKTSYLVMGRDSRQSKSDKAAALGTKILDEDGLLDLIRTMPGKKSKYEIAAEAEMKKEKSKLERTPQKNDQGKRKLSPTKRELEPKKSKLTPLKHSPRKAVKEEERVCPRGLDAKEPHGSHSASREECLLWVDKYKPTSLKNIIGQQGDQSCANKLLRWLRNWHKSSPEEKKHAKFGKVASKDDGSSFKAALLSGPPGVGKTTTASLVCQELGYSYVELNASDTRSKNSLKAIVAESLNNTSIKGFYTSGASPSVSARHALIMDEVDGMAGNEDRGGIQELIGLIKHTKIPIICMCNDRNHPKIRSLVHYCFDLRFQRPRVEQIKSAMLSIAFKEGLKIPPPAMNEIILGANQDVRQVLHNLSMWCAQSKVLTYDQAKADSQRAKKDIRLGPFDVTRKVFAAGEETPHMSLMDKSDLFFHDYSIAPLFVQENYLHVKPVAAGGDMKKHLMLLSRAADSICDGDLVANQIRSKQNWSLSHTGHLRQRCSWRVDEGLHVSVSQLPKAGWESTRLWASTDRTVQDLSLHMSLRTYSSKRTVNMDYLSHIRDALVRPLTSQGVEGVQRVVTLMLVKEDFDNIMEVSSDTYYWGGKPSTFSKLDPKVKAAFTRAYNKEAHLTPYSLQVVKASRPSIGPALDSEYNEESQEDATQSDEKEQDALETDAMIK
Protein: Pentatricopeptide repeat-containing protein CRP1, chloroplastic (Protein CHLOROPLAST RNA PROCESSING 1) (A0A1D6IEG9)
Organism: Zea mays (Maize)
Function: Required for the translation of the chloroplast petA and petD mRNAs. Required for the processing of the petD mRNA from a polycistronic precursor. Binds with high affinity to the 5'-UTR of the chloroplastic petA transcript. Activates psaC and petA translation by binding their 5'-UTRs.
Subcellular location: Plastid, chloroplast stroma {ECO:0000269|PubMed:10228173}.
Interaction partners:
- Cytochrome b6-f complex subunit 4
- Photosystem II reaction center protein H
- Photosystem I iron-sulfur center
- ATP synthase subunit c, chloroplastic
- Cytochrome b6
- CYTB_NTER domain-containing protein.
Sequence:
MPASLLPPTFLPHHLRRLAPAGCTTSSVTSSSVSIPASRYDFEPLLAYLSSPSVSASLTSPSPPASVPAPEHRLAASYSAVPSHEWHALLRDLAASDASLPLAFALLPFLHRHRLCFPLDLLLSSLLHSLSVSGRLLPHSLLLSFPPSLSDPPSPLLLNSLLAASAAASRPAVALRLLSLLREHDFLPDLASYSHLLASLLNTRDPPDAALLERLLGDLRESRLEPDAPLFSDLISAFARAALPDAALELLASAQAIGLTPRSNAVTALISALGTAGRVAEAEALFLEFFLAGEIKPRTRAYNALLKGYVRIASLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFNKMREEGIEPDVVTWNTLIDAHCKGGRHDRAAELFEEMRESNCPPGTTTYNIMINLLGEQEHWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMKADGLEVSILVLNSLINAFGEDRRVVEAFSVLQFMRENGLRPDVITYTTLMKALIRVEQFDKVPVIYEEMITSGCAPDRKARAMLRSGLKYIKHMRVA
Protein: Ranacyclin-E (P83663)
Organism: Pelophylax lessonae (Pool frog) (Rana lessonae)
Function: Has antibacterial activity against Gram-positive bacteria B.megaterium Bm11, S.lentus and M.luteus, Gram-negative bacteria Y.pseudotuberculosis YP III and P.syringae pv tabaci, and antifungal activity against C.tropicalis, C.guiller-mondii and P.nicotianae spores. Has hemolytic activity. The mature peptide inserts into the hydrophobic core of the bacterial cell membrane and increases permeability without disrupting membrane integrity. Probably binds to the outer membrane surface before aggregating to form transmembrane pores.
Subcellular location: Secreted {ECO:0000269|PubMed:14636071}.
Interaction partners:
Sequence:
SAPRGCWTKSYPPKPCK