wanglab/gogpt-training-data huggingface dataset:
Protein: UV excision repair protein RAD23 (Q580M6)
Organism: Trypanosoma brucei brucei (strain 927/4 GUTat10.1)
Subcellular location: Nucleus {ECO:0000256|RuleBase:RU367049}. Cytoplasm {ECO:0000256|RuleBase:RU367049}.
Interaction partners:
- DNA-repair protein, putative
- Proteasome regulatory non-ATP-ase subunit 10
- Polyubiquitin, putative
- 26S proteasome regulatory subunit 4 homolog
- Telomerase-associated protein, putative
- Katanin p60 ATPase-containing subunit A-like 2
- 26S proteasome regulatory non-ATPase subunit
- Proteasome regulatory non-ATP-ase subunit 9
- 40S ribosomal protein S25
- 40S ribosomal protein S24
Sequence:
MKLIAKLGGGGSGNNTKELTISNPEATLNNLRTVIAINFRLPLGSFRLQHATFDLNDDKRLLRNIGIQDGDTITVVAKHEREESGSGSGKSKENGSAVPPPPTTAGTMEGNSEAVTGVEKSGTEEADGDEESEFDENDGSDGSDDDDDDDDGQEAMLARLFEVPNLIEMRQRFLADPEGVLRQISADDPVLLELIAKNRQAFLDLVCNDNFFEELQRDREEGVMTTEEDEEFDEEMLEEVMSQFLAAASDLDDEAVVEQQDEDGSETQRYLDRVPTEVEEEKIEQLMQLGFTREQCKVAFFKAKRSIERAANLLFENPPQL
Protein: Guanine nucleotide-binding protein subunit beta (P18851)
Organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Function: Implicated in the a- and alpha-factor response pathway. The beta and gamma chains of the putative yeast mating response pathway G protein play a positive role in initiation of the mating response. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.
Interaction partners:
- Pheromone alpha factor receptor
- Cell division control protein 24
- Serine/threonine-protein kinase STE20
- Protein STE5
- Guanine nucleotide-binding protein subunit gamma
- Guanine nucleotide-binding protein alpha-1 subunit
- Protein SST2
- Mitogen-activated protein kinase FUS3
- Cyclin-dependent kinase inhibitor FAR1
- Serine/threonine-protein kinase STE7
Sequence:
MAAHQMDSITYSNNVTQQYIQPQSLQDISAVEDEIQNKIEAARQESKQLHAQINKAKHKIQDASLFQMANKVTSLTKNKINLKPNIVLKGHNNKISDFRWSRDSKRILSASQDGFMLIWDSASGLKQNAIPLDSQWVLSCAISPSSTLVASAGLNNNCTIYRVSKENRVAQNVASIFKGHTCYISDIEFTDNAHILTASGDMTCALWDIPKAKRVREYSDHLGDVLALAIPEEPNSENSSNTFASCGSDGYTYIWDSRSPSAVQSFYVNDSDINALRFFKDGMSIVAGSDNGAINMYDLRSDCSIATFSLFRGYEERTPTPTYMAANMEYNTAQSPQTLKSTSSSYLDNQGVVSLDFSASGRLMYSCYTDIGCVVWDVLKGEIVGKLEGHGGRVTGVRSSPDGLAVCTGSWDSTMKIWSPGYQ
Protein: Lipoxygenase (EC 1.13.11.-) (Q93WZ2)
Organism: Gossypium hirsutum (Upland cotton) (Gossypium mexicanum)
Interaction partners:
Sequence:
MLSHLLHAVAGDDNGNKKMKPEKIKGTVILMKKNVLDFNDFHASFLDGFHELLGKRVSFQLISSQHVDADNGLQGKLGKEAYLEDWNSTETSAVAGESKFDVNFDFEEEIGLPGAFLIKNNHHSEFYLKTLTLEHVPGHGRFHFVCNSWVYPDKKYDNPRVFFTNKTYLPHDMPKPLLQYREQELMALRGNGQGELQEWDRVYDYAYYNDLGNPDKGPEYARPVLGGSAKYPYPRRGRTGRPPTKSDPKTESRIPLLMSLNIYVPRDERFGHLKMSDFLAYALKSIVQFIVPELQDLTDKTHNEFDSLEDVLELYYGGVKLPSGPLLDNIINNIPLEMLKEIFRTDGAQLLKFPVPQVIQDSKTAWRTDEEFAREMLAGVNPVIIRLLQEFPPTSNLDPKVYGNQNSAITKEHIEHNLEGLTVEEALRTNRLFILDHHDSLMPYLRRINTTTTKTYASRTILLLRNDGTLKPLVIELSLPHPNGDQLGAVSKVYTPAEHGVEGSIWQLAKAYVAVNDSGVHQLISHWLNTHAAMEPFVIATNRQLSVVHPIYKLLYPHFRDTMNINAFARQILINGGGVLELTVFPGKYAMEMSSVIYKSWNLLDQALPRDLKKRGVAVDDKSSPHGLRLLIKDYPYAVDGLEIWFAIEKWVRDYCSFYYKTDEMVQQDPELQAWWKELREEGHGDKKDEPWWPKMQTREELIDSCTIIIWVASALHAAVNFGQYPYAGYLPNRPTISRRFMPEKGTPEYTELESNPDKVFLKTITAQLQTLLGISLIEILSRHSSDEVYLGQRASPEWTSDETPLAAFDEFGKRLTGIEERIVEMNNDEQLKNRVGPVNMPYTLLYPTSEGGLTGKGIPNSVSI
Protein: Cell division cycle protein Cdc20, putative (AFU_orthologue AFUA_1G14730) (Q5BF66)
Organism: Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) (Aspergillus nidulans)
Interaction partners:
- Mitotic spindle checkpoint protein
- Uncharacterized protein
- Spindle assembly checkpoint protein SLDB
- Spindle assembly checkpoint component MAD1
- 20S cyclosome subunit
- Anaphase-promoting complex subunit 4
- Negative regulator of mitosis
- Anaphase-promoting complex subunit 5
- Anaphase promoting complex subunit 10
- Anaphase-promoting complex subunit 2
Sequence:
MATPLVSTPVKTHHGLFSTKMAGGRMPLTPSPGGRRDSIASNNSSPFTPPRLESESTKEQARSVYGGNLSSYFAKSVSRSSRAYRESPKSNIARVRKSPKHLELGVSEWSLTGTGPSSNQTPPKERLRKEVPSRARAGKTTVRISHNAGDRFIPNRSASEGLVTAGAAKPEETQRPKTSSGDKGSSVLASAASAFDIGGRGTDEDLTAALENLGLDDDDNSSSYSKPAPDAVAYESSLANACGVNLNTRILAFKPPPPESSKPIDLRAQYNRPLKSTKSNSAQFRRRVQTAPERVLDAPGLLDDYYLNLLDWSSGNQVAIGLERNVYVWSADSGSVSCLLETSPDTYISSVKWSGDGAYVGVGLGTGEVQIWDVEEGTKLRSMFGHESRVGVMGWSKHTLSTGARSGLVFNHDVRIAQHKVAELVSHTSEVCGLEWRSDGAQLATGGNDNLVNIWDARSLSAPKFTKTNHRAAVKALSWCPWQLNLLATGGGSYDRHIHFWNTTTGARTNSIDTGSQVTSLRWSNHYREIVSSSGFPDNSLSIWSYPTLVRNIEIPAHETRVLHSCLSPDGQLLATAAADESLKFWKVFERKPGTSASASREGGVGSKAQMTKSMTIR
Protein: Flocculation protein FLO9 (Flocculin-9) (P39712)
Organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Function: Cell wall protein that participates directly in adhesive cell-cell interactions during yeast flocculation, a reversible, asexual and Ca(2+)-dependent process in which cells adhere to form aggregates (flocs) consisting of thousands of cells. The lectin-like protein sticks out of the cell wall of flocculent cells and selectively binds mannose residues in the cell walls of adjacent cells.
Subcellular location: Secreted, cell wall {ECO:0000305|PubMed:15470092}. Membrane {ECO:0000305}; Lipid-anchor, GPI-anchor {ECO:0000305}. Note=Covalently-linked GPI-modified cell wall protein (GPI-CWP).
Interaction partners:
- Flocculation protein FLO11
Sequence:
MSLAHYCLLLAIVTLLGLTNVVSATTAACLPANSRKNGMNVNFYQYSLRDSSTYSNAAYMAYGYASKTKLGSVGGQTDISIDYNIPCVSSSGTFPCPQEDLYGNWGCKGIGACSNNPIIAYWSTDLFGFYTTPTNVTLEMTGYFLPPQTGSYTFKFATVDDSAILSVGGSIAFECCAQEQPPITSTNFTINGIKPWNGSPPDNITGTVYMYAGFYYPMKIVYSNAVAWGTLPISVTLPDGTTVSDDFEGYVYTFDNNLSQPNCTIPDPSNYTVSTTITTTEPWTGTFTSTSTEMTTVTGTNGVPTDETVIVIRTPTTASTIITTTEPWNSTFTSTSTELTTVTGTNGVRTDETIIVIRTPTTATTAITTTEPWNSTFTSTSTELTTVTGTNGLPTDETIIVIRTPTTATTAMTTTQPWNDTFTSTSTELTTVTGTNGLPTDETIIVIRTPTTATTAMTTTQPWNDTFTSTSTELTTVTGTNGLPTDETIIVIRTPTTATTAMTTTQPWNDTFTSTSTEITTVTGTNGLPTDETIIVIRTPTTATTAMTTTQPWNDTFTSTSTEMTTVTGTNGLPTDETIIVIRTPTTATTAITTTEPWNSTFTSTSTEMTTVTGTNGLPTDETIIVIRTPTTATTAITTTQPWNDTFTSTSTEMTTVTGTNGLPTDETIIVIRTPTTATTAMTTTQPWNDTFTSTSTEITTVTGTNGLPTDETIIVIRTPTTATTAMTTTQPWNDTFTSTSTEMTTVTGTNGVPTDETVIVIRTPTSEGLISTTTEPWTGTFTSTSTEMTTVTGTNGQPTDETVIVIRTPTSEGLVTTTTEPWTGTFTSTSTEMTTITGTNGQPTDETVIIVKTPTTAISSSLSSSSGQITSFITSARPIITPFYPSNGTSVISSSVISSSDTSSLVISSSVTSSLVTSSPVISSSFISSPVISSTTTSASILSESSKSSVIPTSSSTSGSSESETGSASSASSSSSISSESPKSTYSSSSLPPVTSATTSQEITSSLPPVTTTKTSEQTTLVTVTSCESHVCTESISSAIVSTATVTVSGATTEYTTWCPISTTEITKQTTETTKQTKGTTEQTTETTKQTTVVTISSCESDVCSKTASPAIVSTSTATINGVTTEYTTWCPISTTESKQQTTLVTVTSCGSGVCSETTSPAIVSTATATVNDVVTVYSTWRPQTTNEQSVSSKMNSATSETTTNTGAAETTTSTGAAETKTVVTSSISRFNHAETQTASATDVIGHSSSVVSVSETGNTKSLTSSGLSTMSQQPRSTPASSMVGSSTASLEISTYAGSANSLLAGSGLSVFIASLLLAII
Protein: Trans-acting enoyl reductase (EC 1.3.1.-) (P9WGV5)
Organism: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Function: Involved in the reduction of the double bond between C-4 and C-5 during phthiocerol dimycocerosates (DIM A) and glycosylated phenolphthiocerol dimycocerosates (PGL) biosynthesis.
Interaction partners:
- Phthiodiolone/phenolphthiodiolone dimycocerosates ketoreductase
- Phthiotriol/phenolphthiotriol dimycocerosates methyltransferase
- Enoyl-[acyl-carrier-protein] reductase
Sequence:
MSPAEREFDIVLYGATGFSGKLTAEHLAHSGSTARIALAGRSSERLRGVRMMLGPNAADWPLILADASQPLTLEAMAARAQVVLTTVGPYTRYGLPLVAACAKAGTDYADLTGELMFCRNSIDLYHKQAADTGARIILACGFDSIPSDLNVYQLYRRSVEDGTGELCDTDLVLRSFSQRWVSGGSVATYSEAMRTASSDPEARRLVTDPYTLTTDRGAEPELGAQPDFLRRPGRDLAPELAGFWTGGFVQAPFNTRIVRRSNALQEWAYGRRFRYSETMSLGKSMAAPILAAAVTGTVAGTIGLGNKYFDRLPRRLVERVTPKPGTGPSRKTQERGHYTFETYTTTTTGARYRATFAHNVDAYKSTAVLLAQSGLALALDRDRLAELRGVLTPAAAMGDALLARLPGAGVVMGTTRLS
Protein: Phosphodiesterase (EC 3.1.4.-) (A0A509ANR4)
Organism: Plasmodium berghei (strain Anka)
Interaction partners:
- Phosphodiesterase
- Phosphodiesterase
- Guanylate cyclase beta
- AMP deaminase
- Ham1-like protein, putative
- Adenylate kinase isoenzyme 6 homolog
- Adenylosuccinate lyase
- Nucleoside-diphosphatase, putative
- GMP synthase
- GTP:AMP phosphotransferase, putative
Sequence:
MDEENEKHMKKITTGLIKRKFCIFPQFTAKKNEIKYNILRDYNVKEYIYIHLVVSLLVILIEFVSFSFNLSKKDATLMEIFVFIFSVLNCIMHIIVIIKFHFFSPRNIYSKSLFIGYIIINQIFQFLSLYFFTKKNEEFKGESIQIVTYNNKLSLYIHFFIDSVCIICLPTLKYIISVIFMILYASGTAILILLTNFKKEENSSELISMYILSVVLMMFIFLRYLAEKRNRILLYIVNEFLQNNYKANNYTKTQCNNENESISVDIDKEDDKAYNSKMLFSDKSLFFKDFTINSCYKDFCSISYFLKKISISNNHILKIEKNKENTGPEKTFDEIKKRLNESDILQIAYEAEVLKNIKKINSDEIGRNWDYSFIDSEYGKSTLVILEVGYHLISPYIENNENKKHKLKLFLLLINSMYFPNPYHNANHGATVCHLSKCLAHITDFDKHLNNTYMICYLIASIAHDVGHPGKTNAYLSETNHILSIRYNDMSILENYHCSITFSILQLIGFDFLINNEDTKLVDKNNYTNMRKFIIELIISTDMKLHFEYLDIFKKRKRSENFDVADRDAINLGTINIKLADIGHTCLKWRDHAKWTMLVSEEFFSQKKVEEIYRKNKDTDPNNFNGILNDKSIDNAMIFNYENIYINYSNNINNINKYHFSYIKLNFIHHHDFVKSIPSTQVYFFEIIVMPLIQELQSIEQANKEITHKVLHNLNVNLKTWKLLEKNINLFYNTDKMKGTDYYKNLEKQQLLRGIRLLDIAEEDVISLTKNIFNEKSMEKPDEDKKKEKKNKR
Protein: Aminoaldehyde dehydrogenase 1, peroxisomal (MdAMADH1) (EC 1.2.1.-) (Aminobutyraldehyde dehydrogenase AMADH1) (EC 1.2.1.19) (A0A0E3T552)
Organism: Malus domestica (Apple) (Pyrus malus)
Function: Dehydrogenase that catalyzes the oxidation of several aminoaldehydes. Metabolizes and detoxifies aldehyde products of polyamine degradation to non-toxic amino acids (Probable). Catalyzes the oxidation of 4-aminobutanal and 3-aminopropanal to 4-aminobutanoate and beta-alanine, respectively.
Subcellular location: Cytoplasm, cytosol {ECO:0000269|PubMed:26296314}.
Interaction partners:
Sequence:
MAIQIPSRLLFIDGEWREPVLKKRIPIINPATEEIIGHIPAATAEDVELAVEAARRALSRNKGRDWASAPGAVRAKYLRAIAAKIGERKPEIAKLEAIDCGKPLDEAAWDIDDVSGCFEYYAELAEGLDAQQKAPISLPMEQFKSHVLKEPIGVVGLITPWNYPLLMATWKVAPALAAGCAAILKPSELASVTCLELADVCREVGLPPGVLNILTGLGHEAGAPLVSHPHVDKIAFTGSTMTGSKIMTAAAQLVKPVSLELGGKSPIVVFDDVDIDKAAEWTAFGCFWTNGQICSATSRLILHENIATEFLDRLLKWCKNIKIADPLEEGCRLGPVVSGGQYEKILKSIETAKSEGARVLSGGDRPEHLKKGFFIEPTIITDVTTSMQIWREEVFGPVLCVKTFSSEDEALELANDTHYGLGAAVISKDLERCDRFSKGLQAGIVWINCSQPCFCQAPWGGNKRSGFGRELGKWGLDNYLTVKQVTEYVSDDPWGWYTSPSKL
Protein: Mitochondrial Rho GTPase (EC 3.6.5.-) (A0A0G2K8T2)
Organism: Rattus norvegicus (Rat)
Subcellular location: Mitochondrion outer membrane {ECO:0000256|ARBA:ARBA00004200, ECO:0000256|PIRNR:PIRNR037488}; Single-pass type IV membrane protein {ECO:0000256|ARBA:ARBA00004200, ECO:0000256|PIRNR:PIRNR037488}.
Interaction partners:
Sequence:
MRAGRVRPLRASDMKKDVRILLVGEPRVGKTSLIMSLVSEEFPEEVPPRAEEITIPADVTPERVPTHIVDYSEAEQSDEQLHQEISQANVICIVYAVNNKHSIDKVTSRWIPLINERTDKDSRLPLILVGNKSDLVEYSSMETILPIMNQYTEIETCVECSAKNLKNISELFYYAQKAVLHPTGPLYCPEEKEMKPACIKALTRIFKISDQDNDGTLNDAELNFFQRICFNTPLAPQALEDVKNVVRKHLSDGVADSGLTLRGFLFLHTLFIQRGRHETTWTVLRRFGYDDDLDLTPEYLFPLLKIPPDCTTELNHHAYLFLQSTFDKHDLDRDCALSPDELKDLFQVFPYIPWGPDVNNTVCTNESGWITYQGFLSQWTLTTYLDVQRCLEYLGYLGYSILTEQESQASAITVTRDKKIDLQKKQTQRNVFRCNVIGVKGCGKTGVLQSLLGRNLMRQKKIRDDHKSYYAINTVYVYGQEKYLLLHDISESEFLTEAEIVCDVVCLVYDVTNPKSFEYCARIFKQHFMDSRIPCLIVAAKSDLHEVKQEHSVSPTDFCRKHKMPPPQAFTCNTADAPSKDIFVKLTTMAMYPEDHYRGSLSRDMGSTDRIENLRKIWVFLKTALHVTQADLKSSTFWLRASFGATVFAVVGFAMYRALLKQR
Protein: Syntaxin-72 (AtSYP72) (Q94KK6)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Vesicle trafficking protein that functions in the secretory pathway.
Subcellular location: Membrane {ECO:0000250}; Single-pass type IV membrane protein {ECO:0000250}.
Interaction partners:
- Novel plant SNARE 12
- Novel plant SNARE 11
- Novel plant SNARE 13
- Syntaxin-81
- 25.3 kDa vesicle transport protein SEC22-1
- At3g24315
- Syntaxin-52
- Syntaxin-51
- Syntaxin-73
- Vesicle-associated membrane protein 727
Sequence:
MPVIDIIFRVDEICKKYDKYDIDKHREIGASGDDAFSRLFTSIDSDIEAVLRKAELASTEKNRAAAVAMNAEVRRTKARLAEDVVKLQKLAVKKIKGLTREERESRCDLVIALADRLQAIPDGNEHGAKQANSDWGGASAPNKNIKFDMSEEDMDDGFFQQSEESSQFRQEYEMRRKKQDEGLDIISEGLDALKNLARDMNEELDKQVPLMEEMETKVDGATSDLKNTNVRLKKQLVQMRSSRNFCIDIILLCVILGIVSYIYNALN
Protein: Serine/threonine protein kinase (A0A1D8PI07)
Organism: Candida albicans (strain SC5314 / ATCC MYA-2876) (Yeast)
Interaction partners:
- Mitogen-activated protein kinase HOG1
Sequence:
MKRKQQQQPQQYQQPFSTATANENPFQQASNETPDSINVITPNDIINEYQQPDQEPQQYYPQQQQQQQDPYQQETQFQQQQQGVYTNYNQSDVTLNDKNADYNRVASQLVEEENEQRKKSVKYPNLENYQILDQMGEGAFSVVYKAKHLSTGKEVAVKILRKFQMDQAQKQAVLKEVTIMRQLDHPNIVRFIEFIDSPTYYYIVQELVPGGEIFTMIVKYTYLSEDLSRWVITQIAHAIRYLHEEVGIVHRDIKPENLLYVPIDLKPSANPISKLRKSDDPNTKLDEGEFVNGVGGGGIGTVKLADFGLSKQIWEHNTKTPCGTVGYTAPEIVRDERYSKEVDMWALGCVLYTLLCGFPPFYDERIETLTEKVAKGEFTFLKPWWDEISDGAKNCVGRLLTVDPKKRYTIDEFLQDPWMQKTSLSQQPQIPIPVTNQYPPATKVAHPIQVANNRYSKKFRSTNSDLYSPAAVALRDAFDISTAVHRMGEEAALQTKKQAPIEGLIEEEEEEHEETVTKDGRVVQDTYNQVLRTHRHRHHLKNNNNPNAFDLNLGGASIIERRKNKQIPIQSS
Protein: Black, isoform A (EC 4.1.1.-, EC 4.1.1.11, EC 4.1.1.15) (Black, isoform B) (Glutamate decarboxylase) (LP11089p) (Q24062)
Organism: Drosophila melanogaster (Fruit fly)
Interaction partners:
- glutaminase
- (S)-3-amino-2-methylpropionate transaminase (GABA aminotransferase) (Gamma-amino-N-butyrate transaminase) (L-AIBAT)
- Cysteine dioxygenase
- Aldehyde dehydrogenase type III, isoform Q
- Glutamate dehydrogenase, mitochondrial
- Glutamine synthetase 1, mitochondrial
- Glutamine synthetase 2 cytoplasmic
- aldehyde dehydrogenase
- Glutamate synthase
- Glutamate dehydrogenase
Sequence:
MLASENFPTHHFKESIFKPYSTTSGDDLASVSPLTATAALVASTSSPADSTSTVAFEQASKMLANAANNNNNNNNNITSTKDDLSSFVASHPAAEFEGFIRACVDEIIKLAVFQGTNRSSKVVEWHEPAELRQLFDFQLREQGESQDKLRELLRETIRFSVKTGHPYFINQLYSGVDPYALVGQWLTDALNPSVYTYEVAPLFTLMEEQVLAEMRRIVGFPNGGQGDGIFCPGGSIANGYAISCARYRHSPESKKNGLFNAKPLIIFTSEDAHYSVEKLAMFMGFGSDHVRKIATNEVGKMRLSDLEKQVKLCLENGWQPLMVSATAGTTVLGAFDDLAGISEVCKKYNMWMHVDAAWGGGALMSKKYRHLLNGIERADSVTWNPHKLLAASQQCSTFLTRHQQVLAQCHSTNATYLFQKDKFYDTSFDTGDKHIQCGRRADVFKFWFMWKAKGTQGLEAHVEKVFRMAEFFTAKVRERPGFELVLESPECTNISFWYVPPGLREMERNREFYDRLHKVAPKVKEGMIKKGSMMITYQPLRQLPNFFRLVLQNSCLEESDMVYFLDEIESLAQNL
Protein: Katanin p60 ATPase-containing subunit A1 (Katanin p60 subunit A1) (EC 5.6.1.1) (p60 katanin) (A0A0B4KFL3)
Organism: Drosophila melanogaster (Fruit fly)
Subcellular location: Cytoplasm, cytoskeleton, spindle {ECO:0000256|ARBA:ARBA00004186, ECO:0000256|HAMAP-Rule:MF_03023}. Cytoplasm {ECO:0000256|HAMAP-Rule:MF_03023}. Cytoplasm, cytoskeleton, microtubule organizing center, centrosome {ECO:0000256|HAMAP-Rule:MF_03023}. Cytoplasm, cytoskeleton, spindle pole {ECO:0000256|HAMAP-Rule:MF_03023}. Note=Predominantly cytoplasmic. Also localized to the interphase centrosome and the mitotic spindle poles. Enhanced recruitment to the mitotic spindle poles requires microtubules and interaction with KATNB1. {ECO:0000256|HAMAP-Rule:MF_03023}.
Interaction partners:
- Katanin p80 WD40 repeat-containing subunit B1
- Kinesin-like protein Klp10A
Sequence:
MSITQHLEKLTHSSALIGTNLCLSFLATMTTTCSDRQLLRGGKQKTTTCVGMTVMAKTTFEEICENAKLARDMALTGNYDSACIYYEGLQGLLARQLKATADPLRKGKWSMINQQISQEHAKIKAIQRTLQDISLDLQSTKFAHKLRHQLSEESTTSKDPSAWFKPDPDIWTPPPKDPDVWGPPKPPPTTQAVGRRAAPNNRRTTPATQNSRPSSTIPQSTARNGPASTRNSRNSTSATAPSGGARTTNGRAGGRKLSTSNTNEARDDDSTAAGNNGGAAGDGENGDPQAAQEEERKFQPNNHIEAELVDILERDILQKDPKVRWSDIADLHDAKRLLEEAVVLPMLMPDYFKGIRRPWKGVLMVGPPGTGKTMLAKAVATECGTTFFNVSSATLTSKYRGESEKMVRLLFEMARFYAPSTIFIDEIDSLCSRRGSESEHEASRRVKSELLVQMDGVGGGEEQAKVVMVLAATNFPWDIDEALRRRLEKRIYIPLPSDEGREALLKINLREVKVDDSVDLTYVANELKGYSGADITNVCREASMMSMRRKIAGLTPEQIRQLATEEVDLPVSNKDFNEAMSRCNKSVSRADLDKYEKWMREFGSS
Protein: Ciliary neurotrophic factor (CNTF) (P51642)
Organism: Mus musculus (Mouse)
Function: CNTF is a survival factor for various neuronal cell types. Seems to prevent the degeneration of motor axons after axotomy.
Subcellular location: Cytoplasm.
Interaction partners:
- Leukemia inhibitory factor receptor
- Ciliary neurotrophic factor receptor subunit alpha
- Interleukin-6 receptor subunit beta
- Interleukin-27 receptor subunit alpha
- Interleukin-6 receptor subunit alpha
- Leptin
- Erythropoietin
- Granulocyte colony-stimulating factor
- Prolactin
- Prolactin-5A1
Sequence:
MAFAEQSPLTLHRRDLCSRSIWLARKIRSDLTALMESYVKHQGLNKNISLDSVDGVPVASTDRWSEMTEAERLQENLQAYRTFQGMLTKLLEDQRVHFTPTEGDFHQAIHTLTLQVSAFAYQLEELMALLEQKVPEKEADGMPVTIGDGGLFEKKLWGLKVLQELSQWTVRSIHDLRVISSHHMGISAHESHYGAKQM
Protein: Blue-sensitive opsin (Blue cone photoreceptor pigment) (P28682)
Organism: Gallus gallus (Chicken)
Function: Visual pigments are the light-absorbing molecules that mediate vision. They consist of an apoprotein, opsin, covalently linked to cis-retinal.
Subcellular location: Membrane; Multi-pass membrane protein.
Interaction partners:
Sequence:
MHPPRPTTDLPEDFYIPMALDAPNITALSPFLVPQTHLGSPGLFRAMAAFMFLLIALGVPINTLTIFCTARFRKLRSHLNYILVNLALANLLVILVGSTTACYSFSQMYFALGPTACKIEGFAATLGGMVSLWSLAVVAFERFLVICKPLGNFTFRGSHAVLGCVATWVLGFVASAPPLFGWSRYIPEGLQCSCGPDWYTTDNKWHNESYVLFLFTFCFGVPLAIIVFSYGRLLITLRAVARQQEQSATTQKADREVTKMVVVMVLGFLVCWAPYTAFALWVVTHRGRSFEVGLASIPSVFSKSSTVYNPVIYVLMNKQFRSCMLKLLFCGRSPFGDDEDVSGSSQATQVSSVSSSHVAPA
Protein: Zizimin, isoform K (M9PCG3)
Organism: Drosophila melanogaster (Fruit fly)
Interaction partners:
- HL01515p
- Cdc42 homolog
- RE68558p
- Ras-related protein Rac1
Sequence:
MERKFTRGLNKLGSAVQMRENVSQLVRESAVLNKPLVVEPIDFEAFIAKNKTVIQNDPQRELLIYPTDDVSEIIMPRKQRTNAKSVADRFDPPNEAIVCPLHGPSMITNGNGHSQVSRQGSIQSNGSHHNGNGNGHTSSSSSSSLNNSNGHGQLSRKSSQCSNGSSSQKDSSYESALSSITLRSNLAQPEEVDEFADDGNAEDLVDGQPHGSRAECTRFTRQALYTYRAKNHLIHYKYNAYGGNCHDLPSISPAEELVEEIYEIDADQDRIDEQMTRSQADTITKQGYLLKGPDSASDRMFANIGNKSFKRRYCYLRQEIDGTYILELHKDEKQGEAKATIVMDFCTDVVQNPKRGRFCFELRMTTGHKSFTLAAENEQDFKDWLSKISSVLAQNRAQEEKRNASLERHPSIGSNPSPQLQPPAMDPPTFGTLKGLDQSLHPQLMKYGRETDHSIALARREQRRRLFACYQSPVKGSGSDNVEQYREHFGTRLLLTCHNLRFRLQCIPQDESSAGGVEQQVEPYITSLALFDAKANRKLSENFYFNVNEQWAAQLLPNTPVPSSVAGCGVPRKSAEGDERSTACQAPHSLFDGVSAELLRSNRQQFQQLRQCLLSVTAPHADIYLVVRIEKILQSGIAQVTEPYLKAGKDPKLGQKVYKAAKSYAQHIGHYRQPFAWAARPLFKQYSHELDVDPKREFEFSPIYRQEIPKLKDEELLKLLVDYRKPEKLSKLTIIPGSLKMQMQFLDQTTPCGLSKSLAPLSTFSPSSKQSPTVEVAEFQSQSERDAHPYTSFCNHLYVYPLSLQFDSQKLFSRARNITVVVELRDGDGEYSKPLKCIYGRPGQDLLVSQIACPVLHHNVTPTWYEEIKLRLPLGLFPEHHLLFSFYHVSCNLSKKRDANAAFETPIGYAWLPLLQKNRICLEEQQLPVAATLPVGYLSIQPLGWGKGNCGPDIQWIDNQRNLYTVGLRLDSTVLTADQHLHNFFGHCERLLEGGKTGAVPAETETCKILKAAHAIDMKSLINYLPTVLNELFTLLVHTQSEEIGLNVIRLITNIIHLISDQAKRSDLLGAYVKYVFHAPYYSQQTARQRTVHGELCRHLPYLLNPSNPDFLIVNKFMRYSSIFFDLIIKSMAQHLLATGRIRMLRNERFPKEYGDRVEQLIKALMPYITTRFEDLSEETHLLNRSLAKFVRQCLSYMDRGFVFRLIRCYMGEFSPGNPRILHEYKFNFLQEICQHEHYVPLNLPFVLNPKNRPPEMMQHFTLSEQFCRQHFLSGLLLQELKSSLNEVGHVRRHALGIFKDLLAKHELDNRYQQKGQLSRIALLYVPWLGVVMDNIHRIDDLSESGACTPNGHVYADSASYTKRLSCSSSYVFSKDSSTFGSLTSTPRSKNRLTMHCDQASPYRTSVHMKEHNYLAAIAGQPISNGISNLSLNSNTDSGHSQDTTTIGAYTNGDTDVALRNGHNRSVSVTHAQILSRCDKFSSVESKDLLLGFLFIIKHLSQEQMIGWWQNCNESETLQFLSILDLCLLQFRYVGKKSVVITTETRQGRLAKANTLPARTQPPTGLENGSQEQQPSSGTLNQTREHLLEDIDTLARNQLALYESNLATEVGMIILDCLGLYVLQFRQLLADSLVLPKVARVYLRFLQLGQSERLSKHVFAALRAFINNYAVALFKGNAMLCGQMVYELLKACDSRLVEIRHESCAVLYLLMRSNFEFSGRKALTRVHLQVIISVSQMIGNVIGLNNARFQESLSIINSYANSDKAMKGTGFPMEVKDLTRRVRTVLMATAQMQAHHMDPERLLELQYSLANSYASTPELRHTWLVTMARNHEQNGNLSEAACCHLHIAALMCEYLRLKGGCTLSWSSTAFGKISTNIPLDEQGLKLDAGAQDSQYTEQMLLEQLKLCADFLDRAERFECLGELYKLILPMYERDRSYQDLAHCYEHLTQAYNKIVEVNRSGKRMLGRFYRVVFYGLMYFEEDHAIEFVYKEPKLTSLSEISERLAKQYKEKFGADVVKMIMDSSPVKVDELDAKLAYIQVTHVIPFFSKDELDQRLNEFEQNHDVDTFMYETPFTKSGAARGSVEEQWKRKTVIKTQYSFPYVLKRIPVKSREIIELSPIEVAIDEMQSKVSELEEIILPPADVKKLQLRLQGSVAVTVNAGPLAYAHAFLDAKVVNNFSMDRVGDLKDVFRDFIVVCQKALFLNERIISADQKEYHHVLKENYEKLCQALSELLDDESFQPLGDDADSINQRNSMALFNAISGASHNSRPYFVDQNTSNSTHHHSSHINTQNSTHHS
Protein: Type-4 uracil-DNA glycosylase (EC 3.2.2.27) (UDG1) (Q97WF1)
Organism: Saccharolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) (Sulfolobus solfataricus)
Function: Removes uracil bases that are present in DNA as a result of either deamination of cytosine or misincorporation of dUMP instead of dTMP. Can remove uracil from double-stranded DNA containing either a U/G or U/A base pair as well as from single-stranded DNA.
Interaction partners:
- Type-5 uracil-DNA glycosylase
- 3-oxoacyl-
- DNA polymerase IV
Sequence:
MDNLDLIADEVRKCQKCKLWKFRKNAVPGEGNSKAEIMFIGEAPGENEDIEGKPFVGVAGKLLTRLINEILGLSREDVFITNLVKCRPPNNRDPEEDEILACSPYLTRQIESIRPHIIITLGRHSTSYLFKKMNMKMESIGKVRGKFYTWNIYGYKILVFPTYHPAAALYNPPIRKVLEEDFRKVKEALSSKPITLDNFLYGSGDKGEKGNSNSGK
Protein: C-type lectin domain family 10 member A (MMGL) (Macrophage asialoglycoprotein-binding protein 1) (M-ASGP-BP-1) (Macrophage galactose/N-acetylgalactosamine-specific lectin) (P49300)
Organism: Mus musculus (Mouse)
Function: Recognizes terminal galactose and N-acetylgalactosamine units. May participate in the interaction between tumoricidal macrophages and tumor cells. Plays a role in the recruitment of inflammatory monocytes to adipose tissue in diet-induced obesity.
Subcellular location: Membrane; Single-pass type II membrane protein.
Interaction partners:
Sequence:
MIYENLQNSRIEEKTQEPGKAPSQSFLWRILSWTHLLLFSLGLSLLLLVVVSVIGSQNSQLRRDLGTLRATLDNTTSKIKAEFQSLDSRADSFEKGISSLKVDVEDHRQELQAGRDLSQKVTSLESTVEKREQALKTDLSDLTDHVQQLRKDLKALTCQLANLKNNGSEVACCPLHWTEHEGSCYWFSESEKSWPEADKYCRLENSHLVVVNSLEEQNFLQNRLANVVSWIGLTDQNGPWRWVDGTDFEKGFKNWAPLQPDNWFGHGLGGGEDCAHITTGGPWNDDVCQRTFRWICEMKLAKES
Protein: Dof zinc finger protein DOF5.6 (AtDOF5.6) (Protein HIGH CAMBIAL ACTIVITY 2) (Protein PHLOEM EARLY DOF HCA2) (Q9FM03)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Transcription factor that binds specifically to a 5'-AA[AG]G-3' consensus core sequence (By similarity). Promotes expression. The PEAR proteins (e.g. DOF2.4, DOF5.1, DOF3.2, DOF1.1, DOF5.6 and DOF5.3) activate gene expression that promotes radial growth of protophloem sieve elements. Involved in the regulation of interfascicular cambium formation and vascular tissue development, particularly at a very early stage during inflorescence stem development; promotes both cambium activity and phloem specification, but prevents xylem specification.
Subcellular location: Nucleus {ECO:0000255|PROSITE-ProRule:PRU00071, ECO:0000269|PubMed:19915089}.
Interaction partners:
- NAC domain-containing protein 71
- WUSCHEL-related homeobox 4
- Leucine-rich repeat receptor-like protein kinase TDR
- Probable leucine-rich repeat receptor-like protein kinase At5g05160
- Leucine-rich repeat receptor-like protein kinase
- Homeobox-leucine zipper protein ATHB-8
Sequence:
MGLTSLQVCMDSDWLQESESSGGSMLDSSTNSPSAADILAACSTRPQASAVAVAAAALMDGGRRLRPPHDHPQKCPRCESTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKPSSSNSSSSTSSGKKPSNIVTANTSDLMALAHSHQNYQHSPLGFSHFGGMMGSYSTPEHGNVGFLESKYGGLLSQSPRPIDFLDSKFDLMGVNNDNLVMVNHGSNGDHHHHHNHHMGLNHGVGLNNNNNNGGFNGISTGGNGNGGGLMDISTCQRLMLSNYDHHHYNHQEDHQRVATIMDVKPNPKLLSLDWQQDQCYSNGGGSGGAGKSDGGGYGNGGYINGLGSSWNGLMNGYGTSTKTNSLV