wanglab/gogpt-training-data huggingface dataset:
Protein: Phosphatidylethanolamine N-methyltransferase (PE methyltransferase) (PEAMT) (PEMT) (EC 2.1.1.17) (O74787)
Organism: Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Function: Catalyzes the first step of the methylation pathway of phosphatidylcholine biosynthesis, the SAM-dependent methylation of phosphatidylethanolamine (PE) to phosphatidylmonomethylethanolamine (PMME).
Subcellular location: Endoplasmic reticulum membrane {ECO:0000255|HAMAP-Rule:MF_03217, ECO:0000269|PubMed:16823372}; Multi-pass membrane protein {ECO:0000255|HAMAP-Rule:MF_03217}.
Interaction partners:
- Phosphatidyl-N-methylethanolamine N-methyltransferase
- Phosphatidylserine decarboxylase proenzyme 1, mitochondrial
- Phosphatidylserine decarboxylase proenzyme 2, mitochondrial
- Phosphatidylserine decarboxylase proenzyme 3
- Uncharacterized CDP-alcohol phosphatidyltransferase class-I family protein C22A12.10
- Lysophospholipid acyltransferase
- Phospholipase D1
- CDP-diacylglycerol--serine O-phosphatidyltransferase
- Triacylglycerol lipase ptl3
- CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
Sequence:
MTNQIPSASSAADFGSSKSTSVDAVPNMDKSSSVRRKNIDSNGLQQTNQIEQAESSLNAEADHSEPERYGCTPSGKVFLLPKEQENRRSILETVDPRFSKTPWDWIVISSILAQVLLFFMTTGAVRRYSMMLCFFFWRISYDAGIGFLLHMQSNHRKVVTWISDFGFFDKENHPKLYDLTKKQLISKMDSSYNYDTSPLEFNSWLVFRHFVDLILMCDFCSYILMGLAWTCWPKVNIILQFLRIFGGIALIVFNYWVKMDAHRVVRDYAWYWGDFFFLLRSSLVFNGVFELAPHPMYSVGYAGYYGMSLLTGSYAVLFASILAHAAQFGFLLFVENPHIERTYGTDINHARLSPRGEDNEFELPPEHDLVGFVNFDFTRISDVALLIIALYSIFIILLSSNSHYSQFWAIFQAFVWRFLHSIIHAFILFYQSKSKAWTKHFIRNGESAAYAWSQWKGLYNLTLNMSYISFVMAAWKLYHLPSNWTYGLVSLRHALGFGLIALHIYTSVSIYEDLGQYGWFYGDFFLPSRSPKLVYQGIYRYVNNPERFLGCSAYWGLALISSSAWIFLIAILAQLSNLAIIRLVEQPHMQKVYGNTLRKEAGISKLIKQATSEKGNILPKTVETHMKALTTSVDKVLDQTAEALEEFVNTAPPKVQELLKGTESNLRKNAQLAILKLFAPQLSSSTHFDYKLEIKGIDNNQVLLGHPITVCWTASPNHEINDWIGLYKLSDNASDLYTQTSSEGRWSAIDANGYTSHCSSIKSLSNDKNSGEVEFSGDLLFWETGTFEFRYHYGGKHLVMAKTEPFVITATSMNTTDVDEVSAYLLKSIKFCDPNITPHDGDASLCDISEGSARKLTSIIKYSFGIDLSYRVVQVDGSCSALSRRIVNSLKILQSFDGPSGAKDD
Protein: GLI family zinc finger 2 (A0A8I6AWR3)
Organism: Rattus norvegicus (Rat)
Subcellular location: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
Interaction partners:
Sequence:
MRHQEGRYHYDPHPVHGVHGPPTLSGSPVISDISLIRLSPHPAGPGESPFSAHHPYMNPHMEHYLRSVHSSPTLSMISAARGLSPADVAHEHLKERGLFSLAAPGTNPSDYYHQMTLMASHPTPYGDILMQSGGAASAPHLHDYLNPVDASRFSSPRVTPRLSRKRALSISPLSDASLDLQRMIRTSPNSLVAYINNSRSSSAASGSYGHLSAGALSPAFTFPHPINPVAYQQILSQQRGLGSAFGHTPPLIQPSPTFLAQQPMTLTSITVPTQLGSNSSNCISDANQNKQNSESAVSSTVNPITIHKRSKVKTEAEGLRPASPLGLTQEQLADLKEDLDRDDCKQEAEVVIYETNCHWADCTKEYDTQEQLVHHINNEHIHGEKKEFVCRWQACTREQKPFKAQYMLVVHMRRHTGEKPHKCTFEGCSKAYSRLENLKTHLRSHTGEKPYVCEHEGCNKAFSNASDRAKHQNRTHSNEKPYICKIPGCTKRYTDPSSLRKHVKTVHGPDAHVTKKQRNDVHLRAPLLKENGDNEAGAEPGGRGPEESVEASSTSHTAEDCLHIKAIKTESSGSSPGAQSSCSSEPSPLGSVPNNDSGVEMPGTGPGSLGDLTALDDTSPGADTSALAVPSTGGLQLRKHMTTMHRFEQLKREKLKSLKDSCSWAGPAPHTRNTKLPPLPVNGSVLENFNNTGGCGPAGLLPNQRLPELTEVTMLSQLQERRDSSTSTMSSAYTVSRRSSGISPYFSSRRSSEASPLGGIRPHNASSADSYDPISTDASRRSSEASQCSGGGPGLLNLTPAQQYSLRAKYAAATGGPPPTPLPGLDRVSLRTRLALLDAPERALPGACPQPLGPRRGSDGPTYNHGHGYVGAAPALPHEGPNGSTRRASDPVRRPDPLVLPRVQRFHSIHNMNPGPLPPCTDRRGLHLQSHPSVDGSLTRHAYSPRPPSINENVVMEAVAAGVEGAGLESDLGLVEDDLVLPDDVVQYIKAHTGGALDDSTRQVYPTEGTGFPENSKLPSPGLQGHRRLAAADSNMSPSAPGLGGCQLSYSPSSSLNKSNMPVQWNEVSSGTVDALPTQVKPPSFPQSNLVQQKPAFAHYPGYSPQALQSGSGGLDSTQPHLQLRGAPSASRGSYTQQPRLPATGSQCLGVTAAMSPQANYSQTHHQLSPNVVSGSLNQFAPSCSNMAAKPSHLGLPQQMEVVPNATIISGHQRELGIASSSLAAVSQPHPVLGYPQQDGYQQVSGLPSSHQPSFMESQQNTGFGLMQPRPPLEPNTASRHRGVRSGQQQQQLYARTAGQAVVTSANQETAEAMPKGTAGTVVSLTPQPSQDTGRSQDQNTLYYYGQIHMYEQNGGCPAMQPQPPQPQGCSDNIQPEPLPSPGVNQVSSTVDSQLLEPPQIDFDAIMDDGDHSSLFSGALSPSLLHNLSQNSSRLTTPRNSLTLPSIPVGISNMAVGDMSSMLTSLAEENKFLNMMT
Protein: Protein SPEAR1 (SPL-like, EAR-containing protein 1) (TCP interactor containing EAR motif protein 2) (Q84X40)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Adapter-like transcriptional repressor recruiting TPL/TPR corepressors to inhibit TCP transcription factors.
Interaction partners:
- Protein SPEAR4
- Protein SPEAR2
- Homeobox-leucine zipper protein ATHB-21
- UDP-galactose/UDP-glucose transporter 7
- Synaptotagmin-2
- Homeobox-leucine zipper protein ATHB-53
- Homeobox-leucine zipper protein ATHB-40
- Vacuolar-sorting receptor 6
- Transcription factor TCP18
Sequence:
MGSTFFGRPNVVGSSPPSSSPTSSSSSPATRRGKKNGSEKPKQPQRGLGVAQLEKIRLHGEMSCNSFNSYNPSLYPQEDVRMQGGYSSIPSQSSAPYGFYPNMMMGVHRDQYDRATMSWNPSYGILESQHSLEPNITRHFLNEDPSSTTRRSKSLGSGIQHSGSSENQEVDLELRLSL
Protein: ATP-binding cassette sub-family F member 3 (Q9NUQ8)
Organism: Homo sapiens (Human)
Function: Displays an antiviral effect against flaviviruses such as west Nile virus (WNV) in the presence of OAS1B.
Interaction partners:
- Stalled ribosome sensor GCN1
- Large ribosomal subunit protein bL20m
- Large ribosomal subunit protein bL27m
- Large ribosomal subunit protein uL29
- Large ribosomal subunit protein uL5
- Large ribosomal subunit protein uL23
- Small ribosomal subunit protein uS13
- Large ribosomal subunit protein bL21m
- Large ribosomal subunit protein uL18
- Large ribosomal subunit protein bL33m
Sequence:
MATCAEILRSEFPEIDGQVFDYVTGVLHSGSADFESVDDLVEAVGELLQEVSGDSKDDAGIRAVCQRMYNTLRLAEPQSQGNSQVLLDAPIQLSKITENYDCGTKLPGLLKREQSSTVNAKKLEKAEARLKAKQEKRSEKDTLKTSNPLVLEEASASQAGSRKESRLESSGKNKSYDVRIENFDVSFGDRVLLAGADVNLAWGRRYGLVGRNGLGKTTLLKMLATRSLRVPAHISLLHVEQEVAGDDTPALQSVLESDSVREDLLRRERELTAQIAAGRAEGSEAAELAEIYAKLEEIEADKAPARASVILAGLGFTPKMQQQPTREFSGGWRMRLALARALFARPDLLLLDEPTNMLDVRAILWLENYLQTWPSTILVVSHDRNFLNAIATDIIHLHSQRLDGYRGDFETFIKSKQERLLNQQREYEAQQQYRQHIQVFIDRFRYNANRASQVQSKLKMLEKLPELKPVDKESEVVMKFPDGFEKFSPPILQLDEVDFYYDPKHVIFSRLSVSADLESRICVVGENGAGKSTMLKLLLGDLAPVRGIRHAHRNLKIGYFSQHHVEQLDLNVSAVELLARKFPGRPEEEYRHQLGRYGISGELAMRPLASLSGGQKSRVAFAQMTMPCPNFYILDEPTNHLDMETIEALGRALNNFRGGVILVSHDERFIRLVCRELWVCEGGGVTRVEGGFDQYRALLQEQFRREGFL
Protein: Nucleolar protein 6 (Q07623)
Organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Function: Predicted to be involved in rRNA processing.
Subcellular location: Nucleus, nucleolus {ECO:0000269|PubMed:14562095}.
Interaction partners:
- rRNA biogenesis protein RRP5
- U3 small nucleolar RNA-associated protein 4
- Probable ATP-dependent RNA helicase DHR1
- U3 small nucleolar RNA-associated protein 10
- rRNA processing protein RCL1
- U3 small nucleolar RNA-associated protein 20
- Ribosome biogenesis protein BMS1
- Protein KRI1
- U3 small nucleolar RNA-associated protein 21
- KRR1 small subunit processome component
Sequence:
MGSEEDKKLTKKQLKAQQFRKSKEEKDQEKDVKKEQAPEGKRPNSAAGNDGEEPVKKKRKTRRGRGGKGKNGKKGNRFIVFVGSLPRDITAVELQNHFKNSSPDQIRLRADKGIAFLEFDADKDRTGIQRRMDIALLQHGTLLKEKKINVELTVGGGGNSQERLEKLKNKNIKLDEERKERLTKMINDGNQKKIAKTTATAAQTSGTDNKPVPAGIHPDRAKLLK
Protein: Single-stranded DNA-binding protein, mitochondrial (E7EUY5)
Organism: Homo sapiens (Human)
Subcellular location: Mitochondrion matrix, mitochondrion nucleoid {ECO:0000256|ARBA:ARBA00004436}.
Interaction partners:
Sequence:
MFRRPVLQVLRQFVRHESETTTSLVLERSLNRVHLLGRVGQDPVLRQVEGKNPVTIFSLATNEMWRSGDSEVYQLGDVSQKTTWHRISVFRPGLRDVAYQYVKKGSRIYLEGKIDYGEYMDKNNVRRQATTIIAD
Protein: Rifin (Q8I217)
Organism: Plasmodium falciparum (isolate 3D7)
Interaction partners:
Sequence:
MKIHYTNILLFPLKLNILVNTHKKPSITPRHIQTNRLLCECQLYAPQNYDNDPEMKRVMQQFHDRTTQRFQEYDERLQEKRQVCKDTCDKEIQKIILKDKLEKELMDKFATLQTDIQSDAIPTCICEKSLADKVEKGCLRCAQNLGGIVAPSSGVLAGIAEGALYAWKPKALEASIKTAIAEGTANILAAGVEAGEVTGKELVIAGLKKMGISTLDNKSLESYFATTSYKNITNIAQAVQKLYFETCACDSSGKVVYLYGDANRHIPICNSVWNQTPAVLTTKKGISTKEVIEKTVQTMVSDAEGVAADASAAKSAELTAAIKAREAEVINTIFMSKQTAIIASVVAILIIVLIMLIIYLILRYRRKKKMKKKLQYIKLLNQ
Protein: Roundabout 2, isoform B (M9PC46)
Organism: Drosophila melanogaster (Fruit fly)
Interaction partners:
- Protein slit
- Protein commissureless 1
- Roundabout 1, isoform A
- receptor protein-tyrosine kinase
- Syndecan
- Protein son of sevenless
- Ephrin
- Semaphorin 5c
- Tyrosine-protein kinase Abl
- Netrin-B
Sequence:
MHLCEMRGMPLRLQPQCLTNESEIQIKIKSKIKNKTASEIKRRHRNNRDFHGERLKIMPVDRSRRAVFPLLLLLAGLNGLTQVGALKGENPRIIEHPMDTTVPKNDPFTFNCQAEGNPTPTIQWFKDGRELKTDTGSHRIMLPAGGLFFLKVIHSRRESDAGTYWCEAKNEFGVARSRNATLQVAFLRDEFRLEPANTRVAQGEVALMECGAPRGSPEPQISWRKNGQTLNLVGNKRIRIVDGGNLAIQEARQSDDGRYQCVVKNVVGTRESATAFLKVHVRPFLIRGPQNQTAVVGSSVVFQCRIGGDPLPDVLWRRTASGGNMPLRRVHVLEDRSLKLDDVTLEDMGEYTCEADNAVGGITATGILTVHAPPKFVIRPKNQLVEIGDEVLFECQANGHPRPTLYWSVEGNSSLLLPGYRDGRMEVTLTPEGRSVLSIARFAREDSGKVVTCNALNAVGSVSSRTVVSVDTQFELPPPIIEQGPVNQTLPVKSIVVLPCRTLGTPVPQVSWYLDGIPIDVQEHERRNLSDAGALTISDLQRHEDEGLYTCVASNRNGKSSWSGYLRLDTPTNPNIKFFRAPELSTYPGPPGKPQMVEKGENSVTLSWTRSNKVGGSSLVGYVIEMFGKNETDGWVAVGTRVQNTTFTQTGLLPGVNYFFLIRAENSHGLSLPSPMSEPITVGTRYFNSGLDLSEARASLLSGDVVELSNASVVDSTSMKLTWQIINGKYVEGFYVYARQLPNPIVNNPAPVTSNTNPLLGSTSTSASASASASALISTKPNIAAAGKRDGETNQSGGGAPTPLNTKYRMLTILNGGGASSCTITGLVQYTLYEFFIVPFYKSVEGKPSNSRIARTLEDVPSEAPYGMEALLLNSSAVFLKWKAPELKDRHGVLLNYHVIVRGIDTAHNFSRILTNVTIDAASPTLVLANLTEGVMYTVGVAAGNNAGVGPYCVPATLRLDPITKRLDPFINQRYPINQDHVNDVLTQPWFIILLGAILAVLMLSFGAMVFVKRKHMMMKQSALNTMRGNHTSDVLKMPSLSARNGNGYWLDSSTGGMVWRPSPGGDSLEMQKDHIADYAPVCGAPGSPAGGGTSSGGSGGAGSGASGGDDIHGGHGSERNQQRYVGEYSNIPTDYAEVSSFGKAPSEYGRHGNASPAPYATSSILSPHQQQQQQQPRYQQRPVPGYGLQRPMHPHYQQQQHQQQQAQQTHQQHQALQQHQQLPPSNIYQQMSTTSEIYPTNTGPSRSVYSEQYYYPKDKQRHIHITENKLSNCHTYEAAPGAKQSSPISSQFASVRRQQLPPNCSIGRESARFKVLNTDQGKNQQNLLDLDGSSMCYNGLADSGCGGSPSPMAMLMSHEDEHALYHTADGDLDDMERLYVKVDEQQPPQQQQQLIPLVPQHPAEGHLQSWRNQSTRSSRKNGQECIKEPSELIYAPGSVASERSLLSNSGSGTSSQPAGHNVXPLLPGSSLGQSQSKSQSQSQSQSDLQSQEQLYAREVRELLAWCERFNNGGVENFE
Protein: Fluconazole resistance protein 1 (O93870)
Organism: Candida albicans (Yeast)
Function: Transcription factor that acts as a negative regulator of fluconazole resistance in C.albicans. Also confers fluconazole resistance in S.cerevisiae by activation of the PDR5 gene.
Subcellular location: Nucleus {ECO:0000305}.
Interaction partners:
Sequence:
MSDDHSIHSHTQGLHHIKKKRVGKACDSCRIKKTKCDGKKPCNRCTLDNKICVFTEKKKTKEKKHPSGYVELLEARLDILTRSLEKLIELSRPHLQFIDDIITEEKSVDQEKSSPASSTPNSSSSDHHDDVEEQNSTGVVAPINKVVSYLIKEQGLLKNIPLEWEQGTEIAANFDPNRNLKSSSRLFAEHKGEAFIGSPVTSPQQMPTSNPFRRTSMFKEELESPSSDHYNESIFSQSVDEPYIKKEPNSAQFSKGTFSPQQQQLQQQQQMLNQFSLNTSRDISDIESDSSNKEDGLNSGSVSPPTSNYRSFSLFSDSNGEPILGKTSSLTSLTNKYENHSLSSPQTAINPVFNNSTTGPILTTLRRNSSSHSQKTLGSIQLQQKPRGSVHKPVRNHSRVSSFDKRMESTATAAATVAAVSGSVQLSQNTTPQNLPHLDNSQNNNYLRDNGMNNIGAGSVGGGLTFGAPSFTQPLSPSDDAIVYPTNQFTNRPATVSTFGGGLDVLVDNSLDPFFNI
Protein: Uncharacterized protein C57A10.07 (P87055)
Organism: Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Subcellular location: Membrane {ECO:0000305}; Multi-pass membrane protein {ECO:0000305}.
Interaction partners:
Sequence:
MLNKRLTIQLPFYATQTASSSRFWRVLSPKSRTGIALYASLILLCIFFTIFSTMSHPSLQCFSPTSLVGAQPLKNLTHLIIVAGHAVWLGGSTNGEDDSEWILEPYQKGEGKVFAQHVRSGLDLLSQDDSSLLVFSGGQTRNGAGPSSEAQSYYSLSMQINSDEGLAARRTTEEFARDSLENVLFSVARFYEVTSRYPQKITVVSFDFKRDRFLNLHRKAIKFPEHKFHFVGIDPEGGVSDATREAERKNAIIPFTEDPYACSNPLLVKKRMERNPFRRQHSYLITCPELIPLLQYCPSDPSKFFNGKLPW
Protein: Defective proboscis extension response 15, isoform A (Defective proboscis extension response 15, isoform B) (FI05813p) (Q9VGD0)
Organism: Drosophila melanogaster (Fruit fly)
Interaction partners:
- Dpr-interacting protein beta, isoform C
Sequence:
MELAKMPRRLILLALLICLPAIRGQAEETSILNSNGTNGRAFQRTQSRREALIPATTQMAQTLDKASAFRPTMAAALDAAAPNRSSNNVAINNISNNGDQRLRLTAALEANLIMSNRNVQEQHSYRITQDNATSAASIAPNGTAFGDAPSIPIGVAPATTTTIDPATTTPTTTTRRTTRRPVATTTLKPPPTIDDYQTIISQAGTHAYLPCNVKQLVKKPISWLRMRDGHILTVDQTTFIADQRFQSVFSPNPERWSLQIKYVQLKDEGTYECQVSTEPKASAIVHLRIVEPKTELIGESTRHVKAGSQVKLRCIISQALEPPLFINWFYNQKQIYLHNRRGWRTEIERIDLPAEVPTTSTTTTTTTTTASTTTTTTSTTPATPSTTATGSTEGATSSETLNGLVTITRSYILDAISQNDVSELGAAAGVAVATETSTAQLLTEVEATSSTSGTSTGAGLLASTSAAYAAGAAAGITTAATGDSAATAATTSAWLTTMDAEAATTAATTTTTMLPSSSFIKQITTASLIIPAVVKLDSGNYTCSPSNSAPRTIVLHVLNGEYSASAIKSGSVSWSALIGCHGYLHWRNVSTLLTLLWIIKFALARDICQPNATSKATTRTSLLRAGDGATADVTRETGPKSGASFHRVSSSISATKVAEDKT
Protein: Bifunctional lycopene cyclase/phytoene synthase [Includes: Lycopene beta-cyclase (EC 5.5.1.19) (Lycopene cyclase); Phytoene synthase (EC 2.5.1.32)] (Q9P854)
Organism: Phycomyces blakesleeanus (strain ATCC 8743b / DSM 1359 / FGSC 10004 / NBRC 33097 / NRRL 1555)
Function: Bifunctional enzyme that catalyzes the reactions from geranylgeranyl diphosphate to phytoene (phytoene synthase) and lycopene to beta-carotene via the intermediate gamma-carotene (lycopene cyclase).
Subcellular location: Membrane {ECO:0000305}; Multi-pass membrane protein {ECO:0000305}.
Interaction partners:
Sequence:
MLTYMEVHLYFTLPVLALLAFLYKPFFTTKDRFKYIFLCTVAFATASPWDNYIVYHKAWSYCPECVTAVIGYVPLEEYMFFIIMTLITVTFTSLTMRWTLPSFFIRPETPVFQSVCVRYIPIVGFLTIAAKAWASSIPDSHPFYGACILWYVCPVLALLWIGSGEYMLRRWKAVLFSIAVPTIFLCWVDQYAIARGTWDISRRTSTGIMVLPSLPLEEFLFFLLIDTVLVFASCATDRAHAIVHIYITPMNHNKVSTWYMDFFYLCWAFLQTDQALSGETLSDLDATWRILREASASFYTASSVFSFEARQDLGVLYGFCRATDDLADNNDVSVPDRKKQLELVRGFVRQMFDSKHGHPDIDWTQYSGSIPDSFIAAFRSFTRLRDVLEIKAVEELLDGYTFDLEQREVKNEDDLVYYSACVASSVGEMCTRVLMASEPGGNRTMLKWTVERARDMGLALQLTNIARDIVTDSKQLGRSYVPRDWLTSQESALLKAGKARELGDERLRQIALKMVYTADDLNLMASRAIDYLPPSSRCGVRAACNVYTAIGVSLHKANGYPDRAHLTKLERMKVTFRCVYGFRKGHQGVQGDRGKSQAFTVI
Protein: LD27791p (Moladietz, isoform A) (Moladietz, isoform C) (Moladietz, isoform D) (Moladietz, isoform F) (RE74613p) (Q9VJQ7)
Organism: Drosophila melanogaster (Fruit fly)
Subcellular location: Membrane {ECO:0000256|ARBA:ARBA00004141}; Multi-pass membrane protein {ECO:0000256|ARBA:ARBA00004141}.
Interaction partners:
- Dual oxidase
- NADPH oxidase, isoform C
Sequence:
MKGWFDAFRDDGGPTLYSFSNRTPVTGDVSIVAVSVLFATFYVAFLVIFPGVRKQKFTTFSTVTLSLFVGLVILITRLGSAWHVAHATIIAPYKAFSREKLPARIGTHIGLMHVNVTLTAIPIGNWTPPDIDYNERFTWEGANDMSANYRHALQRGLPFPILTVAEYFSLGREGFSWGGQYRAAGYFASIMLWASLASWLLMNLLLIAVPRYGAYMKALTGALLVCTTVGYHCLLPKRPLSIHLEGGRLEFHFGWCYWLVLVAGILCFIAGVLISIIDLVWPHTFSTVLEVYYGTPYDRHVILEESSDVRYRKPRNSRSLEDPPGLGSRILRRLSSKARDLQPGTAPRRDSPAGVSSSGGVENKGFQSDAPKSPWRYPFRRSQQMAQQQHSHPLHQHPLQQHHQHHQHHHQQQLQFVGGPVVQHPMHHMQRTMSQDSGSSIASAAVQISPLHKHALARMLPNPPVERIRDMDHW
Protein: mRNA cleavage and polyadenylation factor clp1 (Q10299)
Organism: Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Function: Required for endonucleolytic cleavage during polyadenylation-dependent pre-mRNA 3'-end formation.
Subcellular location: Nucleus {ECO:0000255|HAMAP-Rule:MF_03035, ECO:0000269|PubMed:16823372}. Cytoplasm {ECO:0000269|PubMed:16823372}.
Interaction partners:
- Uncharacterized protein C4G9.04c
- Uncharacterized RNA-binding protein C644.16
- mRNA 3'-end-processing protein yth1
- mRNA 3'-end-processing protein rna14
- Cleavage and termination factor 1
- Endoribonuclease ysh1
- Cleavage factor two protein 2
- Pre-mRNA polyadenylation factor fip1
- Transcription factor tau subunit sfc4
- Uncharacterized RING finger protein P8B7.15c
Sequence:
MKEIFIPKECEWRFEVDEPAIQIRLVSGNAEYFGTELALGPPYHFTRVKGAIYTWQGCTLEVEGEPSVEYVAEETPMSTYLNLHFALEGLRLQAENAAANDESSYGPCVCLIGPRSCGKTSVLKILESYALKQSRHPICVNLDPTQPMLALPGSISAFHNATILDIQDADGFGASTSTGPTHVLAKVPLVYNFGLDSPLDNPKLYKLSLSRLALAVHSRMSQSKDARVSGCLVDTSSIQENAEKYQDILHSIITDFRINIIIVLGSERLYSSMKRKYADATWLSVVKVSSSGGCIDREEEWIQQFQARCIKQYFYGDDRMPLSPLSMIVDSTQLVVYRVLEASESGPKSSVLPLGFEEENTQSEKQDGNTSLRLHGKGEFLERISTEAMTILQNSILAVSSVGEDEDEATVVDSCIIGYVFVSDVDDVKNRMTLLSPVPEQLPSNALIMGTCKWQE
Protein: Actin-related protein 2/3 complex subunit 2A (Actin-related protein C2A) (Arp2/3 complex 34 kDa subunit) (p34-ARC) (Protein DISTORTED TRICHOMES 2) (Q8LGI3)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Functions as actin-binding component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks. Seems to contact the mother actin filament (By similarity). Arp2/3 complex plays a critical role in the control of cell morphogenesis via the modulation of cell polarity development.
Subcellular location: Cytoplasm, cytoskeleton {ECO:0000250}. Cell projection {ECO:0000250}.
Interaction partners:
- Actin-related protein 2/3 complex subunit 1B
- Actin-related protein 2/3 complex subunit 4
- Actin-related protein 2
- Actin-related protein 2/3 complex subunit 1A
- Actin-related protein 2/3 complex subunit 5B
- Actin-related protein 2/3 complex subunit 3
- Actin-related protein 3
- Actin-related protein 2/3 complex subunit 5A
- At4g14145
- Uncharacterized protein
Sequence:
MILLQSHSRFLLQTLLTRAQNLDKAVELDYQWIEFDDVRYHVQVTMKNPNLLLLSVSLPNPPPEAMSFDGLPLGAIEAIKTTYGTGFQILDPPRDGFSLTLKLNFSKVRPDEELLTKLASIREVVMGAPLKIIFKHLASRTVAPELDRLVAIMHRPNETFFLVPQADKVTVAFPMRFKDSVDTILATSFLKEFVEARRAAALNTAPSCSWSPTAPQELEGAPKETLSANAGFVTFVIFPRHVEGKKLDRTVWNLSTFHAYVSYHVKFSEGFMHTRMRRRVESMIQALDQAKPLEKTRSMNNKSFKRLGLNEVNHTNSK
Protein: Chaperonin containing Tcp1, subunit 6A (Zeta 1) (Chaperonin subunit 6a (Zeta)) (Q3MHS9)
Organism: Rattus norvegicus (Rat)
Subcellular location: Cytoplasm {ECO:0000256|ARBA:ARBA00004496}.
Interaction partners:
- T-complex protein 1 subunit epsilon
- T-complex protein 1 subunit beta
- T-complex protein 1 subunit delta
- T-complex protein 1 subunit eta
- T-complex protein 1 subunit gamma
- T-complex protein 1 subunit alpha
- T-complex protein 1 subunit theta
- Chaperonin containing TCP1 subunit 8 like 2
- Heat shock protein HSP 90-beta
- Bardet-Biedl syndrome 10
Sequence:
MAAVKTLNPKAEVARAQAALAVNISAARGLQDVLRTNLGPKGTMKMLVSGAGDIKLTKDGNVLLHEMQIQHPTASLIAKVATAQDDITGDGTTSNVLIIGELLKQADLYISEGLHPRIITEGFEAAKEKALQFLEQVKVSKEMDRETLIDVARTSLRTKVHAELADVLTEAVVDSILAIRKKDEPIDLFMVEIMEMKHKSETDTSLIRGLVLDHGARHPDMKKRVENAYILTCNVSLEYEKTEVNSGFFYKSAEEREKLVKAERKFIEDRVKKIVELKKKVCGDSDKGFVVINQKGIDPFSLDALAKEGIVALRRAKRRNMERLTLACGGIALNSFDDLNPDCLGHAGLVYEYTLGEEKFTFIEKCNNPRSVTLLVKGPNKHTLTQIKDAIRDGLRAVKNAIDDGCVVPGAGAVEVALAEALIKYKPSVKGRAQLGVQAFADALLIIPKVLAQNSGFDLQETLVKVQAEHSESGQLVGVDLNTGEPMVAAEMGVWDNYCVKKQLLHSCTVIATNILLVDEIMRAGMSSLKG
Protein: DNA gyrase subunit B (EC 5.6.2.2) (A0A0G2Q9D6)
Organism: Mycobacterium bovis (strain BCG / Pasteur 1173P2)
Function: A type II topoisomerase that negatively supercoils closed circular double-stranded DNA in an ATP-dependent manner and also catalyzes the interconversion of other topological isomers of double-stranded DNA rings, including catenanes and knotted rings. Relaxes negatively supercoiled DNA in an ATP-independent manner. A linear reaction intermediate can be trapped in the presence of the antibiotic ciprofloxacin. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.
Subcellular location: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_01898}.
Interaction partners:
Sequence:
MGKNEARRSALAPDHGTVVCDPLRRLNRMHATPEESIRIVAAQKKKAQDEYGAASITILEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNAVDEAMAGYATTVNVVLLEDGGVEVADDGRGIPVATHASGIPTVDVVMTQLHAGGKFDSDAYAISGGLHGVGVSVVNALSTRLEVEIKRDGYEWSQVYEKSEPLGLKQGAPTKKTGSTVRFWADPAVFETTEYDFETVARRLQEMAFLNKGLTINLTDERVTQDEVVDEVVSDVAEAPKSASERAAESTAPHKVKSRTFHYPGGLVDFVKHINRTKNAIHSSIVDFSGKGTGHEVEIAMQWNAGYSESVHTFANTINTHEGGTHEEGFRSALTSVVNKYAKDRKLLKDKDPNLTGDDIREGLAAVISVKVSEPQFEGQTKTKLGNTEVKSFVQKVCNEQLTHWFEANPTDSKVVVNKAVSSAQARIAARKARELVRRKSATDIGGLPGKLADCRSTDPRKSELYVVEGDSAGGSAKSGRDSMFQAILPLRGKIINVEKARIDRVLKNTEVQAIITALGTGIHDEFDIGKLRYHKIVLMADADVDGQHISTLLLTLLFRFMRPLIENGHVFLAQPPLYKLKWQRSDPEFAYSDRERDGLLEAGLKAGKKINKEDGIQRYKGLGEMDAKELWETTMDPSVRVLRQVTLDDAAAADELFSILMGEDVDARRSFITRNAKDVRFLDV
Protein: Mitochondrial ornithine transporter 1 (Q12375)
Organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Function: Required for arginine biosynthesis. Transports ornithine synthesized from glutamate in the mitochondrial matrix to the cytosol, where it is converted to arginine.
Subcellular location: Mitochondrion inner membrane {ECO:0000269|PubMed:14562095}; Multi-pass membrane protein {ECO:0000269|PubMed:14562095}.
Interaction partners:
- Amino-acid acetyltransferase, mitochondrial
- Arginine biosynthesis bifunctional protein ArgJ, mitochondrial
- Protein ARG5,6
- Ornithine carbamoyltransferase
- Argininosuccinate synthase
- Argininosuccinate lyase
- Acetylornithine aminotransferase, mitochondrial
- Cytidine deaminase
Sequence:
MEDSKKKGLIEGAILDIINGSIAGACGKVIEFPFDTVKVRLQTQASNVFPTTWSCIKFTYQNEGIARGFFQGIASPLVGACLENATLFVSYNQCSKFLEKHTNVSPLGQILISGGVAGSCASLVLTPVELVKCKLQVANLQVASAKTKHTKVLPTIKAIITERGLAGLWQGQSGTFIRESFGGVAWFATYEIVKKSLKDRHSLDDPKRDESKIWELLISGGSAGLAFNASIFPADTVKSVMQTEHISLTNAVKKIFGKFGLKGFYRGLGITLFRAVPANAAVFYIFETLSAL
Protein: Photosystem II reaction center protein T (PSII-T) (P0C428)
Organism: Oryza sativa subsp. indica (Rice)
Function: Seems to play a role in the dimerization of PSII.
Subcellular location: Plastid, chloroplast thylakoid membrane {ECO:0000255|HAMAP-Rule:MF_00808}; Single-pass membrane protein {ECO:0000255|HAMAP-Rule:MF_00808}.
Interaction partners:
- Photosystem II reaction center protein L
- Photosystem II reaction center protein J
- Photosystem II reaction center protein I
- Cytochrome b559 subunit beta
- Photosystem II CP47 reaction center protein
- Photosystem II D2 protein
- Photosystem II reaction center protein Z
- Photosystem II reaction center protein H
- Photosystem II CP43 reaction center protein
- Photosystem II reaction center protein K
Sequence:
MEALVYTFLLVSTLGIIFFAIFFREPPKVPTKKVK
Protein: Probable phospholipid-transporting ATPase 11 (AtALA11) (EC 7.6.2.1) (Aminophospholipid flippase 11) (Q9SAF5)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Involved in transport of phospholipids.
Subcellular location: Membrane {ECO:0000255}; Multi-pass membrane protein {ECO:0000255}.
Interaction partners:
- AT hook motif-containing protein
- RING-type E3 ubiquitin transferase
- At1g12450
- Serine carboxypeptidase-like 3
- Adenine phosphoribosyltransferase 4
- Eukaryotic translation initiation factor 2A
Sequence:
MTKCRRRRLHLSNIYAFKGRKSNFQEDHSHIGGPGFSRVVYCNEPNSPAAERRNYVGNYVRSTKYTLASFIPKSLFEQFRRVANFYFLVTGVLSLTALSPYSPISALLPLTFVIAASMVKEAIEDWGRKKQDIEMNNRKVKVHDGNGIFRREGWRDLKVGNIVRVEKDEFFPADLLLLSSSYEDSICYVETMNLDGETNLKVKQGLEATSSALHEDSDFKELKAVVKCEDPNADLYTFVGTLHFEEQRLPLSITQLLLRDSKLRNTEYIYGVVVFTGHDTKVIQNSTDPPSKRSRIERKMDKIIYLMFGVVFLMSFIGSIVFGIETREDRVRNGGRTERWYLRPDNADIFFDPDRAPMAAVYHFFTAVMLYSYFIPISLYVSIEIVKVLQSLFINNDILMYYEENDKPAHARTSNLNEELGMVDTILSDKTGTLTCNSMEFIKCSIAGTAYGRGITEVERSMAMRSNGSSLVGDDLDVVVDQSGPKIKGFNFLDERVMKGNWVKQRDAAVLQKFFRLLAVCHTAIPETDEATGSVSYEAESPDEAAFVVAAREFGFEFFSRTQNGISFRELDLASGKTVERVYRLLNVLEFNSARKRMSVIVRDEDGRLLLLSKGADNVMFERLAKNGRKFEEKTREHVNEYADAGLRTLILAYREVDENEYIEFSKNFNEAKNSVTADRESLIDEITEQMERDLILLGATAVEDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRQEMKQIIINLETPHIKALEKAGEKDAIEHASRESVVNQMEEGKALLTASSSASSHEAFALIIDGKSLTYALEDDFKKKFLDLATGCASVICCRSSPKQKALVTRLVKSGTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRYLERLLLVHGHWCYSRISSMICYFFYKNITFGVTVFLYEAYTSFSAQPAYNDWFLSLFNVFFSSLPVIALGVFDQDVSARYCYKFPLLYQEGVQNLLFSWKRIIGWMFNGVFTALAIFFLCKESLKHQLYNPNGKTAGREILGGTMYTCVVWVVNLQMALAISYFTWLQHIVIWGSVAFWYIFLMIYGAITPSFSTDAYKVFIEALAPAPSYWLTTLFVMFFALIPFFVFKSVQMRFFPGYHQMIQWIRYEGHSNDPEFVEMVRQRSIRPTTVGFTARRAASVRRSGRFHDQLNKNFIAF
Protein: 50S ribosomal protein L7Ae, putative (Q580A3)
Organism: Trypanosoma brucei brucei (strain 927/4 GUTat10.1)
Interaction partners:
- Nucleolar protein 10
- Centromere/microtubule binding protein cbf5, putative
- Uncharacterized protein
- H/ACA ribonucleoprotein complex subunit
- Nucleolar RNA binding protein, putative
- Nucleolar protein 56
- Integral membrane bound transporter domain-containing protein
- Gar1/Naf1 RNA binding region
- Ribosome assembly factor mrt4
- Guanine nucleotide-binding protein subunit beta-like protein
Sequence:
MAENEQQEVVAYDYDRELYRCPISWPITSEKAKMTKKLYVLIKKTVVNNKKDVIKGIKDVTKALRKGQKGILVLGADASPYDVISHLPLLAEESDVPYVWVPSRQDLGTATQCKRATSVVLLKPTAELRPNYDKMILAIEDLNTA