wanglab/gogpt-training-data huggingface dataset:
Protein: Small ribosomal subunit protein eS10x (40S ribosomal protein S10-3) (Q9LTF2)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Subcellular location: Cytoplasm {ECO:0000250}.
Interaction partners:
- Small ribosomal subunit protein eS7x
- Small ribosomal subunit protein uS14z/uS14y/uS14x
- Small ribosomal subunit protein uS9x
- Small ribosomal subunit protein eS30z/eS30y/eS30x
- Small ribosomal subunit protein uS15z
- Small ribosomal subunit protein eS1z
- Small ribosomal subunit protein eS24z
- Small ribosomal subunit protein eS12z
- Small ribosomal subunit protein eS28z/eS28y
- Small ribosomal subunit protein eS28x
Sequence:
MIISEANRKEICKYLFKEGVCFAKKDFNLAKHPLIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWFLTNEGIEFLRTYLNLPSDVVPATLKKSAKPGGRPFGGPPGDRSRGPRHEGGDRPRFGDRDGYRAGPRAGGEFGGEKGGAPADYQPSFQGSGRGFGRGAGGYSAAAPSGSGLP
Protein: Autophagy-related protein 8b (Autophagy-related ubiquitin-like modifier ATG8b) (AtAPG8b) (Protein autophagy 8b) (Q9XEB5)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Ubiquitin-like modifier involved in autophagosomes formation. May mediate the delivery of the autophagosomes to the vacuole via the microtubule cytoskeleton.
Subcellular location: Cytoplasmic vesicle, autophagosome membrane {ECO:0000250|UniProtKB:P38182}; Lipid-anchor {ECO:0000250|UniProtKB:P38182}. Vacuole membrane {ECO:0000250|UniProtKB:P38182}; Lipid-anchor {ECO:0000250|UniProtKB:P38182}. Cytoplasm, cytoskeleton {ECO:0000250|UniProtKB:Q8LEM4}.
Interaction partners:
- Protein NBR1 homolog
- Cysteine protease ATG4b
- Autophagy-related protein 3
- Ubiquitin-like modifier-activating enzyme atg7
- Cysteine protease ATG4a
- Ubiquitin-like protein ATG12A
- E3 ubiquitin-protein ligase PRT1
- Autophagy-related protein 18b
- Serine/threonine-protein kinase ATG1b
- Serine/threonine-protein kinase ATG1c
Sequence:
MEKNSFKLSNPLEMRMAESTRIRAKYPERVPVIVEKAGQSDVPDIDKKKYLVPADLTIGQFVYVVRKRIKLGAEKAIFVFVKNTLPPTAALMSAIYEEHKDEDGFLYMTYSGENTFGGSFYC
Protein: Uncharacterized HTH-type transcriptional regulator YbcM (P77634)
Organism: Escherichia coli (strain K12)
Interaction partners:
- UPF0098 protein YbcL
- HTH-type transcriptional regulator GadW
- Uncharacterized protein YkfM
- Porin thermoregulatory protein EnvY
Sequence:
MLARGKTNLKIEEIRMHKHHEIHRVKPLMPALCRIRQGKKVINWETHTLTVDNNQIILFPCGYEFYIENYPEAGLYLAEMLYLPIDLIESFQKLYTVTDQIRNKTSFFLPQNPELIYCWEQLKTSVSRGFSTKIQEHLAMGVLLSLGVNHVNHLLLSYSKQSLISRCYNLLLSEPGTKWTANKVARYLYISVSTLHRRLASEGVSFQSILDDVRLNNALSAIQTTVKPISEIARENGYKCPSRFTERFHNRFNITPREIRKASRE
Protein: Carotenoid isomerooxygenase (EC 1.13.11.65) (Beta-carotene 15,15'-monooxygenase and retinoid isomerase) (Beta-carotene dioxygenase and retinoid isomerase) (Neither inactivation nor afterpotential mutant B) (Q9VFS2)
Organism: Drosophila melanogaster (Fruit fly)
Function: Catalyzes the oxidative cleavage at the 15,15'-double bond of carotenoids and the simultaneous all-trans to 11-cis isomerization of one cleavage product. Carotenoids like 11-cis retinal can promote visual pigment biogenesis in the dark. Essential for the biosynthesis of the 3-hydroxyretinal chromophore of rhodopsin from zeaxanthin and for proper photoreceptor development. Also essential for larval light perception.
Interaction partners:
- FI02050p
- Neither inactivation nor afterpotential protein G
- Scavenger receptor acting in neural tissue and majority of rhodopsin is absent, isoform A
- Retinol-binding protein pinta
- GH05294p
- Opsin Rh1
- Argininosuccinate lyase, isoform B
Sequence:
MAAGVFKSFMRDFFAVKYDEQRNDPQAERLDGNGRLYPNCSSDVWLRSCEREIVDPIEGHHSGHIPKWICGSLLRNGPGSWKVGDMTFGHLFDCSALLHRFAIRNGRVTYQNRFVDTETLRKNRSAQRIVVTEFGTAAVPDPCHSIFDRFAAIFRPDSGTDNSMISIYPFGDQYYTFTETPFMHRINPCTLATEARICTTDFVGVVNHTSHPHVLPSGTVYNLGTTMTRSGPAYTILSFPHGEQMFEDAHVVATLPCRWKLHPGYMHTFGLTDHYFVIVEQPLSVSLTEYIKAQLGGQNLSACLKWFEDRPTLFHLIDRVSGKLVQTYESEAFFYLHIINCFERDGHVVVDICSYRNPEMINCMYLEAIANMQTNPNYATLFRGRPLRFVLPLGTIPPASIAKRGLVKSFSLAGLSAPQVSRTMKHSVSQYADITYMPTNGKQATAGEESPKRDAKRGRYEEENLVNLVTMEGSQAEAFQGTNGIQLRPEMLCDWGCETPRIYYERYMGKNYRYFYAISSDVDAVNPGTLIKVDVWNKSCLTWCEENVYPSEPIFVPSPDPKSEDDGVILASMVLGGLNDRYVGLIVLCAKTMTELGRCDFHTNGPVPKCLHGWFAPNAI
Protein: High mobility group protein B3 (High mobility group protein 2a) (HMG-2a) (High mobility group protein 4) (HMG-4) (O15347)
Organism: Homo sapiens (Human)
Function: Multifunctional protein with various roles in different cellular compartments. May act in a redox sensitive manner. Associates with chromatin and binds DNA with a preference for non-canonical DNA structures such as single-stranded DNA. Can bend DNA and enhance DNA flexibility by looping thus providing a mechanism to promote activities on various gene promoters (By similarity). Proposed to be involved in the innate immune response to nucleic acids by acting as a cytoplasmic promiscuous immunogenic DNA/RNA sensor (By similarity). Negatively regulates B-cell and myeloid cell differentiation. In hematopoietic stem cells may regulate the balance between self-renewal and differentiation. Involved in negative regulation of canonical Wnt signaling (By similarity).
Subcellular location: Nucleus {ECO:0000250|UniProtKB:P40618, ECO:0000255|PROSITE-ProRule:PRU00267}. Chromosome {ECO:0000305}. Cytoplasm {ECO:0000250|UniProtKB:O54879}.
Interaction partners:
Sequence:
MAKGDPKKPKGKMSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYDREMKDYGPAKGGKKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKAAKLKEKYEKDVADYKSKGKFDGAKGPAKVARKKVEEEDEEEEEEEEEEEEEEDE
Protein: RecQ-mediated instability-like protein (Q8RX36)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Interaction partners:
- DNA 5'-3' helicase FANCJ
- Regulator of telomere elongation helicase 1 homolog
- Crossover junction endonuclease MUS81
Sequence:
MDYSLAAVKMLCSQLRDAKPTPSQNAASLGGVLFQRAWLQGVLVPFSGGGGDNCLVLDDGTGLLELGLTNDFALRQWKSGMYVMVVGVYQVRTGQIPLLKVHKMVDLSVSPDREAMWYLEVMDAYRLFYEPLIQEFS
Protein: WD repeat-containing protein 21 (Q09873)
Organism: Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Subcellular location: Cytoplasm {ECO:0000269|PubMed:16823372}. Nucleus {ECO:0000269|PubMed:16823372}.
Interaction partners:
- DNA damage-binding protein 1
- DNA excision repair protein ckn1
- Chromatin modification-related protein rik1
- Cullin-4
- Rik1-associated factor 1
- WD repeat protein iqw1
- Cell division cycle protein cdt2
- RING-box protein pip1
- Uncharacterized ATP-dependent helicase C582.10c
- Mating-type switching protein swi10
Sequence:
MSGLPFHIPGYYYNSEKKRYFRIISSGQSTPSSNIYTKERLKRGKRFNNISKERTKGKGGNPVFNFSTYLFDRQFSQYPYSCNDDRDYLCAKNLKKINLRQLPVGTELQKIGWLREVNTIILTSKNGDILGCCLTPEDKSGVANEKYTSEGSIQDFSLSRIGLSNNPISSLVCNAMQIFWSTSPSLQNEGQFHISTYNQLLGESNNYRWGSLKLLKTPLCAESIGEMGFAVGGTSKIAIINREGKLTQSLQSKGDVFSLKYLGDNLVIAGCRNKSVLVYDLRTKKECVQRFYHGSSICSMQNLDFSQPKLLVSGLESKISLYDCRFLQSKKRPQSIMSYMGHSNLLERNLALMKNENGSIFSSAGDDYVLRFWKTDCSLPFKEMRVDDGKYLCRDGSWVKAMNGTGWVLPYGRGLLIYEP
Protein: Photosystem II reaction center protein L (PSII-L) (P0C417)
Organism: Oryza sativa subsp. indica (Rice)
Function: One of the components of the core complex of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. This subunit is found at the monomer-monomer interface and is required for correct PSII assembly and/or dimerization.
Subcellular location: Plastid, chloroplast thylakoid membrane {ECO:0000255|HAMAP-Rule:MF_01317}; Single-pass membrane protein {ECO:0000255|HAMAP-Rule:MF_01317}.
Interaction partners:
- Cytochrome b559 subunit beta
- Photosystem II reaction center protein J
- Photosystem II reaction center protein T
- Photosystem II CP47 reaction center protein
- 33 kDa subunit of oxygen evolving system of photosystem II
- Photosystem II reaction center protein I
- Cytochrome b6
- Cytochrome b559 subunit alpha
- Cytochrome b6-f complex subunit 4
- Photosystem II reaction center protein H
Sequence:
MTQSNPNEQNVELNRTSLYWGLLLIFVLAVLFSNYFFN
Protein: Ribosomal RNA-processing protein 9 (Q06506)
Organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Function: Involved in nucleolar processing of pre-18S ribosomal RNA. Required for efficient pre-rRNA cleavage at sites A0, A1 and A2, and biosynthesis of 18S rRNA.
Subcellular location: Nucleus, nucleolus {ECO:0000269|PubMed:14562095}.
Interaction partners:
- U3 small nucleolar RNA-associated protein 13
- U3 small nucleolar RNA-associated protein 18
- Small ribosomal subunit protein uS4A
- RNA cytidine acetyltransferase
- rRNA processing protein RCL1
- U3 small nucleolar RNA-associated protein MPP10
- Ribosomal RNA-processing protein 7
- Protein SOF1
- Periodic tryptophan protein 2
- 13 kDa ribonucleoprotein-associated protein
Sequence:
MSDVTQQKKRKRSKGEVNPSKPTVDEEITDPSSNEDEQLEVSDEEDALESEEEFEGENPADKRRRLAKQYLENLKSEANDILTDNRNAEEKDLNNLKERTIDEYNNFDAGDLDKDIIASRLKEDVAEQQGRVFRYFGDKLLISEAKQSFTRVGENNLTCISCFQPVLNKYTFEESSNGDKNKGRLFAYTVSKDLQLTKYDITDFSKRPKKLKYAKGGAKYIPTSKHEYENTTEGHYDEILTVAASPDGKYVVTGGRDRKLIVWSTESLSPVKVIPTKDRRGEVLSLAFRKNSDQLYASCADFKIRTYSINQFSQLEILYGHHDIVEDISALAMERCVTVGARDRTAMLWKIPDETRLTFRGGDEPQKLLRRWMKENAKEGEDGEVKYPDESEAPLFFCEGSIDVVSMVDDFHFITGSDNGNICLWSLAKKKPIFTERIAHGILPEPSFNDISGETDEELRKRQLQGKKLLQPFWITSLYAIPYSNVFISGSWSGSLKVWKISDNLRSFELLGELSGAKGVVTKIQVVESGKHGKEKFRILASIAKEHRLGRWIANVSGARNGIYSAVIDQTGF
Protein: Apolipoprotein E (Apo-E) (P18287)
Organism: Oryctolagus cuniculus (Rabbit)
Function: APOE is an apolipoprotein, a protein associating with lipid particles, that mainly functions in lipoprotein-mediated lipid transport between organs via the plasma and interstitial fluids. APOE is a core component of plasma lipoproteins and is involved in their production, conversion and clearance. Apolipoproteins are amphipathic molecules that interact both with lipids of the lipoprotein particle core and the aqueous environment of the plasma. As such, APOE associates with chylomicrons, chylomicron remnants, very low density lipoproteins (VLDL) and intermediate density lipoproteins (IDL) but shows a preferential binding to high-density lipoproteins (HDL). It also binds a wide range of cellular receptors including the LDL receptor/LDLR and the very low-density lipoprotein receptor/VLDLR that mediate the cellular uptake of the APOE-containing lipoprotein particles. Finally, APOE has also a heparin-binding activity and binds heparan-sulfate proteoglycans on the surface of cells, a property that supports the capture and the receptor-mediated uptake of APOE-containing lipoproteins by cells.
Subcellular location: Secreted {ECO:0000250|UniProtKB:P02649}. Secreted, extracellular space {ECO:0000250|UniProtKB:P02649}. Secreted, extracellular space, extracellular matrix {ECO:0000250|UniProtKB:P02649}. Extracellular vesicle {ECO:0000250|UniProtKB:P02649}. Endosome, multivesicular body {ECO:0000250|UniProtKB:P02649}. Note=In the plasma, APOE is associated with chylomicrons, chylomicrons remnants, VLDL, LDL and HDL lipoproteins. Lipid poor oligomeric APOE is associated with the extracellular matrix in a calcium- and heparan-sulfate proteoglycans-dependent manner. Lipidation induces the release from the extracellular matrix. Colocalizes with CD63 and PMEL at exosomes and in intraluminal vesicles within multivesicular endosomes. {ECO:0000250|UniProtKB:P02649}.
Interaction partners:
Sequence:
MKVWWAVLAAAILAGCRAQTEQEVEVPEQARWKAGQPWELALGRFWDYLRWVQSLSDQVQEELLSSQVTQELTMLMEETMKEVKAYKSELEEQLSPMAQEHRARLSKELQVAGALEADMEDVCNRLAQYRGEAQAMLGQSTEELARAFSSHLRKLRKRLLRDAEDLQKRMAVYGAGAREGAERGVSAVRERLGSRLERGRLRVATVGTLAGRPLRERAQAWGERLRGHLEEVGSRARDRLNEVREQVEEVRVKVEEQAPQMRLQAEAFQARLKSWFEPLVEDMQRQWAGLVEKLQAAMPSKAPAAAPIENQ
Protein: Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2 (G protein subunit beta-2) (Transducin beta chain 2) (P62879)
Organism: Homo sapiens (Human)
Function: Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.
Subcellular location: Cytoplasm, perinuclear region {ECO:0000269|PubMed:16498633}. Cell membrane {ECO:0000269|PubMed:28219978}.
Interaction partners:
- Guanine nucleotide-binding protein G
- Guanine nucleotide-binding protein G
- Guanine nucleotide-binding protein G
- Guanine nucleotide-binding protein G
- Guanine nucleotide-binding protein G
- Guanine nucleotide-binding protein G
- Guanine nucleotide-binding protein G
- Guanine nucleotide-binding protein G
- Guanine nucleotide-binding protein G
- Guanine nucleotide-binding protein G
Sequence:
MSELEQLRQEAEQLRNQIRDARKACGDSTLTQITAGLDPVGRIQMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIITSSGDTTCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYAFTTGSDDATCRLFDLRADQELLMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNIWDAMKGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN
Protein: RH70372p (Q8MQL9)
Organism: Drosophila melanogaster (Fruit fly)
Interaction partners:
Sequence:
MEALVNYSSEDDQEDAGFQIRAPQQQQQLRHLPHAKSPKTTTDSLLKQKNNNNYGSGNSPRGKEREREREREREKTKPMSQQQSHRSSSRGRIDEEPKPSSRHRQERDKDRERDRDRERDRDKDKKRSDSERSRDKGRDKNHSKGDHRHHRTKDGESHRERERDRDRERERDRDKDRDRRRSEKSSRHHSGKERHHHHHNNSSSAAAAAVSAASVRRSHDERSRRRRDSRSGSRTPTGTPPSRRRHQSRQSRKYRERDSSSRSRSPKEEQATTLRGGAVAGSHMLLAKSGGGAGSTATNATAAARVAAAALVAANATAAAMAAGSSGGGGGGLLPTPNYAPKIPSLMSLELSTPAAAAPVAEPIQLPSYYNPSIINANRYAEQQQKRKLLWGSKKSENSANKWGNAHFSQDSDGKVASKFMRLMGIKNAGTSGNDDGKGGQAESTNGSAAGEGNRAVRGAAPSGAAGGTKVPTDVQQRQRMFSNMEQQYEMARAATHTMRGVGLGFGSQPRTF
Protein: Mth938 domain-containing protein (LI2) (Q8R0P4)
Organism: Mus musculus (Mouse)
Function: May play a role in preadipocyte differentiation and adipogenesis.
Subcellular location: Cytoplasm {ECO:0000269|PubMed:21622130}. Note=Diffuse distribution with some highly concentrated spots around the nucleus.
Interaction partners:
- Leucine-rich repeat serine/threonine-protein kinase 2
- Ras-related protein Rab-10
- Ras-related protein Rab-7L1
Sequence:
MASPKIASLSWGQMKVQGSTLTYKDCKVWPGGSRAWDWRETGTEHSPGVQPADVKEVAEKGVQTLVIGRGMSEALKVPPSTVEYLEKQGIDVRVLQTEQAVKEYNALVAQGVRVGGVFHSTC
Protein: Vestigial-like 4 like (Q1RLU0)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Interaction partners:
- TEA domain family member 3 b.
- Transcriptional enhancer factor TEF-5
- TEA domain family member 1b.
- Ankyrin repeat and BTB/POZ domain-containing protein 2
Sequence:
MAVTNFHYITRMSSGFKVYILEGQPNLRSEDRFRHMTSDRVRMRPAHPMKRKHSSDRGRTLEERRERALSKCVANSARRSSGFSIPESPTSTWSPTASPTHLIPSPVFSSPVMDEPLALIKKPRPEPEKTESQNKATTQIQMRPSVITCVSSASRSTKQDCCNHSTAVSKHSYDHVEEHFQRSLGINYHRATSISVSVDDHFAKALGDKWLQLKASSSSCHSSSSSSSSSPPSSPTFIHSPGYSPKRARKDSSSPTTTTPNFWSDK
Protein: Growth/differentiation factor 7 (GDF-7) (Q7Z4P5)
Organism: Homo sapiens (Human)
Function: May play an active role in the motor area of the primate neocortex.
Subcellular location: Secreted {ECO:0000250}.
Interaction partners:
- Bone morphogenetic protein receptor type-1B
- Bone morphogenetic protein receptor type-1A
- Chordin
- Activin receptor type-2A
- Bone morphogenetic protein receptor type-2
- Activin receptor type-2B
- Noggin
- Bone morphogenetic protein 7
- Neuroblastoma suppressor of tumorigenicity 1
- Glycodelin
Sequence:
MDLSAAAALCLWLLSACRPRDGLEAAAVLRAAGAGPVRSPGGGGGGGGGGRTLAQAAGAAAVPAAAVPRARAARRAAGSGFRNGSVVPHHFMMSLYRSLAGRAPAGAAAVSASGHGRADTITGFTDQATQDESAAETGQSFLFDVSSLNDADEVVGAELRVLRRGSPESGPGSWTSPPLLLLSTCPGAARAPRLLYSRAAEPLVGQRWEAFDVADAMRRHRREPRPPRAFCLLLRAVAGPVPSPLALRRLGFGWPGGGGSAAEERAVLVVSSRTQRKESLFREIRAQARALGAALASEPLPDPGTGTASPRAVIGGRRRRRTALAGTRTAQGSGGGAGRGHGRRGRSRCSRKPLHVDFKELGWDDWIIAPLDYEAYHCEGLCDFPLRSHLEPTNHAIIQTLLNSMAPDAAPASCCVPARLSPISILYIDAANNVVYKQYEDMVVEACGCR
Protein: Solute carrier family 22 member 12 (Urate anion exchanger 1) (URAT1) (Urate:anion antiporter SLC22A12) (Q3ZAV1)
Organism: Rattus norvegicus (Rat)
Function: Electroneutral antiporter that translocates urate across the apical membrane of proximal tubular cells in exchange for monovalent organic or inorganic anions. Involved in renal reabsorption of urate and helps maintaining blood levels of uric acid. Mediates urate uptake by an exchange with organic anions such as (S)-lactate and nicotinate, and inorganic anion Cl(-). Other inorganic anions such as Br(-), I(-) and NO3(-) may also act as counteranions that exchange for urate (By similarity). Also mediates orotate tubular uptake coupled with nicotinate efflux and to a lesser extent with lactate efflux, therefore displaying a potential role in orotate renal reabsorption. Orotate transport is Cl(-)-dependent (By similarity).
Subcellular location: Apical cell membrane {ECO:0000269|PubMed:21074513}; Multi-pass membrane protein {ECO:0000255}.
Interaction partners:
- Solute carrier family 2 member 9
- Sodium-dependent phosphate transport protein 1
- Uricase
- Broad substrate specificity ATP-binding cassette transporter ABCG2
- Solute carrier family 17 member 3
Sequence:
MAFPELLDRVGGRGRFQLLQAVALVTPILWVTTQNMLENFSAAVPHHRCWVPLLDNSTSQASIPGDFGRDVLLAVSIPPGPDQRPHQCLRFRQPQWQLIESNTTATNWSDADTEPCEDGWVYDHSTFRSTIVTTWDLVCDSQALRPMAQSIFLAGILVGAAVCGHASDRFGRRRVLTWSYLLVSVSGTIAALMPTFPLYCLFRFLVASAVAGVMMNTASLLMEWTSAQAGPLMMTLNALGFSFGQVLTGSVAYGVRSWRMLQLAVSAPFFLFFVYSWWLPESARWLITVGRLDQSLRELQRVAAVNRRKAEADTLTVEVLRSAMQEEPNGNQAGARLGTLLHTPGLRLRTFISMLCWFAFGFTFYGLALDLQALGSNIFLLQALIGIVDLPVKMGSLLLLSRLGRRLCQASSLVLPGLCILANILVPREMGILRSSLAVLGLGSLGAAFTCVTIFSSELFPTVIRMTAVGLGQVAARGGAMLGPLVRLLGVYGSWLPLLVYGVVPVLSGLAALLLPETKNLPLPDTIQDIQKQSVKKVTHDIAGGSVLKSARL
Protein: ABC transporter F family member 2 (ABC transporter ABCF.2) (AtABCF2) (GCN20-type ATP-binding cassette protein GCN2) (Q9FIB4)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Interaction partners:
- 50S ribosomal protein L33
- ABC transporter E family member 3
- Large ribosomal subunit protein bL28c
- Translation elongation factor EF1B/ribosomal protein S6 family protein
- Large ribosomal subunit protein bL31c
- Large ribosomal subunit protein bL20c
- 50S ribosomal protein L20
- AT5g15220/F8M21_110
- Large ribosomal subunit protein bL27c
- Large ribosomal subunit protein bL21c
Sequence:
MVLTTNLYSLNLRSTFFFTNTITCPTLFTFKLSSVSNPRRVFPNIRAHVSAASSNSELESLLSTDRKLISKQSNNGASSISSGVRLENISKSYEGITVLKDVTWEVKKGEKVGLIGVNGAGKTTQLRIITGQEEPDSGNVIWAKPNLKVAFLSQEFEVSMGKTVKEEFMCTFKEEMEIARKLENLQKAIEEAVDDLELMGKLLDEFDLLQRRAQEVDLDSIHAKISKLMSELGFVSEDADRLVASFSSGWQMRMSLGKILLQNPDLLLLDEPTNHLDLDTIEWLEGYLIKQDVPMVIISHDRAFLDQLCTKIVETEMGVSRTFDGNYSQYVISKAELVEAQYAAWEKQQKEIEATKDLISRLSAGANSGRASSAEKKLEKLQEEELIEKPFQRKQMKIRFPECGLSGRSVVTVKNLVFGFDDKMLFNKANLAIERGEKVAIIGPNGCGKSTLLKLIMGLEKPMRGEVILGEHNVLPNYFEQNQAEAQDLDKTVIETVVEAAVDWRIDDIKALLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAINEYKGTVITVSHDRYFIKQIVNRVIEVRDGGLMDYAGDYNYFLEKNVEARARELEREAELEEKAPKVKAKSKMSKAEREARKKQKMKAFQASKKKSKSSKNAKRWN
Protein: ATP synthase subunit a (B2KIT2)
Organism: Candida parapsilosis (Yeast)
Subcellular location: Mitochondrion inner membrane {ECO:0000256|ARBA:ARBA00004448, ECO:0000256|RuleBase:RU004450}; Multi-pass membrane protein {ECO:0000256|ARBA:ARBA00004448, ECO:0000256|RuleBase:RU004450}.
Interaction partners:
Sequence:
MFYSPLDQFELKPLLLITDNLTFSITNYTLYLIIVSLIIIFYSSIIRHNYLGSSRWGVSVIAIYDTILNLVNGQIGRKGGYYFPLIFTIFNFILIANLISMIPYSFAISAQLVAVVSFSLALWIGNVVLGLYLHGWGFFALFVPSGTPLALVPVLVLIEALSYASRAISLGLRLGANILSGHLLMLILGSLIISLMSSSFLGFVSGIIPILAVVAITILEFGIAIIQAYVFSILLSGYIKDSVELH
Protein: Monogalactosyldiacylglycerol synthase 1, chloroplastic (AtMGD1) (EC 2.4.1.46) (MGDG synthase type A) (Protein EMBRYO DEFECTIVE 2797) (O81770)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Involved in the synthesis of the major structural component of photosynthetic membranes. Required for proper thylakoid membrane biogenesis. Does not discriminate between prokaryotic (18:1/16:0) or eukaryotic (18:2/18:2) 1,2-diacylglycerol species, but operates with some preference for the prokaryotic one. Is responsible for most galactolipid synthesis in chloroplasts. Required for the formation of thylakoid membranes and functional photosynthetic electron transport during cotyledons greening in young seedlings. May link galactolipid synthesis with the coordinated transcriptional regulation of chloroplasts and other organelles during cotyledon greening.
Subcellular location: Plastid, chloroplast inner membrane {ECO:0000305|PubMed:11171188, ECO:0000305|PubMed:11553816}.
Interaction partners:
- Digalactosyldiacylglycerol synthase 1, chloroplastic
- Digalactosyldiacylglycerol synthase 2, chloroplastic
- Sulfoquinovosyl transferase SQD2
- Galactolipid galactosyltransferase SFR2, chloroplastic
- Phosphatidate phosphatase PAH1
- Phosphatidate phosphatase PAH2
- Phospholipid:diacylglycerol acyltransferase 1
- Diacylglycerol O-acyltransferase 3
- Putative phospholipid:diacylglycerol acyltransferase 2
- Diacylglycerol O-acyltransferase 1
Sequence:
MQNPSTVTQESAAPVFDFFPRLRGLTSRNRSPCSNSDGYALSSSNALYFNGFRTLPSRRMGKTLASLSFNTKSSAGSSLRRFISDFNSFIRFHCDKVVPESFASVGGVGLSSDENGIRENGTGGVLGEEGLPLNGVEADRPKKVLILMSDTGGGHRASAEAIRAAFNQEFGDEYQVFITDLWTDHTPWPFNQLPRSYNFLVKHGTLWKMTYYGTSPRIVHQSNFAATSTFIAREIAQGLMKYQPDIIISVHPLMQHVPLRVLRSKGLLKKIVFTTVITDLSTCHPTWFHKLVTRCYCPSTEVAKRAQKAGLETSQIKVYGLPVRPSFVKPVRPKVELRRELGMDENLPAVLLMGGGEGMGPIEATARALADALYDKNLGEAVGQVLIICGRNKKLQSKLSSLDWKIPVQVKGFITKMEECMGACDCIITKAGPGTIAEAMIRGLPIILNGYIAGQEAGNVPYVVENGCGKFSKSPKEISKIVADWFGPASKELEIMSQNALRLAKPEAVFKIVHDMHELVRKKNSLPQLSCTA
Protein: Sperm protamine P1 (Cysteine-rich protamine) (P02319)
Organism: Mus musculus (Mouse)
Function: Protamines substitute for histones in the chromatin of sperm during the haploid phase of spermatogenesis. They compact sperm DNA into a highly condensed, stable and inactive complex.
Subcellular location: Nucleus. Chromosome.
Interaction partners:
- Nuclear transition protein 2
- Spermatid nuclear transition protein 1
- Protamine-2
Sequence:
MARYRCCRSKSRSRCRRRRRRCRRRRRRCCRRRRRRCCRRRRSYTIRCKKY
Protein: Transcription initiation factor TFIID subunit 2 (Transcription initiation factor TFIID 150 kDa subunit) (TAF(II)150) (TAFII-150) (TAFII150) (Q24325)
Organism: Drosophila melanogaster (Fruit fly)
Function: TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors. An essential subunit binds to core promoter DNA.
Subcellular location: Nucleus.
Interaction partners:
- Transcription initiation factor TFIID subunit 7
- Transcription initiation factor TFIID subunit 6
- Transcription initiation factor TFIID subunit 9
- TATA-box-binding protein
- Transcription initiation factor TFIID subunit 12
- Transcription initiation factor TFIID subunit 11
- Transcription initiation factor TFIID subunit 1
- Transcription initiation factor TFIID subunit 5
- TBP-associated factor 3
- Transcription initiation factor TFIID subunit 8
Sequence:
METQPEVPEVPLRPFKLAHQVVSLTGISFERRSIIGVVELTIVPNSENLRLIRLNAKQLRIYSVVLNDVCQADFTYFDPFQNICYKEHKSRALEVYSKHHLTAAQYTDPDVNNGELLIQVPPEGYSMIQEGQGLRIRIEFSLENPKCGVHFVIPPASTDEETQMNSSHMFTNCYENSSRLWFPCVDSFADPCTWRLEFTVDKNMTAVSCGELLEVIMTPDLRKKTFHYSVSTPVCAPNIALAVGQFEIYVDPHMHEVTHFCLPGLLPLLKNTVRYLHEAFEFYEETLSTRYPFSCYKQVFVDELDTDISAYATMSIASVNLLHSIAIIDQTYISRTFMSRAVAEQFFGCFITSHHWSDTWLAKGIAEYLCGLYSRKCFGNNEYRAWVQSELARVVRYEEQYGGIILDCSQPPAPLPVSGTNQSAASSKQQEIVHYFPIKSLHTVSPKYVEAMRRKAHFVIRMLENRIGQELLIQVFNKQLALASSAATTKIGAGLWSQLLISTNIFIKAIFTVTGKDMSVFMDQWVRTGGHAKFSLTSVFNRKRNTIELEIRQDYVNQRGIRKYNGPLMVQLQELDGTFKHTLQIESTLVKSDITCHSKSRRNKKKKIPLCTGEEVDMDLSAMDDSPVLWIRLDPEMILLRDLIIEQPDFQWQYQLRHERDVTAQFQAIQALQKYPTNATRLALTDTIESERCFYQVRCEAAHSLTKVANQMVASWSGPPAMLNIFRKFFGSFSAPHIIKLNNFSNFQLYFLQKAIPVAMAGLRTSHGICPPEVMRFLFDLFKYNENSRNHYTDAYYRAALVEALGETLTPVVSVAIHGTQITTDSLSTDAKLVLDEVTRLLNMEKHLPSYKYMVSVSCLKVIRKLQKFGHLPSLPHIYRSYAEYGIYLDLRIAAMECLVDFVKVDGRSEDLEHLITLLETDPDPAARHALAQLLIDNPPFTRESRSRLDKPNLVDRLWFSINRLPYDTKLRCDIVDLYYALYGTKRPNCLQAGENQSFYKDLMKDNNSSVGSVTGSFKKTSDSKSHLPTPTNTLDNEPQERQKPAMVTIKRTATEAFEVGDEIIKLERSEEITVLDEPVNVQAYDSETKVNALQADEEARDTHQAAKRLKNEMYAEDDNSSTMLDVGDSTRYESSHEEGKLKSGDGGLKKKKKKEKKKHKHKHKHRHSKDKDKDKDKERKDKDKRDPHISRLQARETATPDTLSSEDSSNSNSLPPMNLN