wanglab/gogpt-training-data huggingface dataset:
Protein: Synaptobrevin homolog ykt6 (O60073)
Organism: Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Subcellular location: Cell membrane {ECO:0000305}; Lipid-anchor {ECO:0000305}; Cytoplasmic side {ECO:0000305}.
Interaction partners:
- Vesicle transport v-SNARE protein vti1
- Protein transport protein gos1
- Integral membrane protein sed5
- Protein transport protein bet1
- Syntaxin pep12
- Protein transport protein sft1
- t-SNARE affecting a late Golgi compartment protein 2
- Protein transport protein sec22
- Syntaxin-like protein fsv1
- Protein sly1
Sequence:
MKLYSVSILRFDPKPVQLLCTASDLSSFSFFQRSSIGEFMNFFTKTVAERTNPGQRQDVEQSNYVFHVYNRSDGLCGVIASDKEYPLRVAYTLLNKILDEFLTKNPRTKWESGAVTLSFPELDTYLSKYQDPKQADTIMRVQQELDETKDVLHKTIESVLARGEKLDDLIQRSDNLSTQSRMFYKSAKKQNSCCIIA
Protein: Alpha-amylase/subtilisin inhibitor (RASI) (P29421)
Organism: Oryza sativa subsp. japonica (Rice)
Function: This protein inhibits independently subtilisin and T.castaneum alpha-amylase but not barley alpha-amylase.
Interaction partners:
Sequence:
MVSLRLPLILLSLLAISFSCSAAPPPVYDTEGHELSADGSYYVLPASPGHGGGLTMAPRVLPCPLLVAQETDERRKGFPVRFTPWGGAAAPEDRTIRVSTDVRIRFNAATICVQSTEWHVGDEPLTGARRVVTGPLIGPSPSGRENAFRVEKYGGGYKLVSCRDSCQDLGVSRDGARAWLGASQPPHVVVFKKARPSPPE
Protein: Nicotinamide-nucleotide adenylyltransferase (EC 2.7.7.1) (EC 2.7.7.18) (A0A8J8Y7I4)
Organism: Rattus norvegicus (Rat)
Interaction partners:
Sequence:
MDSSKKTEVVLLACGSFNPITNMHLRLFELAKDYLNATGSFFRSWGPNPGPWRFLGEYKVIKGIISPVGDAYKKKGLIPAHHRIIMAELATKNSHWVEVDTWESLQKEWVETVKVLRHHQEKLATGSRSHPQSSPVLERPGRKRKWADQKQDSSPQKPQEPKPTGVPRVKLLCGADLLESFSVPNLWKMEDITQIVANFGLICVTRAGSDAQKFIYESDVLWRHQSNIHLVTEWITNDISSTKIRRALRRGQSIRYLVPDLVQEYIEEHDLYNSESEDRNAGVTLAPLQRNTSEAKHNHSTR
Protein: DNA packaging protein UL33 (U5TMQ7)
Organism: Human herpesvirus 1 (HHV-1) (Human herpes simplex virus 1)
Interaction partners:
Sequence:
MAGREGRTRQRTLRDTIPDCALRSQTLESLDARYVSRDGAHNAAVWFEDMTPAELEVVFPTTDAKLNYLSRTQRLASLLTYAGPIKAPDDAAAPQTPDTACVHGELLARKRERFAAVINRFLDLHQILRG
Protein: Potassium-transporting ATPase subunit beta (Gastric H(+)/K(+) ATPase subunit beta) (Proton pump beta chain) (P51164)
Organism: Homo sapiens (Human)
Function: The beta subunit of the gastric H(+)/K(+) ATPase pump which transports H(+) ions in exchange for K(+) ions across the apical membrane of parietal cells. Plays a structural and regulatory role in the assembly and membrane targeting of a functionally active pump (By similarity). Within a transport cycle, the transfer of a H(+) ion across the membrane is coupled to ATP hydrolysis and is associated with a transient phosphorylation of the alpha subunit that shifts the pump conformation from inward-facing (E1) to outward-facing state (E2). Interacts with the phosphorylation domain of the alpha subunit and functions as a ratchet, stabilizing the lumenal-open E2 conformation and preventing the reverse reaction of the transport cycle (By similarity).
Subcellular location: Apical cell membrane {ECO:0000250|UniProtKB:P20648}; Single-pass type II membrane protein {ECO:0000255}. Cell membrane {ECO:0000250|UniProtKB:P18597}; Single-pass type II membrane protein {ECO:0000255}. Note=Localized in the apical canalicular membrane of parietal cells. {ECO:0000250|UniProtKB:P20648}.
Interaction partners:
- Potassium-transporting ATPase alpha chain 1
- Potassium-transporting ATPase alpha chain 2
- Inorganic pyrophosphatase
- Phospholysine phosphohistidine inorganic pyrophosphate phosphatase
- Inorganic pyrophosphatase 2, mitochondrial
- Cobalamin binding intrinsic factor
- Sodium/potassium-transporting ATPase subunit gamma
- Sodium/potassium-transporting ATPase subunit alpha-2
- Sodium/potassium-transporting ATPase subunit alpha-4
- Sodium/potassium-transporting ATPase subunit alpha-3
Sequence:
MAALQEKKTCGQRMEEFQRYCWNPDTGQMLGRTLSRWVWISLYYVAFYVVMTGLFALCLYVLMQTVDPYTPDYQDQLRSPGVTLRPDVYGEKGLEIVYNVSDNRTWADLTQTLHAFLAGYSPAAQEDSINCTSEQYFFQESFRAPNHTKFSCKFTADMLQNCSGLADPNFGFEEGKPCFIIKMNRIVKFLPSNGSAPRVDCAFLDQPRELGQPLQVKYYPPNGTFSLHYFPYYGKKAQPHYSNPLVAAKLLNIPRNAEVAIVCKVMAEHVTFNNPHDPYEGKVEFKLKIEK
Protein: Oncoprotein-induced transcript 3 protein (Liver-specific zona pellucida domain-containing protein) (Q6V0K7)
Organism: Rattus norvegicus (Rat)
Function: May be involved in hepatocellular function and development.
Subcellular location: Nucleus envelope {ECO:0000250}. Note=Can be secreted into blood. {ECO:0000250}.
Interaction partners:
- Stabilin-2
Sequence:
MPLSLLLACLFTTVTLQSPVVLDPCSAYISLNEPWRNTDHQFDESQSQPLCDNHMDGEWYRFTGMAGDAMPTFCIPENHCGTHAPVWLNGSHPLEGDGIVQRQACASFKGNCCLWNTTVEVKACPGGYYVYRLAKPSVCFHIYCGHFYDICDEDCHGSCLDTTECACSPGTSLGPDGQTCFDENECEHNNGGCSEICVNLKNSHRCACGVGRVLRSDGKTCEDIEGCHSNNGGCSHSCLGSEKGYQCECPRGLVLSEDNHTCQVPVLCKSSAIEVSVPRELVGGLELFLTNTSCRGVSNGTHVNIIFSLKTCGTVVDVVNDKIVASNLVTGLPKQTPGSSGDIIIRTSKLLIPVTCEFPRLYTISEGYVPNLRNAPLEIRSRNHGIFPFTLEIFKDHEFEEPYRETLPTLKLRDSLYFGIEPLVHVSGLESLVESCFATPTAKVDEILKYYLIRDGCVSDDSVKQYSSRDHLAKHFQVPVFKFVGKDHKEVFLHCRVLVCGVLDERSRCAQGCHRRVRREAGEDEDSAGLQSQTLTGGPISIDWEE
Protein: Probable E3 ubiquitin-protein ligase HUL4 (EC 2.3.2.26) (HECT ubiquitin ligase 4) (HECT-type E3 ubiquitin transferase HUL4) (P40985)
Organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Function: Probable E3 ubiquitin-protein ligase, component of the TRAMP (TRF4) complex which has a poly(A) RNA polymerase activity and is involved in a post-transcriptional quality control mechanism limiting inappropriate expression of genetic information. Polyadenylation is required for the degradative activity of the exosome on several of its nuclear RNA substrates.
Subcellular location: Nucleus {ECO:0000305}.
Interaction partners:
- Poly
- Protein AIR1
- Protein AIR2
- Poly
- ATP-dependent RNA helicase DOB1
- 26S proteasome regulatory subunit RPN10
Sequence:
MVSLFDKLNAKKDGRDGSVSKELLSHSVAHTKNRLPKSGRRTSERSLAASVKDGSCSNSKSNKRNSSASVSGEEDKSCLISLNCLCCGVPLRFPASITKFRCSACQVTVIVKEPEINSNLESSTHISCTLEGLQMVVRRCHDDLQRLKKTGILDKERKGLIFQPVITYLLDRFHDVSILNRSFLVHDGGKNIKMLNYEVLQRFYSILSNLPTRKPYYSMLCCCNDLLKRITINKGENLQILQYRWLLIILNIPTIRTCLIRDRKSKNVFETQQIRAVSYELAKRCIGYLSNLSTKTSQQLIQSLRRTPTDNFSYQVEILNLYINFQFSRLLSNELSNRTAKNNVKPEDEMRSRLRRHHTTGHEFLSTRPISAQSNDKQGSGFTHPVNNKMKFKFFQYEEDWHIHSAAKLTFIYYVANTRRNGRGALSIQSFYNITLDFIDYKQDFDHWRGVAQKTKMNQLIEEWGNSTTKKCFSFCKYPFILSLGIKISIMEYEIRRIMEHEAEQAFLISLDKGKSVDVYFKIKVRRDVISHDSLRCIKEHQGDLLKSLRIEFVNEPGIDAGGLRKEWFFLLTKSLFNPMNGLFIYIKESSRSWFAIDPPNFDKSKGKNSQLELYYLFGVVMGLAIFNSTILDLQFPKALYKKLCSEPLSFEDYSELFPETSRNLIKMLNYTEDNFEDVFSLTFETTYRNNNWILNDSKSSKEYVTVELCENGRNVPITQSNKHEFVMKWVEFYLEKSIEPQYNKFVSGFKRVFAECNSIKLFNSEELERLVCGDEEQTKFDFKSLRSVTKYVGGFSDDSRAVCWFWEIIESWDYPLQKKLLQFVTASDRIPATGISTIPFKISLLGSHDSDDLPLAHTCFNEICLWNYSSKKKLELKLLWAINESEGYGFR
Protein: Mf5 protein (Myofilin, isoform B) (RE24409p) (Q9VFC7)
Organism: Drosophila melanogaster (Fruit fly)
Interaction partners:
- Myosin light chain alkali
- Troponin I
- Troponin T, skeletal muscle
- Z band alternatively spliced PDZ-motif protein 66, isoform E
- Tropomyosin-2
- Paramyosin, long form
- Muscle-specific protein 20
- Trehalose 6-phosphate phosphatase
- Myosin regulatory light chain 2
- RE20510p
Sequence:
MFKNHLEMIGRNESPSKKAKFWQSYIRSLKGSEDIRAHEAPRASRPYSSYLDSPSYRSIYDEPATANERVQSSGYRYLPVSRDTYGYSPRAIYDHHYSRTIPANYDAEKAWNDHLKRMQEIERRYPSRYGLYLRDKPLTPNSLVPLEYEPEDKLLAELNKARRSASPFRPARTTRAGSEPYVPPPSYWNREGSVPRGGPSVFDRATSLAPFTRPSFRASSLEPLDELFERKLPAIAEADSAPADAPSRPLGIFERAGSPSPTPVKAGRWGPRPTEVAYDAEGLPIFHPRNRFRDLLSPSPNLPISSIVRDPFWWDVDDLVPFRATSVPRASSPVARDSYLSPVKNRYLWSKHPARPLTPEEEDLF
Protein: Riboflavin synthase (EC 2.5.1.9) (Q72CT3)
Organism: Nitratidesulfovibrio vulgaris (strain ATCC 29579 / DSM 644 / CCUG 34227 / NCIMB 8303 / VKM B-1760 / Hildenborough) (Desulfovibrio vulgaris)
Interaction partners:
- Riboflavin biosynthesis protein RibBA
- 6,7-dimethyl-8-ribityllumazine synthase
- Riboflavin biosynthesis protein RibD
- 3,4-dihydroxy-2-butanone 4-phosphate synthase
- Riboflavin biosynthesis protein
- Pyridine nucleotide-disulfide oxidoreductase
- Cytidine/deoxycytidylate deaminase family protein
- Large ribosomal subunit protein bL31
Sequence:
MFTGIIQGQGEVVAVEPMGGETRLRLRALFALDAIVKGESIATNGTCLTVETYGDRWFTAYASSETMQRTNLGDLRQGARVNLERALAVGDRLGGHIVSGHVDCVAEVRSITQAGLSKVYRLGFPSAFGPQVIPKGSVALDGISLTVNHCGPDFLEVNVIPETQGVTTIASWKPGTRVNMETDVIGKYVQNMLAPWNTPHTGEDAPSGRITLDFLRENGF
Protein: Probable feruloyl esterase B (EC 3.1.1.73) (Ferulic acid esterase B) (FAEB) (A2R0Z6)
Organism: Aspergillus niger (strain ATCC MYA-4892 / CBS 513.88 / FGSC A1513)
Function: Involved in degradation of plant cell walls. Hydrolyzes the feruloyl-arabinose ester bond in arabinoxylans as well as the feruloyl-galactose and feruloyl-arabinose ester bonds in pectin.
Subcellular location: Secreted {ECO:0000250}.
Interaction partners:
Sequence:
MKVSSLLSVALPGAALAATDSFQSRCNEFQNKIDIANVTVRSVAYVAAGQNISQAEVASVCKASVQASVDLCRVTMNISTSDRSHLWAEAWLPRNYTGRFVSTGNGGLAGCVQETDLNFAANFGFATVGTNGGHDGDTAKYFLNNSEVLADFAYRSVHEGTVVGKQLTQLFYDEGYNYSYYLGCSTGGRQGYQQVQRFPDDYDGVIAGSAAMNFINLISWGAFLWKATGLADDPDFISADLWSVIHQEIVRQCDLVDGALDGIIEDPDFCAPVIERLICDGTTNGTSCITGAQAAKVNRALSDFYGPDGTVYYPRLNYGGEADSAYLYFTGSMYSRTEEWYKYVVYNDTNWNSSQWTLESAKLALEQNPFNIQAFDPNITAFRDRGGKLLSYHGTQDPIISSTDSKLYYRRVANALNAAPSELDEFYRFFQISGMGHCGDGTGASYIGQGYGTYTSKAPQVNLLRTMVDWVENGKAPEYMPGNKLNANGSIEYMRKHCRYPKHNVHTGPGNYTDPNSWTCV
Protein: DNA repair protein KRE29 (Killer toxin-resistance protein 29) (P40026)
Organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Function: Acts in a DNA repair pathway for removal of UV-induced DNA damage that is distinct from classical nucleotide excision repair and in repair of ionizing radiation damage. Functions in homologous recombination repair of DNA double strand breaks and in recovery of stalled replication forks.
Subcellular location: Nucleus {ECO:0000269|PubMed:14562095}. Cytoplasm {ECO:0000269|PubMed:14562095}.
Interaction partners:
- Structural maintenance of chromosomes protein 5
- Non-structural maintenance of chromosome element 5
- Structural maintenance of chromosomes protein 6
- E3 SUMO-protein ligase MMS21
- Regulator of Ty1 transposition protein 107
- Non-structural maintenance of chromosome element 3
- Non-structural maintenance of chromosome element 4
- Non-structural maintenance of chromosomes element 1
- Large ribosomal subunit protein uL23m
- Large ribosomal subunit protein uL4m
Sequence:
MGSVNSSPNEEFETVPDSQISGFDSPLIPTSVGSYFRDDDDDEKVHPNFISDPENDSLNSDEEFSSLENSDLNLSGAKAESGDDFDPILKRTIISKRKAPSNNEDEEIVKTPRKLVNYVPLKIFNLGDSFDDTITTTVAKLQDLKKEILDSPRSNKSIVITSNTVAKSELQKSIKFSGSIPEIYLDVVTKETISDKYKDWHFISKNCHYEQLMDLEMKDTAYSFLFGSSRSQGKVPEFVHLKCPSITNLLVLFGVNQEKCNSLKINYEKKENSRYDNLCTIFPVNKMLKFLMYFYSDDDNDDVREFFLKAFICLILDRKVFNAMESDHRLCFKVLELFNEAHFINSYFEIVDKNDFFLHYRLLQIFPHLQSALLRRRFSEKQGRTETIQQNIIKEFNEFFDCKNYKNLLYFILTMYGSKFIPFGPKCQVTEYFKDCILDISNETTNDVEISILKGILNLFSKIR
Protein: Rab3 interacting molecule, isoform Y (A0A0B4K677)
Organism: Drosophila melanogaster (Fruit fly)
Subcellular location: Synapse {ECO:0000256|ARBA:ARBA00034103}.
Interaction partners:
Sequence:
MDEMPDLSHLTPHERMQIENVLMRQKQEEEKQNEIMRRKQDEVVTLEMQIRQRSEQQKKAGVELDATCHICLKTKFADGVGHICHYCNIRCCARCGGKVTLRSNKVIWVCILCRKKQELLSKTGQWINKTAAQQDGFIRRIEPDGSSDISQHPIVDPHDTTDKRPKLERTRSAAEKENLPMQRAGSMLRRQYSQQEQPTNRRLSASDSGMDPVMSPGQQMQHHQQQQRARMQPMNPQQAQQGYGMQQQQQPRSGGAYPDDDPRYYQGELDGLMRQHPHLAHPSQVQPQHTPQSHSQQQQSQHQQQHLMPQQHRPSPQQHSQQQQQQQQHSQQFAARQQQHQQQQHQQQVQQSYHAQIHQQPQQHPHPHSQQQQHHQQMQHQHGQSVPQMGGYQKPPPLTRNLTISGGHAMDSSAYSQQQQQQQRRALAGSQYASQQQRSFSSSEEEFQHQLLAAQGAVTVTAGSDYDGNFGGVQGVQTVLSPGDLQIHANNPVNWQTSADNTRLIGHMILRKYYDGEDILGLKVNGGQPLATGGSVSGAGTGAAIGAGGPCGAIVEKVKRGSVADLEGRIRPGDEILEWNGRGLHNKSADEVYDIIDESRLDAQVELIVSRPIGSGGGSGGSSANVSPISGASGGSANSVPARRSSANFPHSGLASSMAGSAVVSSGGRYLQRKAPAVEAIEIHRDKPSVLITSPGSPDIHTSVSGPGSVSGSGLRQRGGVGQTQRLGPSHSTHSHSSSGSGSGSGSSTSSVHAPASAHGPVHASASASGSAPGGLHGTTTAGHHHHPHPHHYHPHQHPLPHPHQHQGPPAAHLQGHGVGGGIGMGSGSGTTTQPIPIEGRLQLKLGYDQNTLQLIVTLVCATGLSLRQSGAGRNPYAKVFLLPDRSHKSKRRTKTVGTTCEPRWGQTFVYSGLRRCDLNGRLLEVTLWDYVRYGANDFIGEVVIDLAHHILDDEAEWYQLQPHQDTSYLLRDEGSDVDGLILTPTDHLSPPSTMSRLSDSDTTSDCDIDGMTPGASISSMGSSASPPPLLELDLNERRSRRDMSPQGRKRVAGMVARDYRTVSGIGQSYHNQASATGYYRRGGGNGVGSAIGPGGMSLSQRSHSAAPSDGYHSSGVGGAASGGPAYGYRSTSPRRGSLSPPDDRYIDYPVLPVHGSSPNAPSVYQGPGGVSSAAASASQQQRFQSRSATATPTGSPKKRQLPQVPQTSRSAMLRDRLGQDFDERLASGGRFGRHRTRQPHHQATYRSTGMGGWERHYTGLSDSDLHSMDARMRPRHSLSPDKDFMGEFGDSDMESVVSVTSSAFSTQSERPRTSRGLSEYDKDKNGAEEAGGSKSAEGAGAEDKVDGSLSDTANDRKKGGGVDQERSPKGGSGMGKKSNSTSQLSATEQEQYQAQFAIAGSSTSSAGHHHITLPPPHPYHQRQSRGSAGSIQRSVEVPPVPPVTRYSAGSIHSITSSEGSSFSPSLRNDGALNEFVDGLGPGQLVGRQVLGAPSLGDIQLSLCHQKGCLEVEVIRARGLQQKAQSKMLPAPYVKVYLVSGKRCVDKMKTSSARRTLDPLYQQQLVFKQSYTGCILQITVWGDYGRIEKKVFMGVAQIMLDDLNLSNIVIGWYKLFGTTSL
Protein: Protein CAF130 (130 kDa CCR4-associated factor) (P53280)
Organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Function: Acts as component of the CCR4-NOT core complex, which in the nucleus seems to be a general transcription factor, and in the cytoplasm the major mRNA deadenylase involved in mRNA turnover.
Subcellular location: Cytoplasm {ECO:0000305}. Nucleus {ECO:0000305}.
Interaction partners:
- General negative regulator of transcription subunit 5
- General negative regulator of transcription subunit 1
- General negative regulator of transcription subunit 4
- General negative regulator of transcription subunit 2
- Protein CAF40
- General negative regulator of transcription subunit 3
- Exosome complex component SKI6
- Exosome complex component RRP42
- Poly
- Nascent polypeptide-associated complex subunit beta-2
Sequence:
MTKKKAATNYAERQNLASEDSSGDSVHFKDFIPLQELLKDKNYVPSVENLEKILYNETMFNDQKICSNLLLEALIITLFTTISGKSALRLIQTSSLKERKSWAQSFENNSSSYASIVLSWKDNDILLLKFLRFLLANKTAPLQINRYNLPEYKLPLSFLIVSKITIPSILLNETYNLLKDYLYSITGRIESLISCSSTFDKPALVVRKILKDYNRMIECRNFYFWYSFNAENRVNLTFSDNISLLMENDEGNAGSGLDDSRFDHQKQPREAIMGRTINDQEQIYSFELNQDGTLEIPNVMEHSLLRHELLFKILNLTTVLTPLLELQFSTLCGLVDPLMQPTPNDKHIISIDFLFQLFLGLMSQSIKTSQEHNDHYDWKFYMCFNMQKIIDATMLRLNCFDFDILNSVNNTDNAVHWKTQLHRWLPHGLNTQDLELLYMIDILAVYTIYKLYEKIPIQLNPFLFSLISLWKNLSCVILLALEIDRIEEENGTYETPLMVRATIRGAAALRSVIATVLNGLVKNNDHDFKHESLNTFMSPYGRKLCHGALYADLRSHTASLLALGASIEDVTDLFADLQSGDRFDEDIRYMFDYECEDYDESFSESDHGGLDESVVNPTEKIASGSNNVFFRRRCNCIFNDDKLVAEDGANEAFGSTNSENVEGAMHNNRNAVHNATTATSDHVVTSPNPLSVRSRSTFEFDYSGEDWRDVPRDFNMYYSPSYSFIHEPKLDVIFSLTLRGATEKLNKEESILLVRSVASCVRNEQDQMILADLESNFSASINGDVEGEGNTKMSKIDNEDLRRTTPDDIYEIWSEESAFERMLNVNHDVAWRLMDEMLMCTGYRRILIWFLTHLELKHSLIYYVFELIMGLRGKPFSGEASDQDKKDDMIYEILKKKQKNEDASGLPFSRQGPIVLSDIETKMLLQEFFMNAAIFLSSKNNEEENEDGEKISLYSLGLVRLICYMVQTLIANDKFFFTKSECTFELQTLLMTWIGILPEAKDLFFKIKTRLAMEEEDSADTMQHEGRKNSDIEKKLNAKPASELNLKLLNLFPSKPANKDDSSPINTLRSFIADYSFDTQVNPPGRRVVFYDGKILPLPKADKPIPLHEYITLAELDVGDSE
Protein: SAM50-like protein SPAC17C9.06 (Q10478)
Organism: Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Function: May be required for the assembly pathway of mitochondrial outer membrane proteins.
Subcellular location: Mitochondrion outer membrane {ECO:0000250|UniProtKB:P53969}; Multi-pass membrane protein {ECO:0000250}.
Interaction partners:
- Probable mitochondrial import receptor subunit tom40
- Mitochondrial distribution and morphology protein 10
- Metaxin-like protein C409.19c
- Mitochondrial import receptor subunit tom22
- Metaxin-1
- MICOS complex subunit mic60
- Mitochondrial import receptor subunit tom7
- Probable mitochondrial import receptor subunit tom70
- Mitochondrial import receptor subunit tom20
- Protein transport protein yip1
Sequence:
MTEQFESTSFPSDIPAVNEESKLSAEETFKSLSEILAENSTLPVGISSIRVTGAHHTRPSFIRKVLKTCLDTSKPAKSRSLLETLNAIQETTGNLMAFNVYETANIKIDRASSSVSGDDDLDVTIQVKEKPRLYVETGTDVGNVEGNVHANVLARNVFGGAELLSGNVSYGTRNRSTMSVNFETPVNADPKTRLRFNGHSNLRDNKSISSHDLLTKGITLSLQHQDLWSGEHLLSQNLLWRQVTHLTEYASPSVRLEAGDSLKQSLSYTYTRDTRDHLMIPTKGDYVRQTLELAGFGFLPGDASFLKSEFWGQKAVALNSSRSVSLSLSARIGALHSLNKKQVSLCDRFMLGGSTSLRGFSEDRIGPKDGRDSLGGTAYMAFSMSLLFPLPKVDASKPFRLQLFANAGGLSNLTSPNPCGTYKSILSKPCISTGLGLVYATPAARFELNFTLPIATTEKDIGRKGLQFGAGIDFM
Protein: RNA-binding protein, putative (Q57TU8)
Organism: Trypanosoma brucei brucei (strain 927/4 GUTat10.1)
Interaction partners:
Sequence:
MTDHQVICKDLPSLESNAVGIEDFCWYPSMNPSRSGERYMSPSTAGGSPSLPILTPSDLLMMRDSWDAPNQTDSPSTQCTRSHAATKPPFTTPETPIPTAVGVPKPATTVSNHAIAAGCVPLAGTATLSPCGSDVSLGHRMEFAVPVGGVPSVNPPSPFAHQCQVSELLSGPDSQNVFACLRWKDGPLDINDAAESEGADDDQSSHYLWSSGCVTYPTFGNGELMSSSVDESLTCPPKKQHHGGQPQHQDVQGTKDNNHQRVPDCSEDAIRSNLFISGLRHSVTDSGLHELFSPFGSIESAKVMLDIHTGRSRGIAFVKFVRLCDAQRAVEALNGSIFCGETITVRVAKPNAAYRPGAPTNKTFVRNVPLSAKKEDLVSHFSKYGQVVEVSIHGDTAQCSTNKKRNVVFITYTTKEAAAWAAQQTHTTMPFPDCEGIPLLAKVAEDSAHRIERLARRGSSGKQASNSSKAVSGDASPQTAHLPPTPPLAVSQQHPHQQSLLQFQQQQQQHDLQQQLFLQQQQQQQALQQQLFMQQQQQQQQAYTSGFISSKLPQAFGTCAGAPSLVMSPPGLYSSEPYTAPTPSFGVQQGLYATPLFPLPAGPTAGGQVVILGPNRQLQPAVMCPPTPQPQSTVMYYMPGAQVPMQVPITAERLQHVTPTPTMRVG
Protein: Protein PAT1 homolog 1 (PAT1-like protein 1) (Protein PAT1 homolog b) (Pat1b) (xPat1b) (Q32N92)
Organism: Xenopus laevis (African clawed frog)
Function: RNA-binding protein involved in deadenylation-dependent decapping of mRNAs, leading to the degradation of mRNAs. Acts as a scaffold protein that connects deadenylation and decapping machinery. Required for cytoplasmic mRNA processing body (P-body) assembly (By similarity). When tethered to a reporter mRNA, able to repress translation.
Subcellular location: Cytoplasm, P-body {ECO:0000269|PubMed:20826699}. Nucleus {ECO:0000250|UniProtKB:Q86TB9}. Nucleus, PML body {ECO:0000250|UniProtKB:Q86TB9}. Nucleus speckle {ECO:0000250|UniProtKB:Q86TB9}. Note=Predominantly cytoplasmic. Shuttles between the nucleus and the cytoplasm in a CRM1-dependent manner. Enriched in splicing speckles. Localization to nuclear foci and speckles requires active transcription. Excluded from the nucleolus. {ECO:0000250|UniProtKB:Q86TB9}.
Interaction partners:
Sequence:
MESLVDGDGFPDLEEDEDIDQFNDDTFGAGAVDDDWREEHERLAEMEEKLPATHILARVTSSPINDLLGDQQEELEQSLNQLVRENEEPALPQGSLTQFSAGMNSSIWDTSRTIRPIRGPLLMEDMTPLSILHEYGLATVAPPGRDDTERDASERALPRRSTSPVIGSPPVRAVPIGTPPKHGASPNFSHTQVLCPNPIHIRASSAFSGPHNNPASILRHPFPSALSPLQRAQLLGGAQTVAAQMSPSQFSRPGLHGPTLASVAPKLLQGHVGQMVAPVGGGFRPFFGVPSAPGAHIKNMSLRSQQQFRPDTTHLHPQHRRMLYQRQQNRNQHRGVNGSGGERTCRPAQMELNRRDPYAGLMLQREKEWVCRIQLLQLQSTDPYHDDYYYQNYFEKLDKLSVSQDRSREGPKKERTKLITPQVAKLEHTYKPVQFEGSLGKLTVSSVNNPRKMIDAVATSRSEEDETREKQVRDKKRQTLVIIEKMFSLLLDLEDFERRFSLCCEEAEHEVLTEEQKQKLQQLCDTLRGKEVGERVAEEQFVQIMCIRKGKRMISRILPLLPLQLAAAVLSIMAHNLLFLIKKDIQDQALPCLAATCSLVLCQLSLPALTSLLQNLCGATSQQQLSSILQNKFGLTLLYQILERGEDLLSSGDPMSQSQPTWTSLVVQAAHCLLQVSELSLPRPLCSPLTALAHFSRYLDTQNSSLLQSKLGSTNGTL
Protein: Nestin (Q6P5H2)
Organism: Mus musculus (Mouse)
Function: Required for brain and eye development. Promotes the disassembly of phosphorylated vimentin intermediate filaments (IF) during mitosis and may play a role in the trafficking and distribution of IF proteins and other cellular factors to daughter cells during progenitor cell division (By similarity). Required for survival, renewal and mitogen-stimulated proliferation of neural progenitor cells.
Interaction partners:
- Tubulin beta-3 chain
- Transcription factor SOX-2
- Neuronal migration protein doublecortin
- RNA binding protein fox-1 homolog 3
- Synemin
- Paired box protein Pax-6
- POU domain, class 5, transcription factor 1
- Oligodendrocyte transcription factor 2
- Cyclin-dependent kinase 5
- Prominin-1
Sequence:
MEGCVGEESFQMWELNRRLEAYLTRVKTLEEQNQLLSAELGGLRAQSGDASWRARADDELAALRVLVDQRWREKHEAEVQRDNLAEELESVAGRCQQVRLARERTIEEAACSRRALEAEKNARGWLSTQAAELERELEALRASHEEERAHLNAQAACTPRRPPAPAHASPIRAPEVEELARRLGEVWRGAVRDYQERVAHMESSLGQARERLGQAVRGARESRLEVQQLQADRDSLQERREALEQRLEGRWQDRLQATEKFQLAVEALEQEKQGLQSQIAQILEGGQQLAHLKMSLSLEVATYRTLLEAENSRLQTPGRSSQASLGFPDPKLKLHFLGIPEDQHLGSVLPVLSPTSFSSPLPNTLETPVTAFLKTQEFLKARTPTLASTPIPPMSEAPYPKNAEVRAQDVPHSLLQGGRQQAPEPLWAEATVPSSTGVLPELEEPGGEQPDHFPDDPTSLAPPLNPHHSILEAKDRESSESRVSSIFQEEEGQIWELVKKEAATEVKVENSLAQEIQESGLDTEEIQDSQGPLQMETLEALGDEPLMSLKTQNHETPGKENCNSSIEENSGTVKSPEKEKQTPLKSLEEKNVEAEKTLENGVLELSKPLGEEEPRMEDQELMSPEHTLETVSFLGKENQEVVRSSEEQNLESLITFKEESQYPLGGPEAEDQMLERLVEKEDQRFPRSPEEDQQAFRPLEKENQEPLRFEEAEDQVLERLIEKERQESLKSPEEEDQQAFRLLEKENQEPLRFEDAEDQVLERLIEKERQESLKSPEEEDQQAFRLLEKENQEPLRFEEAEDQVLERLVEKESQESLKSPEEEDQRTGKPLEKENQESLRSLDENQETIVLLESKNQRPLRSLEVEEEEQRIVKPLEKVSQVSLESLEKENVQSPRYLEEDDHMIKSLLEDKTHEILGSLEDRNGENFIPPENETQGSLRPPEEEDQRIVNHLEKESQEFLRSPEAEEEEEQVMVRSLEGENHDPLSSVVKEEQMAESKLENESQDSRKSLEDESQETFGSLEKENLESLRSLAGQDQEEQKLEQETQQPLRAVEDEQMTVNPPEKVDPELPKPLRNDQEVVRSLDKENQESLVSLNEGGMETVKSSETENIESLETVGECLGRRKSVDTQEPLWSTEVTSETIEPLEDETQEPLGCVDENQEVLTPLERESQELRSLGKWNPETVESPGGVEDSQQCLEVEEGPEREQHQESLRSLGEVEWELPGSGSQQRWEDVVEDGEGQEASLGATGVETEDKAELHLRGQGGEEKAVEEGELLQDAVGEAWSLGSSEPKEQRVPAEPLDDLEGQPEQTGTLEVPVAQGMPEATEQDEDRAQAGEQDSVEVTLGLEAARAGLELEQEVVGLEDPRHFAREEAIHPSLGEESVKAKIDQGLEEPGKEPKEAGALDSGIPELPKTSSETLECKGWEESGEGWGEEEASLETSDHEGSHAPQPRPPKTEEDEGLQAALTVPGPKLLEPCSPIPILTDAHELQPQAEGIQEAGWQPEAGTEALGRVEDEPEFGRGEIPEGLQDWEEGREDSEADELGETLPDSTPLGLYLKSPASPKWEQAGEQRLFPQGEARKEGWSPAALAAQGLSDPPEEEQQGHDSDLSSEEFEDLGTEASLLPGVPKEVSDHLGQEPPVLQPACWDQGGESDGFADEEESGEEGEEEDADEEEGAESGTQWWGPGPSGGGVKVQDVTQRGDLEHESVGDSGLWDDGLSGAAANVLVTALETVSQDSAEPSGSEGSESASLEGEEGQAIDHLDAPQEVTSVVPGAGDTFDISGQGPNLESEQVNGRMENGLEQAEGQVVLHGDEDQGIPLQEQGTLKAPLVGSPVHLGPSQPLKFTLSGVDGDSWSSGED
Protein: Col4a1 protein (Q5FWY9)
Organism: Rattus norvegicus (Rat)
Subcellular location: Secreted, extracellular space, extracellular matrix, basement membrane {ECO:0000256|ARBA:ARBA00004302}.
Interaction partners:
Sequence:
KGETGPFGPPGPRGFPGPPGPDGLPGSMGPPGTPSVDHGFLVTRHSQTTDDPLCPPGTKILYHGYSLLYVQGNERAHGQDLGTAGSCLRKFSTMPFLFCNINNVCNFASRNDYSYWLSTPEPMPMSMAPIFGDNIRPFISRCAVCEAPAMVMAVHSQTIQIPQCPNGWSSLWIGYSFVMHTSAGAEGSGQALASPGSCLEEFRSAPFIECHGRGTCNYYANAYSFWLATIERSEMFKKPTPSTLKAGELRTHVSRCQVCMRRT
Protein: Probable gliding protein (MglB) (Q5SJ83)
Organism: Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8)
Interaction partners:
Sequence:
MVEPSLVLYGAPYERAVEVLEETLRETGARYALLIDRKGFVLAHKEALWAPKPPPLDTLATLVAGNAAATQALAKLLGEARFQEEVHQGERMGLYVDEAGEHALLVLVFDETAPLGKVKLHGKRAAEALARIAEEALANPPRLALDTEYREGAEALLDDLLRN
Protein: Tetratricopeptide repeat protein 12 (TPR repeat protein 12) (Q9H892)
Organism: Homo sapiens (Human)
Function: Cytoplasmic protein that plays a role in the proper assembly of dynein arm complexes in motile cilia in both respiratory cells and sperm flagella.
Subcellular location: Cytoplasm {ECO:0000269|PubMed:31978331}.
Interaction partners:
- Ankyrin repeat and protein kinase domain-containing protein 1
Sequence:
MDADKEKDLQKFLKNVDEISNLIQEMNSDDPVVQQKAVLETEKRLLLMEEDQEEDECRTTLNKTMISPPQTAMKSAEEINSEAFLASVEKDAKERAKRRRENKVLADALKEKGNEAFAEGNYETAILRYSEGLEKLKDMKVLYTNRAQAYMKLEDYEKALVDCEWALKCDEKCTKAYFHMGKANLALKNYSVSRECYKKILEINPKLQTQVKGYLNQVDLQEKADLQEKEAHELLDSGKNTAVTTKNLLETLSKPDQIPLFYAGGIEILTEMINECTEQTLFRMHNGFSIISDNEVIRRCFSTAGNDAVEEMVCVSVLKLWQAVCSRNEENQRVLVIHHDRARLLAALLSSKVLAIRQQSFALLLHLAQTESGRSLIINHLDLTRLLEALVSFLDFSDKEANTAMGLFTDLALEERFQVWFQANLPGVLPALTGVLKTDPKVSSSSALCQCIAIMGNLSAEPTTRRHMAACEEFGDGCLSLLARCEEDVDLFREVIYTLLGLMMNLCLQAPFVSEVWAVEVSRRCLSLLNSQDGGILTRAAGVLSRTLSSSLKIVEEALRAGVVKKMMKFLKTGGETASRYAIKILAICTNSYHEAREEVIRLDKKLSVMMKLLSSEDEVLVGNAALCLGNCMEVPNVASSLLKTDLLQVLLKLAGSDTQKTAVQVNAGIALGKLCTAEPRFAAQLRKLHGLEILNSTMKYISDS
Protein: Dual specificity mitogen-activated protein kinase kinase dSOR1 (Downstream of RAF) (MAPKK) (EC 2.7.12.2) (Q24324)
Organism: Drosophila melanogaster (Fruit fly)
Function: Required downstream of Raf in the sevenless (sev), torso (tor), and Drosophila EGF receptor homolog (DER) signal transduction pathways. Involved in both positive regulation (at the posterior terminus) and negative regulation (at the anterior domain) of tll, as in other terminal class gene products, maybe via the ERK-A kinase.
Interaction partners:
- Raf homolog serine/threonine-protein kinase Raf
- AT08303p
- Mitogen-activated protein kinase ERK-A
- Myocardin-related transcription factor, isoform H
- Ras-like protein 1
- Mitogen-activated protein kinase kinase kinase 4
- Tyrosine-protein kinase Src42A
- Connector enhancer of KSR protein CNK
- Mitogen-activated protein kinase p38b
- Extracellular signal-regulated kinase 7
Sequence:
MSKNKLNLVLPPVNTEATVAAATVAPTPPFKTPSGTDTHSLLGKPKTSIDALTETLEGLDMGDTERKRIKMFLSQKEKIGELSDEDLEKLGELGSGNGGVVMKVRHTHTHLIMARKLIHLEVKPAIKKQILRELKVLHECNFPHIVGFYGAFYSDGEISICMEYMDGGSLDLILKRAGRIPESILGRITLAVLKGLSYLRDNHAIIHRDVKPSNILVNSSGEIKICDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSLGLSLVEMAIGMYPIPPPNTATLESIFADNAEESGQPTDEPRAMAIFELLDYIVNEPPPKLEHKIFSTEFKDFVDICLKKQPDERADLKTLLSHPWIRKAELEEVDISGWVCKTMDLPPSTPKRNTSPN