wanglab/gogpt-training-data huggingface dataset:
Protein: PsbP domain-containing protein 7, chloroplastic (Photosystem II reaction center PsbP family protein) (F4J7A7)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Subcellular location: Plastid, chloroplast {ECO:0000305}.
Interaction partners:
- RING finger protein
- adenylate kinase
- Uncharacterized protein At2g34110
- Uncharacterized protein
- Peptidyl-prolyl cis-trans isomerase FKBP17-1, chloroplastic
- Protein FAF-like
- PsbP domain-containing protein 3, chloroplastic
- F-box protein At1g11270
- Peptidyl-prolyl cis-trans isomerase FKBP17-3, chloroplastic
- Thylakoid lumenal 19 kDa protein, chloroplastic
Sequence:
MSLKPYFSLLYSSPTNVKLSNFLIAQQPSGDLKTTPAEEFSPLVEKFNRRLLLGVGSSSVLAIGANFGGTTSFILGLSPGIGRNLKLDVIYPIGGYSRCIDTVEGFEFIYPATWVGDQTLLYRAAEKSERENSLDLPPARNSRRKNVNEPVVAFGPPGSTGELNVSVIVSPVSPSFSIEAFGGPKEVGEAIVRTVTGSGQRADLKGTLLESSIRQDSERNLKYYELEFKVESPLFRRHNVAVCCAHSGRLYTLNAQAPESAWSEVKSEIYTTAKSFNIIS
Protein: Upf3b protein (Q149I6)
Organism: Mus musculus (Mouse)
Subcellular location: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
Interaction partners:
Sequence:
MKEEKDHRPKEKRVTLFTPQGATGGCIGATAEGAKGDDRQDRNRDKKEALSKVVIRRLPPTLTKEQLQEHLQPMPEHDYFEFFSNDTSLYPHMYARAYINFKNQEDILLFRDRDYERDQERMIRERERLKRQEEERRRQQQKERYEKEKAFKRKEEEMKREKEALRDKGKKSENTESICSLEKIEKKEEVVKRDRIRNKDRPAMQLYQPGARSRSRLCPADDSIKPGDSPVDKKQESGISHRKEGGEE
Protein: Alpha/beta hydrolase fold protein (D2J2T6)
Organism: Ochrobactrum sp. T63
Interaction partners:
Sequence:
MTINYHELETSHGRIAVRESEGEGAPLLMIHGNSSSGAIFAPQLEGEIGKKWRVIAPDLPGHGKSTDAIDPDRSYSMEGYADAMTEVMQQLGIADAVVFGWSLGGHIGIEMIARYPEMRGLMITGTPPVAREEVGQGFKSGPDMALAGQEIFSERDVESYARSTCGEPFEASLLDIVARTDGRARRIMFEKFGSGTGGNQRDIVAEAQLPIAVVNGRDEPFVELDFVSKVKFGNLWEGKTHVIDNAGHAPFREAPAEFDAYLARFIRDCTQ
Protein: 11-beta-hydroxysteroid dehydrogenase 1 (11-DH) (11-beta-HSD1) (EC 1.1.1.146) (11-beta-hydroxysteroid dehydrogenase/microsomal carbonyl reductase) (11-beta-HSD1A/MCR) (11beta-HSD1A) (7-oxosteroid reductase) (EC 1.1.1.201) (Corticosteroid 11-beta-dehydrogenase isozyme 1) (liver-type 11-beta-HSD) (P50172)
Organism: Mus musculus (Mouse)
Function: Controls the reversible conversion of biologically active glucocorticoids such as 11-dehydrocorticosterone to corticosterone in the presence of NADP(H). Participates in the corticosteroid receptor-mediated anti-inflammatory response, as well as metabolic and homeostatic processes. Bidirectional in vitro, predominantly functions as a reductase in vivo, thereby increasing the concentration of active glucocorticoids. It has broad substrate specificity, besides glucocorticoids, it accepts other steroid and sterol substrates. Interconverts 7-oxo- and 7-hydroxy-neurosteroids such as 7-oxopregnenolone and 7beta-hydroxypregnenolone, 7-oxodehydroepiandrosterone (3beta-hydroxy-5-androstene-7,17-dione) and 7beta-hydroxydehydroepiandrosterone (3beta,7beta-dihydroxyandrost-5-en-17-one), among others (By similarity). Catalyzes the stereo-specific conversion of the major dietary oxysterol, 7-ketocholesterol (7-oxocholesterol), into the more polar 7-beta-hydroxycholesterol metabolite. 7-oxocholesterol is one of the most important oxysterols, it participates in several events such as induction of apoptosis, accumulation in atherosclerotic lesions, lipid peroxidation, and induction of foam cell formation (By similarity). Mediates the 7-oxo reduction of 7-oxolithocholate mainly to chenodeoxycholate, and to a lesser extent to ursodeoxycholate, both in its free form and when conjugated to glycine or taurine, providing a link between glucocorticoid activation and bile acid metabolism (By similarity). Catalyzes the synthesis of 7-beta-25-dihydroxycholesterol from 7-oxo-25-hydroxycholesterol in vitro, which acts as ligand for the G-protein-coupled receptor (GPCR) Epstein-Barr virus-induced gene 2 (EBI2) and may thereby regulate immune cell migration.
Subcellular location: Endoplasmic reticulum membrane; Single-pass type II membrane protein.
Interaction partners:
- steroid 11beta-monooxygenase
- 11-beta-hydroxysteroid dehydrogenase type 2
- 3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase type 1
- Cytochrome P450 11B2, mitochondrial
- Steroid 21-hydroxylase
- Aldo-keto reductase family 1 member D1
- 3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase type 2
- Cytochrome P450 2E1
- NADPH-dependent 3-keto-steroid reductase Hsd3b5
- UDP-glucuronosyltransferase 2A3
Sequence:
MAVMKNYLLPILVLFLAYYYYSTNEEFRPEMLQGKKVIVTGASKGIGREMAYHLSKMGAHVVLTARSEEGLQKVVSRCLELGAASAHYIAGTMEDMTFAEQFIVKAGKLMGGLDMLILNHITQTSLSLFHDDIHSVRRVMEVNFLSYVVMSTAALPMLKQSNGSIAVISSLAGKMTQPMIAPYSASKFALDGFFSTIRTELYITKVNVSITLCVLGLIDTETAMKEISGIINAQASPKEECALEIIKGTALRKSEVYYDKSPLTPILLGNPGRKIMEFFSLRYYNKDMFVSN
Protein: Proto-oncogene serine/threonine-protein kinase mos (EC 2.7.11.1) (Oocyte maturation factor mos) (Proto-oncogene c-Mos) (P50118)
Organism: Sus scrofa (Pig)
Subcellular location: Cytoplasm {ECO:0000250|UniProtKB:P00540}.
Interaction partners:
- Dual specificity mitogen-activated protein kinase kinase 1
- Dual specificity mitogen-activated protein kinase kinase 2
- Heat shock protein 90 alpha family class B member 1
- Heat shock protein HSP 90-alpha
- RAS related
- small monomeric GTPase
- GTPase NRas
- Ras-related protein R-Ras2
- RAF proto-oncogene serine/threonine-protein kinase
- Serine/threonine-protein kinase A-Raf
Sequence:
MPSPFPRRRCLPGDFSPSVDSRPCSSPCELPGPTGKLFLGGTPPRALRLPRRLAWCSIDWEQVCLLQRLGAGGFGSVYKATYHGVPVAIKQVSRCTKNRLASQRSFWAELNIARLRHANIVRVVAASTRTPAAFDSLGSIIMEFGGNVTLHQVIYGATGCPEEDGPPCSAGEQLNLEKCLKYSLDVVSGLLFLHSQGIVHLDLKPANILISEQDVCKISDFGCSERLEDLRFRPRHHLGGTYTHRAPELLKGEPVTPKADIYSFAITLWQMTTRQVPYSGERQHVLYAVVAYNLRPSLSAAVFTESVPGKKLEDIIQCGWTAPAQQRPSAQLLLLDLRALQAELG
Protein: Phosphatidylglycerophosphate phosphatase 1, chloroplastic/mitochondrial (AtPGPP1) (PGP phosphatase 1) (EC 3.1.3.27) (Q9LXR9)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Phosphatidylglycerophosphate (PGP) phosphatase involved in the biosynthesis of phosphatidylglycerol (PG), a phosphoglycerolipid predominantly present in chloroplastic thylakoid membranes and which has important photosynthetic function; seems to use PGP 34:3, PGP 34:2 and PGP 34:1 as substrates. Required for thylakoid membranes development and chloroplast function. Necessary for normal cell growth. Required for root growth and columella cells organization.
Subcellular location: Plastid, chloroplast {ECO:0000269|PubMed:27541283, ECO:0000269|PubMed:27614107, ECO:0000269|PubMed:29476828}. Mitochondrion {ECO:0000269|PubMed:29476828}. Note=Localized in chloroplast of leaf mesophyll cells, but in mitochondrion of root cells. {ECO:0000269|PubMed:29476828}.
Interaction partners:
- CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 2
- CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 1, chloroplastic/mitochondrial
- Cardiolipin synthase
- Lysophospholipid acyltransferase 1
- Lysophospholipid acyltransferase 2
- Non-specific phospholipase C4
- Non-specific phospholipase C6
- Non-specific phospholipase C5
- Probable 1-acyl-sn-glycerol-3-phosphate acyltransferase 4
- Non-specific phospholipase C1
Sequence:
MQTPSMAASTTSYYPIPKSFLLSPPRHKRNPNLISCSTKPICSPPPPSSSSSSPLQTTTTHRSQKQNLRLPTFEDSFLLYQFSSPTEDPGFSNRIPEQFDGEPRELVLPRVEDNNKGLAISSNMWWADLKAALGQRINIEGIVSSVSVVVKDRQFVLPHVSVKDLRYIDWEVLKRKGFKGVVFDKDNTLTAPYSLAIWPPLRPSIERCKAVFGHDIAVFSNSAGLTEYDHDDSKAKALEAEIGIRVLRHRVKKPAGTAEEVEKHFGCTSSELIMVGDRPFTDIVYGNRNGFLTVLTEPLSRAEEPFIVRQVRRLELALLKRWLRKGLKPVDHSLVSDITQFVKVPSDL
Protein: KICSTOR complex protein kaptin (Actin-associated protein 2E4) (A0A1D5PJB7)
Organism: Gallus gallus (Chicken)
Function: As part of the KICSTOR complex may function in the amino acid-sensing branch of the TORC1 signaling pathway.
Subcellular location: Lysosome membrane {ECO:0000250|UniProtKB:Q9Y664}. Cell projection, lamellipodium {ECO:0000269|PubMed:10099934}. Cell projection, stereocilium {ECO:0000269|PubMed:10099934, ECO:0000269|PubMed:11409409}. Note=Localization to lysosomes is amino acid-independent (By similarity). Colocalizes with F-actin (By similarity). {ECO:0000250|UniProtKB:Q9Y664}.
Interaction partners:
- KICSTOR subunit 2
- Uncharacterized protein.
- Integrin alpha FG-GAP repeat containing 2.
- Uncharacterized protein.
- NPR3 like, GATOR1 complex subunit.
- DEP domain-containing protein.
- GATOR2 complex protein WDR24
- Meiosis regulator for oocyte development
- SEH1 like nucleoporin
- GATOR2 complex protein WDR59
Sequence:
MAGPCPLVEDSCSRLPSQSNVYGLAALPGAGGLLAATLKGKVLHFRYQHLRHKLRPVARELQFTYIPVDAEIVSIGCFQKSAPKRGLVVGITFIKDSGDKPSPFLNIYCDYEPGCEFDLDSVAQSCLNLELRFTPLQLCHAEVHIGDRCDTVFLLSGTDPGIHLYRENEGLHQFEEQPLHELFPELQELPSSALWLDVCTVPSSRRRLTAVGCQSGYVRVAHVDQDTRAVLQSWSIQQDGPISTVLLFPLEEPDDDGDVAGGHRGADDVGPSAPGPEPTPHYSLLVASTIEMSVVYRDVLSRGLTEQLSLPGSDHHDAVLCAMLACTALDGGREVLLGTYGQELLCYAYRGRRCGFQLLWTRRFPGPVLALCGADLTGDGLREVAVGCLQGLHVLQHSLEPTAQRLKERLRREVARRAQQRGGEGTGTPK
Protein: Desmoyokin (Q61484)
Organism: Mus musculus (Mouse)
Subcellular location: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
Interaction partners:
Sequence:
MKTSAPEVKGDVKGPQMAVKGSRVDIETPNLEGTLTGPKISSPSGKIGACRISMADVDLNVAAPKGKGGVDVILPNVEGKAKGLEVDVKGPKMDISAPDVEVHGPEWNLKMPKFSVPGVKGEGLDVNVTLPEGDISISGPKVNVEAPNVNMEGLGCKLKGPDINLPEVSVKTPKISMPDVDLHIKGPKVKGAYEVTPPKLEGELKGSKVDIDTRQVDVHGPDLKIPKMKMPKFSVPGFKAEGPEVDVNLPKADLDISGTKVEVSAPDVSIEGSEGKLKGHKFKMPEMNIRAPKISMPDVDLHLKGPNVKGAYDVTVPRAEGEIKVPDVELKSAKLDIDVPNVDVQGPELHMKMPKIKIPKFGMPGFKAESPEMEVNLPKSDIDVSGPNVDVKVPDVNIEGPEGKLKGPKLKMPEMNIKAPKISMPDVDLHMKGPKVKGAYDVTMPKLEGDLKGPNVDASVPDVDVHGPDWNLKMPKIPLPKFSMPSLKGEGPELDVNMPKADVDISVPKLDISAPDLNLEGPEGKLKGTKFKMPEMHFKAPKVSLPDVDLDLKGPKMKGNLDMSAPKIEGEMKAPDVDIKGPNVDIKAPEVDVQGPEWSLKMPKMKMPKFSMPTLKGEGPDVDVSLPKATIDVSGPKLDIETSDVSLEGPEGKLKGPKFKMPDMHFKAPKISMPDVDLNMKGPKVKGDMDVTVPKIEGEMKVPDVDIKGPKVDISAPDVDVQGPDWHLKMPKMKMPKFSMPGFKAEGPEVDVNLPKADIDVSGPKVDIDVPDVNIEGPDAKLKGPKFKMPEMNIKAPKISMPDLHLKGPKVKGDVDVSLPKVEGDLKGPDIDIKGPKMDINAPDMDVQGPDWHLKMPKMKMPKFSMPGFKAEGPEVDVNLPKADIDVSGPKVDIEAPDVSIEGPEGKLKGPKFKMPDMHFKAPKISMPDVDLNIKGPKGKADVDASLPEVEGGVKVPDVDIKGPKVGIDAPDVEVHGPDWHLKMPKVKMPKFSMPGFKGEGPEVDIPKANIDVSGPKVDIDVPDVNIEGPDTKLKGPKFKMPEMNIKPQKISMPDVSLNLKGPKVKADCDVSVPKVGGEIKAPAVDIKGPKVEAPDVEVHGPDWHLKMPKVKMPKFSMPGFKGEGAEVDVNLQKANIDVSGPKVDIDVPDVNIEGPEGKLKGPKFKMPSMNIQTHKISMPDVGLNLKGPKLKSGVDVSLPKVEGELKGPEVDVDVGDIDIECPEGKLKGPK
Protein: UDP-galactose translocator 1 (Q02334)
Organism: Caenorhabditis elegans
Subcellular location: Membrane {ECO:0000305}; Multi-pass membrane protein {ECO:0000305}. Cytoplasmic granule membrane {ECO:0000269|PubMed:17913784}. Note=Localizes to cortical granules during meiotic prometaphase I and metaphase I. {ECO:0000269|PubMed:17913784}.
Interaction partners:
- Conserved oligomeric Golgi complex subunit 4
- Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 homolog
Sequence:
MKFQNVHISHQDEDKEKLLPNDKDVEKADESPSSSRPSFVFKCYVIASMTFIWTAYTLTIKYTRSTVNPDMMYSSTSVVLCAEILKLVITFAMFYKECNFDSRQFSEQVSKYYINAPRELAKMSVPSFAYALQNNLDFVGLSNLDAGLYQVTTQLKVVSTAFFMMLFLGRKFSTRRWMAITLLMFGVAFVQMNNVSASEANTKRETAENYIVGLSAVLATCVTAGFAGVYFEKMLKDGGSTPFWIRNMQMYSCGVISASIACLTDFSRISDKGFFFGYTDKVWAVVILLGVGGLYISLVMRYLDNLYKSMASAVSIILVVVLSMLIFPDIFIGMYFVLGTICVVLAVLLYNSVNE
Protein: Ubiquitin-like protein 5 (Q9FGZ9)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Subcellular location: Cytoplasm {ECO:0000250}.
Interaction partners:
- Pre-mRNA-splicing factor 38
- Microfibril-associated protein-like
- Microfibrillar-associated protein-like protein
- SART-1 family protein DOT2
- At3g14700
- Protein EARLY FLOWERING 5
- Uncharacterized conserved protein UCP015417, vWA
- Suppressor of mec-8 and unc-52 protein homolog 1
- Pre-mRNA-processing-splicing factor 8A
- Pre-mRNA-processing-splicing factor 8B
Sequence:
MIEVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN
Protein: Putative uncharacterized protein YLR294C (O13543)
Organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Subcellular location: Membrane {ECO:0000305}; Single-pass membrane protein {ECO:0000305}.
Interaction partners:
Sequence:
MMLRKPKKVIELFIASSLSKKKQTEPQAEQDHYFWLSSSHLFIFESSTIKKKQNTLRTLCNQPHKMQNLFFKQKIQLYIDTSLSFLLLLFFYFNNYYFLSMTYASLVNK
Protein: Zinc finger protein 320 (A2RRD8)
Organism: Homo sapiens (Human)
Function: May be involved in transcriptional regulation.
Subcellular location: Nucleus {ECO:0000305}.
Interaction partners:
- Deleted in malignant brain tumors 1 protein
- Zinc finger protein 468
Sequence:
MALSQGLLTFRDVAIEFSQEEWKCLDPAQRTLYRDVMLENYRNLVSLDISSKCMMNTLSSTGQGNTEVIHTGTLQRQASYHIGAFCSQEIEKDIHDFVFQWQEDETNDHEAPMTEIKKLTSSTDRYDQRHAGNKPIKGQLESRFHLHLRRHRRIHTGEKPYKCEECEKVFSCKSHLEIHRIIHTGEKPYKCKVCDKAFKHDSHLAKHTRIHRGDKHYTCNECGKVFDQKATLACHHRSHTGEKPYKCNECGKTFSQTSHLVYHHRLHTGEKPYKCNECGKTFARNSVLVIHKAVHTAEKPYKCNECGKVFKQRATLAGHRRVHTGEKPYRCEECDKVFSRKSHLERHRRIHTGEKPYKCKVCDKAFRSDSRLAEHQRVHTGERPYTCNECGKVFSTKAYLACHQKLHTGEKLYECEECDKVYIRKSHLERHRRIHTGEKPHKCGDCGKAFNSPSHLIRHQRIHTGQKSYKCHQCGKVFSLRSLLAEHQKIPFGDNCFKCNEYSKPSSIN
Protein: Nucleoporin 62 like isoform X1 (Nucleoporin 62-like) (E9QIQ3)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Subcellular location: Nucleus, nuclear pore complex {ECO:0000256|ARBA:ARBA00004567}.
Interaction partners:
- Nucleoporin 54
- Nuclear pore complex protein Nup93
- Nucleoporin 58.
- Nucleoporin 214.
- Nucleoporin 88
- Nuclear pore complex protein
- Nup54 domain-containing protein.
- Nucleoporin 155.
- Nuclear pore complex protein Nup98-Nup96
- Nucleoporin 205.
Sequence:
MAFNFGQTGTGGFNFGTPKTTAAATTGFGVPQGSSTPAGGGFSFGANQPQTQNFGNPPSQIAGLLAQPTQNNGSTQGGFGFGAQAQSTTAGGGFSFGGSLPKLSTPAAPQPATTGVSLGASTTGTGFSLGGLTPQTTAAQQPMGGFSFGAPKVQAASVAPAQPTPVLSLGVQPTTGLSLGAPTAASIASTTAINFGIKTSATPAPASTALSSQSSTAPVSSLFANPIASTPVTGFTLGSSTASVAPVMTSGSSAPASLSLKPLGAVPAITTAAASTGATTGFSLGLKTAASTALASTTATSTTVVTASTAPVMSYAQLEALINKWSSELEDQERHFLQQATQVNAWDRMLVENGEKITALHKDMEKVKLDQRRLDQELDFILSQQKELEDLLSPLEESVKEQSGTIYMQNADEERERTYKLAENVDAQLKRMSQDLKEIIEHLNTSSGPADTADPLQQICKILNAHMDSLQWVEQNSVLLQRRVEEVSKLCESRSKEQEKSFRLNFQ
Protein: Probable cleavage and polyadenylation specificity factor subunit 2 (Cleavage and polyadenylation specificity factor 100 kDa subunit) (CPSF 100 kDa subunit) (Q9V3D6)
Organism: Drosophila melanogaster (Fruit fly)
Function: Component of the cleavage and polyadenylation specificity factor (CPSF) complex that plays a key role in pre-mRNA 3'-end formation, recognizing the AAUAAA signal sequence and interacting with poly(A) polymerase and other factors to bring about cleavage and poly(A) addition. Required for the cotranscriptional processing of 3'-ends of polyadenylated and histone pre-mRNA.
Subcellular location: Nucleus {ECO:0000305}.
Interaction partners:
- LD24014p
- Cleavage and polyadenylation specificity factor subunit 4
- Cleavage stimulation factor subunit 1
- Symplekin
- Cleavage and polyadenylation specificity factor subunit 1
- Cleavage and polyadenylation specificity factor 73
- Cleavage stimulation factor 64 kD subunit
- Pre-mRNA cleavage complex 2 protein Pcf11
- polynucleotide adenylyltransferase
- Factor interacting with poly
Sequence:
MTSIIKLHTISGAMDESPPCYILQIDDVRILLDCGWDEKFDANFIKELKRQVHTLDAVLLSHPDAYHLGALPYLVGKLGLNCPIYATIPVFKMGQMFMYDLYMSHFNMGDFDLFSLDDVDTAFEKITQLKYNQTVSLKDKGYGISITPLNAGHMIGGTIWKIVKVGEEDIVYATDFNHKKERHLSGCELDRLQRPSLLITDAYNAQYQQARRRARDEKLMTNILQTVRNNGNVLIAVDTAGRVLELAHMLDQLWKNKESGLMAYSLALLNNVSYNVIEFAKSQIEWMSDKLTKAFEGARNNPFQFKHIQLCHSLADVYKLPAGPKVVLASTPDLESGFTRDLFVQWASNANNSIILTTRTSPGTLAMELVENCAPGKQIELDVRRRVDLEGAELEEYLRTQGEKLNPLIVKPDVEEESSSESEDDIEMSVITGKHDIVVRPEGRHHSGFFKSNKRHHVMFPYHEEKVKCDEYGEIINLDDYRIADATGYEFVPMEEQNKENVKKEEPGIGAEQQANGGIVDNDVQLLEKPTKLISQRKTIEVNAQVQRIDFEGRSDGESMLKILSQLRPRRVIVIHGTAEGTQVVARHCEQNVGARVFTPQKGEIIDVTSEIHIYQVRLTEGLVSQLQFQKGKDAEVAWVDGRLGMRVKAIEAPMDVTVEQDASVQEGKTLTLETLADDEIPIHNSVLINELKLSDFKQTLMRNNINSEFSGGVLWCSNGTLALRRVDAGKVAMEGCLSEEYYKIRELLYEQYAIV
Protein: Golgin subfamily A member 8A (88 kDa Golgi matrix protein) (GM88) (GM88 autoantigen) (A7E2F4)
Organism: Homo sapiens (Human)
Function: May be involved in maintaining Golgi structure.
Subcellular location: Golgi apparatus, Golgi stack membrane {ECO:0000250}; Peripheral membrane protein {ECO:0000250}.
Interaction partners:
- Golgin subfamily B member 1
Sequence:
MLPVDGEERKSEGSDTEGDRTSPCAVSSATLKDLEVGGSGRRCSDPAGQPSNLLPQRGLGAPLPAETAHTQPSPNDRSLYLSPKSSSASSSLHARQSPCQEQAAVLNSRSIKISRLNDTIKSLKQQKKQVEHQLEEEKKANNEKQKAERELEGQIQRLNTEKKKLNTDLYHMKHSLRYFEEESKDLAGRLQRSSQRIGELEWSLCAVAATQKKKPDGFSSRSKALLKRQLEQSIREQILLKGHVTQLKESLKEVQLERDQYAEQIKGERAQWQQRMRKMSQEVCTLKEEKKHDTHRVEELERSLSRLKNQMAEPLPPDAPAVSSEVELQDLRKELERVAGELQAQVENNQCISLLNRGQKERLREQEERLQEQQERLREREKRLQQLAEPQSDLEELKHENKSALQLEQQVKELQEKLGQVMETLTSAEKEPEAAVPASGTGGESSGLMDLLEEKADLREHVEKLELGFIQYRRERCHQKVHRLLTEPGDSAKDASPGGGHHQAGPGQGGEEGEAAGAAGDGVAACGSYSEGHGKFLAAARNPAAEPSPGAPAPQELGAADKHGDLCEASLTNSVEPAQGEAREGSSQDNPTAQPVVQLLGEMQDHQEHPGLGSNCCVPCFCWAWLPRRRR
Protein: Protein DAY-LENGTH-DEPENDENT DELAYED-GREENING 1, chloroplastic (Potassium/proton antiporter DLDG1) (Q8RXP7)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Subcellular location: Plastid, chloroplast envelope {ECO:0000269|PubMed:31665522}. Plastid, chloroplast membrane {ECO:0000269|PubMed:31665522}; Multi-pass membrane protein {ECO:0000255}.
Interaction partners:
- Membrane lipoprotein
- Pentatricopeptide repeat-containing protein CRR2, chloroplastic
- Small ribosomal subunit protein uS4m
- P-loop containing nucleoside triphosphate hydrolases superfamily protein
- At5g19500
- F14J22.5 protein
- Probably inactive leucine-rich repeat receptor-like protein kinase At3g28040
- ADP,ATP carrier protein
- Cation/H
Sequence:
MSLMSSSMVLCHCLSFSSQNPDPESSSSSLLRYKPCDSISLWGKRRKKLWRFVPSAEKNNSHTGNNNKRRRSWWQRFFFDDDGNWLGLRDDDIVDETTELAKDDEMSDEEKFETWKRRAEAIVELREGQEEIGDSGVVADVTKKWEDWIVDSDDSFVESWTRDSAGSDDNLELDELTIPDGGLVKMVRDMVLGAEEEDILYEDRIFRYASSKSAKFLAVLILIPWALDFLAHDYLLMPFLDRYVKTVPLAAQTLDVRRNQKLEMVKELNREKARYRLEVEIGKSPPLSDDDLWWEMRGKALELRDEWRLENRKAFANIWSDMVFGISLFVLLYANQGRVALLKFTGYKIINNISDTGKAFLIILITDIFLGYHSESGWETLLEIIMEHYGLEVEQSTITIFICLVPVIMDACVKLWLFKFLPRLSPRVSNIFQEMKRH
Protein: Purine-rich element-binding protein gamma (Purine-rich element-binding protein G) (Q9UJV8)
Organism: Homo sapiens (Human)
Subcellular location: Nucleus {ECO:0000250}.
Interaction partners:
Sequence:
MERARRRGGGGGRGRGGKNVGGSGLSKSRLYPQAQHSHYPHYAASATPNQAGGAAEIQELASKRVDIQKKRFYLDVKQSSRGRFLKIAEVWIGRGRQDNIRKSKLTLSLSVAAELKDCLGDFIEHYAHLGLKGHRQEHGHSKEQGSRRRQKHSAPSPPVSVGSEEHPHSVLKTDYIERDNRKYYLDLKENQRGRFLRIRQTMMRGTGMIGYFGHSLGQEQTIVLPAQGMIEFRDALVQLIEDYGEGDIEERRGGDDDPLELPEGTSFRVDNKRFYFDVGSNKYGIFLKVSEVRPPYRNTITVPFKAWTRFGENFIKYEEEMRKICNSHKEKRMDGRKASGEEQECLD
Protein: Methyl-CpG-binding domain protein 3 (Methyl-CpG-binding protein MBD3) (Q9Z2D8)
Organism: Mus musculus (Mouse)
Function: Acts as a component of the histone deacetylase NuRD complex which participates in the remodeling of chromatin (By similarity). Acts as transcriptional repressor and plays a role in gene silencing (By similarity). Does not bind methylated DNA by itself. Binds to a lesser degree DNA containing unmethylated CpG dinucleotides (By similarity). Recruits histone deacetylases and DNA methyltransferases (By similarity).
Subcellular location: Nucleus {ECO:0000269|PubMed:14610093, ECO:0000269|PubMed:9774669}. Chromosome {ECO:0000250|UniProtKB:O95983}. Note=Detected on chromatin, at promoter regions of active genes (By similarity). Nuclear, in discrete foci (PubMed:9774669). {ECO:0000250|UniProtKB:O95983, ECO:0000269|PubMed:9774669}.
Interaction partners:
- Chromodomain-helicase-DNA-binding protein 4
- Metastasis-associated protein MTA2
- Histone deacetylase 1
- Histone-binding protein RBBP7
- Histone-binding protein RBBP4
- Histone deacetylase 2
- Metastasis-associated protein MTA1
- Transcriptional repressor p66 alpha
- DNA helicase
- Chromodomain-helicase-DNA-binding protein 5
Sequence:
MERKRWECPALPQGWEREEVPRRSGLSAGHRDVFYYSPSGKKFRSKPQLARYLGGSMDLSTFDFRTGKMLMNKMNKSRQRVRYDSSNQVKGKPDLNTALPVRQTASIFKQPVTKITNHPSNKVKSDPQKAVDQPRQLFWEKKLSGLSAFDIAEELVRTMDLPKGLQGVGPGCTDETLLSAIASALHTSTLPITGQLSAAVEKNPGVWLNTAQPLCKAFMVTDDDIRKQEELVQQVRKRLEEALMADMLAHVEELARDGEAPLDKACAEEEEEEEEEEEEPEPERV
Protein: TATA box-binding protein-like 1 (TBP-like 1) (TATA box-binding protein-related factor 2) (TBP-related factor 2) (TBP-like factor) (xlTLF) (Q9W6Z2)
Organism: Xenopus laevis (African clawed frog)
Function: Part of a specialized transcription system that mediates the transcription of most ribosomal proteins through the 5'-TCT-3' motif which is a core promoter element at these genes. Seems to also mediate the transcription of NF1. Does not bind the TATA box (By similarity). Members of the TBP family are differentially required to regulate transcription and development during early embryogenesis. Particularly regulates genes that have a role in catabolism.
Subcellular location: Cytoplasm {ECO:0000250}. Nucleus {ECO:0000250}.
Interaction partners:
Sequence:
MDADSDVALDILITNVVCVFRTRCHLNLRKIALEGLNVIYKREVSKVLMKLRKPRITATIWSSGKIICTGATSEEEAKVGARRLARSLQKLGFQVKFTEFKVVNVLAVCTMPFEIRLNEFTKQNRPHASYEPELHPAVCYRIKSLRATLQIFSTGSITVTGPDVKSVASAIEQIYPFVFESRKTIL
Protein: Beta-fructofuranosidase, insoluble isoenzyme CWINV2 (EC 3.2.1.26) (Cell wall beta-fructosidase 2) (AtbetaFRUCT2) (Cell wall invertase 2) (AtcwINV2) (Sucrose hydrolase 2) (Q1PEF8)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Subcellular location: Secreted, extracellular space, apoplast {ECO:0000305}. Secreted, cell wall {ECO:0000305}. Note=Associated to the cell wall. {ECO:0000305}.
Interaction partners:
- alpha-D-xyloside xylohydrolase
- Probable galactinol--sucrose galactosyltransferase 4
- Probable fructokinase-5
- Probable fructokinase-6, chloroplastic
- Probable fructokinase-2
- Probable fructokinase-1
- Probable fructokinase-4
- Probable fructokinase-3
- Probable fructokinase-7
- Probable hexokinase-like 2 protein
Sequence:
MSAPKFGYVLLLIVLINISNNGVDAFHKVFKKLQSKSTSLESVSPLHRTAYHFQPPRHWINDPNAPMLYKGVYHLFYQYNPKGAVWGNIVWAHSVSKDLINWEALEPAIYPSKWFDINGTWSGSATHVPGKGPVILYTGITENQTQIQNYAIPQDLSDPYLKTWIKPDDNPIVKPDNGENGSAFRDPTTAWFNKKDGYWRMLVGSKRKNRGIAYMYKSRDFKKWVKSKRPIHSRKKTGMWECPDFFPVSVTDKKNGLDFSYDGPNAKHVLKVSLDLTRYEYYTLGTYDTKKDRYRPDGYTPDGWDGLRFDYGNYYASKTFFDDKTNRRILWGWANESDTVQDDTVKGWAGIQLIPRTILLDSSGKQLVFWPIEEIESLRGKNVQMTNQKMEMGQRFEVQGITPAQVDVDVTFNVGNLEKAEKFDESFATKPLELCNLKGSNVNGGVGPFGLITLATSDLEEYTPVFFRVFKDAASNKPKVLMCSDAKPSSLKKDTGTDAKERMYKPSFAGFVDVGLLDGKISLRSLIDHSVVESFGAKGKTVITSRVYPTKAVGEKAHLFVFNNGSQPVTVESLNAWNMQKPLKMNQGAK
Protein: C-CAP/cofactor C-like domain-containing protein (Q57VS2)
Organism: Trypanosoma brucei brucei (strain 927/4 GUTat10.1)
Interaction partners:
Sequence:
MPPKKSELEAREEEEEEEEEEEEEEEEEEEEWEESNDLSQLEDGPSTFYVGGFSSMQKLQEALDAVTYREDLVIVYPGAYLEKEVVIEESRLDGLRIMSVPVALGRKAGYRKKIHIPRDERRLGPWYAPYGGEAPATATVTPTAPDPQLFPVIEGRLIVRHSRPFVSVDEDAEIPEGLQGIKHYDDEQDRVADGDEEEENADDAPEGSTEEAEMVHKAKDNHLEMQGLCFFGGIELNPLTRSTFRHCVFGDYALQRKDPLATTEAVETTTCQPSTEPPVLPTVVAHPLSEALIEFCIIYGSAKQALYAYPRCSLQIHTSMILGPVEGTPTTYTADQFRAARHAQQSPLFRLKNRWKKVVSQPKIPTKAMCNVALYLDDADVSVRDCFIAHTDIGVMLVDGCAGTELKFLRLESHSTVGILFTGECGAAKVKCCAIRWCGRECILVKGRVPPIPPDAEAVERVACERAQREAEENENEEVEEEGEEEEDADVPRPPPIPAQHPSLQKNALEGTVRLEGDVSCGTMCDNVIYMEKDDTQPPLSGPSEERRFLLKGFHVHVRGSTPLESEDN