wanglab/gogpt-training-data huggingface dataset:
Protein: 4-chlorobenzoate--CoA ligase (4-CBA:CoA ligase) (EC 6.2.1.33) (P86832)
Organism: Arthrobacter sp
Function: Catalyzes the formation of chlorobenzoyl-CoA via a 2 step reaction. First 4-chlorobenzoate is adenylated by ATP, followed by acyl transfer from the 4-chlorobenzoyl-AMP intermediate to CoA (By similarity). Benzoate, 4-bromobenzoate, 4-iodobenzoate and 4-fluorobenzoate also act as substrates. Inactive towards 4-nitrobenzoate.
Interaction partners:
Sequence:
MRTAFELVAWSAHRQPGAVALLDPESGHRLTYSELLKRIEGVATVLASRGVVRDELVATAMANTLDHAIILLALNRLGAIPVIINPRLKADEMVQLIRRDNIRTVIRTVAEGKSGTPADIDGVEELTLSAEVLSEGLRIDGNATPAFEAPRPEDPAFVFYTSGTTGLPKGVVIPHRAIEPRVLFMSTQAGLRFGGHNNLLGLMPIHHVIGFFGVFLGSLAFNGTWIPVTAFDPAQAVKWVEELDVTCLFASPTHFDALLATSEFAPEKLKSVDSVIFAGAAINQSILKRLEKCLQVPIVDIYGTTETMNSLFNPDATQERGLRPGYHSRVQFASVSESPSVALPAGVEGELVVDASADATFTHYLNNPEATAAKIVDGWYRTGDSGYVDDSGRVILTGRIDDMINTGAENVHAEEVEQIISRHPAVVEAAVVGLPDTRWGEVVTAVVVVSEPLTADLLDQVCLDSELANFKRPRRYFVVNELPRNAAMKVSRRTLREYLGAHAADQPNPETGFIQFTIEESQ
Protein: Transcription factor IIIC subunit 5 HTH domain-containing protein (Q38CE2)
Organism: Trypanosoma brucei brucei (strain 927/4 GUTat10.1)
Interaction partners:
- Uncharacterized protein
- Transcription factor TFIIIB component B'' Myb domain-containing protein
- Transcription factor, putative
- TATA box-binding protein-like 1
- DNA-directed RNA polymerase subunit
- DNA-directed RNA polymerase III subunit RPC3
- DNA-directed RNA polymerase III subunit RPC6
- DNA-directed RNA polymerase subunit
- DNA-directed RNA polymerase subunit beta
- RNA polymerase III subunit Rpc25 domain-containing protein
Sequence:
MCIPLSSLFCHCPYTHCCPVYSPRISFIIHVTCHVASKGWGMAAVEPYRRFVSIELPFCLPVTVETNTDGTHSSCATATADRHTVEAFVPPSFLRPCIDDIIPTAREKAERQEGGNDTAGKGEPKEMLGIATTTEYCTGEIFSGWRSLDFDADLESRLEGTADGNRSKLTTTANEEGEAERERIRRESFPSITPQLLLQGFFRNDLLVEVKRTRRVKRLRNVETGRVVKETYVDGGTDHKQTGVTVLGVVSREVDIVKPADFCFSPFTSENIESFPELCSGNIFPPGHFIGEKSPFEVALVYDSHSGKRDMDRLDNTATSFNCDEAPLWEFEGVPTLTMAAGDPNIPPPPSQAQMDILRRLNEGFDEQGCIEVRAVKALLEERPVWVTKDLIDAIFETGVCPRTHINKKAVACLTYIIKNGPFNRMRIRMGFNPYANPSSACLQRIAVKICRRSELGTCLRDISRVPYINEVLQEILDSKSHKRGSEEDSGAFKRPSSLPYRPRGTLFERLARAIGLGQLYVALQLIDVSDDAFLQELLSTVSADAEIPLEDRTWRCGWIGSGCYQRAINHIISTFTTFIREEVEPVLQRRRSGQENDQVGESAGERSPYASSTSSVSPESYGDDDNEDSLESVSPVDDLSQHPDDG
Protein: Solute carrier family 22 member 4 (Organic cation/carnitine transporter 1) (Octn1) (Q9R141)
Organism: Rattus norvegicus (Rat)
Function: Sodium-ion dependent transporter of various organic cationic compounds. A key substrate of this transporter is ergothioneine (ET). Able to transport carnitine, probably moving one sodium ion with one molecule of carnitine (By similarity). Also transports tetraethylammonium (TEA) without the involvement of sodium. May also contribute to regulate the transport of cationic compounds in testis across the blood-testis-barrier (Probable).
Subcellular location: Apical cell membrane {ECO:0000250|UniProtKB:Q9H015}; Multi-pass membrane protein {ECO:0000305}. Basal cell membrane {ECO:0000250|UniProtKB:Q9H015}; Multi-pass membrane protein {ECO:0000305}. Mitochondrion membrane {ECO:0000250|UniProtKB:Q9H015}; Multi-pass membrane protein {ECO:0000305}.
Interaction partners:
- Solute carrier family 15 member 2
- Solute carrier organic anion transporter family member 4C1
- Solute carrier family 2 member 9
- Multidrug and toxin extrusion protein 1
- Solute carrier family 15 member 1
Sequence:
MRDYDEVIAFLGDWGPFQRLIFFLLSASIIPNGFNGMSVVFLAGTPEHRCLVPHTVNLSSAWRNHSIPLETKDGRQVPQSCRRYRLATIANFSALGLEPGLDVDLEQLEQESCLDGWEYSKDVFLSTIVTEWNLVCEDDWKTPLTTSLFFVGVLCGSFVSGQLSDRFGRKKVLFATMAVQTGFSFVQIFSTNWEMFTVLFAIVGMGQISNYVVAFILGTEILSKSVRILFSTLGVCTFFAIGYMVLPLFAYFIRDWRMLLLALTLPGLFCVPLWWFIPESPRWLISQRRFEEAEQIIQKAAKMNGIMAPAVIFDPLELQELNSLKQQKVFILDLFKTRNIATITVMSVMLWMLTSVGYFALSLNVPNLHGDVYLNCFLSGLIEVPAYFTAWLLLRTLPRRYIIAGVLFWGGGVLLLVQVVPEDYNFVSIGLVMLGKFGVTSAFSMLYVFTAELYPTLVRNMAVGITSMASRVGSIIAPYFVYLGAYNRLLPYILMGSLTVLIGIITLFFPESFGVTLPENLEQMQKVRGFRCGKKSTVSMDREENPKVLITAF
Protein: 5'-adenylylsulfate reductase 1, chloroplastic (EC 1.8.4.9) (3'-phosphoadenosine-5'-phosphosulfate reductase homolog 19) (PAPS reductase homolog 19) (Prh-19) (Adenosine 5'-phosphosulfate 5'-adenylylsulfate sulfotransferase 1) (APS sulfotransferase 1) (Thioredoxin-independent APS reductase 1) (P92979)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Reduces sulfate for Cys biosynthesis. Substrate preference is adenosine-5'-phosphosulfate (APS) >> 3'-phosphoadenosine-5'-phosphosulfate (PAPS). Uses glutathione or DTT as source of protons.
Subcellular location: Plastid, chloroplast {ECO:0000305}.
Interaction partners:
- Assimilatory sulfite reductase
- ATP-sulfurylase 3, chloroplastic
- Adenylyl-sulfate kinase 2, chloroplastic
- Adenylyl-sulfate kinase 1, chloroplastic
- ATP sulfurylase 1, chloroplastic
- Adenylyl-sulfate kinase 3
- Adenylyl-sulfate kinase 4, chloroplastic
- ATP sulfurylase 4, chloroplastic
- ATP sulfurylase 2
- Thiosulfate/3-mercaptopyruvate sulfurtransferase 2
Sequence:
MAMSVNVSSSSSSGIINSRFGVSLEPKVSQIGSLRLLDRVHVAPVSLNLSGKRSSSVKPLNAEPKTKDSMIPLAATMVAEIAEEVEVVEIEDFEELAKKLENASPLEIMDKALEKYGNDIAIAFSGAEDVALIEYAHLTGRPFRVFSLDTGRLNPETYRFFDAVEKHYGIRIEYMFPDSVEVQGLVRSKGLFSFYEDGHQECCRVRKVRPLRRALKGLKAWITGQRKDQSPGTRSEIPVVQVDPVFEGLDGGVGSLVKWNPVANVEGNDVWNFLRTMDVPVNTLHAAGYISIGCEPCTKAVLPGQHEREGRWWWEDAKAKECGLHKGNVKENSDDAKVNGESKSAVADIFKSENLVTLSRQGIENLMKLENRKEPWIVVLYAPWCPFCQAMEASYDELADKLAGSGIKVAKFRADGDQKEFAKQELQLGSFPTILVFPKNSSRPIKYPSEKRDVESLTSFLNLVR
Protein: FI16827p1 (NFAT nuclear factor, isoform E) (E1JJP6)
Organism: Drosophila melanogaster (Fruit fly)
Subcellular location: Cytoplasm {ECO:0000256|ARBA:ARBA00004496}. Nucleus {ECO:0000256|ARBA:ARBA00004123}.
Interaction partners:
Sequence:
MRFTYNQYKHYESGYRIPSKMHNLSHNNNNNSNNNNNGGGHTNNNNNGNNSGHHYAHHNNSNNGGNNNTNFQAYQHHYKSNFGMRMTMSTNSTMSARIHRKGFRIPSKRQPGKGLPGKLHTITRTGPGKMVPGKRIPQRPHPPPCDNSNDSGLGFDQHTELRSSAGAGGVTDPAANGGSGSNSGQRSSLLVNSALTNTVAAAAAAAAAAVASNTLQQHQQHHQQQQQQQQQQQQQQQQQQQQQQQQQHSPQQHLIRAIPVSRFISARNVTRVANKRQPTTPLNSVASSNDGQVQLEILSQPEQQHRARYQTEGSRGAVKDRSGNGFPIVRLTGYDKVAVLQVFIGTDIGRVAPHMFYQACKVAGKNSTQCNEKKVDGTMVIEIDFKPETDMTITCDCVGILKERNVDVEHRFPEHLAQKNKKKSTRCRMVFRTQLTRDDGTTETLQVCSNPIICTQPPGVPEICKKSLNSCPVDGGLELFIIGKNFLKDTHVVFQETYDSVNGDDPATEIAVRQQLIGGTAALWEQSVLPDKEYLHQTHLICTVPPYLHQNILKPVQVQVSIVSSGKKSEPHTFTYTAKGQYTTLAAASTLSNTIHAQAI
Protein: Allantoinase (AtALN) (EC 3.5.2.5) (Q94AP0)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Catalyzes the conversion of allantoin (5-ureidohydantoin) to allantoate by hydrolytic cleavage of the five-member hydantoin ring. Catalyzes the first step of the ureide allantoin degradation followed by the sequential activity of AAH, UGLYAH and UAH which allows a complete purine breakdown without the intermediate generation of urea.
Interaction partners:
- Allantoate deiminase
- Uric acid degradation bifunctional protein TTL
- Uricase
- Dihydroorotate dehydrogenase
- Dihydropyrimidine dehydrogenase
- Uridine 5'-monophosphate synthase
- (S)-ureidoglycine aminohydrolase (AtUGLYAH)
- Aspartate carbamoyltransferase, chloroplastic
- Carbamoyl phosphate synthase small chain, chloroplastic
- Carbamoyl phosphate synthase arginine-specific large chain, chloroplastic
Sequence:
MERTLLQWRLLPLLALIVALFSFFFASPRSLQGNNKCSLLPHDHYWISSKRIVTPNGLISGSVEVKGGIIVSVVKEVDWHKSQRSRVKVIDYGEAVLMPGLIDVHVHLDDPGRSEWEGFPSGTKAAAAGGITTLVDMPLNSFPSTVSPETLKLKIEAAKNRIHVDVGFWGGLVPDNALNSSALESLLDAGVLGLKSFMCPSGINDFPMTNITHIKEGLSVLAKYKRPLLVHAEIERDLEIEDGSENDPRSYLTYLKTRPTSWEEGAIRNLLSVTENTRIGGSAEGAHLHIVHLSDASSSLDLIKEAKGKGDSVTVETCPHYLAFSAEEIPEGDTRFKCSPPIRDAANREKLWEALMEGDIDMLSSDHSPTKPELKLMSDGNFLKAWGGISSLQFVLPITWSYGKKYGVTLEQVTSWWSDRPSKLAGLHSKGAVTVGKHADLVVWEPEAEFDVDEDHPIHFKHPSISAYLGRRLSGKVVSTFVRGNLVFGEGKHASDACGSLQLATT
Protein: Cysteine rich necrotrophic effector Tox1 (Toxin 1) (A9JX75)
Organism: Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 / FGSC 10173) (Glume blotch fungus) (Parastagonospora nodorum)
Function: Necrotrophic effector that plays a critical role during fungal penetration, via its interaction with the host Snn1 protein. Snn1 is a member of the wall-associated kinase class of receptors, which are known to drive pathways for biotrophic pathogen resistance. Recognition of Tox1 by Snn1 induces mitogen-activated protein kinase genes such as MAPK3 and activates programmed cell death, which allows this necrotroph to gain nutrients and sporulate. Recognition of Tox1 by Snn1 also induces other plant defense responses, including oxidative burst and pathogenesis related (PR) gene expression. The development of necrosis and disease induced by Tox1, and particularly penetration during infection, requires light, which is probably related to the light-dependent expression of host Snn1. Tox1 plays an additional role in providing significant protection from wheat chitinases by binding chitin in the fungal cell wall.
Subcellular location: Secreted {ECO:0000269|PubMed:22241993, ECO:0000269|PubMed:27041151}. Note=Localizes to the outside of mycelium and the penetration structure (PubMed:27041151). Remains largely on the leaf surface during mesophyll necrosis (PubMed:27041151). {ECO:0000269|PubMed:27041151}.
Interaction partners:
Sequence:
MKLTMVLSVAFATLTFANEGILTFEGLGLARRQTICHTPGGSGCRASISGDQCCCTSCTPEDCSDLCKNGKQAAHEAQKQKKCAKCCNAGGESHELCCSIASAGIDCNPCTAGLRMC
Protein: Lysozyme (EC 3.2.1.17) (Q9A6C1)
Organism: Caulobacter vibrioides (strain ATCC 19089 / CIP 103742 / CB 15) (Caulobacter crescentus)
Interaction partners:
- Histidine protein kinase DivJ
- Non-motile and phage-resistance protein
- PopZ
- Isovaleryl-CoA dehydrogenase, mitochondrial
- Cell cycle transcriptional regulator CtrA
- CpdR
- Bactofilin A
Sequence:
MKPRHQVSRAAVDLIKRFEGYRQKAAQLPDGRWTVGYGHTLTAREGASVSEKDAEALLLYDLISVAHSVNEHTYTPLNQNQFDALVCFAFNIGLDNFLRSGVLRRINEGSLLQAACAMEMWRKADFEGERIVIDALVRRRSAEKTLFLTPANGEWVPAPSPVLRPKVDYDASCAVPKQTPATVNTRTEGDRVIAQREEGLPLNVVVPEEDAPTATEQSAAAVAARLEAILPETPSAPASMAKPAMRQDDLGLPEPPAPTQPAAMEPAPVLFEAEPQPAPVEPPPAAPVEFTPFRLTPQASEQAEAPVEAPAPTRPAPSEPTLFGAPATGSSVFNLDGFSTSEDATVGVMDVPLVEPEPPRFGNTSLLISLGILGLALFGGGVLWILTVAAGSDGQVKLFGYGASMVGAICFVVSAYLLLRRLAGPDVSDEE
Protein: RNA binding protein fox-1 homolog 3 (Fox-1 homolog C) (Hexaribonucleotide-binding protein 3) (Fox-3) (Neuronal nuclei antigen) (NeuN antigen) (Q8BIF2)
Organism: Mus musculus (Mouse)
Function: Pre-mRNA alternative splicing regulator. Regulates alternative splicing of RBFOX2 to enhance the production of mRNA species that are targeted for nonsense-mediated decay (NMD).
Subcellular location: Nucleus. Cytoplasm.; SUBCELLULAR LOCATION: [Isoform 1]: Nucleus.; SUBCELLULAR LOCATION: [Isoform 4]: Cytoplasm.; SUBCELLULAR LOCATION: [Isoform 5]: Nucleus.
Interaction partners:
- Glial fibrillary acidic protein
- Allograft inflammatory factor 1
- Neuronal migration protein doublecortin
- Nestin
- Tubulin beta-3 chain
- Calbindin
- Oligodendrocyte transcription factor 2
- Microtubule-associated protein 2
- Synaptophysin
- Parvalbumin alpha
Sequence:
MAQPYPPAQYPPPPQNGIPAEYAPPPPHPTQDYSGQTPVPPEHGMTLYTPAQTHPEQPGTEASTQPIAGTQTVPQADEAAQTDNQQLHPSDPTEKQQPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFETSSDADRAREKLNGTIVEGRKIEVNNATARVMTNKKPGNPYANGWKLNPVVGTVYGPEFYAVTSFPYPTTGTAVAYRGAHLRGRGRAVYNTFRAAPPPPPIPTYGAALEQTLVKMPVPWAGLAPCPLPPQQTPEPAYPTSPAFPPLSCPFASRVVYQDGFYGAEIYGGYAAYRYAQPAAATAAAYSDSYGRVYAAADPYHHTIGPTATYSIGTMASLCRGGYSRFTPY
Protein: Probable glucose transporter HXT5 (P38695)
Organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Function: Probable glucose transporter.
Subcellular location: Membrane; Multi-pass membrane protein.
Interaction partners:
- High-affinity hexose transporter HXT6
- Low-affinity glucose transporter HXT4
- Low-affinity glucose transporter HXT3
- High-affinity hexose transporter HXT7
- High-affinity glucose transporter HXT2
- Low-affinity glucose transporter HXT1
- Carbon catabolite-derepressing protein kinase
- Transketolase 2
- 6-phosphogluconate dehydrogenase, decarboxylating 2
- Transaldolase NQM1
Sequence:
MSELENAHQGPLEGSATVSTNSNSYNEKSGNSTAPGTAGYNDNLAQAKPVSSYISHEGPPKDELEELQKEVDKQLEKKSKSDLLFVSVCCLMVAFGGFVFGWDTGTISGFVRQTDFIRRFGSTRANGTTYLSDVRTGLMVSIFNIGCAIGGIVLSKLGDMYGRKIGLMTVVVIYSIGIIIQIASIDKWYQYFIGRIISGLGVGGITVLAPMLISEVSPKQLRGTLVSCYQLMITFGIFLGYCTNFGTKNYSNSVQWRVPLGLCFAWSIFMIVGMTFVPESPRYLVEVGKIEEAKRSLARANKTTEDSPLVTLEMENYQSSIEAERLAGSASWGELVTGKPQMFRRTLMGMMIQSLQQLTGDNYFFYYGTTIFQAVGLEDSFETAIVLGVVNFVSTFFSLYTVDRFGRRNCLLWGCVGMICCYVVYASVGVTRLWPNGQDQPSSKGAGNCMIVFACFYIFCFATTWAPVAYVLISESYPLRVRGKAMSIASACNWIWGFLISFFTPFITSAINFYYGYVFMGCMVFAYFYVFFFVPETKGLTLEEVNEMYEENVLPWKSTKWIPPSRRTTDYDLDATRNDPRPFYKRMFTKEK
Protein: Transcription factor bHLH157 (BHLH transcription factor epsilon) (bHLH epsilon) (Basic helix-loop-helix protein 157) (AtbHLH157) (bHLH 157) (LONESOME HIGHWAY-like protein 2) (bHLH transcription factor bHLH157) (Q7XJU0)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Transcription factor that may regulate root development.
Subcellular location: Nucleus {ECO:0000255|PROSITE-ProRule:PRU00981}.
Interaction partners:
- Defensin-like protein 226
- Putative F-box protein At1g26510
- Myosin heavy chain-related protein
- Seed dormancy control protein
- Heavy metal-associated isoprenylated plant protein 1
- Homeodomain-like superfamily protein
- Pentatricopeptide repeat-containing protein At1g06143
- Probable serine/threonine-protein kinase WNK6
- Probable serine/threonine-protein kinase WNK5
- Probable serine/threonine-protein kinase WNK10
Sequence:
MGSEYKHILKSLCLSHGWSYAVFWRYDPINSMILRFEEAYNDEQSVALVDDMVLQAPILGQGIVGEVASSGNHQWLFSDTLFQWEHEFQNQFLCGFKILIRQFTYTQTIAIIPLGSSGVVQLGSTQKILESTEILEQTTRALQETCLKPHDSGDLDTLFESLGDCEIFPAESFQGFSFDDIFAEDNPPSLLSPEMISSEAASSNQDLTNGDDYGFDILQSYSLDDLYQLLADPPEQNCSSMVIQGVDKDLFDILGMNSQTPTMALPPKGLFSELISSSLSNNTCSSSLTNVQEYSGVNQSKRRKLDTSSAHSSSLFPQEETVTSRSLWIDDDERSSIGGNWKKPHEEGVKKKRAKAGESRRPRPKDRQMIQDRIKELRGMIPNGAKCSIDTLLDLTIKHMVFMQSLAKYAERLKQPYESKLVKEKERTWALEVGEEGVVCPIMVEELNREGEMQIEMVCEEREEFLEIGQVVRGLGLKILKGVMETRKGQIWAHFIVQAKPQVTRIQVLYSLVQLFQHHTKHDDLLS
Protein: Zinc-finger homeodomain protein 11 (AtZHD11) (Transcription factor HB29) (AtHB-29) (Zinc finger homeodomain transcription factor 1) (Q9SEZ1)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Transcription factor involved in the up-regulation of several stress-inducible genes. Acts as a transcriptional activator by interacting with MED25 and NAC proteins. Involved in increased drought tolerance.
Subcellular location: Nucleus {ECO:0000305}.
Interaction partners:
- Heavy metal-associated isoprenylated plant protein 26
- Mediator of RNA polymerase II transcription subunit 25
- NAC domain-containing protein 72
- NAC domain-containing protein 55
- NAC domain-containing protein 19
- Chaperone protein ClpD, chloroplastic
- E3 ubiquitin-protein ligase RHA2A
- Dehydration-responsive element-binding protein 2A
Sequence:
MDLSSKPQQQLLNSLPIAGELTVTGEMGVCYKECLKNHAANLGGHALDGCGEFMPSPTATSTDPSSLRCAACGCHRNFHRRDPSENLNFLTAPPISSPSGTESPPSRHVSSPVPCSYYTSAPPHHVILSLSSGFPGPSDQDPTVVRSENSSRGAMRKRTRTKFTPEQKIKMRAFAEKAGWKINGCDEKSVREFCNEVGIERGVLKVWMHNNKYSLLNGKIREIEHGLCLNTHSNDGDGSSSS
Protein: Putative cyclin-B3-1 (G2/mitotic-specific cyclin-B3-1) (CycB3;1) (Q9SA32)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Interaction partners:
- Cyclin-dependent kinase A-1
- Cyclin-dependent kinase B1-2
- Cyclin-dependent kinase B2-1
- Cyclin-dependent kinase B1-1
- Cell division cycle 20.4, cofactor of APC complex
- Cell division cycle 20.3, cofactor of APC complex
- Cyclin-dependent kinase B2-2
- Cell division cycle 20.1, cofactor of APC complex
- Wee1-like protein kinase
- Cell division cycle 20.5, cofactor of APC complex
Sequence:
MLRDGNKQSKNNVRFVRKSIKTTVKTSLQNRSSLKKPPVGRSKSRSISSIPSSAVASTLSLPEKVETKCLEEDTQGESSSSGNKDPTTKVLDVTAKPKSKRRKSFTSLLVNGSKFDEKNGETTEPEKLPSIDDESNQLEVAEYVDDIYQFYWTAEALNPALGHYLSAHAEVSPVTRGILINWLIEVHFKFDLMHETLYLTMDLLDRYLSQVPIHKNEMQLIGLTALLLASKYEDYWHPRIKDLISISAESYTREQILGMERSMLKQLKFRLNAPTPYVFMLRFLKAAQSNKKLEQLAFYLIELCLVEYEALKYKPSLLCASAIYVARCTLHMTPVWTSLLNNHTHYNVSQMKDCSDMILRFHKAAKTGNLRVTYEKYINPDRSNVAVLKPLDKLPL
Protein: Putative ATP-dependent RNA helicase Pl10 (EC 3.6.4.13) (P16381)
Organism: Mus musculus (Mouse)
Function: Putative ATP-dependent RNA helicase. Possible role in a key step of the spermatogenic process.
Interaction partners:
- Serine/threonine-protein kinase TBK1
- ATP-dependent RNA helicase DDX3X
- Eukaryotic translation initiation factor 3 subunit B
- Eukaryotic translation initiation factor 3 subunit I
- Small ribosomal subunit protein uS3
- Eukaryotic translation initiation factor 3 subunit G
- Small ribosomal subunit protein uS9
- Ubiquitin-like protein FUBI
- Small ribosomal subunit protein eS1
- Eukaryotic translation initiation factor 3 subunit A
Sequence:
MSHVAEEDELGLDQQLAGLDLTSRDSQSGGSTASKGRYIPPHLRNREAAKAFYDKDGSRWSKDKDAYSSFGSRSDTRAKSSFFSDRGGSGSRGRFDERGRSDYESVGSRGGRSGFGKFERGGNSRWCDKADEDDWSKPLPPSERLEQELFSGGNTGINFEKYDDIPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYTDGPGEALRAMKENGKYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEEADKRSFLLDLLNATGKDSLILVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITKDLLDLLVEAKQEVPSWLENMAFEHHYKGGSRGRSKSRFSGGFGARDYRQSSGASSSSFSSGRASNSRSGGGSHGSSRGFGGGSYGGFYNSDGYGGNYSSQGVDWWGN
Protein: Protein involved in starch initiation 1 (Myosin heavy chain-related protein) (Myosin-resembling chloroplast protein) (Q8H1E5)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Subcellular location: Plastid, chloroplast {ECO:0000255, ECO:0000269|PubMed:29866647, ECO:0000269|PubMed:30055112}. Note=Is in the soluble protein fraction of the leaves. Locates to distinct puncta within the chloroplasts. {ECO:0000269|PubMed:29866647}.
Interaction partners:
- C-type lectin receptor-like tyrosine-protein kinase At1g52310
- At4g12840
- Pentatricopeptide repeat
- F-box protein At1g70590
- Uncharacterized protein AT4g35690
- MIF4G domain-containing protein
- Tetratricopeptide repeat
- At3g27230
- Probable diphthine methyl ester synthase
- At4g27620
Sequence:
MGFSQAIRLNLASFSSPSPCDYCLTRVVNHKQKSLVAFPSITRRKRHLLLSVQSVLHNTRPNINDNGSAESANVLFDKLFARTHRLERQTNQHSVYPDDDDLPYSNLGVLESDLEAALVALLKREEDLHDAERKLLSDKNKLNRAKEELEKREKTISEASLKHESLQEELKRANVELASQAREIEELKHKLRERDEERAALQSSLTLKEEELEKMRQEIANRSKEVSMAISEFESKSQLLSKANEVVKRQEGEIYALQRALEEKEEELEISKATKKLEQEKLRETEANLKKQTEEWLIAQDEVNKLKEETVKRLGEANETMEDFMKVKKLLTDVRFELISSREALVFSREQMEEKELLLEKQLEELEEQRKSVLSYMQSLRDAHTEVESERVKLRVVEAKNFALEREISVQKELLEDLREELQKEKPLLELAMHDISVIQDELYKKANAFQVSQNLLQEKESSLVEAKLEIQHLKSEQASLELLLQEKDEELAEARNKLGEVNQEVTELKALMISREDQLMEATEMLKEKDVHLHRIEGELGSSKLKVTEAEMVVERIAELTNRLLMSTTNGQNQNAMRINNEISIDSMQQPLEKPHDDYGMENKRLVMELSFTRENLRMKEMEVLAVQRALTFKDEEINVVMGRLEAKEQELKKLKEETINDSEDLKVLYALAQERVGEKTMGDLAIEMLQLEAANLEVEAATSALQKLAKMSTELLTQADMSIEADTTHTVMPERGYSEGSNECLGEVKTEVVRLWSLTEKLLENAGIVAGTSTCMEGVIL
Protein: C-X-C chemokine receptor type 2 (CXC-R2) (CXCR-2) (CDw128b) (GRO/MGSA receptor) (High affinity interleukin-8 receptor B) (IL-8R B) (IL-8 receptor type 2) (CD antigen CD182) (P25025)
Organism: Homo sapiens (Human)
Function: Receptor for interleukin-8 which is a powerful neutrophil chemotactic factor. Binding of IL-8 to the receptor causes activation of neutrophils. This response is mediated via a G-protein that activates a phosphatidylinositol-calcium second messenger system. Binds to IL-8 with high affinity. Also binds with high affinity to CXCL3, GRO/MGSA and NAP-2.
Subcellular location: Cell membrane; Multi-pass membrane protein.
Interaction partners:
- Interleukin-8
- Growth-regulated alpha protein
- C-X-C motif chemokine 3
- Platelet basic protein
- C-X-C motif chemokine 5
- C-X-C chemokine receptor type 1
- C-X-C motif chemokine 6
- C-X-C motif chemokine 2
- Stromal cell-derived factor 1
- C-X-C motif chemokine 13
Sequence:
MEDFNMESDSFEDFWKGEDLSNYSYSSTLPPFLLDAAPCEPESLEINKYFVVIIYALVFLLSLLGNSLVMLVILYSRVGRSVTDVYLLNLALADLLFALTLPIWAASKVNGWIFGTFLCKVVSLLKEVNFYSGILLLACISVDRYLAIVHATRTLTQKRYLVKFICLSIWGLSLLLALPVLLFRRTVYSSNVSPACYEDMGNNTANWRMLLRILPQSFGFIVPLLIMLFCYGFTLRTLFKAHMGQKHRAMRVIFAVVLIFLLCWLPYNLVLLADTLMRTQVIQETCERRNHIDRALDATEILGILHSCLNPLIYAFIGQKFRHGLLKILAIHGLISKDSLPKDSRPSFVGSSSGHTSTTL
Protein: Protein EFR3 (Q03653)
Organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Interaction partners:
- Cargo-transport protein YPP1
- Phosphatidylinositol 4-kinase STT4
- Phosphatidylinositol 4-phosphate 5-kinase MSS4
- Protein SFK1
- Phosphatidylinositol 4-kinase PIK1
Sequence:
MQLSMRMMFTPKHQKLVNQCYPTGRTTDKKPKSSETSYLLYYVNSRRSKLEKVSTYLIKRSTSDLNHRRIGNIAVTLDLMNKIVLHCKENLNVFVKDFLYIMNKVLSNNNFNNDVSVVELIELAFSSICQNLDDVLCNGDMEFVQLYQNFVDLFFKIVTERIHNDDMLLKCCIDISNTNSVSSNPQLNHFVSKSVAYTISKFQERNPKFKTLSLEAALESNLGKRLSRTQTRTIGLDKAAEDNHDLSVKALQSYFNTTETDKLNLSIRTLLRCLQSTPNKELLEFVCNGIPVQLRYIVILLLVRQLSDKDKNVNPIVSLKLMSSLLVSDVSIVGLSVLDIMRKLLNFQLKNATNKEVVAQSCITMTDLNHKTYYAEQTSDMLYELLLKLKSDTVKDVEKNAVVEDIDFLVEHITQPSISLELFIDLAHYMKNHIICLFNIVETEVPSSILFSKLYSLLRELDSHGVQKEMMEEIFDKYGKMALLSGLNYFLENVSEPEYTYYSYHLQAANFLKLNDYKSQTEYKMQTRTLFTKEDLLSYYSDTGSNKYSKKGAQILLSRDNQISTSDLLSDSQVRTTPLEYKNVPNAIFSNGKAVYDNNDFAAKQNKFDNSIDDNIEEANDTVISDANAKGSIYRFVAEDARSWKTMRATAPKVSDLKKTMNEKNIPNNMKRDGSFRGSQSVKSRVTNITFLLNELKTFSDDANKIKDPDEENIVGLDKIDVARSNSLRLAPISSLSDRSSIGNRKSFLQKTATGENQNDDFKDANEDLHSLSSRGKIFSST
Protein: Repressor, PtrB (G3XDA6)
Organism: Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Interaction partners:
- Uncharacterized protein
- Transcription regulatory protein PrtN
- Phage late control D family protein
- Phage tail protein
- Holin
- Uncharacterized protein
- Phage tail protein
- Phage tail protein
- Probable bacteriophage protein
- Probable bacteriophage protein
Sequence:
MADLADHANELVLARLDGLLAARPALAIRESAEDCEDCGEPIPQARRRAAPGCSRCIDCQDRHERR
Protein: Large ribosomal subunit protein uL2 (60S ribosomal protein L2) (60S ribosomal protein L8) (P13023)
Organism: Dictyostelium discoideum (Social amoeba)
Interaction partners:
- Large ribosomal subunit protein eL43
- Large ribosomal subunit protein uL24
- Large ribosomal subunit protein eL30
- Large ribosomal subunit protein eL28
- Small ribosomal subunit protein eS8
- Large ribosomal subunit protein eL20
- Large ribosomal subunit protein uL13
- Large ribosomal subunit protein uL11
- Small ribosomal subunit protein uS11
- Large ribosomal subunit protein uL23
Sequence:
MGRIIRAQRKGKAGSVFGAHTHHRKGTPRFRALDYAERQGYVKGVVKEIIHDPGRGAPLARVVFKGLTQFKLDKQLFIAPEGMHTGQFVFAGKKATLTIGNILPIGKLPEGTIICNVEEKLGDCGAVARCSGNYATIVSHNPDEGVTRIKLPSGSKKNVSSLARAMIGIVAGGGRIDKPMLKAGRAFHKYRVKKNNWPKVRGVAMNPVEHPHGGGNHQHVGHATTTKRDDPAGKKVGLIAARRTGRLRGTKNISE
Protein: IP21418p (LP02841p) (Stress induced DNase (EC 3.-.-.-)) (Q9VAU2)
Organism: Drosophila melanogaster (Fruit fly)
Interaction partners:
Sequence:
MPDLKYMLTILSLYFFVGSVQANCLIDLAHLNANYVYLSQNNGVYDIQRSDIVEIHQTLYLLCNGGLHRTTFLCRYDSVFSPALSSAACAPPDPVVVKVPDTSCSIPSATFAVGFSFNGRFMELYRNCFDGYSLAFQHSIYKAYRYVNTVPRPNPTWQSDQLSGGFDNAYEGRATQACLLTNLGAVQPQCKFDRGHMTPASAFISTELKKSTFRYLNAIPQYRGVNRGKWKAVETWVNNMVRGLYDNPIINNVQIPRTYDVLKVCIGALGVHRLRHNTNNNMIPIYLLDNNKIPVPEWMYKIVSHLSGDKWVMLTYNDVSLPNQQALNQICHVIPCHPGLNLNTKDVGHTVCCDPYRFITINAPHLTGVC
Protein: 3,5-dihydroxyphenylacetyl-CoA synthase (EC 2.3.1.246) (3,5-dihydroxyphenylacetyl-CoA synthase polyketide synthase type III) (Q8KLK5)
Organism: Streptomyces toyocaensis
Function: Involved in the biosynthesis of the nonproteinogenic amino acid monomer (S)-3,5-dihydroxyphenylglycine (Dpg) responsible of the production of vancomycin and teicoplanin antibiotics. Catalyzes the Claisen condensation of four molecules of malonyl-CoA to yield 3,5-dihydroxyphenylacetyl-CoA (DPA-CoA) and three free coenzyme A (CoA). DpgA requires the presence of the dehydratases DpgB and DpgD to facilitate the aromatization of the DPA-S-DgpA or DPA-S-CoA intermediate.
Interaction partners:
- DpgB
- 
- ATPase
- DNA-directed RNA polymerase subunit beta
- enoyl-CoA hydratase
- DNA-directed RNA polymerase subunit omega
- ATPase
- DNA-directed RNA polymerase subunit alpha
- Sulfurtransferase
- Beta-lactamase
Sequence:
MGVDLQVTVNLDHPELLDAPVLETGVLSAEGRALPTPPRPRIVGVGTAVTRTSYSQQEVLDAFGITDRKVRSIFLNSAIERRNLTLPPMDSDSVRVSESQGDLLDKHKKLAIEMGAEALHACLKRCGAELSDLRHLCCVTSTGFLTPGLSALLIRELGIDRHCSRSDIVGMGCNAGLNALNVVAGWSAAHPGELAVVLCAEACSAAYTMDSTMRTAVVNSLFGDGAAAVALLAGPGGATPATSEGPTVLKFASCIIPEAVDAMRYDWDRTQGRFSFFLDPQIPYVVGAHAETVVDRLLSGTGLRRSDIGHWLVHSGGKKVIDAVVVNLGLTRHDVRHTIGVLRDQGNVSSGSFLFSYERLLEEGITRPGEYGVLMTMGPGSTIETALVQW