wanglab/gogpt-training-data huggingface dataset:
Protein: ATPase histone chaperone abo1 (EC 3.6.1.-) (ATPase family AAA domain-containing protein abo1) (AAA-ATPase) (O14114)
Organism: Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Function: ATPase histone chaperone which facilitates loading of histone H3-H4 onto DNA in an ATP-dependent manner. Plays a genome-wide role in nucleosome organization and establishment of chromatin. Also plays a role in heterochromatin assembly by stabilizing recruitment of the histone methyltransferase clr4 to methylated histone H3, to promote the transition from H3K9me2 to H3K9me3.
Subcellular location: Nucleus {ECO:0000269|PubMed:16823372, ECO:0000269|PubMed:26582768}. Chromosome {ECO:0000269|PubMed:26582768}.
Interaction partners:
- 26S proteasome regulatory subunit rpn10
- 26S proteasome regulatory subunit rpn7
- Glycerol-3-phosphate dehydrogenase, mitochondrial
- 26S proteasome regulatory subunit rpn2
- 26S proteasome regulatory subunit rpn1
- Probable 26S proteasome regulatory subunit rpn3
- LIMR family protein C622.11
- Probable 26S proteasome regulatory subunit rpn6
- Probable 26S proteasome regulatory subunit rpn9
- 26S proteasome regulatory subunit rpn12
Sequence:
MKEEASEHGGSADETQELSPVSDSSDEMPNNAKRRRRSQSMIANKRIHQAFQEDEGDEDWEEEEHKPKAKRRYNTRSNESFSEGDDEPFEVSESSALEDELSDSEDSFIRSVRSKPKYKPGTRRSTRLRNRRSQDEEESEEEHRPILRERTSRINYSVPLAFPPVDEMDGDPSSQVNQSRSRKTHSELAITKLLRQQVSSFMPYIDSSGSESESDNTRIKKSSAKTIKALTDPANSGGPPDFGRIREKSDLADSDPLGVDSSLSFESVGGLDNYINQLKEMVMLPLLYPEIFQRFNMQPPRGVLFHGPPGTGKTLMARALAAACSSENKKVSFYMRKGADCLSKWVGEAERQLRLLFEEAKSTQPSIIFFDEIDGLAPVRSSKQEQIHASIVSTLLALMDGMESRGQVIIIGATNRPDAVDPALRRPGRFDREFYFPLPDRDARKKIIEIHTRNWDPPVPEWLCSMLAEKSKGYGGADLRALCTEAALNSIKRTYPQLYRSTKRLQIDPKTIKVKVKDFVMSMKRMIPSSERSSISPSKPLSPELKPLLNEAFQDIEKTLQKLMPVASKLNPLEEVMYDDPKENDFEYQQRLETFETLRIYKPRFLICGRKGLGQTALGPAILQQYEGVHVQSFDMSTLLQDSTQSIETSIIHLFLEVRRHTPSIIYIPDIDNWLNVLPLTAITTFSSMLERLDFSDQILFLALSSSPLSELHPQLREWFSSKQSVYSLQYPTRDSIIAFFQPILELIKASPTELPGGIPRKRRVLPELPLAPDPPPFTSQKITLKQTKQADMRLLNKLKIKLNALLGSLRARYRKFKKPLIDFNDIYCVDPETGHSYRSREECHYEFVDDVVKQIGSDQKFSMMSLEEIEKRTWDNCYCTPKQFVHDIKLILRDALQLEDSETIKRAQEMYANVLLGVEDMEDDQFSQRCERMALREAERRKLRHGKLQKHLDETKADMQFTSEKPSVDESITEVDDAIKDGPPVLAETLTNSLMEDVGPENVDMDIEDNEIFTNQSTMSVPSMLVENEESPKPDEYIDQKDKVQSPLLNGKSPVGVPSEAALRVSTDVSTNISSNGRADIPVDTLITSPADVPNNAPTDAHNITSADGHIENIEQEVVFPDLVFDEDRLTPLKQLLIDSTTGFTVDQLLHLHSFLYQIIWNTKSEWNRNSVVDECERAVKEFMINALQ
Protein: Zinc finger protein 418 (Q8TF45)
Organism: Homo sapiens (Human)
Function: Transcriptional repressor.
Subcellular location: Nucleus {ECO:0000269|PubMed:18084723}.
Interaction partners:
Sequence:
MQGTVAFEDVAVNFSQEEWSLLSEVQRCLYHDVMLENWVLISSLGCWCGSEDEEAPSKKSISIQRVSQVSTPGAGVSPKKAHSCEMCGAILGDILHLADHQGTHHKQKLHRCEAWGNKLYDSSNRPHQNQYLGEKPYRSSVEEALFVKRCKFHVSEESSIFIQSGKDFLPSSGLLLQEATHTGEKSNSKPECESPFQWGDTHYSCGECMKHSSTKHVFVQQQRLPSREECYCWECGKSFSKYDSVSNHQRVHTGKRPYECGECGKSFSHKGSLVQHQRVHTGKRPYECGECGKSFSHKGSLVQHQRVHTGERPYECGECGKSFSQNGTLIKHQRVHTGERPYECEECGKCFTQKGNLIQHQRGHTSERPYECEECGKCFSQKGTLTEHHRVHTRERPYECGECGKSFSRKGHLRNHQRGHTGERPYECGECGKSFSRKGNLIQHQRSHTGERPYECRECRKLFRGKSHLIEHQRVHTGERPYECNECGKSFQDSSGFRVHQRVHTGEKPFECSECGKSFPQSCSLLRHRRVHTGERPYECGECGKSFHQSSSLLRHQKTHTAERPYECRECGKFFSSLLEHRRVHTGERPYECRECGKTFTRRSAHFKHQRLHTRGKPYECSECGKSFAETFSLTEHRRVHTGERPYECSECGKSFHRSSSLLRHQRVHTERSPYK
Protein: Protein Flattop (Cilia- and flagella-associated protein 126) (Q6P8X9)
Organism: Mus musculus (Mouse)
Function: Acts as a regulator of cilium basal body docking and positioning in mono- and multiciliated cells. Regulates basal body docking and cilia formation in multiciliated lung cells. Regulates kinocilium positioning and stereocilia bundle morphogenesis in the inner ear.
Subcellular location: Cytoplasm, cytoskeleton, cilium basal body {ECO:0000269|PubMed:25296022}. Cytoplasm, cytoskeleton, cilium axoneme {ECO:0000269|PubMed:25296022}. Cytoplasm, cytoskeleton, flagellum axoneme {ECO:0000269|PubMed:37295417, ECO:0000269|PubMed:37865089, ECO:0000269|PubMed:37989994}. Apical cell membrane {ECO:0000269|PubMed:25296022}. Note=Localizes to the apical cell membrane, the basal body and the primary cilium in monociliated node cells. {ECO:0000250|UniProtKB:Q3SZT6, ECO:0000269|PubMed:25296022}.
Interaction partners:
- Tektin-1
- Sperm-associated antigen 8
- Cilia- and flagella-associated protein 45
- Tektin-4
- WD repeat-containing protein 90
- EF-hand domain-containing protein 1
- Cilia- and flagella-associated protein 276
- Cilia- and flagella-associated protein 52
- Cilia- and flagella-associated protein 161
- Dynein light chain roadblock-type 2
Sequence:
MATNYSANQYEKAYLPTYLQNWSPARPTKEKIAAHEGYTQIIANDRGHLLPSVPRSKASPWGSFMGTWQMPLKIPPAKVTLTARTTTAADNLTKWIHKNPDLLNACNGLRPEISGKPFDPDSQTKQKKSVTKTVQQAPNPTIIPSSPVIQGDNPDEPQSSHPSAGHTPGPQTPVNSPNNPPPSPCKSTK
Protein: Acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12) (H0YDD4)
Organism: Homo sapiens (Human)
Subcellular location: Mitochondrion matrix {ECO:0000256|ARBA:ARBA00004305}.
Interaction partners:
Sequence:
MWRVCARRAQNVAPWAGLEARWTALQEVPGTPRVTSRSGPAPARRNSVTTGYGGVRALCGWTPSSGATPRNRLLLQLLGSPGRRYYSLPPHQKVPLPSLSPTMQAGTIARWEKKEGDKINEGDLLAEIETDKATIGFEVQEEGYLAKILVPEGTRDVPLGTPLCIIVEKEADISAFADYRPTEVTDLKPQVPPPTPPPVAAVPPTPQPLAPTPSAPCPATPAGPKGRVFVSPLAKKLAVEKGIDLTQVKGTGPDGRITKKDIDSFVPSKVAPAPAAVVPPTGPGMAPVPTGVFTDIPISNIRRVIAQRLMQSKQTIPHYYLSIDVNMGEVLLVRKELNKILEGRSKISVNDFIIKASALACLKVPEANSSWMDTVIRQNHVVDVSVAVSTPAGLITPIVFNAHIKGVETIANDVVSLATKAREGKLQPHEFQGGTFTISNLGMFGIKNFSAIINPPQACILAIGASEDKLVPADNEKGFDVASMMSVTLSCDHRVVDGAVGAQWLAEFRKYLEKPITMLL
Protein: DNA repair protein RecN (Recombination protein N) (P17894)
Organism: Bacillus subtilis (strain 168)
Function: Involved in recombinational repair of damaged DNA. Seems to be the first protein recruited to repair centers, foci that are the site of double-strand DNA break(s), followed by RecO and then RecF.
Subcellular location: Cytoplasm, nucleoid {ECO:0000269|PubMed:15186413, ECO:0000269|PubMed:16385024}. Note=Cytoplasmically located in untreated cells. Recruited to foci following treatment with DNA damaging agents; these foci are presumably the breaks themselves. They are almost always located within nucleoids.
Interaction partners:
- Protein RecA
- Single-stranded-DNA-specific exonuclease RecJ
- DNA replication and repair protein RecF
- LexA repressor
- DNA repair protein RecO
- Recombination protein RecR
- ATP-dependent DNA helicase RecG
- Probable ATP-dependent DNA helicase RecS
- Holliday junction branch migration complex subunit RuvA
- UvrABC system protein A
Sequence:
MLAELSIKNFAIIEELTVSFERGLTVLTGETGAGKSIIIDAISLLVGGRGSSEFVRYGEAKAELEGLFLLESGHPVLGVCAEQGIDVSDEMIVMRRDISTSGKSVCRVNGKLVTIASLREIGRLLLDIHGQHDNQLLMEDENHLQLLDKFAGAEVESALKTYQEGYQRYVKLLKKLKQLSESEQEMAHRLDLIQFQLEEIESAKLELNEDEQLQEERQQISNFEKIYESLQNAYNALRSEQGGLDWVGMASAQLEDISDINEPLKKMSESVSNSYYLLEDATFQMRNMLDELEFDPERLNYIETRLNEIKQLKRKYGATVEDILEYASKIEEEIDQIENRDSHLQSLKKELDSVGKDVAVEAANVSQIRKTWAKKLADEIHRELKSLYMEKSTFDTEFKVRTASRNEEAPLVNGQPVQLTEQGIDLVKFLISTNTGEPLKSLSKVASGGELSRVMLAIKSIFSSQQDVTSIIFDEVDTGVSGRVAQAIAEKIHKVSIGSQVLCITHLPQVAAMADTHLYIAKELKDGRTTTRVKPLSKQEKVAEIGRMIAGVEVTDLTKRHAKELLKQADQVKTTG
Protein: N-acetylmannosamine kinase (EC 2.7.1.60) (ManNAc kinase) (N-acetyl-D-mannosamine kinase) (P45425)
Organism: Escherichia coli (strain K12)
Function: Catalyzes the phosphorylation of N-acetylmannosamine (ManNAc) to ManNAc-6-P. Has also low level glucokinase activity in vitro.
Interaction partners:
- Putative N-acetylmannosamine-6-phosphate 2-epimerase
- N-acetylneuraminate lyase
- N-acetylneuraminate anomerase NanQ
- Sialic acid transporter NanT
- D-allose kinase
- Glucosamine-6-phosphate deaminase
- HTH-type transcriptional repressor NanR
- N-acetylglucosamine-6-phosphate deacetylase
- N-acetylneuraminate epimerase
- N-acetylneuraminic acid outer membrane channel protein NanC
Sequence:
MTTLAIDIGGTKLAAALIGADGQIRDRRELPTPASQTPEALRDALSALVSPLQAHAQRVAIASTGIIRDGSLLALNPHNLGGLLHFPLVKTLEQLTNLPTIAINDAQAAAWAEFQALDGDITDMVFITVSTGVGGGVVSGCKLLTGPGGLAGHIGHTLADPHGPVCGCGRTGCVEAIASGRGIAAAAQGELAGADAKTIFTRAGQGDEQAQQLIHRSARTLARLIADIKATTDCQCVVVGGSVGLAEGYLALVETYLAQEPAAFHVDLLAAHYRHDAGLLGAALLAQGEKL
Protein: Protein TIC 55, chloroplastic (Translocon at the inner envelope membrane of chloroplasts 55) (AtTIC55) (Translocon at the inner envelope membrane of chloroplasts 55-II) (Q9SK50)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Involved in protein precursor import into chloroplasts. Part of the redox regulon consisting of TIC32, TIC 55 and TIC62.
Subcellular location: Plastid, chloroplast inner membrane {ECO:0000269|PubMed:19995737}; Multi-pass membrane protein {ECO:0000269|PubMed:19995737}.
Interaction partners:
- Short-chain dehydrogenase TIC 32, chloroplastic
- Protein TIC 62, chloroplastic
- Protein TIC 22, chloroplastic
- Protein TIC 40, chloroplastic
- Protein TIC110, chloroplastic
- Protein TOC75-3, chloroplastic
- Protein TIC 21, chloroplastic
- Translocase of chloroplast 159, chloroplastic
- Translocase of chloroplast 34, chloroplastic
- Rieske
Sequence:
MAVPFLSSSLQLTPTSPILFTKVTPTPIIHNHRSTCTIPTKPRLRLLRRSAVAGTAVSDQTEGGGDVLLNPEEEKRVEVADYDWTEEWYPLYLTKNVPEDAPLGLTVYDRQIVLYKDGEGTLRCYEDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPASAKIPKAACVKTYEVKDSQGVVWVWMSTKTPPNPEKLPWFENFARPGFFDISTTHELPYDHSILLENLMDPAHVPISHDRTDFTAKREDAQPLVFEVTERSNRGFAGTWGREKEGGKGSNLLRFDAPCVLQNNREFEGKDGVKNYFSGLFLCRPTGQGKSMLIVRFGVTKRSPLVSVLPQWFWHQNACKVFEQDMGFLSSQNEVLMKEKVPTKDLYLNLKSSDTWVAEYRKWMDKVGHGMPYHFGHRTISLPKVPPVVEHAPAGLIAALSASYPAKGGIGTMHAPNLANRYFRHIIHCRSCSNVIKSFELWKNILSATAVALTALAILVVSRQWKAVLLGSAALCSAAAYTCLRAINLNTNNFIRTHRRL
Protein: Mannan endo-1,6-alpha-mannosidase DFG5 (EC 3.2.1.101) (Endo-alpha-1->6-D-mannanase DFG5) (Q05031)
Organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Function: Required for normal synthesis of the cell wall.
Subcellular location: Cell membrane {ECO:0000269|PubMed:12421307}; Lipid-anchor, GPI-anchor {ECO:0000269|PubMed:12421307}. Note=GPI-anchored plasma membrane protein (GPI-PMP).
Interaction partners:
- Mannan endo-1,6-alpha-mannosidase DCW1
- Protein KRE1
- Killer toxin-resistance protein 5
- GTPase-interacting component 1
- Flavin carrier protein 2
- Flavin carrier protein 1
- Cell wall protein CWP1
Sequence:
MIVNISAKMILSICFTFLSFFKATHAMDLDTTSKTSICDATALIQGGMLDYYEGTRYGGTVGMFQSPYYWWHAGEAFGGMLENWFLCENDTYQELLYDALLAQTGSNYDYIPSNQTMVEGNDDQGIWGITVMGAVERNFTDPGDGKPGWLAMVQAVFNTMYSRWDSEHCGGGLRWQIFTWNSGYNYKNTVSNACLFQIAARLGRYTGNTTYLEVAEQVFDWLVDVGYVVLNDTANVFDGAEIDTNCTDITKIEWTYNHGIVLGGLAYMYNATNGTGEWETSLTKILNGAKSYFFKDSIMYESACQDYGTCNTDQRTFKSIFSRMLGLTSVMAPFTRDTIDDLIKTSAEAAAKSCNGGTDGHTCGLNWQKQTNDGYYGLGEQMSALEVIQNLLIHDRPAPYKEDNGGTSKGDANAGMNSSTTNVLQNNLNIKKGDRAGAAIITAVILSVLTGGAVWMLF
Protein: Epididymis secretory sperm binding protein (A0A384NPZ7)
Organism: Homo sapiens (Human)
Interaction partners:
Sequence:
MEPAVSEPMRDQVARTHLTEDTPKVNADIEKVNQNQAKRCTVIGGSGFLGQHMVEQLLARGYAVNVFDIQQGFDNPQVRFFLGDLCSRQDLYPALKGVNTVFHCASPPPSSNNKELFYRVNYIGTKNVIETCKEAGVQKLILTSSASVIFEGVDIKNGTEDLPYAMKPIDYYTETKILQERAVLGANDPEKNFLTTAIRPHGIFGPRDPQLVPILIEAARNGKMKFVIGNGKNLVDFTFVENVVHGHILAAEQLSRDSTLGGKAFHITNDEPIPFWTFLSRILTGLNYEAPKYHIPYWVAYYLALLLSLLVMVISPVIQLQPTFTPMRVALAGTFHYYSCERAKKAMGYQPLVTMDDAMERTVQSFRHLRRVK
Protein: Peptidyl-prolyl cis-trans isomerase FKBP16-3, chloroplastic (PPIase FKBP16-3) (EC 5.2.1.8) (FK506-binding protein 16-3) (AtFKBP16-3) (Immunophilin FKBP16-3) (Rotamase) (O22870)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides (By similarity).
Subcellular location: Plastid, chloroplast thylakoid lumen {ECO:0000269|PubMed:11719511, ECO:0000269|PubMed:11826309}.
Interaction partners:
- Peptidyl-prolyl cis-trans isomerase FKBP20-1
- Peptidyl-prolyl cis-trans isomerase FKBP16-1, chloroplastic
- Protein THYLAKOID FORMATION 1
- Peptidyl-prolyl cis-trans isomerase CYP38, chloroplastic
- CBBY-like protein
- Photosystem I reaction center subunit XI, chloroplastic
- APO protein 2, chloroplastic
- Peptidyl-prolyl cis-trans isomerase FKBP18, chloroplastic
- Peptidyl-prolyl cis-trans isomerase CYP37, chloroplastic
- 5-amino-6-
Sequence:
MAASSPSLLLPLGSASRNGLTTKNPNSSRYIAARVIASETREQSCKISNLSSRREAMLLVLGVSGGLSMSSLAAYAAGLPPEDKPRLCEAECEKELENVPMVTTESGLQYKDIKVGRGPSPPVGFQVAANYVAMVPSGQIFDSSLEKGLPYLFRVGSGQVIKGLDEGILSMKAGGKRRLYIPGPLAFPKGLVSAPGRPRVAPNSPVIFDVSLEFIPGLDSEEE
Protein: Murein hydrolase activator NlpD (P0ADA3)
Organism: Escherichia coli (strain K12)
Function: Activator of the cell wall hydrolase AmiC. Required for septal murein cleavage and daughter cell separation during cell division.
Subcellular location: Cell inner membrane {ECO:0000305}; Lipid-anchor {ECO:0000255|PROSITE-ProRule:PRU00303}. Note=Localizes at the septal ring. {ECO:0000269|PubMed:19525345}.
Interaction partners:
- N-acetylmuramoyl-L-alanine amidase AmiC
- N-acetylmuramoyl-L-alanine amidase AmiB
- RNA polymerase sigma factor RpoS
- Protein-L-isoaspartate O-methyltransferase
- Cell division protein FtsN
- Signal peptidase I
- Peptidoglycan D,D-transpeptidase FtsI
- Endolytic peptidoglycan transglycosylase RlpA
- Penicillin-binding protein 1B
- RNA polymerase sigma-54 factor
Sequence:
MSAGSPKFTVRRIAALSLVSLWLAGCSDTSNPPAPVSSVNGNAPANTNSGMLITPPPKMGTTSTAQQPQIQPVQQPQIQATQQPQIQPVQPVAQQPVQMENGRIVYNRQYGNIPKGSYSGSTYTVKKGDTLFYIAWITGNDFRDLAQRNNIQAPYALNVGQTLQVGNASGTPITGGNAITQADAAEQGVVIKPAQNSTVAVASQPTITYSESSGEQSANKMLPNNKPTATTVTAPVTVPTASTTEPTVSSTSTSTPISTWRWPTEGKVIETFGASEGGNKGIDIAGSKGQAIIATADGRVVYAGNALRGYGNLIIIKHNDDYLSAYAHNDTMLVREQQEVKAGQKIATMGSTGTSSTRLHFEIRYKGKSVNPLRYLPQR
Protein: Interferon-induced protein with tetratricopeptide repeats 3, isoform CRA_a (Interferon-induced protein with tetratricopeptide repeats 3, isoform CRA_b) (cDNA FLJ75638, highly similar to Homo sapiens interferon-induced protein with tetratricopeptide repeats 3 (IFIT3), mRNA) (Q5T765)
Organism: Homo sapiens (Human)
Interaction partners:
Sequence:
MSEVTKNSLEKILPQLKCHFTWNLFKEDSVSRDLEDRVCNQIEFLNTEFKATMYNLLAYIKHLDGNNEAALECLRQAEELIQQEHADQAEIRSLVTWGNYAWVYYHLGRLSDAQIYVDKVKQTCKKFSNPYSIEYSELDCEEGWTQLKCGRNERAKVCFEKALEEKPNNPEFSSGLAIAMYHLDNHPEKQFSTDVLKQAIELSPDNQYVKVLLGLKLQKMNKEAEGEQFVEEALEKSPCQTDVLRSAAKFYRRKGDLDKAIELFQRVLESTPNNGYLYHQIGCCYKAKVRQMQNTGESEASGNKEMIEALKQYAMDYSNKALEKGLNPLNAYSDLAEFLETECYQTPFNKEVPDAEKQQSHQRYCNLQKYNGKSEDTAVQHGLEGLSISKKSTDKEEIKDQPQNVSENLLPQNAPNYWYLQGLIHKQNGDLLQAAKCYEKELGRLLRDAPSGIGSIFLSASELEDGSEEMGQGAVSSSPRELLSNSEQLN
Protein: Estradiol 17-beta-dehydrogenase 1 (EC 1.1.1.62) (Hydroxysteroid (17-beta) dehydrogenase 1) (F1QUP2)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Interaction partners:
- Aromatase
- 3-keto-steroid reductase/17-beta-hydroxysteroid dehydrogenase 7
- FabG like.
- Very-long-chain 3-oxoacyl-CoA reductase-A
- Hydroxysteroid
- Very-long-chain 3-oxoacyl-CoA reductase-B
- Cytochrome P450 1A
- 20beta-hydroxysteroid dehydrogenase type 2
- Cytochrome P450 1A
- Cytochrome P450, family 3, subfamily A, polypeptide 65
Sequence:
MEQKVVLITGCSSGIGLSLAVHLASNPAKAYKVYATMRNLDKKQRLLESVRGLHKDTLDILQMDVTDQQSILDAQRNVSEGRIDILVCNAGVGLMGPLETHSLDTIRAILDVNLLGTIRTIQTFLPDMKKKRHGRILVTGSMGGLQGLPFNEVYCASKFAIEGACESLAILLQHFNIHISLIECGPVNTDFLMNLKRTEPGDKVLEVDAHTRSLYDQYLQHCQSVFQNAAQDTEDIIQVYLEAMEAQTPFLRYYTNRALLPMSSLKLTSMDGSQYIRAMSKLIFSSPGTDAQK
Protein: Zinc finger protein 385C (E9QJ33)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Subcellular location: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
Interaction partners:
Sequence:
MLIGTAAQGSPLLASLPMQGRPLQTPLDLKHFLPFRLSGSSPLSLFPNFNNMDPVQKAVINHTFGVPQSLKKKQVISCNICHLRFNSTNQAEAHYKGHKHARKLKALEAQKNKQQRRQQDNSHHNREREKDRERDKERERVKASAPDPPPALLDDTAIEGTAVSDPESALRVDDAHCSSVVLTPISEVSSADLCASSPHSQHPDALLEPSGDTSPPPQDSPAADTPAEKEPKKSKQHLHCPICKVTVNSSIQMEAHNSGTKHKLMMDGQSVLPRRRGKAMSSRPSCKSKRLASKGSLGVASKSFYCEVCEIHVNSETQLSQHMNSRRHKDRLAGKPPKPKFNPHAKSQPTSTVSGVRWNGYAGGAVSAMKKVISQCNLSSLSSQTKLVLQKQLTKNLTASFLPTPLTPPTLCTVAANPLALRHPPGTTFIQTPILGPALFRPAPGPLRATHTPIIFSPY
Protein: Syntaxin, Qa-SNARE family (Q8IE08)
Organism: Plasmodium falciparum (isolate 3D7)
Subcellular location: Membrane {ECO:0000256|ARBA:ARBA00004211}; Single-pass type IV membrane protein {ECO:0000256|ARBA:ARBA00004211}.
Interaction partners:
- Protein transport protein BOS1, putative
- BET1-like protein, putative
- Protein transport protein SEC22
- Sec1 family protein, putative
- SNARE protein, putative
- Alpha-soluble NSF attachment protein, putative
- Syntaxin, Qa-SNARE family
- SNARE protein
- SNARE protein, putative
- Syntaxin-6, putative
Sequence:
MPYVDKTEEFFKIIEKLSNDNINIRKNRSIVQDTQVGELASKITDLLQSGYQKLQQLERCVKQKGIFNDKTSEIEELTYEVKQTITDVTNELDLLVQYSCNLNISNPQSKTHIDNIISSLKNRLFDFTKKFKDVLQIRSEHIKKQVNRRKMYSYTSNEATFNNDNYKFTPLGDIDIESGQQQVLKQPSKHSYLHSRADAMENIQKVIGDLAQMFQKVATMVTQQDEMIKRIDEDIDISLTNTREGQNYLLTYFNRLTSTRTLILQIFACIFILIVFFVIFS
Protein: DEAD-box ATP-dependent RNA helicase 9, mitochondrial (EC 3.6.4.13) (Q9LUW6)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Subcellular location: Mitochondrion {ECO:0000305|PubMed:25732537}.
Interaction partners:
- Pescadillo homolog
- Pentatricopeptide repeat-containing protein At2g27800
- DExH-box ATP-dependent RNA helicase DExH10
- Pentatricopeptide repeat-containing protein At3g18970
- Probable rRNA-processing protein EBP2 homolog
- Pentatricopeptide repeat-containing protein At1g02370
- Protein STRICTOSIDINE SYNTHASE-LIKE 8
- Protein kinase superfamily protein
- Probable UDP-arabinopyranose mutase 4
- Ribosome biogenesis protein WDR12 homolog
Sequence:
MISTVLRRSILGTSRRTLAASVTSINAALFHNLAPAAATVSDLANGATNVKSLPSNSSPFGVKVRDFHVKSVPSEFRSSIVSSAGFAAQEYAPSYENDGGIGDSESVGSSGGGDGLAIADLGISPEIVKALKGRGIEKLFPIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIPIIDKIIKFNAKHGRGKNPQCLVLAPTRELARQVEKEFRESAPSLDTICLYGGTPIGQQMRELNYGIDVAVGTPGRIIDLMKRGALNLSEVQFVVLDEADQMLQVGFAEDVEIILQKLPAKRQSMMFSATMPSWIRSLTKKYLNNPLTIDLVGDSDQKLADGITMYSIAADSYGRASIIGPLVKEHGKGGKCIVFTQTKRDADRLAFGLAKSYKCEALHGDISQAQRERTLAGFRDGNFSILVATDVAARGLDVPNVDLVIHYELPNNTETFVHRTGRTGRAGKKGSAILIHGQDQTRAVKMIEKEVGSRFNELPSIAVERGSASMFEGVGARSGGSFGGGRSGGGGYGSYGSSSGRSGGGSYGGYGGSSGRSGGGGGSYGGSGGSSSRYSGGSDRSSGFGSFGSGGSSGGFGSDRSSQSSGRSSFGGFGSNDGKRSY
Protein: non-specific serine/threonine protein kinase (EC 2.7.11.1) (Q24496)
Organism: Drosophila melanogaster (Fruit fly)
Interaction partners:
Sequence:
MPLADSQKDLRQQPQQQQQQHVSSTSSSNNAEQQCSSSGLGLQLRQRMQITSSGCSSLAVTPMEHTPTEDEESGGGNSGVTSSVTTVTSSQRRQQLQQVQQQSALQAALEQHHISPTADLDSARKRPTHRTLCPPPELMELSDSESQGGVETGGRREGATGRSAPDLEDTEPLYETENEFELKEVIKEGHDKADPSQFELLRVLGEGSFGKVFLVRKIIGKDAGTLYAMKVLKKATLKVKDRVRSTNERKILADVGHAFIVRLHYAFQTPGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALAMNHLHTLGIIYRDLKPENILLDEHGHIALTDFGLSKQPLDGSKTYSFCGTVEYMAPEIVNRKGHDFAADWWSFGVLMYEMLTGNLPFHGQTRQETMNQILRSKLGMPENLSPEAQSLLRALFKRNPQNRLGAGAQGILDIKAHCFFATIDWVRLERKQVRPPFIPAVSRDDAFYFDVEYTSKSPRDSPGGPISASAHEIFRGFSFVAPVLLEGQCAGSNMCSTSASPLHSIAPIPAAPVGAPRTLPGVLPGNFHAEYNLLQELGRGTFSVCRLCEHRASKKHYAVKVIEKAAVAAASTSTSADCWEEVEIMLRYGNHPNIVTLYSVYEDAGSAYLVMELLKGGELLDRILAVGQMCESEASAVLRTIASAVAYLHEHGVVHRDLKPSNMIYASMRQTPETLKLCDLGFAKQLRADNGLLMTPCYTANFVAPEVLKRQGYDLACDIWSLGVLLYIMLSGRTPFASTPNDSPDVILKRIGSGQIDFTSSRWALISVPAKELLRQMLHIVPENRPTAARILEHDWLREQFAGGVQLTEYAVAPGSQLSLCAQQQQQNHISMALRGAVDATFRAIAIPQAANVGPVELSMLAKRRAKDRANLHS
Protein: Neuregulin 1 (A0A494C1G2)
Organism: Homo sapiens (Human)
Subcellular location: Cell membrane {ECO:0000256|ARBA:ARBA00004251}; Single-pass type I membrane protein {ECO:0000256|ARBA:ARBA00004251}. Secreted {ECO:0000256|ARBA:ARBA00004613}.
Interaction partners:
Sequence:
XSFPPLETGRNLKKEVSRVLCKRCALPPRLKEMKSQESAAGSKLVLRCETSSEYSSLRFKWFKNGNELNRKNKPQNIKIQKKPGKSELRINKASLADSGEYMCKVISKLGNDSASANITIVESNATSTSTTGTSHLVKCAEKEKTFCVNGGECFMVKDLSNPSRYLCKGGGAVPEESADHNRHLHRPPCGRHHVCGGLLQNQQYVSKNVISSEHIVEREAETSFSTSHYTSTAHHSTTVTQTPSHSWSNGHTESILSESHSVIVMSSVENSRHSSPTGGPRGRLNGTGGPRECNSFLRHARETPDSYRDSPHSERREKPMGQQILIELAEKDLYFFLAVHLFSNKNPGCLCDDSGRGGFVHSQEEIGPPYLPFGCREYEQTSLRPKN
Protein: Myelin protein P0 precursor (Myelin protein zero) (Q8JFG6)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Subcellular location: Membrane {ECO:0000256|ARBA:ARBA00004479}; Single-pass type I membrane protein {ECO:0000256|ARBA:ARBA00004479}.
Interaction partners:
- Myelin protein zero-like 1 like
- DMalpha2b
- DMalpha1
- SH3 domain and tetratricopeptide repeat-containing protein 2 isoform X5
- Early growth response protein 2b
- Ganglioside-induced differentiation-associated protein 1.
- BR serine/threonine kinase 2b.
- Transcription factor SOX-10
Sequence:
MLSVLALTSVVLLGIASQSTALVVNTDSEKHALVGSDVRLSCSFFSWQWTSPEVSFTWHYRPDGAKDAISIFHYGGGEAYPANKGPFQNRLEFVGNPSRRDGSILIKNLDFGDNGTFTCDAKNPPDIGGHPSTIRLLVFEKVPVQAGVITGSIIGVVLGLLILVVAIYYLMRFLVARRVFSLSMSKHGKKGKGKEGSQQKQRI
Protein: Prolyl 4-hydroxylase, transmembrane (endoplasmic reticulum) (Transmembrane prolyl 4-hydroxylase) (X1WG80)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Interaction partners:
Sequence:
MLSGKMMEPQDDIEEDDSPSASAPPSSSPSPSSSPPPRALPRQRTSLQKSSVCSRSYFMVVMVFFHVYIINVIALLLYVHYNNGSNAISANRDFTSSDSSSHKVTGASDAQATADSGFPRNMFLPRIEGIRVGHVQKVSLVSGKVHEMKTLSLKPLLFEIPDFLSEEECAVVVRLAQLKGLMESQVMVPEGQEELDQQLNLSPEEIFNFLDLNQDGQLQPHEILTHSRVRDGIWLTSENLKEIYDGLKADLDGNGLLSLEEFGRLRSDAFQRFLLQRGVERSQLVRNSRHTWLYQGQGAHQVLQDLRKRVTLLTRLPSSLVELSEPLQVVRYEQGGHYHAHHDSGPVYPETACTHTRLAANTTSPFQTSCRYITVLFYLNNVQEGGETTFPVADNRTYEEASLIQNDVDLLDTRKHCDKGNLRVKPVKGTAVFWYNYLSDGRGWVGEQDEYSLHGGCVVTQGTKWVANNWINVDPDYQRQARYQLLVSQQESQEQEEPNSDQHIEAHQDL
Protein: Vesicle-associated membrane protein 2 (VAMP-2) (Synaptobrevin-2) (P63045)
Organism: Rattus norvegicus (Rat)
Function: Involved in the targeting and/or fusion of transport vesicles to their target membrane (By similarity). Major SNARE protein of synaptic vesicles which mediates fusion of synaptic vesicles to release neurotransmitters. Essential for fast vesicular exocytosis and activity-dependent neurotransmitter release as well as fast endocytosis that mediates rapid reuse of synaptic vesicles (Probable). Modulates the gating characteristics of the delayed rectifier voltage-dependent potassium channel KCNB1.
Subcellular location: Cytoplasmic vesicle, secretory vesicle, synaptic vesicle membrane {ECO:0000250|UniProtKB:P63027}; Single-pass type IV membrane protein {ECO:0000255}. Cell membrane {ECO:0000269|PubMed:19690160}. Note=Colocalizes with PRKCZ and WDFY2 in intracellular vesicles. {ECO:0000250|UniProtKB:P63027}.
Interaction partners:
- Syntaxin-4
- Multifunctional fusion protein
- Syntaxin-1A
- Synaptosomal-associated protein 23
- Alpha-soluble NSF attachment protein
- Syntaxin-3
- Synaptophysin
- Synaptotagmin-1
- Syntaxin-1B
- Syntaxin-2
Sequence:
MSATAATVPPAAPAGEGGPPAPPPNLTSNRRLQQTQAQVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFETSAAKLKRKYWWKNLKMMIILGVICAIILIIIIVYFST
Protein: Probable diguanylate cyclase DgcF (DGC) (EC 2.7.7.65) (P76147)
Organism: Escherichia coli (strain K12)
Function: Catalyzes the synthesis of cyclic-di-GMP (c-di-GMP) via the condensation of 2 GTP molecules.
Subcellular location: Cell membrane {ECO:0000305}; Multi-pass membrane protein {ECO:0000255}.
Interaction partners:
- Cyclic di-GMP phosphodiesterase PdeL
- Blue light- and temperature-regulated antirepressor BluF
- Cyclic di-GMP phosphodiesterase PdeF
- Probable cyclic di-GMP phosphodiesterase PdeG
- Probable cyclic di-GMP phosphodiesterase PdeK
- Cyclic di-GMP phosphodiesterase PdeH
- Probable cyclic di-GMP phosphodiesterase PdeI
- Probable cyclic di-GMP phosphodiesterase PdeC
- Probable cyclic di-GMP phosphodiesterase PdeB
- Probable cyclic di-GMP phosphodiesterase PdeD
Sequence:
MLADWFSEQFSTGVLIVPCMLTLAIPGVLPRFKAEQMMPAIALIVSVIASVVIGGAGSLAFPLPALIWCAVRYTPQVTCLLTFVTGAVEIVLVANSVIDISVGSPFSIPQMFSARLGIATMAICPIMVSFSVAAINSLMKQVALRADFDFLTQVYSRSGLYEALKSPSLKQTQHLTVMLLDIDYFKSINDNYGHECGDKVLSVFARHIQKIVGDKGLVARMGGEEFAVAVPSVNPVDGLLMAEKIRKGVELQPFTWQQKTLYLTVSIGVGSGRASYLTLTDDFNKLMVEADTCLYRSKKDGRNRTSTMRYGEEVV
Protein: Pentacotripeptide-repeat region of PRORP domain-containing protein (Q38CF9)
Organism: Trypanosoma brucei brucei (strain 927/4 GUTat10.1)
Interaction partners:
Sequence:
MGAEKKINRPTNSGEVAENVGAFTEVMVPVWSRLCDKVIAAYKAGEDIVVLQHFEELRATPELDVIAHDSLISAAPDLTVGAVEKKEDDRAAKKERLEYCWGRALLSARHLAGDDDEHINSIVESFEQQFGCVSGYLRALAINAESALEVLQLYQMMEGPVTTRVATAALHRFLTNDASEVSGLLQFLKLNNVPLTREFHDQLEKNFVMRMKTEDAEEVFKDMRNAGVEPVSTHPYNFIFMKTPPFKYMDLLDYYEDMLDRGIVPMNSTFRILSRQTQNGGLVNQHFSALARGTTTGSDRRHETEGHGGTQAFFATRLEELARLKSSTTLDDALRVLRRMDVEGTPLISGSVVLNVLLSVFCRAGHIEDTERVLQLAKERGCTPNGATLSRVLKKSNADRFLQAELILPDALEAGDVRLSDITDVMCHFFNNGMRSQVVRILRAYVVRCYRNPTESIPHTVALWALRLGPFDWALGFLAILLASNDEPLSDRIQRRMHEVVKENRSREILKVLEGHKWDRRSILLAPQLQEPTNSSDGAGEVNGRSSEGGNSGGGHHRRDMGPSWMSAMHLVLKEMGVEKEVLMGYKAKLSALINDAKKKRDN