wanglab/gogpt-training-data huggingface dataset:
Protein: Histone H2B (Q75VN4)
Organism: Zhangixalus schlegelii (Japanese gliding frog) (Rhacophorus schlegelii)
Function: Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
Subcellular location: Nucleus {ECO:0000269|PubMed:14651982}. Secreted {ECO:0000269|PubMed:14651982}. Chromosome {ECO:0000269|PubMed:14651982}.
Interaction partners:
Sequence:
MPEPAKSAPAAKKGSKKAVSKVQKKDGKKRRKSRKESYAIYVYKVLKQVHPDTGISSKAMSIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSAK
Protein: RNA-binding protein MEX3A (RING finger and KH domain-containing protein 4) (A1L020)
Organism: Homo sapiens (Human)
Function: RNA binding protein, may be involved in post-transcriptional regulatory mechanisms.
Subcellular location: Cytoplasm {ECO:0000269|PubMed:17267406}. Nucleus {ECO:0000269|PubMed:17267406}. Cytoplasm, P-body {ECO:0000269|PubMed:17267406}. Note=Predominantly expressed in the cytoplasm and shuttles between the cytoplasm and the nucleus through the CRM1 export pathway.
Interaction partners:
- mRNA-decapping enzyme 1A
- Protein argonaute-2
- Laminin subunit alpha-2
- Heterogeneous nuclear ribonucleoprotein K
Sequence:
MPSLVVSGIMERNGGFGELGCFGGSAKDRGLLEDERALQLALDQLCLLGLGEPPAPTAGEDGGGGGGGAPAQPAAPPQPAPPPPPAAPPAAPTAAPAAQTPQPPTAPKGASDAKLCALYKEAELRLKGSSNTTECVPVPTSEHVAEIVGRQGCKIKALRAKTNTYIKTPVRGEEPVFMVTGRREDVATARREIISAAEHFSMIRASRNKSGAAFGVAPALPGQVTIRVRVPYRVVGLVVGPKGATIKRIQQQTNTYIITPSRDRDPVFEITGAPGNVERAREEIETHIAVRTGKILEYNNENDFLAGSPDAAIDSRYSDAWRVHQPGCKPLSTFRQNSLGCIGECGVDSGFEAPRLGEQGGDFGYGGYLFPGYGVGKQDVYYGVAETSPPLWAGQENATPTSVLFSSASSSSSSSAKARAGPPGAHRSPATSAGPELAGLPRRPPGEPLQGFSKLGGGGLRSPGGGRDCMVCFESEVTAALVPCGHNLFCMECAVRICERTDPECPVCHITATQAIRIFS
Protein: Iodotyrosine deiodinase 1 (EC 1.21.1.1) (Iodotyrosine dehalogenase 1) (C9JXJ9)
Organism: Homo sapiens (Human)
Interaction partners:
Sequence:
MYFLTPILVAILCILVVWIFKNADRSMEKKKGEPRTRAEARPWVDEDLKDSSDLHQAEEDADEWQESEENVEHIPFSHNHYPEKEMVKRSQEFYELLNKRRSVRFISNEQVPMEVIDNVIRTAGTAPSGAHTEPWTFVVVKDPDVKHKIRKIIEEEEEINYMKRMGHRWVTDLKKLRTNWIKEYLDTAPILILIFKQVHGFAANGKKKVHYYNEISVSIACGILLAALQVNNGITMRHQTARHRHLIEGPGRSSEACSKLSSQGCPGFYC
Protein: glucose-6-phosphate 1-epimerase (EC 5.1.3.15) (Q9LVC5)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Interaction partners:
- Glucose-6-phosphate isomerase 1, chloroplastic
- Glucose-6-phosphate isomerase, cytosolic
- Probable phosphoglucomutase, cytoplasmic 1
- Phosphoglucomutase, chloroplastic
- Probable phosphoglucomutase, cytoplasmic 2
- Transketolase-1, chloroplastic
- Transketolase-2, chloroplastic
- Aldolase-type TIM barrel family protein
- NADP-dependent glyceraldehyde-3-phosphate dehydrogenase])
- transaldolase
Sequence:
MATERHHFELAKGINGLDKIVLRESRGRSAEVYLYGSHVTSWKNENGEELLHLSSKAIFKPPKPIRGGIPLCFPQFSNFGTLESHGFARNRIWEVEANPPPLPLNSCSSAFVDLILRPTEDDLKIWPNNFEFRLRIALGTEGELTLTSRIRNTNSDGKPFTFTFAYHTYFSVSDISEVRVEGLETLDYLDNLKDRERFTEQGDAITFESEVDKIYLSTPTKIAILDHEKKRTFVIRKDGLADAVVWNPWDKKSKTISDLGDEDYKHMLCVEAAAIERPITLKPGEEWKGRLELSAVPSSYSSGQLDPKKVLE
Protein: [histone H3]-trimethyl-L-lysine(27) demethylase (EC 1.14.11.68) (A0A8I5ZTM6)
Organism: Rattus norvegicus (Rat)
Subcellular location: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
Interaction partners:
Sequence:
MPVKFDILRISGNEEKKMAAEKARGEGEEGSFSLTVEEKKALCGLDSSFFGFLSLCKDGVKMKTLLNKAIHCYESLIVKAEGKVESDFFCQLGHFNLLLEDYSKALSSYQRYYSLQTDYWKNAAFLYGLGLVYFYYNAFQWAIRAFQEVLYVDPNFCRAKEIHLRLGFMFKVNTDYESSLKHFQLALRDSNVCTLSSVESKYLKYHSAKAAYEQLLQIESLPSQVKATVLQQLGWMHHNMDLVGDNTTKERYAIQYLQKSLEEDPNSGQSWYFLGRCYSCIGKVQDAFVSYRQSIDKSEASADTWCSIGVLYQQQNQPMDALQAYICAVQLDHGHAAAWMDLGILYESCNQTQDAIKCYLNATRSKSCSNTSVLISRIKFLQAQLCNLPQSSLQNKTKLLPSIEEAWSLPIPAELTSRQGAMNTAQQNVSDSWNSVHTASHHPVQQQVYTQCFTTQKLQGLGKDQQRPFQTGSTRYIHAACVDNQNQNGNHTLPQNSKGDTQNHSSLHIPTSEEQKIFNFTKESKDSRSKSLSPKTSRQDRDTSNIYVNAKEHSKNIHEITSVPISSLNNEDSVSPNLIIVDNPQLSVLVGEAMDSVDHDSRTCDKVNNVHPTLHKKPDNLTASSPSSASSTETLSLKVTEQMHTHIVTSFISPNSGLDTINGGPENSESSISVSVGLRPRPQIIPSMSVSIYSSSTEVLKACRNLGKNGLSNGHILLDICPPPRPPTSPYPPLPKEKLNPPTPSIYLENKRDAFFPPLHQFCINPKNPVTVIRGLAGALKLDLGLFSTKTLVEANNEHIVEVRTQFLQPADENWDPSGTKKIWRYENKSSHTTIAKYAQYQACSFQESLREENERKTQVKDYSDNESTCSDISRRRQKVPFKTIKCGINIDLSDNKKWKLQLHELTKLPAFVRVVSAGNLLSHVGYTILGMNSVQLCMKVPGSRIPGHQENNNFCSVNINIGPGDCEWFVVPEDYWGVLNDFCEKNNLNFLMSSWWPNLEDLYEANVPVYRFIQRPGDLVWINAGTVHWVQAIGWCNNITWNVGPLTAFQYKLAVERYEWNKLQSIKSVVPMVHLSWNMARNIKVSDPKLFEMIKYCLLKILKQCQTLREALVAAGKEVLWHGRINDEPAPYCSICEVEVFNLLFVTNESNSQKTYIVHCQNCARKTSGNLENFVVLEQYKMEDLIQVYDQFTLVSDLKCHYIFNWV
Protein: Conserved oligomeric Golgi complex subunit 1 (COG complex subunit 1) (Component of oligomeric Golgi complex 1) (Q8WTW3)
Organism: Homo sapiens (Human)
Function: Required for normal Golgi function.
Subcellular location: Golgi apparatus membrane {ECO:0000305|PubMed:11980916}; Peripheral membrane protein {ECO:0000305|PubMed:11980916}; Cytoplasmic side {ECO:0000305|PubMed:11980916}.
Interaction partners:
- Conserved oligomeric Golgi complex subunit 6
- Conserved oligomeric Golgi complex subunit 5
- Conserved oligomeric Golgi complex subunit 2
- Conserved oligomeric Golgi complex subunit 4
- Conserved oligomeric Golgi complex subunit 7
- Conserved oligomeric Golgi complex subunit 8
- Conserved oligomeric Golgi complex subunit 3
- Golgi SNAP receptor complex member 2
- Syntaxin-16
- Syntaxin-5
Sequence:
MATAATSPALKRLDLRDPAALFETHGAEEIRGLERQVRAEIEHKKEELRQMVGERYRDLIEAADTIGQMRRCAVGLVDAVKATDQYCARLRQAGSAAPRPPRAQQPQQPSQEKFYSMAAQIKLLLEIPEKIWSSMEASQCLHATQLYLLCCHLHSLLQLDSSSSRYSPVLSRFPILIRQVAAASHFRSTILHESKMLLKCQGVSDQAVAEALCSIMLLEESSPRQALTDFLLARKATIQKLLNQPHHGAGIKAQICSLVELLATTLKQAHALFYTLPEGLLPDPALPCGLLFSTLETITGQHPAGKGTGVLQEEMKLCSWFKHLPASIVEFQPTLRTLAHPISQEYLKDTLQKWIHMCNEDIKNGITNLLMYVKSMKGLAGIRDAMWELLTNESTNHSWDVLCRRLLEKPLLFWEDMMQQLFLDRLQTLTKEGFDSISSSSKELLVSALQELESSTSNSPSNKHIHFEYNMSLFLWSESPNDLPSDAAWVSVANRGQFASSGLSMKAQAISPCVQNFCSALDSKLKVKLDDLLAYLPSDDSSLPKDVSPTQAKSSAFDRYADAGTVQEMLRTQSVACIKHIVDCIRAELQSIEEGVQGQQDALNSAKLHSVLFMARLCQSLGELCPHLKQCILGKSESSEKPAREFRALRKQGKVKTQEIIPTQAKWQEVKEVLLQQSVMGYQVWSSAVVKVLIHGFTQSLLLDDAGSVLATATSWDELEIQEEAESGSSVTSKIRLPAQPSWYVQSFLFSLCQEINRVGGHALPKVTLQEMLKSCMVQVVAAYEKLSEEKQIKKEGAFPVTQNRALQLLYDLRYLNIVLTAKGDEVKSGRSKPDSRIEKVTDHLEALIDPFDLDVFTPHLNSNLHRLVQRTSVLFGLVTGTENQLAPRSSTFNSQEPHNILPLASSQIRFGLLPLSMTSTRKAKSTRNIETKAQVVPPARSTAGDPTVPGSLFRQLVSEEDNTSAPSLFKLGWLSSMTK
Protein: Gap junction beta-1 protein (Connexin-32) (Cx32) (GAP junction 28 kDa liver protein) (P08033)
Organism: Rattus norvegicus (Rat)
Function: One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.
Subcellular location: Cell membrane; Multi-pass membrane protein. Cell junction, gap junction.
Interaction partners:
- Gap junction beta-2 protein
- Gap junction protein
- Occludin
- Gap junction alpha-5 protein
- Catenin beta-1
- Proto-oncogene tyrosine-protein kinase Src
- Gap junction alpha-1 protein
- Calmodulin-like protein 4
- Calmodulin-like protein 3
- Calmodulin-1
Sequence:
MNWTGLYTLLSGVNRHSTAIGRVWLSVIFIFRIMVLVVAAESVWGDEKSSFICNTLQPGCNSVCYDHFFPISHVRLWSLQLILVSTPALLVAMHVAHQQHIEKKMLRLEGHGDPLHLEEVKRHKVHISGTLWWTYVISVVFRLLFEAVFMYVFYLLYPGYAMVRLVKCEAFPCPNTVDCFVSRPTEKTVFTVFMLAASGICIILNVAEVVYLIIRACARRAQRRSNPPSRKGSGFGHRLSPEYKQNEINKLLSEQDGSLKDILRRSPGTGAGLAEKSDRCSAC
Protein: FI06460p (GEO10512p1) (Mitochondrial ribosomal protein S18A) (Q9VHQ0)
Organism: Drosophila melanogaster (Fruit fly)
Interaction partners:
- Small ribosomal subunit protein mS40
- GEO10172p1
- Small ribosomal subunit protein mS33
- Small ribosomal subunit protein bS16m
- 28S ribosomal protein S14
- Small ribosomal subunit protein uS12m
- Mitochondrial ribosomal protein S23
- Small ribosomal subunit protein uS15m
- Large ribosomal subunit protein mL42
- Small ribosomal subunit protein mS29
Sequence:
MSFVLQLATRTVRSTIAQVRGVATTMPRQIKEIHEKQENSVKIFEGVNVESPRAHLMLKSACQTKFCPECTLGLDIKHTDVLILSQYVRSDGCMLPRRITGLCHRQQKKMGTLVTMAQKAGLMPNLAPEWSKRDPKKRFGWRKFNKYFLESTIKY
Protein: Ankyrin repeat domain-containing protein 1 (F1NYV8)
Organism: Gallus gallus (Chicken)
Subcellular location: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
Interaction partners:
Sequence:
MMTMKVEELVTGKKTDDKESGSFLPEDFKTGEYEAAVKLEKQDDLRTASDHLSTQVDMAHGKEKKREAELKKKKLQERSKLESLEDLEKIIQLKKKKKCRKVKAPLLKEPEPEVITGPVDIAMFFRAALENKLPVIEKYLSDKGDPNVCDEYKRTALHRACSEGHLEVVKKLVEAGALLELKDMLESTALHWACRGGNLEIVKFLLDKGINRNARDKLRSTPLHVAVRTGQYDCAEHLIACEADLNAKDREGDTPMHDAVRLNRYKMVRLLILYGADLTIKNADGKTPMDLVLQWQNGTKELFNNLKNNSYKSAHLNKF
Protein: Glutaredoxin-2 (EC 1.11.1.9) (EC 2.5.1.18) (Glutathione-dependent oxidoreductase 2) (Thioltransferase) (P17695)
Organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Function: Component of the glutathione system which performs several activities such as glutathione-dependent oxidoreductase, glutathione peroxidase and glutathione S-transferase (GST) activity. The disulfide bond functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase. In addition, it is also involved in reducing cytosolic protein- and non-protein-disulfides in a coupled system with glutathione reductase. Required for resistance to reactive oxygen species (ROS) by directly reducing hydroperoxides and for the detoxification of ROS-mediated damage. GRX2 is more active as an oxidoreductase than GRX1. Responsible for the S-glutathionylation of DHBP synthase.
Subcellular location: [Isoform Cytoplasmic]: Cytoplasm {ECO:0000269|PubMed:11958675, ECO:0000269|PubMed:16606613}.; SUBCELLULAR LOCATION: [Isoform Mitochondrial]: Mitochondrion {ECO:0000269|PubMed:11958675, ECO:0000269|PubMed:16606613}.
Interaction partners:
- Thioredoxin-2
- Glutathione reductase
- Thioredoxin-1
- Monothiol glutaredoxin-3
- Peroxiredoxin PRX1, mitochondrial
- Glutathione peroxidase-like peroxiredoxin HYR1
- Monothiol glutaredoxin-5
- Glutaredoxin-8
- Glutathione S-transferase omega-like 2
- Glutathione peroxidase-like peroxiredoxin 1
Sequence:
METNFSFDSNLIVIIIITLFATRIIAKRFLSTPKMVSQETVAHVKDLIGQKEVFVAAKTYCPYCKATLSTLFQELNVPKSKALVLELDEMSNGSEIQDALEEISGQKTVPNVYINGKHIGGNSDLETLKKNGKLAEILKPVFQ
Protein: PDZ domain-containing protein GIPC1 (GAIP C-terminus-interacting protein) (RGS-GAIP-interacting protein) (RGS19-interacting protein 1) (SemaF cytoplasmic domain-associated protein 1) (SEMCAP-1) (Synectin) (Q9Z0G0)
Organism: Mus musculus (Mouse)
Function: Inhibits endothelial cell migration (in vitro). May be involved in G protein-linked signaling (By similarity).
Subcellular location: Cytoplasm {ECO:0000250|UniProtKB:O14908}. Membrane {ECO:0000250|UniProtKB:O14908}; Peripheral membrane protein {ECO:0000250}.
Interaction partners:
- Regulator of G-protein signaling 19
- Neuropilin-1
- Unconventional myosin-VI
- DCC-interacting protein 13-alpha
- Plexin-D1
- Syndecan-4
- Vascular endothelial growth factor receptor 2
- Low-density lipoprotein receptor-related protein 2
- Semaphorin-4C
- Harmonin
Sequence:
MPLGLGRRKKAPPLVENEEAEPSRSGLGVGEPGPLGGSAAGESQMGLPPPPAALRPRLVFHTQLAHGSPTGRIEGFTNVKELYGKIAEAFRLPAAEVMFCTLNTHKVDMDKLLGGQIGLEDFIFAHVKGQRKEVEVFKSEEALGLTITDNGAGYAFIKRIKEGSVIDHIQLISVGDMIEAINGQSLLGCRHYEVARLLKELPRGRTFTLKLTEPRKAFDMISQRSAGGHPGSGPQLGTGRGTLRLRSRGPATVEDLPSAFEEKAIEKVDDLLESYMGIRDTELAATMVELGKDKRNPDELAEALDERLGDFAFPDEFVFDVWGAIGDAKVGRY
Protein: DnaJ homolog subfamily C member 1 (DnaJ protein homolog MTJ1) (Q96KC8)
Organism: Homo sapiens (Human)
Function: May modulate protein synthesis.
Subcellular location: Endoplasmic reticulum membrane {ECO:0000250}; Single-pass type I membrane protein {ECO:0000250}. Nucleus membrane; Single-pass type I membrane protein. Microsome membrane {ECO:0000250}; Single-pass type I membrane protein {ECO:0000250}.
Interaction partners:
- Endoplasmic reticulum chaperone BiP
- Alpha-1-antichymotrypsin
- Chymotrypsinogen B2
- Chymotrypsinogen B
- Translocation protein SEC63 homolog
Sequence:
MTAPCSQPAQLPGRRQLGLVPFPPPPPRTPLLWLLLLLLAAVAPARGWESGDLELFDLVEEVQLNFYQFLGVQQDASSADIRKAYRKLSLTLHPDKNKDENAETQFRQLVAIYEVLKDDERRQRYDDILINGLPDWRQPVFYYRRVRKMSNAELALLLFIILTVGHYAVVWSIYLEKQLDELLSRKKREKKKKTGSKSVDVSKLGASEKNERLLMKPQWHDLLPCKLGIWFCLTLKALPHLIQDAGQFYAKYKETRLKEKEDALTRTELETLQKQKKVKKPKPEFPVYTPLETTYIQSYDHGTSIEEIEEQMDDWLENRNRTQKKQAPEWTEEDLSQLTRSMVKFPGGTPGRWEKIAHELGRSVTDVTTKAKQLKDSVTCSPGMVRLSELKSTVQNSRPIKTATTLPDDMITQREDAEGVAAEEEQEGDSGEQETGATDARPRRRKPARLLEATAKPEPEEKSRAKRQKDFDIAEQNESSDEESLRKERARSAEEPWTQNQQKLLELALQQYPRGSSDRWDKIARCVPSKSKEDCIARYKLLVELVQKKKQAKS
Protein: Anti-sigma-E factor RseA (Regulator of SigE) (Sigma-E anti-sigma factor RseA) (L0T905)
Organism: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Function: An anti-sigma factor for extracytoplasmic function (ECF) sigma factor SigE. ECF sigma factors are held in an inactive form by an anti-sigma factor.
Subcellular location: Cytoplasm {ECO:0000305}.
Interaction partners:
- Uncharacterized protein
- ECF RNA polymerase sigma factor SigE
- Uncharacterized protein Rv0093c
- Sec-independent protein translocase protein TatB
- ATP-dependent Clp protease ATP-binding subunit ClpC1
- Probable serine protease HtrA1
- Anti-sigma-D factor RsdA
- Uncharacterized protein Rv1109c
- Possible conserved membrane protein
- Transmembrane protein
Sequence:
MADPGSVGHVFRRAFSWLPAQFASQSDAPVGAPRQFRSTEHLSIEAIAAFVDGELRMNAHLRAAHHLSLCAQCAAEVDDQSRARAALRDSHPIRIPSTLLGLLSEIPRCPPEGPSKGSSGGSSQGPPDGAAAGFGDRFADGDGGNRGRQSRVRR
Protein: Phosphatidylinositol glycan anchor biosynthesis class U protein (Cell division cycle protein 91-like 1) (Protein CDC91-like 1) (GPI transamidase component PIG-U) (Q9H490)
Organism: Homo sapiens (Human)
Function: Component of the GPI transamidase complex. May be involved in the recognition of either the GPI attachment signal or the lipid portion of GPI.
Subcellular location: Endoplasmic reticulum membrane {ECO:0000305}; Multi-pass membrane protein {ECO:0000305}.
Interaction partners:
- GPI-anchor transamidase component PIGS
- GPI-anchor transamidase component GPAA1
- GPI-anchor transamidase component PIGT
- GPI-anchor transamidase
- GPI ethanolamine phosphate transferase 3, catalytic subunit
- GPI inositol-deacylase
- GPI ethanolamine phosphate transferase, stabilizing subunit
- Myosin-7B
Sequence:
MAAPLVLVLVVAVTVRAALFRSSLAEFISERVEVVSPLSSWKRVVEGLSLLDLGVSPYSGAVFHETPLIIYLFHFLIDYAELVFMITDALTAIALYFAIQDFNKVVFKKQKLLLELDQYAPDVAELIRTPMEMRYIPLKVALFYLLNPYTILSCVAKSTCAINNTLIAFFILTTIKGSAFLSAIFLALATYQSLYPLTLFVPGLLYLLQRQYIPVKMKSKAFWIFSWEYAMMYVGSLVVIICLSFFLLSSWDFIPAVYGFILSVPDLTPNIGLFWYFFAEMFEHFSLFFVCVFQINVFFYTIPLAIKLKEHPIFFMFIQIAVIAIFKSYPTVGDVALYMAFFPVWNHLYRFLRNIFVLTCIIIVCSLLFPVLWHLWIYAGSANSNFFYAITLTFNVGQILLISDYFYAFLRREYYLTHGLYLTAKDGTEAMLVLK
Protein: Sulfoquinovose isomerase (SQ isomerase) (EC 5.3.1.31) (Sulfoquinovose-sulfofructose isomerase) (SQ-SF isomerase) (P32140)
Organism: Escherichia coli (strain K12)
Function: Catalyzes the isomerization of sulfoquinovose (SQ) to 6-deoxy-6-sulfo-D-fructose (SF). In vitro, can also catalyze the interconversion of mannose, fructose and glucose, or lyxose and xylulose, but has extremely low activity with glucose.
Interaction partners:
- Uncharacterized protein YihR
- Sulfofructosephosphate aldolase
- Sulfofructose kinase
- 3-sulfolactaldehyde reductase
- Sulfoquinovosidase
- HTH-type transcriptional repressor CsqR
- Oligoribonuclease
- Putative 2,3-dihydroxypropane-1-sulfonate exporter
- Putative sulfoquinovose importer
Sequence:
MKWFNTLSHNRWLEQETDRIFDFGKNSVVPTGFGWLGNKGQIKEEMGTHLWITARMLHVYSVAAAMGRPGAYSLVDHGIKAMNGALRDKKYGGWYACVNDEGVVDASKQGYQHFFALLGAASAVTTGHPEARKLLDYTIEIIEKYFWSEEEQMCLESWDEAFSKTEEYRGGNANMHAVEAFLIVYDVTHDKKWLDRAIRVASVIIHDVARNNHYRVNEHFDTQWNPLPDYNKDNPAHRFRAFGGTPGHWIEWGRLMLHIHAALEARCEQPPAWLLEDAKGLFNATVRDAWAPDGADGIVYTVDWEGKPVVRERVRWPIVEAMGTAYALYTVTGDRQYETWYQTWWEYCIKYLMDYENGSWWQELDADNKVTTKVWDGKQDIYHLLHCLVIPRIPLAPGMAPAVAAGLLDINAK
Protein: Peptidase E (EC 3.4.13.21) (Alpha-aspartyl dipeptidase) (Asp-specific dipeptidase) (Dipeptidase E) (P0A7C6)
Organism: Escherichia coli (strain K12)
Function: Hydrolyzes dipeptides containing N-terminal aspartate residues. May play a role in allowing the cell to use peptide aspartate to spare carbon otherwise required for the synthesis of the aspartate family of amino acids.
Subcellular location: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00510}.
Interaction partners:
- N
- Cytosol non-specific dipeptidase
Sequence:
MELLLLSNSTLPGKAWLEHALPLIAEQLQGRRSAVFIPFAGVTQTWDDYTAKTAAVLAPLGVSVTGIHSVVDPVAAIENAEIVIVGGGNTFQLLKQCRERGLLAPITDVVKRGALYIGWSAGANLACPTIRTTNDMPIVDPQGFDALNLFPLQINPHFTNALPEGHKGETREQRIRELLVVAPELTIIGLPEGNWITVSKGHATLGGPNTTYVFKAGEEAVPLEAGHRF
Protein: UPF0714 protein YndL (O31815)
Organism: Bacillus subtilis (strain 168)
Subcellular location: Cell membrane {ECO:0000305}; Single-pass membrane protein {ECO:0000305}.
Interaction partners:
- Uncharacterized membrane protein YndK
- PGA biosynthesis protein CapC
- PGA synthase CapB
Sequence:
MKPAKVSLLRRLLHSLKHVDCNIAKRFPSTIKIVKLLMIFMVFTPISSIYAEDVYQNFEELKNNEDPSDYGVVTKETGSPVLVLAIHGGGIEGGTSEVARELSKEYSMYLFEGLKSAGNSVLHITSTHFDEPRALKMTGNHEYVISLHGYAEEDQQIEVGGTDRVRAADLVEKLQHAGFPAVLLNMDHPHAGVSPNNIANKSKTGLSIQIEMSTGFRKSLFGIFSLKSRAVTQNERFYEFTEVMFRFLKNSY
Protein: Collagen alpha-1(XXIV) chain (Q30D77)
Organism: Mus musculus (Mouse)
Function: Involved in osteoblast differentiation.
Subcellular location: Secreted, extracellular space, extracellular matrix.
Interaction partners:
Sequence:
MHLGAYRTRHGKVSPTTETKLFLRFIVLCVVWISVHAQGQGIDILQQLGLGGRDVRYTSSVTAVPSSSWSTPLPQGVHLTDFGVILTDNAYIESPLVNILPISLRQPLTVLIGLQSFKVNNAFLFSIRNNNRLQFGVQLLPKKLIVHVGGKQTVTFNYSAHDERWHSFAITVDHHVISMFVECGKRHFSGETTSDVQTFDPHSVFTLGSINNSSAHFEGTVCQLEIMPSTAASAEYCRHLKQQCLRADASQAQRNLPHTAGMPTRHPAHTPLPRGFPGTDSPQKRFTEQDSLPKGFDGTELPRETFADGKSIPNNRSNGSATVHESQEHQTPRAQLTSFHSGNISAVTLPNYRIQAKEITTKEETNLTLSVAHHLPSEARMNEEGRINPLFAGFDNITQHEEAAGLPLPKKASSGFAHTNQDTMKNLEKALTANLYTNELIEMERILNSTLYRVMYGPSVDNHLELRKEGEFYPDATNPIEGSYEPQAYDYYSYEDYNAVLDMEYLRGPKGDPGPPGPPGPMGIPGPSGKRGPRGIPGPHGNPGLPGLPGPKGPKGDPGLSPGQAASGEKGDPGLLGLVGPPGLQGAKGLKGHPGLPGLRGEHGLPGLAGNIGSPGYPGRQGLAGPEGNPGSKGVRGFIGSPGEVGQLGPEGERGTPGVRGKKGPKGRQGFPGDFGDRGPAGLDGSPGLVGGTGPPGFPGVTGSVGPAGPTGPPGAPGPMGLSGSRGPSGIKGDKGEQGVAGEPGEPGYPGDKGNIGSPGPPGIRGKSGPSGQPGDPGPQGPSGPPGPEGFPGDIGIPGQNGPEGPKGHLGNRGPPGPPGLKGTQGEEGPIGPFGELGSRGKPGRKGYMGEPGPEGLKGEVGDQGDIGKTGETGPVGLPGEVGITGSIGEKGERGSPGPLGPQGEKGVMGYPGPPGAPGPMGPLGLPGLVGARGAPGSPGPKGQRGPRGPDGLAGDQGGHGAKGEKGNQGKRGLPGLPGKAGSPGERGVQGKPGFQGLPGSSGDVGPAGEPGPRGLPGIAGLPGEMGVEGPPGTEGDSGLQGEPGAKGDGGPAGSAGATGEPGPRGEPGAPGEEGLQGKDGLKGAPGGSGLPGEDGDKGEMGLPGTAGPVGRPGQMGLPGPEGIVGTPGQRGRLGKKGDKGQVGPTGEAGSRGPPGSVGENGPKGARGTRGAVGPLGLMGPEGEPGIPGYRGHQGQPGPSGLPGPKGEKGYPGEDSTVLGPPGPPGEPGPMGEQGETGEHGEEGYKGHMGVPGLRGATGQQGPPGEPGDQGGQGPKGERGSEGPQGKRGVPGPSGKPGIPGVPGFPGPKGLQGYPGVDGMSGYPGKPGLPGKQGLLGVPGSPGRTGVAGSPGPQGGKGASGPPGSPGAPGPKGEQGLPGQPGVPGQRGHRGTPGDQGLRGAPGLKGQPGEHGDQGLAGFQGFPGPRGPEGDAGIVGIVGPKGPIGQRGNTGPLGREGIIGPTGGTGPRGEKGFRGETGPQGPRGQPGPPGPPGAPGPRRQMDINAAIRALIESNSAQQMESYQNTEGTLISHSSDIFKTLTYLSSLLSSIKNPLGTRENPARICKDLLSCQYKVSDGKYWIDPNLGCSSDAFEVFCNFSAGGQTCLSPVSVTKLEFGVSKVQMNFLHLLSSEATHTITIHCLNTPRWSSTWADGPELPISFKGWNGQIFEENTLLEPQVLSDDCKIQDGSWHKAKFLFHTQNPNQLPVTEVQNLPHLGTEQKRYIESNSVCFL
Protein: NAC transcription factor (V9P4U0)
Organism: Suaeda liaotungensis
Subcellular location: Membrane {ECO:0000256|ARBA:ARBA00004167}; Single-pass membrane protein {ECO:0000256|ARBA:ARBA00004167}. Nucleus {ECO:0000256|ARBA:ARBA00004123}.
Interaction partners:
Sequence:
MGALIIREPGALSTPFETLPLGFRFKPTDVELIDHYLRLKINGKEDDVACIKEVDICKVEPWDLPDLSAIQTNDHEWFYFCPRDRKYPNGQRSNRATEAGYWKATGKDRTIKSRKLGEIGMKKTLVFYTGRAPKGQRTHWVIHEYRTTLEELDGSHPGQGAFVLCRLFKKADDIKPDDNDDASHSDDVVTNVPSPNPTNISQEDIRSEHAVVQASPLSVVKNADSFTSDTVYPDRLQMNEEMAHEASPLSVVMSENCAVKNADSFTSDTMYPDRLQMNEEMAHEVDSHLNEPMYFYDPPEAYFNWQPTNANQGPVGMEEIFSADIGDSRYGLQYKT
Protein: Retinaldehyde binding protein 1 (D3Z956)
Organism: Rattus norvegicus (Rat)
Interaction partners:
- NADP-retinol dehydrogenase
- Retinol dehydrogenase 5
- Retinoid isomerohydrolase
- Retinol dehydrogenase 10
- Acyltransferase
Sequence:
MSEGVGTFRMVPEEEQELRAQLEQLTTKDHGPVFGPCSQLPRHTLQKAKDELNEREETRDEAVRELQELVQAQAASGEELAVAVAERVQARDSAFLLRFIRARKFDVGRAYELLKGYVNFRLQYPELFDSLSMEALRCTIEAGYPGVLSSRDKYGRVVMLFNIENWHCEEVTFDEILQAYCFILEKLLENEETQINGFCIVENFKGFTMQQAAGLRPSDLKKMVDMLQDSFPARFKAIHFIHQPWYFTTTYNVVKPFLKNKLLQRVFVHGDDLDGFFQEIDENILPADFGGTLPKYDGKVVAEQLFGPRVEVENTAL
Protein: DNA-directed RNA polymerase (EC 2.7.7.6) (Q385J0)
Organism: Trypanosoma brucei brucei (strain 927/4 GUTat10.1)
Interaction partners:
- rRNA adenine N
- rRNA adenine N
- High mobility group protein, putative
- DNA-directed RNA polymerase subunit beta
- Aconitate hydratase
Sequence:
MRRLSLAPIKWSAIAQRWGTRGTDVPSRAKGAIKSPKSRKSRLPYVEVGERTDRMKEFVSSGTDDNSGDSDNNHNSVKSINNTDCRNKGTDGGGEIDMDTVAGTDAFTPTVDMEEGYGAPVMATTGSTSSESVLSVIDVLCDDLFSCKTDVLKSFARTRSVSGSTKSELVMNLIDLANREAHGESQDLSITKRVLGDVFNEEVRVSGVRSQWTNKSLEASHIEMACDNHLKFEAMSYTQKTLMVRRNASESSRVLRKLIRPFQQDYNRVAEAAVGGVFRNFKAEADQLVNSMMASEIVTPFSSFLVSYVRFATSGNLLTRTNVIERLEQLELVQIAMDEDSDAVLQRLMALLDDVVAEVERRALCFGGKRTSWGTETPEVLRCSIQAFSDSTAQQHEDLGERVPAWVHDLVRMFNNWEAIVRTDIPVLEDVPRYVFDCILSGVVCYHLLQKIYGDIISPTDVPPTVRGAVKRAMEAHFKDEEKAGHALAKLFAYVQAPGDSGVVKAEFFPAVLSQMQGAFHDVGQSTLHNVRTAIVLREICATVSRCTRTCGLFHMLVKLTEDLRFQFRFSTIFKKLNGRDRTTIRTKYSINMVKTLEYFEQEYAVTPTSTKAVGFIVILLLHMSMCSGAASGHGTKAVLERYISVTNKEEFSIISISDLEATHVRDLRVAFPPQLSYNSWLHQSDTKDKSVYNVLPSVAVKGSTNQAMIISQAPMMKALDAISRVPWRISKYMLHVQEAIVREGYGFGKIRPAFYPLHYCAKSRGDISYESTGMDDDDDKTEVYNLQQRREYELQQDEDWKNLSELRSNRIHYLQALRQARSLVQFSHIYFPNSMDFRGRMYPLPGRLNHTGSDPFRALLEYAEPKPLGKEGLYWLKVHLANKMGMSKLSFDERVHYVNEHIDDVVCSAEQPLYGDKWWQEAAEPMQCLMACKELADALKCSQGPENFLSRIPVAVDGSYNGLQHYSAIGRDAFGATLVNLVPSERPADAYTGILKEMMSSIKADAERDHPVAQRCLGTGKGQDRDHIKRKTIKRPIMTQVYGVTGYGMSEQILDELVKQNKNHGLWTSTDMREMADYLREKVLESLGITFRETQNCRRWITDVTNIIWEVQPAELRTALCWTTPLGLVVRQPYKMRKEMMIFTVHGCARVPANAFSAASRKQLTAIAPNLIHSLDASHLAMTAIEMQNLGLSMMAVHDSYWTYACDLPTLSRVLREQFVTLYGKYDPLWELKEQWEEAYFMDLRRHGKVLPDPPKRGDLDLNVVLNSPYFFS
Protein: LD23072p (Partner of drosha, isoform A) (Partner of drosha, isoform C) (Q9V9V7)
Organism: Drosophila melanogaster (Fruit fly)
Interaction partners:
- Ribonuclease 3
- Endoribonuclease Dcr-2
- Protein argonaute-1
- Endoribonuclease Dcr-1
- LD26789p
- LD06392p
- Protein Loquacious
- N
- Protein argonaute-2
- N
Sequence:
MAEKPLADCPDSGQVRKRPRLEDEEQELKVAGFSLSAIEEMRRTRDNELQNEPMDQQLRQFQVLDEVGSGSDEDDESDNASEQQGGRYGEGGDEEEEAADGDGEEYDSSEFDDDEIENLLDEKLPEELRESKQPKYEQRFKTVLEEKRLNHFEVLPEGWVQVTHNSGMPLFLHRKTRVCCASRPYFLGTGSARKHAVPLGAIPCLNYRRALEEESEVEQQKTDGAPPVAVCPMAGASALPAEAMDVEGKENNEGSTDSKTQPDGITALMPAAKIVTVNENTQKESITPEQLNTYCQKLFKFKVIRVLRFRSWNARRKFTKNRKHIKNIQRPTLPDGTKLIKFPILANAGEGSTNPRGRKEWIMNPNGKSFVCILHEYVQHALKTQPTYEFKELQNAATPYSATVSVNNLKYGTGYGTSKKQAKSEAARETLEILIPDVKDKITGNNKDQKSGTAKKAQSDLSVFDDIRIEDPRVTEFCNKTTEPSPNAILLTCLQRNYGSDVQISQEINRTANNKNEFTMTVGKHTAKVVCKNKREGKQLASQAILQILHPHIQTWGSLLRLYGNNSIKTFKEKKLEEQEITVLQSKAAVNQPNYAILDKLKSEMLKLCAKQESVLTMGTFVPPSDVDLPTSSGSNLNNVEL
Protein: Protein CYSTEINE-RICH TRANSMEMBRANE MODULE 6 (AthCYSTM6) (Q9SKX9)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Involved in resistance to abiotic stress.
Subcellular location: Cell membrane {ECO:0000269|PubMed:29272523}; Single-pass membrane protein {ECO:0000255}. Cytoplasm {ECO:0000269|PubMed:29272523}.
Interaction partners:
- Small polypeptide DEVIL 10
- AT1G25275 protein
- Secreted transmembrane peptide 5
- Transmembrane protein
- At3g13845
- AT4g05070 protein
- Protein RALF-like 24
- Succinate dehydrogenase assembly factor 4
- Transmembrane protein
- Small polypeptide DEVIL 6
Sequence:
MSQYSQNQSSGAYPTPPVSTGPYVAPPPLGYPTNDTSHATVATVETKSKGDGFLKGCLAAMCCCCVLDACF