wanglab/gogpt-training-data huggingface dataset:
Protein: Probable lipase MIL1 (EC 3.1.1.-) (Medium adaptin-interacting ligand 1) (P43564)
Organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Function: Probable lipase that recruits the AP-1-related (AP-1R) complex to membranes via interaction with APM2. The AP-1R complex is an adapter protein complex that mediates of cargo protein SNC1 sorting in clathrin-coated vesicles.
Subcellular location: Golgi apparatus membrane {ECO:0000269|PubMed:26658609}; Multi-pass membrane protein {ECO:0000255}. Early endosome membrane {ECO:0000269|PubMed:26658609}; Multi-pass membrane protein {ECO:0000255}. Cytoplasmic vesicle, clathrin-coated vesicle membrane {ECO:0000269|PubMed:26658609}; Multi-pass membrane protein {ECO:0000255}.
Interaction partners:
- Uncharacterized acyltransferase YDR018C
Sequence:
MSDSEEDLGVQLKGLKIARHLKESGEHTDEESNSSPEHDCGLSNQDDLTVMHTQAKEEVFKRREEDGTRTEDALHEGEAGKEGTGFPSSQSVCSPNEADSGIDRADKPILLDPFKSVHDTDPVPGTKSRSNSDSDSDSDDGGWQEMPAVSSFNIYNHRGELELTSKVRNSEQASETSPTVPPGKNCKSVNDSRFDYTKMAAEQQAQRSYRTNKKTDFLFDHKVLKKKINSSQTSVNLTSSPSTTSLNNEKNNDDDDDDSYDEYEDDVEPVNDLNRDSQLNITKNLLSDMEKFAYVGAINILANQMCTNLATLCLCIDIKSHKKLAHRLQFTQKDMAAWKTVVLSRLYDHLGISQEEIVMIEKLSLHKIQLEDLCKCLKTTQSIDNPWENDRDHEEDGIEETTERMSPNEQNGSVQASTPDPEQSATPETPKAKQSPLSSDVPGKVLDPENVKSQDKLNIDVAWTIICDLFLICLQSSTYDSRSRTLLINFAKVLNMTSLEICEFERRVTDSLDMEQSTEDQVWDEQDHMRNRRRSKRRKKMAYVALAMVGGSLVLGLSGGLLAPVIGGGIAAGLSTIGITGATSFLTGVGGTTVVAVSSTAIGANIGARGMSKRMGSVRTFEFRPLHNNRRVNLILTVSGWMVGNEDDVRLPFSTVDPVEGDLYSLYWEPEMLKSIGQTVSIVATEIFTTSLQQILGATVLTALISSIQWPMALSKLGYILDNPWNVSLDRAWSAGKILADTLIARNLGARPITLVGFSIGARVIFSCLIELCKKKALGLIENVYLFGTPAVMKKEQLVMARSVVSGRFVNGYSDKDWFLAYLFRAAAGGFSAVMGISTIENVEGIENINCTEFVDGHLNYRKSMPKLLKRIGIAVLSEEFVEIEEMMNPEEVKRKRKLINDVDAAQKKLSERKKHNSWVPKWLKPKKSKWKVMVEEAVEEGRDMQDLPENDVNNNENENPDEHEGIARQKRRDAALVDHGALMHELQLIKQAMHEDEIKNKACLPGEDKEVESSNDFLGESHYKPPSTPKINPPQSPNNFQLLSAGRTILPEDDDFDPRGKKKVEFSFPDDI
Protein: D-Tyr-tRNA(Tyr) deacylase (Q581U3)
Organism: Trypanosoma brucei brucei (strain 927/4 GUTat10.1)
Subcellular location: Cytoplasm {ECO:0000256|ARBA:ARBA00004496}.
Interaction partners:
Sequence:
MTVRVALQSIEKASLLLDNEQRYGSVGRGALIYIAFIGAVSEDALKNAVDVILTANVFHNLSSSDALPRSSDSLSSFPSADVLIVPQASLGGKLKGRNVQFHALVGKSEGELLYNQFCQLMRKARGVDSTTVDSNGVPLVGSAVGSSARVINGTWGNRQGLRLESQGPLTHVLDL
Protein: 26S proteasome regulatory particle chain RPT6-like protein (AT5g53540/MNC6_8) (P-loop containing nucleoside triphosphate hydrolases superfamily protein) (Q9FJC9)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Subcellular location: Mitochondrion outer membrane {ECO:0000256|ARBA:ARBA00004572}; Single-pass membrane protein {ECO:0000256|ARBA:ARBA00004572}.
Interaction partners:
- F18B13.13 protein
- Metalloendoproteinase 2-MMP
Sequence:
MKRSSGRKDSNFIEQLILYVASAALSSLVLYVGLRQLDPNRDAAKKSLEHKREIAKRLGRPLIQTNQYEDVIACDVINPLHIDVEFGSIGGLESIKQALYELVILPLKRPELFAYGKLLGPQKGVLLYGPPGTGKTMLAKAIARESEAVFINVKVSNLMSKWFGDAQKLVSAVFSLAYKLQPAIIFIDEVDSFLGQRRSTDNEAMSNMKTEFMALWDGFTTDQNARVMVLAATNRPSELDEAILRRFPQSFEIGMPDCQERAQILKVVLKGESVESDINYDRIARLCEDYTGSDIFELCKKAAYFPIREILEAEKEGKRVSVPRPLTQLDLEKVLATSKKTQVAASEYTGLSSQSSVWGSPSNADEVQAAINGISKLFVSQLRNIQPDSQDSYQQHPSEGDSE
Protein: Transcription activator GCR1-like domain-containing protein (A0A1D8PCG5)
Organism: Candida albicans (strain SC5314 / ATCC MYA-2876) (Yeast)
Interaction partners:
- Mitogen-activated protein kinase HOG1
- Transcriptional regulator SKO1
- Transcriptional regulator MNL1
Sequence:
MNETYNSQEPNNAMFYNNNSTPSNDAQSQNNNNSTGNSSVVNAAASMHANNGNHNNDNINTNDSINENNNNNNGNNNSNSSGNTNNNNKNKGKNKNNSGNSNNHTVNELYGLIHNLQSQFAHYQNTQFNQLMMKISFLHDSMDHMKSQVNDLSQQVLFLAKNSGMISGTNSNPNSTFNNQFKAFEVFTKHLNELNKEIEEISSSSQGMQNQSQQQQQQQQQQQQQLHQPHHQAQIPPPPSHPPQQTLQLQSNHSQFQGPSVHLGVPSNSNGPPASQFDEEVDSITRKGLSLRSPANSSPNPTSHYVFDVGPFASRNMNGNNANNLYDKGPTTSVIRPNKKRRKQQKNSQEDTPANEPESTLQSQRRLPVQQQSRQTLAQSSSTYPNSYILPMPPLLSDDKLGQNSGSSTNNDPTQFMLQRDNGTVMTSALRQPPNHTRPPPNQQTASGFSFDDEIDSIDQLENDKQNEGSSSESAKRTSKKRKQSESGKMTISVNPLNIPQYKLERSLKSLAEIWKEYAHGLNNKPPLKSLETKYGTKWRNETESRTFLRRKKIYEAIEIGISKGYTEDEVIQELEMHRSYNKNGVIKRKPLSWLSSNMPEKFNSPT
Protein: Synaptogyrin-1 (p29) (Q62876)
Organism: Rattus norvegicus (Rat)
Function: May play a role in regulated exocytosis. Modulates the localization of synaptophysin/SYP into synaptic-like microvesicles and may therefore play a role in synaptic-like microvesicle formation and/or maturation. Involved in the regulation of short-term and long-term synaptic plasticity (By similarity).
Subcellular location: Cytoplasmic vesicle, secretory vesicle, synaptic vesicle membrane {ECO:0000269|PubMed:12928441, ECO:0000269|PubMed:8557746}; Multi-pass membrane protein {ECO:0000269|PubMed:8557746}. Melanosome {ECO:0000250|UniProtKB:O43759}.
Interaction partners:
- Synaptotagmin-1
- Neuronal acetylcholine receptor subunit beta-3
- Acetylcholine receptor subunit epsilon
- Ras-related protein Rab-3A
- Syntaxin-1A
Sequence:
MEGGAYGAGKAGGAFDPYTLVRQPHTILRVVSWVFSIVVFGSIVNEGYLNNPEEEEEFCIYNRNPNACSYGVTVGVLAFLTCLVYLALDVYFPQISSVKDRKKAVLSDIGVSAFWAFFWFVGFCFLANQWQVSKPKDNPLNEGTDAARAAIAFSFFSIFTWAGQAVLAFQRYQIGADSALFSQDYMDPSQDSSMPYAPYVEPSAGSDPTGMGGTYQHPANAFDAEPQGYQSQGY
Protein: Protein DETOXIFICATION 41 (AtDTX41) (Multidrug and toxic compound extrusion protein 41) (MATE protein 41) (Protein TANNIN-DEFICIENT SEED 3) (Protein TRANSPARENT TESTA 12) (Q9LYT3)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Acts as a flavonoid/H(+)-antiporter that control the vacuolar sequestration of flavonoids in the seed coat endothelium. Could transport the anthocyanin cyanidin-3-O-glucoside and epicatechin 3'-O-glucoside in vitro.
Subcellular location: Vacuole membrane {ECO:0000269|PubMed:17601828, ECO:0000269|PubMed:25891958}; Multi-pass membrane protein {ECO:0000269|PubMed:17601828, ECO:0000269|PubMed:25891958}. Note=Tonoplast.
Interaction partners:
- ATPase 10, plasma membrane-type
- Glutathione S-transferase F12
- Transcription factor TT2
- Transcription factor TT8
- Anthocyanidin reductase
- Protein TRANSPARENT TESTA 1
- Leucoanthocyanidin dioxygenase
- Dihydroflavonol 4-reductase
- Protein TRANSPARENT TESTA 16
- Protein TRANSPARENT TESTA GLABRA 1
Sequence:
MSSTETYEPLLTRLHSDSQITERSSPEIEEFLRRRGSTVTPRWWLKLAVWESKLLWTLSGASIVVSVLNYMLSFVTVMFTGHLGSLQLAGASIATVGIQGLAYGIMLGMASAVQTVCGQAYGARQYSSMGIICQRAMVLHLAAAVFLTFLYWYSGPILKTMGQSVAIAHEGQIFARGMIPQIYAFALACPMQRFLQAQNIVNPLAYMSLGVFLLHTLLTWLVTNVLDFGLLGAALILSFSWWLLVAVNGMYILMSPNCKETWTGFSTRAFRGIWPYFKLTVASAVMLCLEIWYNQGLVIISGLLSNPTISLDAISICMYYLNWDMQFMLGLSAAISVRVSNELGAGNPRVAMLSVVVVNITTVLISSVLCVIVLVFRVGLSKAFTSDAEVIAAVSDLFPLLAVSIFLNGIQPILSGVAIGSGWQAVVAYVNLVTYYVIGLPIGCVLGFKTSLGVAGIWWGMIAGVILQTLTLIVLTLKTNWTSEVENAAQRVKTSATENQEMANAGV
Protein: Uncharacterized protein YKR041W (P36134)
Organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Interaction partners:
- Histone chaperone ASF1
Sequence:
MSDDDYMNSDDDNDAEKRYVRPIFVRKRRREEDYVATSKDNIHHHPCDWSAKPSQRQNENEQKSTIRLVPVAMNTPKCQEKKKKRKGVGTTSHEATLFEYGESIAGYKCVTTESERDRLKRSHESESSSESEVDVFAFDQAKGISSKVEAEERYARAVRQYWRMTKDEPATLPLPGTPTLAAVSLDMIDDKSVEQFYTMSSALMDANRLDLIRRDRIRWHPDKHRYHKSKVTKLFQAINGLWEQEKTEKR
Protein: Mitochondrial ribosome-associated GTPase 2 (GTP-binding protein 5) (Protein obg homolog 1) (ObgH1) (Q9H4K7)
Organism: Homo sapiens (Human)
Function: Plays a role in the regulation of the mitochondrial ribosome assembly and of translational activity. Displays GTPase activity. Involved in the ribosome maturation process.
Subcellular location: Mitochondrion. Mitochondrion inner membrane; Peripheral membrane protein; Matrix side.
Interaction partners:
- Mitochondrial assembly of ribosomal large subunit protein 1
- Mitochondrial ribosome-associated GTPase 1
- rRNA methyltransferase 2, mitochondrial
- Transcription termination factor 4, mitochondrial
- 5-cytosine rRNA methyltransferase NSUN4
- Large ribosomal subunit protein bL20m
- Large ribosomal subunit protein bL27m
- Large ribosomal subunit protein bL21m
- Large ribosomal subunit protein bL17m
- Large ribosomal subunit protein bL32m
Sequence:
MAPARCFSARLRTVFQGVGHWALSTWAGLKPSRLLPQRASPRLLSVGRADLAKHQELPGKKLLSEKKLKRYFVDYRRVLVCGGNGGAGASCFHSEPRKEFGGPDGGDGGNGGHVILRVDQQVKSLSSVLSRYQGFSGEDGGSKNCFGRSGAVLYIRVPVGTLVKEGGRVVADLSCVGDEYIAALGGAGGKGNRFFLANNNRAPVTCTPGQPGQQRVLHLELKTVAHAGMVGFPNAGKSSLLRAISNARPAVASYPFTTLKPHVGIVHYEGHLQIAVADIPGIIRGAHQNRGLGSAFLRHIERCRFLLFVVDLSQPEPWTQVDDLKYELEMYEKGLSARPHAIVANKIDLPEAQANLSQLRDHLGQEVIVLSALTGENLEQLLLHLKVLYDAYAEAELGQGRQPLRW
Protein: Fork head protein homolog 1 (P40466)
Organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Function: Transcription factor that regulates the expression of the CLB2 cluster of genes during the G2/M phase of the mitotic cell cycle. The CLB2 cluster of genes includes mitotic regulators such as CLB1, CLB2, CDC5 and CDC20 as well as SWI5 and ACE2, transcription factors required for the subsequent temporal wave of cell cycle regulated gene expression in the M/G1 phase interval. Involved in HMRa silencing. FKH1 and FKH2 associate with the coding regions of active genes and influence, in opposing ways, transcriptional elongation and termination, and coordinate early transcription elongation and pre-mRNA processing. Both FKH1 and FKH2 play a role as regulators of lifespan in collaboration with the anaphase-promoting complex (APC), likely through combined regulation of stress response, genomic stability, and cell cycle regulation. FKH1 and FKH2 function also in controlling yeast cell morphology by preventing preudohyphal growth. Acts as a rate-limiting replication origin activator via its interactin with the origin recognition complex (ORC). Plays a transcription-independent role in recombination donor preference during mating-type switching through binding to the recombination enhancer (RE), a 700-bp cis-acting element that controls recombination along the left arm of chromosome III.
Subcellular location: Nucleus {ECO:0000269|PubMed:22932476}. Cytoplasm, cytosol {ECO:0000269|PubMed:12702877}. Note=Relocalizes to the cytosol in response to hypoxia. {ECO:0000269|PubMed:12702877}.
Interaction partners:
- Nuclear division defective protein 1
- Degradation in the endoplasmic reticulum protein 1
- ERAD-associated E3 ubiquitin-protein ligase component HRD3
- Pheromone receptor transcription factor
- G2/mitotic-specific cyclin-2
- Transcriptional factor SWI5
- Fork head protein homolog 2
- Metallothionein expression activator
- Regulatory protein SWI4
- Regulatory protein SWI6
Sequence:
MSVTSREQKFSGKYSSYTAQDRQGLVNAVTCVLSSSSDPVAVSSDYSNSLSIAREVNAYAKIAGCDWTYYVQKLEVTIGRNTDSLNLNAVPGTVVKKNIDIDLGPAKIVSRKHAAIRFNLESGSWELQIFGRNGAKVNFRRIPTGPDSPPTVLQSGCIIDIGGVQMIFILPEQETIISDYCLNHLMPKLLSTYGTNGNNNPLLRNIIEGSTYLREQRLQEEARLQQLDHLHTPLSSSSDVNPIGDPHGDTIMMEEDEEDENYTRGGIRPNTYTSSSNNAVTNGNVPHIENPSDLSLDENRYIKPPQSYASMITQAILSTPEGSISLADIYKFISDNYAFYRFSQMAWQNSVRHNLSLNKAFEKVPKRAGQQGKGMNWKISDEVRRDFLNKWNAGKLSKIRRGASVTRQLQLHMSKFGEIPAPESSSIDPRGIKAQKVKKSLQATSSILGESAPQLQRTQLTGQISTTTSMDVTTNANVNNSSLS
Protein: 1-cys-glutaredoxin-like protein-1 (EC 1.11.1.15) (O97232)
Organism: Plasmodium falciparum (isolate 3D7)
Interaction partners:
- BolA-like protein, putative
- Anamorsin homolog
- Cysteine desulfuration protein SufE
Sequence:
MIMKNKYGVFFSLSKNAIINSNRQLFPFKKVSKINFSNSADDKNNGVIPEQRTQYSGTNEYKDFEKTEVYQTLKIKIKELLEQEKIVLFMKGTPEKPLCGFSANVVNILNSMNVKDYVYIDVMKNNNLREAIKIYSNWPYIPNLYVNNNFIGGYDIISDLYNRGELEKIIK
Protein: pH-sensitive chloride channel 2 (Ligand-gated chloride channel protein hodor) (Q9V9Y4)
Organism: Drosophila melanogaster (Fruit fly)
Function: Ligand and pH-gated channel that mediates chloride transport primarily in the mid-gut and thereby functions in larval metabolism and fluid homeostasis. Channel opening is triggered by zinc binding or, to a lesser extent, an increase in extracellular pH. Zinc-dependent activity in the mid-gut is required for modulating Tor-dependent metabolic programs that promote larval feeding and systematic growth. It may therefore act as an intestinal zinc sensor that mediates larval growth and metabolism in response to micronutrient availability. Activates Tor signaling via its activity in maintaining lysosome homeostasis in interstitial cells and/or by its role in activating the release of insulin-like peptides in the brain after feeding, via an unknown mechanism. Functions in lysosome homeostasis by regulating chloride transport into enterocyte lysosomes to sustain V-ATPase function which maintains lysosomal acidification and consequently promotes Tor activation at the lysosome membrane. Also appears to play a role in regulating fluid secretion and osmotic homeostasis in Malpighian tubules in response to the pH of extracellular urine. This function is important for proper urine production during diuresis.
Subcellular location: Apical cell membrane {ECO:0000269|PubMed:27358471, ECO:0000269|PubMed:32269334}; Multi-pass membrane protein {ECO:0000255}. Cell projection, microvillus membrane {ECO:0000269|PubMed:32269334}; Multi-pass membrane protein {ECO:0000255}. Late endosome membrane {ECO:0000269|PubMed:32269334}; Multi-pass membrane protein {ECO:0000255}. Lysosome membrane {ECO:0000269|PubMed:32269334}; Multi-pass membrane protein {ECO:0000255}. Note=Enriched on the apical side of gut interstitial cells; on the brush-border and on the lysosomes. {ECO:0000269|PubMed:32269334}.
Interaction partners:
- RH55021p
Sequence:
MDTLGIFVLISYLGLSSAAGVHLGDLQQNLAANGSVVVSPLNTTDAFSVSINLSQSTVNNCPSLKNAESMALMELLTRLTAPCRYDRMVPPVVHNKDGEEVPMDIYARFYIYVMKNLDSSDLQFTVQGLLQLRYLDPRLAFSSYLPNRRQPIMGESELKKMLWVPHIFLTNEQASTVLGTSAKDELTSIYPNGTVLTSTRLQATLYCWMNFQKFPFDEQKCKTTLESWMYNTTLVQLHWETDNPVSFDKQLQLTEYNLIGSLYNESIRVSNESYMSHGSLEGNYSIISFTVLLTREVGYYVIDYFLPSIMIVTISWVSFWLQADQTPARTTLGCTTLLSFITLSLSQENNLMKVSYVTMSEVWFLVCTIFIFGSLVEFAFVNTIWRRNNDLQLKKRTTKYIVKSTFVPHLKKHRRHGYRRTDSTMSTMSTTSMDKTCGPNNTVITIETPIIIGGSLSREDSAISLDEQDETSTSESSDSSKEKPAQTFATMTPKEVSLWIDRKMRFVFPLSFIVFNALFWTLVYCL
Protein: Sialic acid transporter NanX (P39352)
Organism: Escherichia coli (strain K12)
Subcellular location: Cell inner membrane {ECO:0000305|PubMed:32542330}; Multi-pass membrane protein {ECO:0000255}.
Interaction partners:
- 2,7-anhydro-N-acetylneuraminate hydratase
- N-acetylneuraminate epimerase
- N-acetylneuraminic acid outer membrane channel protein NanC
- N-acetylneuraminate anomerase NanQ
- Inner membrane metabolite transport protein YdjE
Sequence:
MATAWYKQVNPPQRKALFSAWLGYVFDGFDFMMIFYILHIIKADLGITDIQATLIGTVAFIARPIGGGFFGAMADKYGRKPMMMWAIFIYSVGTGLSGIATNLYMLAVCRFIVGLGMSGEYACASTYAVESWPKNLQSKASAFLVSGFSVGNIIAAQIIPQFAEVYGWRNSFFIGLLPVLLVLWIRKSAPESQEWIEDKYKDKSTFLSVFRKPHLSISMIVFLVCFCLFGANWPINGLLPSYLADNGVNTVVISTLMTIAGLGTLTGTIFFGFVGDKIGVKKAFVVGLITSFIFLCPLFFISVKNSSLIGLCLFGLMFTNLGIAGLVPKFIYDYFPTKLRGLGTGLIYNLGATGGMAAPVLATYISGYYGLGVSLFIVTVAFSALLILLVGFDIPGKIYKLSVAK
Protein: Upstream stimulatory factor 2 (Major late transcription factor 2) (Upstream transcription factor 2) (Q63665)
Organism: Rattus norvegicus (Rat)
Function: Transcription factor that binds to a symmetrical DNA sequence (E-boxes) (5'-CACGTG-3') that is found in a variety of viral and cellular promoters.
Subcellular location: Nucleus.
Interaction partners:
- Upstream transcription factor 1, isoform CRA_a.
Sequence:
MDMLDPGLDPASSATAAAAASHDKGPEAEEGVELQEGGDGPGAEEQTAVAIASVQQAAFGDHNIQYQFRTESNGGQVTYRVVQVTDGQLDGQGDAAGAVSVVSTAAFAGGQQAVTQVGVDGAAQRPGPAAASVPTGPAAPFPLAVIQNPFSNGGSPAAEAVSGEARFAYFPASSVGDTTAVSVQTTDQSLQAGGQFYVMMTPQDVLQTGTQRTIAPRTHPYSPKIDGTRTPRDERRRAQHNEVERRRRDKINNWIVQLSKIIPDCHADNSKTGASKGGILSKACDYIRELRQTNQRMQETFKEAERLQMDNELLRQQIEELKNENALLRAQLQQHNLEMVGESTRQ
Protein: Protein gooseberry-neuro (BSH4) (Protein gooseberry proximal) (P09083)
Organism: Drosophila melanogaster (Fruit fly)
Function: Expressed in a segmentally repeating pattern to define the polarity of embryonic segments.
Subcellular location: Nucleus.
Interaction partners:
- Mitochondrial import inner membrane translocase subunit Tim22
Sequence:
MDMSSANSLRPLFAGYPFQGQGRVNQLGGVFINGRPLPNHIRLKIVEMAASGVRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPKVTSPEIETRIDELRKENPSIFSWEIREKLIKEGFADPPSTSSISRLLRGSDRGSEDGRKDYTINGILGGRDSDISDTESEPGIPLKRKQRRSRTTFTAEQLEALERAFSRTQYPDVYTREELAQTTALTEARIQVWFSNRRARLRKHSGGSNSGLSPMNSGSSNVGVGVGLSGATAPLGYGPLGVGSMAGYSPAPGTTATGAGMNDGVHHAAHAPSSHHSAATAAAAAHHHTQMGGYDLVQSAAQHGFPGGFAQPGHFGSQNYYHQDYSKLTIDDFSKLTADSVSKISPSLHLSDNYSKLEAPSNWSQAAYHAAANYNAHVAQHQLNDYAAAAAHGNPASAYSHPLPTQGQAKYWS
Protein: M6, isoform E (M9PFW7)
Organism: Drosophila melanogaster (Fruit fly)
Interaction partners:
Sequence:
MFCSNAERGPLSWCHWHPAFGIWSKACGPKPRWQSTLELHSVWHRHRGTSGECCQSCMARIPYATLIATLMCLLGVGIFCFTMYRGASLTVIMVDQVFHLRLIWIEAVQMIFVIIGAGMAALGFMILFVGFLATGATRYKVYRAWRSRVGGRISCAVLMGITYLLNFVWSLILCFLVVVTFIYTMFWNMCTSVEHSQSCIDLTQFHFMFPPNTKLEDMKVCEKYEIKAFCKDGVENAEVMFILATLSTLLVLLSLVHYLMCLSANYAHIRDHEKFQELQEIQNLNELEYSATSKDRF
Protein: Neuronal pentraxin 2a (Neuronal pentraxin-2a isoform X2) (D2D0C1)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Interaction partners:
- FERM and PDZ domain-containing 3
Sequence:
MRALFVALLLVYASGSGKVAGANGAKGNRFVCTAVPAGTDLSCPVETTNRVQSTSPQEEELRNTIIQLRETILQQKETIVSQQGTIKELNSKLARCEADVRSRGSARRKDYSKNTMGDLPRDPTESVEQLGKTMQSLKDRLESLEQLRTNTSNGAFPSELRDLLKRRLSDLEGQLLTRVAELEEEKSQLYNETAAHRQRTENTLNSLLERITELEKSNSAFKSPEDFKVALPLRTNYLYGRIKKSLPEMYAFTVCMWLKSSASPGIGTPFSYGVPGQANEIVLIEWGNSPMELLVNDKVAQLPLSVSDGRWHHICITWTTRDGFWEAYQDGERLGTGENLAPWHPIKPGGVIILGQEQDIVGGRFDATQAFVGELSHFNMWDRVLRPIDISAMANCSAYMPGNVVPWVDANVEVFGGATKAALEICEERLFDS
Protein: Oxalate oxidoreductase subunit delta (OOR delta subunit) (EC 1.2.7.10) (Q2RI40)
Organism: Moorella thermoacetica (strain ATCC 39073 / JCM 9320)
Function: Catalyzes the anaerobic oxidation of oxalate using a broad range of electron acceptors, including ferredoxin and the nickel-dependent carbon monoxide dehydrogenase. Does not require coenzyme A as cosubstrate. Enables anaerobic growth on oxalate which is used as energy source by the bacteria.
Interaction partners:
- Oxalate oxidoreductase subunit beta
- Pyruvate:ferredoxin oxidoreductase
- Oxalate oxidoreductase subunit alpha
- Pyruvate ferredoxin oxidoreductase, beta subunit
- Ketoisovalerate ferredoxin oxidoreductase, beta subunit
- NADH dehydrogenase
- NAD
- FAD dependent oxidoreductase
- CO-methylating acetyl-CoA synthase
- Pyruvate kinase
Sequence:
MSTKDLFAEPNLKQITVWARGVVMNKDARDIVVALTEAAAKEGKYVQAWENYVDLPDRIYVPVRAYARISSDPIESKYIYENETPDIVVLVEESLIKGVPILKGIRPGSTLVVNTKRSIDTILEFLGDTGNLAQIVTVDANSMAEAVMTLSGAEGATDATGIGAGIAAPIAGAVVKATGIVDVENLAAVVKNPAAMRRGYAEAQVRQLPPHEAVEEAAVSATELLRQMPFAGTVPSPVTENEGMVTGNWRIQRPIIDREACTECYTCWIYCPDSCITRTEEGPVFNMKYCKGCGLCTAVCPSGALTNVPELDFKD
Protein: High mobility group B protein 5 (High mobility group protein D) (AtHMGdelta) (HMG delta) (Nucleosome/chromatin assembly factor group D 05) (Nucleosome/chromatin assembly factor group D 5) (O49597)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Binds preferentially double-stranded DNA. Confers resistance to salt and drought stresses.
Subcellular location: Nucleus {ECO:0000255|PROSITE-ProRule:PRU00267, ECO:0000269|PubMed:17114349}. Note=Displays a highly dynamic speckle distribution pattern in interphase chromatin.
Interaction partners:
- High mobility group B protein 12
- FACT complex subunit SSRP1
- At2g29670/T27A16.23
- 28 kDa heat/acid-stable phosphoprotein-like protein
- At1g15970
- DNA glycosylase superfamily protein
- DNA glycosylase superfamily protein
- At1g19480
- Oxysterol-binding protein-related protein 2A
- Endonuclease III homolog 2, chloroplastic
Sequence:
MKDNQTEVESRSTDDRLKVRGNKVGKKTKDPNRPKKPPSPFFVFLDDFRKEFNLANPDNKSVGNVGRAAGKKWKTMTEEERAPFVAKSQSKKTEYAVTMQQYNMELANGNKTTGDDEKQEKAADD
Protein: Trinucleotide repeat-containing gene 6C protein (Q3UHC0)
Organism: Mus musculus (Mouse)
Function: Plays a role in RNA-mediated gene silencing by micro-RNAs (miRNAs). Required for miRNA-dependent translational repression of complementary mRNAs by argonaute family proteins As scaffoldng protein associates with argonaute proteins bound to partially complementary mRNAs and simultaneously can recruit CCR4-NOT and PAN deadenylase complexes (By similarity).
Interaction partners:
- Protein argonaute-2
- Protein argonaute-1
- Protein argonaute-4
- Protein argonaute-3
- GRB10-interacting GYF protein 1
- CCR4-NOT transcription complex subunit 1
- Polyadenylate-binding protein 1
- GRB10-interacting GYF protein 2
- PAN2-PAN3 deadenylation complex subunit Pan3
- PAN2-PAN3 deadenylation complex catalytic subunit Pan2
Sequence:
MATGSAQSSFPSHLKKTNGSHGTNGALVQSPSNQSALGAGGTNGNGGVARVWGVATSSSSGLAHCSVGGGDGKMDNMIGDGRSQNCWGASNSNAGINLNLNPNANPAAWPVLGHEGTVATGNPSSICSPVSAIGQNMGSQNGNPVGALGAWGNLLPQESAEPQTSTSQNVSFSVQPQNLNTDGPNNTNPMNSSPNPINAMQTNGLPNWGMAVGMGAIIPPHLQGLPGANGSSVSQGSGSGGEGMGSSVWGLSPGNPATGSTNCGFSQGNGDTVNSALSAKQNGSSSAVQKEGNGGNAWDSGPPAGPGILAWGRGSGTNGIGNIHSGAWGHPSRSSSNGVNGEWGKPPNQHSSSDISGKGSTGWDSASAASQTPALQPGSEHMNSWAKATSSGTTASEGSSDGSGNHNEGSTGREGTGEGRRRDKGVLDQGHIQLPRNDLDPRVLSNSGWGQTPVKQNTAWEFEESPRSERKNDNGTEAWGSIATQPSNSGGKTDGSIMNSTNTSSVSGWVSSPPAAVPANTSWGDSNNKAPSGPGVWGDSISSTAVNNAAATKSGHAWSGTVNQEDKSPTWGEPQKPKSQNWGDGQRANPAWSTGAGDWADSSSVLGHLGDGKKNGSGWDADGNRSGSGWNDATRCGTSGWGSGTNAKVNPGTNWGESLKPGPQQNWAHKPQDNNVSNWGGAASVKQTGTGWIGGPLPVKQKDSSEATGWEEPSPPSIRRKMEIDDGTSAWGDPSTYNNKTVNMWDRNNPVIQSSTTAPATPTTPTSSSTTHRAETPPSHQAGTQLNRSPLLGPVSSGWGEMPSVHSKAENSWGEPSSPCTLVDNGTAAWGKPPSSGSGWDHPAEPVVPFGRASAPAAAPALCKPASKSMQEGWGSGADEMNLGTSQWEDEDGDMWNNAASQESSSSCSSWGNTSKKGLQKGMKTPGKQDEAWIMSRLIKQLTDMGFPREPAEEALKSNSMNLDQAMSALLEKKVDMDKRGLGMTDYNGMVTKPLGCRPPISKESSMDRPTFLDKLTLSFSNQDGGLVEEPTTSPFLPSPSLKLPLSNSALPSQALGGVASGLGMQNLNSSRQIPSGNLGVFGNSGAAQARTMQQPPVQPLNSSQPSLRAQVPQFLSPQVQAQLLQFAAKNIGLSPALLTSPINPQHMTMLNQLYQLQLAYQRLQIQQQMLQAQRNVSGPMRQQEQQVARTITNLQQQIQQHQRQLAQALLVKQPPPPPPPPHLSLHPSAGKSGMESFPPPPQAPGLPDLQTKEQQSSPNTFAPYPLAGLNPNMNVNSIDMSSGLSVKDPSQSQSRLPQWTHPNSMGNLSSAASPLDQNPSKHGAIPGGLSIGPPGKSSIDDSYGRYDLIQNSESPASPPVAVPHSWSRAKSDSDKISNGSSISWPPEFHPGVPWKGLQNIDPENDPDVTPGSVPTGPTINTTIQDVNRYLLKSGGKLSDIKSTWSSGPASHTQASLSHELWKVPRNTTAPTRPPPGLANPKPSSTWGTSPLGWTSSYSSGSAWSTDTSGRTSSWLVLRNLTPQIDGSTLRTLCLQHGPLITFHLNLTQGNAVVRYSSKEEAAKAQKSLHMCVLGNTTILAEFAGEEEVNRFLAQGQALPPTSSWQSSSGGSQPRLGTSGSTHGLVRSDTAHWNTPCLSGKGSSELLWGGVPQYSSSLWGPPSAEDARVIGSPTPLNTLLPGDLLSGESI
Protein: Response regulator 7 (Q9FRY8)
Organism: Zea mays (Maize)
Interaction partners:
Sequence:
MGQGGEVKAAPAVRVLVVDDSPVDRKVVELLLRNHNHQGGAAPFHVTAVDSGKKAMEHLRLMEQGGQLDSCAADANRITIDIVLTDYCMPEMTGYDLLKAIKALSSPNPIPVVVMSSENEPQRISRCLTAGAEDFILKPLKTKDVQRLRNCSSAARPRDDAAHQCESLRSSSRKLRSDQVAAPAHRSQPTTGLTMVLHASSIELSHYFQFLLKFVLLAYAVLCLTELLHRWSNGSVLSLWSA
Protein: 4930503B20Rik protein (RIKEN cDNA 4930503B20 gene) (Q80ZP0)
Organism: Mus musculus (Mouse)
Interaction partners:
Sequence:
MVNYYKVLGVPRNASSSDIKRAFHQLALQVHPDKNPGDKEAAEEKFKQVAEAYHILSDAKKRKDYDRSRWNRNKGEIRGDGHDKGETIRVNDSRDETDWEEKICSRRPRHTFQKVTEDEDLFSGDCLFSGPITGSRRASSPFFTVTPIMDTGFSTFVSHESRSYSDDPETFVPYISQGMGKFRLVTTCSKTVNGKRVVTKRVVENIRGPKKIENERLFRHNPSRGWKLMENPCS
Protein: Testis-specific Y-encoded protein 1 (rTSPY) (Q9R1M3)
Organism: Rattus norvegicus (Rat)
Function: May be involved in sperm differentiation and proliferation.
Subcellular location: Cytoplasm {ECO:0000250|UniProtKB:Q01534}. Nucleus {ECO:0000250|UniProtKB:Q01534}. Note=Predominantly cytoplasmic. Also found in nucleus. {ECO:0000250|UniProtKB:Q01534}.
Interaction partners:
- RBMY
- Zinc finger protein 1, Y-linked
- ubiquitinyl hydrolase 1
- Eukaryotic translation initiation factor 2 subunit 3, Y-linked
- Eukaryotic translation initiation factor 4C
Sequence:
MENSEEESVGVAPQEFRELVLLESSLLEGEPSVQAPEQSPGAPAGDNQMVKPLVICGPVEDWVPLAEVLHHPDTCEEGDEATMAELKVTEVVDVKNEGEEVKDQKQEGEQDQQPELEKNPEQACDSKDQQGIQRLPLSGGGPAERRSKMEELELLQLELSFVNARCSGAFARIKAKVAKMRRPHFDRRKTIIQGIPGFWAKAMMNHPQMSSIISNQDEDLLSYMLSLEVEEYNPGLRMCRMMFFFSENPYFRNDIVTKDYQLSIIGYKESDSSTIEWIGQAEHGYANCMQDTTRLTFFNWLCAHKFPGSNRIAEIIMDDLWPNPLYYYPKEDHS