wanglab/gogpt-training-data huggingface dataset:
Protein: Neurotensin receptor type 2 (NT-R-2) (NTR2) (Levocabastine-sensitive neurotensin receptor) (O95665)
Organism: Homo sapiens (Human)
Function: Receptor for the tridecapeptide neurotensin. It is associated with G proteins that activate a phosphatidylinositol-calcium second messenger system.
Subcellular location: Cell membrane; Multi-pass membrane protein.
Interaction partners:
- Neurotensin/neuromedin N
- ATP-dependent RNA helicase DHX15
- Tuftelin-interacting protein 11
- Neurotensin receptor type 1
- Neuromedin-U
- BDNF/NT-3 growth factors receptor
Sequence:
METSSPRPPRPSSNPGLSLDARLGVDTRLWAKVLFTALYALIWALGAAGNALSAHVVLKARAGRAGRLRHHVLSLALAGLLLLLVGVPVELYSFVWFHYPWVFGDLGCRGYYFVHELCAYATVLSVAGLSAERCLAVCQPLRARSLLTPRRTRWLVALSWAASLGLALPMAVIMGQKHELETADGEPEPASRVCTVLVSRTALQVFIQVNVLVSFVLPLALTAFLNGVTVSHLLALCSQVPSTSTPGSSTPSRLELLSEEGLLSFIVWKKTFIQGGQVSLVRHKDVRRIRSLQRSVQVLRAIVVMYVICWLPYHARRLMYCYVPDDAWTDPLYNFYHYFYMVTNTLFYVSSAVTPLLYNAVSSSFRKLFLEAVSSLCGEHHPMKRLPPKPQSPTLMDTASGFGDPPETRT
Protein: Neural cell adhesion molecule 2 (N-CAM-2) (NCAM-2) (O15394)
Organism: Homo sapiens (Human)
Function: May play important roles in selective fasciculation and zone-to-zone projection of the primary olfactory axons.
Subcellular location: Cell membrane; Single-pass type I membrane protein.
Interaction partners:
- Major prion protein
- Neural cell adhesion molecule L1
- Neural cell adhesion molecule 1
Sequence:
MSLLLSFYLLGLLVSSGQALLQVTISLSKVELSVGESKFFTCTAIGEPESIDWYNPQGEKIISTQRVVVQKEGVRSRLTIYNANIEDAGIYRCQATDAKGQTQEATVVLEIYQKLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLANNNLQILNINKSDEGIYRCEGRVEARGEIDFRDIIVIVNVPPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYILKGSNTELTVRNIINSDGGPYVCRATNKAGEDEKQAFLQVFVQPHIIQLKNETTYENGQVTLVCDAEGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSSLHIKDVKLSDSGRYDCEAASRIGGHQKSMYLDIEYAPKFISNQTIYYSWEGNPINISCDVKSNPPASIHWRRDKLVLPAKNTTNLKTYSTGRKMILEIAPTSDNDFGRYNCTATNHIGTRFQEYILALADVPSSPYGVKIIELSQTTAKVSFNKPDSHGGVPIHHYQVDVKEVASEIWKIVRSHGVQTMVVLNNLEPNTTYEIRVAAVNGKGQGDYSKIEIFQTLPVREPSPPSIHGQPSSGKSFKLSITKQDDGGAPILEYIVKYRSKDKEDQWLEKKVQGNKDHIILEHLQWTMGYEVQITAANRLGYSEPTVYEFSMPPKPNIIKDTLFNGLGLGAVIGLGVAALLLILVVTDVSCFFIRQCGLLMCITRRMCGKKSGSSGKSKELEEGKAAYLKDGSKEPIVEMRTEDERVTNHEDGSPVNEPNETTPLTEPEKLPLKEEDGKEALNPETIEIKVSNDIIQSKEDDSKA
Protein: Candida glabrata strain CBS138 chromosome A complete sequence (Q6FYB0)
Organism: Candida glabrata (strain ATCC 2001 / BCRC 20586 / JCM 3761 / NBRC 0622 / NRRL Y-65 / CBS 138) (Yeast) (Nakaseomyces glabratus)
Interaction partners:
- Large ribosomal subunit protein uL23
- L23
- 60S acidic ribosomal protein P0
- Candida glabrata strain CBS138 chromosome M complete sequence
- Ribosomal protein L15
- Large ribosomal subunit protein uL2
- Candida glabrata strain CBS138 chromosome M complete sequence
- 60S ribosomal protein L28
- Large ribosomal subunit protein eL24
- Candida glabrata strain CBS138 chromosome M complete sequence
Sequence:
MKYLAAYLLLTQGGNESPAAADIKKVIESVGIEADEARINELLSALEGKSLDELIAEGQQKFASVPVGGAAAGGASAAAGGAAAGEAAEEKEEEAAEESDDDMGFGLFD
Protein: cyclic-guanylate-specific phosphodiesterase (EC 3.1.4.52) (Q9HXH7)
Organism: Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Subcellular location: Cell membrane {ECO:0000256|ARBA:ARBA00004651}; Multi-pass membrane protein {ECO:0000256|ARBA:ARBA00004651}.
Interaction partners:
- diguanylate cyclase
- Diguanylate cyclase
- Diguanylate cyclase
- GGDEF domain-containing protein
- Diguanylate cyclase TpbB
- diguanylate cyclase
- diguanylate cyclase
- diguanylate cyclase
- GGDEF domain-containing protein
- Sensor domain-containing diguanylate cyclase
Sequence:
MPIPVKRARRKALRLSLSVLVGVMPIVLGLLILYWQAERSLQETSEQAAGNAVRQFERMLDNAALAARKVMPVAGRPCPEAELALREQVAIMPFVRSVNLTRDNTIYCTSLFGGFDEPVRIENYVDGRLLLMPGNQVTPDAALLVLRDFDGKRGVLAAIDGRYLSYVLDLVDRRSRQVLVVGPNWLDAEGRTHRDAPPTYEVAAVSLASQRYPLRVLSGFPEGEEWRSIRSQNPAMFGLLLFFGLLAGTLCYWLSRRVASPSSELRRALEANEFIPYYQPLSPGQGGRWIGVEVLMRWRHPREGLIRPDLFIPFAERSGLIVPMTRALMRQVAEDLGGHAGKLEPGFHIGFNISATHCHELALVDDCRELLAAFPPGHITLVLELTERELIESSEVTDRLFDELHALGVKIAIDDFGTGHSSLAYLRKFQVDCLKIDQSFVARIGIDTLSGHILDSIVELSAKLDLDIVAEGVETPEQRDYLAARGVDYLQGYLIGRPMPLESLLSSLTVQEGQGASVVALPADRG
Protein: Zinc finger and BTB domain-containing protein 16 (Promyelocytic leukemia zinc finger protein) (Zinc finger protein 145) (Zinc finger protein PLZF) (Q05516)
Organism: Homo sapiens (Human)
Function: Acts as a transcriptional repressor. Transcriptional repression may be mediated through recruitment of histone deacetylases to target promoters. May play a role in myeloid maturation and in the development and/or maintenance of other differentiated tissues. Probable substrate-recognition component of an E3 ubiquitin-protein ligase complex which mediates the ubiquitination and subsequent proteasomal degradation of target proteins.
Subcellular location: Nucleus {ECO:0000269|PubMed:24359566}. Nucleus, nuclear body {ECO:0000269|PubMed:24359566}.
Interaction partners:
- Retinoic acid receptor alpha
- Nuclear receptor corepressor 2
- Nuclear receptor corepressor 1
- Histone deacetylase 1
- Polycomb complex protein BMI-1
- Histone deacetylase 4
- Cullin-3
- Protein CBFA2T1
- Polycomb complex protein BMI-1
- Histone-lysine N-methyltransferase EZH2
Sequence:
MDLTKMGMIQLQNPSHPTGLLCKANQMRLAGTLCDVVIMVDSQEFHAHRTVLACTSKMFEILFHRNSQHYTLDFLSPKTFQQILEYAYTATLQAKAEDLDDLLYAAEILEIEYLEEQCLKMLETIQASDDNDTEATMADGGAEEEEDRKARYLKNIFISKHSSEESGYASVAGQSLPGPMVDQSPSVSTSFGLSAMSPTKAAVDSLMTIGQSLLQGTLQPPAGPEEPTLAGGGRHPGVAEVKTEMMQVDEVPSQDSPGAAESSISGGMGDKVEERGKEGPGTPTRSSVITSARELHYGREESAEQVPPPAEAGQAPTGRPEHPAPPPEKHLGIYSVLPNHKADAVLSMPSSVTSGLHVQPALAVSMDFSTYGGLLPQGFIQRELFSKLGELAVGMKSESRTIGEQCSVCGVELPDNEAVEQHRKLHSGMKTYGCELCGKRFLDSLRLRMHLLAHSAGAKAFVCDQCGAQFSKEDALETHRQTHTGTDMAVFCLLCGKRFQAQSALQQHMEVHAGVRSYICSECNRTFPSHTALKRHLRSHTGDHPYECEFCGSCFRDESTLKSHKRIHTGEKPYECNGCGKKFSLKHQLETHYRVHTGEKPFECKLCHQRSRDYSAMIKHLRTHNGASPYQCTICTEYCPSLSSMQKHMKGHKPEEIPPDWRIEKTYLYLCYV
Protein: CD59 glycoprotein precursor (CD59 molecule (CD59 blood group)) (E7F2M5)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Subcellular location: Cell membrane {ECO:0000256|ARBA:ARBA00004609}; Lipid-anchor, GPI-anchor {ECO:0000256|ARBA:ARBA00004609}.
Interaction partners:
- Complement component C9
- Cocaine-and amphetamine-regulated transcript protein-like 1
- CD59B glycoprotein
- Protein transport protein Sec24C
Sequence:
MKASVGVCVVFVLALLGLGSAIKCYNCKDYTGACSKIKDCYYDDACLSVYERGGDTYRQCIKYSECDYSTVGVKFPKLSSFKFSCCTSDLCNSAPLSVSSRSVVAILLPLALFWWGVF
Protein: Glutaredoxin-related protein 5, mitochondrial (Monothiol glutaredoxin-5) (Q6PBM1)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Function: Monothiol glutaredoxin involved in mitochondrial iron-sulfur (Fe/S) cluster transfer. Receives iron-sulfur clusters from scaffold protein ISCU and mediates their transfer to apoproteins, to the 4Fe/FS cluster biosynthesis machinery, or export from mitochondrion. Required for normal hemoglobin biosynthesis.
Subcellular location: Mitochondrion {ECO:0000269|PubMed:16110529}.
Interaction partners:
- BolA family member 1
- Iron-sulfur clusters transporter ABCB7, mitochondrial
- Cysteine desulfurase
- Iron-sulfur cluster assembly 1 homolog, mitochondrial
- Iron-sulfur cluster assembly 2.
- 5-aminolevulinate synthase, erythroid-specific, mitochondrial
- Iron-sulfur cluster assembly factor IBA57, mitochondrial
- Si:ch211-191d15.2
- Ferrochelatase
- Frataxin.
Sequence:
MNSVFRSTARCLRSATWQYKTAHKNGELSVGRARLMCSSAGQKNLEEMVKKDKVVVFMKGTPAQPMCGFSNAVVQILRMHGVDNYASYNVLDDQDVRQGIKTFSNWPTIPQVFFNGEFVGGCDILLQMHQSGDLVEELQKLGIRSALLDQEKESK
Protein: HLA class II histocompatibility antigen DP beta chain (MHC class II antigen) (A0A1C3PI11)
Organism: Homo sapiens (Human)
Subcellular location: Endosome membrane {ECO:0000256|ARBA:ARBA00004530}; Single-pass type I membrane protein {ECO:0000256|ARBA:ARBA00004530}. Lysosome membrane {ECO:0000256|ARBA:ARBA00004352}; Single-pass type I membrane protein {ECO:0000256|ARBA:ARBA00004352}.
Interaction partners:
Sequence:
MMVLQVSAAPRTVALTALLMVLLTSVVQGRATPENYVHQLRQECYAFNGTQRFLERYIYNREEFVRFDSDVGEFRAVTELGRPDEDYWNSQKDILEEERAVPDRMCRHNYELDEAVTLQRRVQPRVNVSPSKKGPLQHHNLLVCHVTDFYPGSIQVRWFLNGQEETAGVVSTNLIRNGDWTFQILVMLEMTPQQGDVYTCQVEHTSLDSPVTVEWKAQSDSARSKTLTGAGGFVLGLIICGVGIFMHRRSKKVQRGSA
Protein: TNF receptor associated protein 1 (TNF receptor-associated protein 1, isoform CRA_b) (I3L0K7)
Organism: Homo sapiens (Human)
Interaction partners:
Sequence:
MVADRVEVYSRSAAPGSLGYQWLSDGSGVFEIAEASGVRTGTKIIIHLKSDCKEFSSEARVRDVVTKYSNFVSFPLYLNGRRMNTLQAIWMMDPKDVREWQHEEFYRYVAQAHDKPRYTLHYKTDAPLNIRSIFYVPDMKPSMFDVSRELGSSVALYSRKVLIQTKATDILPKWLRFIRGVVDSEDIPLNLSRELLQESALIRKLRDVLQQRLIKFFIDQSKKDAEKYAKFFEDYGLFMREGIVTATEQEVKEDIAKLLRYESSALPSGQLTSLSEYASRMRAGTRNIYYLCAPNRHLAEHSPYYEAMKKKDTEVLFCFEQFDELTLLHLREFDKKKLISVETDIVVDHYKEEKFEDRSPAAECLSEKETEELMAWMRNVLGSRVTNVKVTLRLDTHPAMVTVLEMGAARHFLRMQQLAKTQEERAQLLQPTLEINPRHALIKKLNQLRASEPGLAQLLVDQIYENAMIAAGLVDDPRAMVGRLNELLVKALERH
Protein: Pro-neuropeptide Y [Cleaved into: Neuropeptide Y (Neuropeptide tyrosine) (NPY); C-flanking peptide of NPY (CPON)] (P07808)
Organism: Rattus norvegicus (Rat)
Function: NPY is implicated in the control of feeding and in secretion of gonadotrophin-release hormone.
Subcellular location: Secreted. Cytoplasmic vesicle, secretory vesicle, neuronal dense core vesicle {ECO:0000269|PubMed:29166604, ECO:0000269|PubMed:30021165}.
Interaction partners:
- Neuropeptide Y receptor type 2
- Neuropeptide Y receptor type 1
- Neuropeptide Y receptor type 5
- Pancreatic polypeptide prohormone
- Leptin
- Appetite-regulating hormone
- Peptide YY
- Galanin peptides
- Neuropeptide Y receptor type 4
- Agouti-related protein
Sequence:
MMLGNKRMGLCGLTLALSLLVCLGILAEGYPSKPDNPGEDAPAEDMARYYSALRHYINLITRQRYGKRSSPETLISDLLMRESTENAPRTRLEDPSMW
Protein: Ensconsin (Epithelial microtubule-associated protein of 115 kDa) (E-MAP-115) (Microtubule-associated protein 7) (MAP-7) (Q14244)
Organism: Homo sapiens (Human)
Function: Microtubule-stabilizing protein that may play an important role during reorganization of microtubules during polarization and differentiation of epithelial cells. Associates with microtubules in a dynamic manner. May play a role in the formation of intercellular contacts. Colocalization with TRPV4 results in the redistribution of TRPV4 toward the membrane and may link cytoskeletal microfilaments.
Subcellular location: Cytoplasm, perinuclear region. Basolateral cell membrane. Cytoplasm, cytoskeleton. Note=Colocalized on microtubules. An intracellular redistribution is triggered during induction of keratinocyte terminal differentiation from microtubules with a perinuclear localization to cortical microtubules organized in spike-like bundles facing intercellular contacts.
Interaction partners:
- Tubulin alpha-1B chain
- Tubulin beta-2B chain
- Transient receptor potential cation channel subfamily V member 4
- Small ribosomal subunit protein uS11
Sequence:
MAELGAGGDGHRGGDGAVRSETAPDSYKVQDKKNASSRPASAISGQNNNHSGNKPDPPPVLRVDDRQRLARERREEREKQLAAREIVWLEREERARQHYEKHLEERKKRLEEQRQKEERRRAAVEEKRRQRLEEDKERHEAVVRRTMERSQKPKQKHNRWSWGGSLHGSPSIHSADPDRRSVSTMNLSKYVDPVISKRLSSSSATLLNSPDRARRLQLSPWESSVVNRLLTPTHSFLARSKSTAALSGEAASCSPIIMPYKAAHSRNSMDRPKLFVTPPEGSSRRRIIHGTASYKKERERENVLFLTSGTRRAVSPSNPKARQPARSRLWLPSKSLPHLPGTPRPTSSLPPGSVKAAPAQVRPPSPGNIRPVKREVKVEPEKKDPEKEPQKVANEPSLKGRAPLVKVEEATVEERTPAEPEVGPAAPAMAPAPASAPAPASAPAPAPVPTPAMVSAPSSTVNASASVKTSAGTTDPEEATRLLAEKRRLAREQREKEERERREQEELERQKREELAQRVAEERTTRREEESRRLEAEQAREKEEQLQRQAEERALREREEAERAQRQKEEEARVREEAERVRQEREKHFQREEQERLERKKRLEEIMKRTRRTEATDKKTSDQRNGDIAKGALTGGTEVSALPCTTNAPGNGKPVGSPHVVTSHQSKVTVESTPDLEKQPNENGVSVQNENFEEIINLPIGSKPSRLDVTNSESPEIPLNPILAFDDEGTLGPLPQVDGVQTQQTAEVI
Protein: DOMON domain-containing protein FRRS1L (Ferric-chelate reductase 1-like protein) (D3ZE85)
Organism: Rattus norvegicus (Rat)
Function: Important modulator of glutamate signaling pathway.
Subcellular location: Cell membrane {ECO:0000305|PubMed:22632720}. Synapse {ECO:0000305|PubMed:22632720}.
Interaction partners:
- Large ribosomal subunit protein uL23m
- Large ribosomal subunit protein bL19m
- Large ribosomal subunit protein uL4m
- Large ribosomal subunit protein uL29m
- Large ribosomal subunit protein mL46
- Large ribosomal subunit protein uL3m
- Large ribosomal subunit protein uL22m
- Large ribosomal subunit protein bL27m
- Large ribosomal subunit protein uL16m
- Mitochondrial ribosomal protein S35
Sequence:
MAGQSLRRSAWVPLLLRLLLAGIAACEASPADDGAGPGGRGPRGRARGDAGADEAVPRHDSSYGTFAGEFYDLRYLSEEGYPFPTAPPVDPFAKIKVEDCGRTKGCFRYGKPGCNAETCDYFLSYRMIGADVEFELSADTDGWVAVGFSSDKKMGGDDVMACVHDDNGRVRIQHFYNVGQWAKEVQRNPARDEEGVFENNRVTCRFKRPVNVPRDETIVDLHLSWYYLFAWGPAIQGSITRHDIDSPPASERVVSIYKYEDIFMPSAAYQTFSSPFCLLLIVALTFYLLMGTP
Protein: START domain-containing protein (Q385D0)
Organism: Trypanosoma brucei brucei (strain 927/4 GUTat10.1)
Interaction partners:
Sequence:
MPSDTTKEEEETVVYKTPFPLTGEEVSNAGRRYRLPAKNDFLAFRNYADSLEGYSLRCNRPNDTIVWSKKVKGESLNVVKVFSVYPGVDPQTMYDMLQDGLYRVVWDTYRIEAFCIVQLSPNTDIGYYAAKSPATGVTNRDFVNQRAWHSAGNGEFIIFNTSVPHRDVPTNYLKANKISSDSVVRGFSKITGYLIRPWEDKGTKGCCLTYVTQCDVGGWIPTMVMNYVTTKASPNTVKTVRGAVAGFTEWVPKQSDYQRTWTSDPDPFDVPSLENITIQFAKEKWAGESGSS
Protein: Nuclear receptor corepressor 2 (C9JE98)
Organism: Homo sapiens (Human)
Interaction partners:
Sequence:
MSGSTQPVAQTWRATEPRYPPHSLSYPVQIARTHTDVGLLEYQHHSRDYASHLSPGSIIQPQRRRPSLLSEFQPGNERSQELHLRPESHSYLPELGKSEMEFIESKRPRLELLPDPLLRPSPLLATGQPAGSEDLTKDRSLTGKLEPVSPPSPPHTDPELELVPPRLSKEELIQNMDRVDREITMVEQQISKLKKKQQQLEEEAAKPPEPEKPVSPPPIESKHRSLVQIIYDENRKKAEAAHRILEGLGPQVELPLYNQPSDTRQYHENIKINQAMRKKLILYFKRRNHARKQWEQKFCQRYDQLMEAWEKKVERIENNPRRRAKESKVREYYEKQFPEIRKQRELQERMQRVGQRGSGLSMSAARSEHEVSEIIDGLSEQENLEKQMRQLAVIPPMLYDADQQRIKFINMNGLMADPMKVYKDRQVMNMWSEQEKETFREKFMQHPKNFGLIASFLERKTVAECVLYYYLTKKNENYKSLVRRSYRRRGKSQQQQQQQQQQQQQQQQQPMPRSSQEEKDEKEKEKEAEKEEEKPEVENDKEDLLKEKTDDTSGEDNDEKEAVASKGRKTANSQGRRKGRITRSMANEANSEEAITPQQSAELASMELNESSRWTEEEMETAKKGLLEHGRNWSAIARMVGSKTVSQCKNFYFNYKKRQNLDEILQQHKLKMEKERNARRKKKKAPAAASEEAAFPPVVEDEEMEASGVSGNEEEMVEEAEATVNNSSDTESIPSPHTEAAKDTGQNGPKPPATLGADGPPPGPPTPPPEDIPAPTEPTPASEATGAPTPPPAPPSPSAPPPVVPKEEKEEETAAAPPVEEGEEQKPPAAEELAVDTGKAEEPVKSECTEEAEEGPAKGKDAEAAEATAEGALKAEKKEGGSGRATTAKSSGAPQDSDSSATCSADEVDEAEGGDKNRLLSPRPSLLTPTGDPRANASPQKPLDLKQLKQRAAAIPPIQVTKVHEPPREDAAPTKPAPPAPPPPQNLQPESDAPQQPGSSPRGKSRSPAPPADKEAEKPVFFPAFAAEAQKLPGDPPCWTSGLPFPVPPREVIKASPHAPDPSAFSYAPPGHPLPLGLHDTARPVLPRPPTISNPPPLISSAKHPSVLERQIGAISQGMSVQLHVPYSEHAKAPVGPVTMGLPLPMDPKKLAPFSGVKQEQLSPRGQAGPPESLGVPTAQEASVLRGTALGSVPGGSITKGIPSTRVPSDSAITYRGSITHGTPADVLYKGTITRIIGEDSPSRLDRGREDSLPKGHVIYEGKKGHVLSYEGGMSVTQCSKEDGRSSSGPPHETAAPKRTYDMMEGRVGRAISSASIEGLMGRAIPPERHSPHHLKEQHHIRGSITQGIPRSYVEAQEDYLRREAKLLKREGTPPPPPPSRDLTEAYKTQALGPLKLKPAHEGLVATVKEAGRSIHEIPREELRHTPELPLAPRPLKEGSITQGTPLKYDTGASTTGSKKHDVRSLIGSPGRTFPPVHPLDVMADARALERACYEESLKSRPGTASSSGGSIARGAPVIVPELGKPRQSPLTYEDHGAPFAGHLPRGSPVTTREPTPRLQEGSLSSSKASQDRKLTSTPREIAKSPHSTVPEHHPHPISPYEHLLRGVSGVDLYRSHIPLAFDPTSIPRGIPLDAAAAYYLPRHLAPNPTYPHLYPPYLIRGYPDTAALENRQTIINDYITSQQMHHNAATAMAQRADMLRGLSPRESSLALNYAAGPRGIIDLSQVPHLPVLVPPTPGTPATAMDRLAYLPTAPQPFSSRHSSSPLSPGGPTHLTKPTTTSSSERERDRDRERDRDREREKSILTSTTTVEHAPIWRPGTEQSSGSSGGGGGSSSRPASHSHAHQHSPISPRTQDALQQRPSVLHNTGMKGIITAVEPSTPTVLRSTSTSSPVRPAATFPPATHCPLGGTLDGVYPTLMEPVLLPKEAPRVARPERPRADTGHAFLAKPPARSGLEPASSPSKGSEPRPLVPPVSGHATIARTPAKNLAPHHASPDPPAPPASASDPHREKTQSKPFSIQELELRSLGYHGSSYSPEGVEPVSPVSSPSLTHDKGLPKHLEELDKSHLEGELRPKQPGPVKLGGEAAHLPHLRPLPESQPSSSPLLQTAPGVKGHQRVVTLAQHISEVITQDYTRHHPQQLSAPLPAPLYSFPGASCPVLDLRRPPSDLYLPPPDHGAPARGSPHSEGGKRSPEPNKTSVLGGGEDGIEPVSPPEGMTEPGHSRSAVYPLLYRDGEQTEPSRMGSKSPGNTSQPPAFFSKLTESNSAMVKSKKQEINKKLNTHNRNEPEYNISQPGTEIFNMPAITGTGLMTYRSQAVQEHASTNMGLEAIIRKALMGGGGKAKVSGRPSSRKAKSPAPGLASGDRPPSVSSVHSEGDCNRRTPLTNRVWEDRPSSAGSTPFPYNPLIMRLQAGVMASPPPPGLPAGSGPLAGPHHAWDEEPKPLLCSQYETLSDSE
Protein: Peptide deformylase (EC 3.5.1.88) (Q8I372)
Organism: Plasmodium falciparum (isolate 3D7)
Interaction partners:
- Trigger factor C-terminal domain-containing protein
- Large ribosomal subunit protein bL28c
- Ribosomal protein S16, mitochondrial, putative
- Mitochondrial ribosomal protein L20, putative
- Ribosomal protein L27, putative
- 40S ribosomal protein S18, putative
- 40S ribosomal protein S19
- 40S ribosomal protein S5, putative
- 60S ribosomal protein L23
- 40S ribosomal protein S3
Sequence:
MLMYYSLFLFNLIICCNVTSIYGYIHNVRSLEPYIKNDQIKNYSSNIKQKRKGSLYLLKNEKDEIKIVKYPDPILRRRSEEVTNFDDNLKRVVRKMFDIMYESKGIGLSAPQVNISKRIIVWNALYEKRKEENERIFINPSIVEQSLVKLKLIEGCLSFPGIEGKVERPSIVSISYYDINGYKHLKILKGIHSRIFQHEFDHLNGTLFIDKMTQVDKKKVRPKLNELIRDYKATHSEEPAL
Protein: Homeobox-leucine zipper protein HAT9 (Homeodomain-leucine zipper protein HAT9) (HD-ZIP protein 9) (P46603)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Probable transcription factor.
Subcellular location: Nucleus {ECO:0000305}.
Interaction partners:
- Homeobox-DDT domain protein RLT1
Sequence:
MGFDDTCNTGLVLGLGPSPIPNNYNSTIRQSSVYKLEPSLTLCLSGDPSVTVVTGADQLCRQTSSHSGVSSFSSGRVVKRERDGGEESPEEEEMTERVISDYHEDEEGISARKKLRLTKQQSALLEESFKDHSTLNPKQKQVLARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLADENIRLQKEIQELKTLKLTQPFYMHMPASTLTKCPSCERIGGGGGGNGGGGGGSGATAVIVDGSTAKGAFSISSKPHFFNPFTNPSAAC
Protein: Kit ligand (Mast cell growth factor) (Stem cell factor) (c-Kit ligand) (Q56JH6)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Subcellular location: Cell membrane {ECO:0000256|ARBA:ARBA00004251}; Single-pass type I membrane protein {ECO:0000256|ARBA:ARBA00004251}. Cell projection, filopodium {ECO:0000256|ARBA:ARBA00004486}. Cell projection, lamellipodium {ECO:0000256|ARBA:ARBA00004510}. Cytoplasm, cytoskeleton {ECO:0000256|ARBA:ARBA00004245}. Secreted {ECO:0000256|ARBA:ARBA00004613}.
Interaction partners:
- Mast/stem cell growth factor receptor
- Mast/stem cell growth factor receptor kita
- Macrophage colony-stimulating factor 1 receptor
- Kit ligand b.
- Colony-stimulating factor 1 receptor, b
- Erb-b2 receptor tyrosine kinase 3b.
- Platelet-derived growth factor receptor alpha
- receptor protein-tyrosine kinase
- Angiopoietin-1 receptor
- Vascular endothelial growth factor receptor 2
Sequence:
MKKSNIWICTCVHLLLYITVAAYSIEIGNPITDDIKKISLLKQNIPKDYKITVRYIPKEVSGMCWVKLNVFHLEVSLKGLAQKFGNISSNKDNIGTFVQILQDMRYHIGPGLEDSMLDFECHYVEEMWLTAKYFEFLEDFFNTANSSRDAEDCEPPPCPTSTKTTITTTTTASTTSAQHSTNEKRNGLPDDPEKGAFLSKVLESNLMWLLTIPFAIAVVVLLVWKIKSRRNTPQTDRSPEEGPALFSGEEANISPLDVGISEKNRLNIIMDV
Protein: Spermidine synthase SPE3 (SPDSY) (EC 2.5.1.16) (Putrescine aminopropyltransferase) (Q12074)
Organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Interaction partners:
- S-adenosylmethionine decarboxylase proenzyme
- Ornithine decarboxylase
- S-methyl-5'-thioadenosine phosphorylase
- Spermine synthase SPE4
- Polyamine oxidase FMS1
- Saccharopine dehydrogenase [NADP
- Arginase
- Deoxyhypusine synthase
Sequence:
MAQEITHPTIVDGWFREISDTMWPGQAMTLKVEKVLHHEKSKYQDVLIFKSTTYGNVLVLDNVIQATERDEFAYQEMIAHLALNSHPNPKKVLVIGGGDGGVLREVVKHDSVEEAWLCDIDEAVIRLSKEYLPEMAASYSHPKVKTHIGDGFQFLRDYQNTFDVIITDSSDPEGPAETLFQKEYFQLLNSALTEKGVITTQAESMWIHLPIIKDLKKACSEVFPVAEYSFVTIPTYPTGTIGFMVCSKDKTCNVKKPLREISDEKEAELYRYYNKKIHEASFVLPTWAAKELN
Protein: Curli production assembly/transport component CsgF (P0AE98)
Organism: Escherichia coli (strain K12)
Function: May be involved in the biogenesis of curli organelles.
Subcellular location: Cell outer membrane {ECO:0000269|PubMed:16522795}.
Interaction partners:
- Curli production assembly/transport component CsgG
- CsgBAC operon transcriptional regulatory protein
- Curli production assembly/transport component CsgE
- Minor curlin subunit
- Major curlin subunit
- Curli assembly protein CsgC
- Hydrogenase-2 operon protein HybE
Sequence:
MRVKHAVVLLMLISPLSWAGTMTFQFRNPNFGGNPNNGAFLLNSAQAQNSYKDPSYNDDFGIETPSALDNFTQAIQSQILGGLLSNINTGKPGRMVTNDYIVDIANRDGQLQLNVTDRKTGQTSTIQVSGLQNNSTDF
Protein: Uncharacterized fimbrial-like protein YraK (P43319)
Organism: Escherichia coli (strain K12)
Function: Part of the yraHIJK fimbrial operon. Could contribute to adhesion to various surfaces in specific environmental niches. Increases adhesion to eukaryotic T24 bladder epithelial cells in the absence of fim operon.
Subcellular location: Fimbrium {ECO:0000305}.
Interaction partners:
- Outer membrane usher protein YraJ
- Uncharacterized fimbrial-like protein YraH
- DNA utilization protein HofP
- Putative L,D-transpeptidase YafK
- Probable fimbrial chaperone YraI
Sequence:
MKRAPLITGLLLISTSCAYASSGGCGADSTSGATNYSSVVDDVTVNQTDNVTGREFTSATLSSTNWQYACSCSAGKAVKLVYMVSPVLTTTGHQTGYYKLNDSLDIKTTLQANDIPGLTTDQVVSVNTRFTQIKNNTVYSAATQTGVCQGDTSRYGPVNIGANTTFTLYVTKPFLGSMTIPKTDIAVIKGAWVDGMGSPSTGDFHDLVKLSIQGNLTAPQSCKINQGDVIKVNFGFINGQKFTTRNAMPDGFTPVDFDITYDCGDTSKIKNSLQMRIDGTTGVVDQYNLVARRRSSDNVPDVGIRIENLGGGVANIPFQNGILPVDPSGHGTVNMRAWPVNLVGGELETGKFQGTATITVIVR
Protein: Myosin-binding protein C, cardiac-type (Cardiac MyBP-C) (C-protein, cardiac muscle isoform) (Q14896)
Organism: Homo sapiens (Human)
Function: Thick filament-associated protein located in the crossbridge region of vertebrate striated muscle a bands. In vitro it binds MHC, F-actin and native thin filaments, and modifies the activity of actin-activated myosin ATPase. It may modulate muscle contraction or may play a more structural role.
Interaction partners:
- Myosin-7
- Actin, alpha cardiac muscle 1
- Titin
- Myosin-6
- Troponin I, cardiac muscle
- Troponin T, cardiac muscle
- Myosin light chain 3
- Myosin regulatory light chain 2, ventricular/cardiac muscle isoform
- Cysteine and glycine-rich protein 3
- Tropomyosin alpha-1 chain
Sequence:
MPEPGKKPVSAFSKKPRSVEVAAGSPAVFEAETERAGVKVRWQRGGSDISASNKYGLATEGTRHTLTVREVGPADQGSYAVIAGSSKVKFDLKVIEAEKAEPMLAPAPAPAEATGAPGEAPAPAAELGESAPSPKGSSSAALNGPTPGAPDDPIGLFVMRPQDGEVTVGGSITFSARVAGASLLKPPVVKWFKGKWVDLSSKVGQHLQLHDSYDRASKVYLFELHITDAQPAFTGSYRCEVSTKDKFDCSNFNLTVHEAMGTGDLDLLSAFRRTSLAGGGRRISDSHEDTGILDFSSLLKKRDSFRTPRDSKLEAPAEEDVWEILRQAPPSEYERIAFQYGVTDLRGMLKRLKGMRRDEKKSTAFQKKLEPAYQVSKGHKIRLTVELADHDAEVKWLKNGQEIQMSGSKYIFESIGAKRTLTISQCSLADDAAYQCVVGGEKCSTELFVKEPPVLITRPLEDQLVMVGQRVEFECEVSEEGAQVKWLKDGVELTREETFKYRFKKDGQRHHLIINEAMLEDAGHYALCTSGGQALAELIVQEKKLEVYQSIADLMVGAKDQAVFKCEVSDENVRGVWLKNGKELVPDSRIKVSHIGRVHKLTIDDVTPADEADYSFVPEGFACNLSAKLHFMEVKIDFVPRQEPPKIHLDCPGRIPDTIVVVAGNKLRLDVPISGDPAPTVIWQKAITQGNKAPARPAPDAPEDTGDSDEWVFDKKLLCETEGRVRVETTKDRSIFTVEGAEKEDEGVYTVTVKNPVGEDQVNLTVKVIDVPDAPAAPKISNVGEDSCTVQWEPPAYDGGQPILGYILERKKKKSYRWMRLNFDLIQELSHEARRMIEGVVYEMRVYAVNAIGMSRPSPASQPFMPIGPPSEPTHLAVEDVSDTTVSLKWRPPERVGAGGLDGYSVEYCPEGCSEWVAALQGLTEHTSILVKDLPTGARLLFRVRAHNMAGPGAPVTTTEPVTVQEILQRPRLQLPRHLRQTIQKKVGEPVNLLIPFQGKPRPQVTWTKEGQPLAGEEVSIRNSPTDTILFIRAARRVHSGTYQVTVRIENMEDKATLVLQVVDKPSPPQDLRVTDAWGLNVALEWKPPQDVGNTELWGYTVQKADKKTMEWFTVLEHYRRTHCVVPELIIGNGYYFRVFSQNMVGFSDRAATTKEPVFIPRPGITYEPPNYKALDFSEAPSFTQPLVNRSVIAGYTAMLCCAVRGSPKPKISWFKNGLDLGEDARFRMFSKQGVLTLEIRKPCPFDGGIYVCRATNLQGEARCECRLEVRVPQ
Protein: Nitrogenase iron-molybdenum cofactor biosynthesis protein NifN (P10336)
Organism: Azotobacter vinelandii
Function: This protein may play a role in the biosynthesis of the prosthetic group of nitrogenase (FeMo cofactor).
Interaction partners:
Sequence:
MAEIINRNKALAVSPLKASQTMGAALAILGLALSMPLFHGSQGCTAFAKVFFVRHFREPVPLQTTAMDQVSSVMGADENVVEALKTICERQNPSVIGLLTTGLSETQGCDLHTALHEFRTQYEEYKDVPIVPVNTPDFSGCFESGFAAAVKAIVETLVPERRDQVGKRPRQVNVLCSANLTPGDLEYIAESIESFGLRPLLIPDLSGSLDGHLDENRFNALTTGGLSVAELATAGQSVATLVVGQSLAGAADALAERTGVPDRRFGMLYGLDAVDAWLMALAEISGNPVPDRYKRQRAQLQDAMLDTHFMLSSARTAIAADPDLLLGFDALLRSMGAHTVAAVVPARAAALVDSPLPSVRVGDLEDLEHAARAGQAQLVIGNSHALASARRLGVPLLRAGFPQYDLLGGFQRCWSGYRGSSQVLFDLANLLVEHHQGIQPYHSIYAQKPATEQPQWRH
Protein: Aldo-keto reductase (Aldo-keto reductase family 1 member C4) (Prostaglandin F synthase) (Q2TJA5)
Organism: Sus scrofa (Pig)
Interaction partners:
Sequence:
MALSRCVKLNDGHLMPVLGLGTLVSEGVPKSKAGEATRVAIEVGYRHIDAAYVYENEEEVGSALREKIADGTVKREELFYTTKLWATFFRPELVRPALERSLKKLRLDYVDLFIIHVPITMKPGEELLPKDASGKVIFDTVDLRDTWAALEKCKDAGLTKSIGVSNFNHKQLEMILNKPGLKYKPVCNQVECHPYLNQSKLLEFCKSKDIVLVAYSALGSQRNSKWVEESNPYLLEDPVLNAIAKKHNRSPAQVALRYQLQRGVVVLAKSFNEQRIKENFQVFDFELPPEDMKTIDGLNQNLRYFKLLFAVDHPYYPYSEEY