wanglab/gogpt-training-data huggingface dataset:
Protein: Pair-rule protein odd-paired (P39768)
Organism: Drosophila melanogaster (Fruit fly)
Function: Transcription factor essential for parasegmental subdivision of the embryo. It is involved in the activation of wingless (wg) in odd parasegments. It is also required for the timely activation of wg in the remaining parasegments and for the timely activation of engrailed (en) in all parasegments.
Subcellular location: Nucleus {ECO:0000305}.
Interaction partners:
Sequence:
MMMNAFIEPAQHHLASYGLRMSPNTTASNSNAQQQQQQQLEMTQQQQQQQQQQQQQQQQDQESAAATAAAYQNSGYGHFNSYASRDFLLGRREAEYGVAGSAGQASAAADSMLFSGFPAQAAELGSGFGQHPFHSHHHHHQMRMGMADAYAAGHPYNHHGNFPTAAVHHPVVHHPSHHAMSAMHPAGAGAFLRYMRHQPASSASSVKQEMQCLWIDPDQPGLVPPGGRKTCNKVFHSMHEIVTHLTVEHVGGPECTTHACFWVGCSRNGRPFKAKYKLVNHIRVHTGEKPFACPHPGCGKVFARSENLKIHKRTHTGEKPFKCEHEGCDRRFANSSDRKKHSHVHTSDKPYNCRINGCDKSYTHPSSLRKHMKVHGNVDEKSPSHGYDSEGEESSSSSIITGGAQTPPSTRLDGSAGSSSGVSSLSGGSGIKSSPHSIKSEPNPMHSVHLGASSSGSSSTASSSASHLLQHQQHQHQQQQQQQQHQQQAQQQQQLTAHPSDPKSSPALQLMAASASAYLPPPLGPPPSHHHHPHHHQAAPSPGAAAASASMLHHNHHLLYHPAAQHHPPSDWYHTTAPSGSAEAMNPLNHFGHHHHHHHLMHPGAATAY
Protein: Filamin-binding LIM protein 1 (FBLP-1) (Migfilin) (Mitogen-inducible 2-interacting protein) (MIG2-interacting protein) (Q8WUP2)
Organism: Homo sapiens (Human)
Function: Serves as an anchoring site for cell-ECM adhesion proteins and filamin-containing actin filaments. Is implicated in cell shape modulation (spreading) and motility. May participate in the regulation of filamin-mediated cross-linking and stabilization of actin filaments. May also regulate the assembly of filamin-containing signaling complexes that control actin assembly. Promotes dissociation of FLNA from ITGB3 and ITGB7. Promotes activation of integrins and regulates integrin-mediated cell-cell adhesion.
Subcellular location: Cell junction, focal adhesion {ECO:0000269|PubMed:12679033, ECO:0000269|PubMed:18829455}. Cytoplasm, cytoskeleton, stress fiber {ECO:0000269|PubMed:12496242, ECO:0000269|PubMed:12679033, ECO:0000269|PubMed:18829455}. Note=Associated with actin stress fiber at cell-ECM focal adhesion sites (PubMed:12679033, PubMed:18829455). Isoform 1 and isoform 3 are recruited and localized at actin stress fibers and clustered at cell-EMC adhesion sites through interaction with FERMT2 (PubMed:12679033). Isoform 2 is localized at actin stress fibers (PubMed:12496242). {ECO:0000269|PubMed:12496242, ECO:0000269|PubMed:12679033, ECO:0000269|PubMed:18829455}.
Interaction partners:
- Filamin-A
- Filamin-C
- Fermitin family homolog 2
- Filamin-B
- Vasodilator-stimulated phosphoprotein
- Fermitin family homolog 3
- Fermitin family homolog 1
- Protein CutA
- Scaffold protein ILK
Sequence:
MASKPEKRVASSVFITLAPPRRDVAVAEEVRQAVCEARRGRPWEAPAPMKTPEAGLAGRPSPWTTPGRAAATVPAAPMQLFNGGCPPPPPVLDGEDVLPDLDLLPPPPPPPPVLLPSEEEAPAPMGASLIADLEQLHLSPPPPPPQAPAEGPSVQPGPLRPMEEELPPPPAEPVEKGASTDICAFCHKTVSPRELAVEAMKRQYHAQCFTCRTCRRQLAGQSFYQKDGRPLCEPCYQDTLERCGKCGEVVRDHIIRALGQAFHPSCFTCVTCARCIGDESFALGSQNEVYCLDDFYRKFAPVCSICENPIIPRDGKDAFKIECMGRNFHENCYRCEDCRILLSVEPTDQGCYPLNNHLFCKPCHVKRSAAGCC
Protein: Histone H2A (Q6PV61)
Organism: Penaeus vannamei (Whiteleg shrimp) (Litopenaeus vannamei)
Function: Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
Subcellular location: Nucleus {ECO:0000305}. Chromosome.
Interaction partners:
Sequence:
MSGRGKGGKVKGKSKSRSSRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIVPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEKK
Protein: Gene 24 protein (ORF24) (Q98140)
Organism: Human herpesvirus 8 (HHV-8) (Kaposi's sarcoma-associated herpesvirus)
Interaction partners:
Sequence:
MAALEGPLLLPPSASLTTSPQTTCYQATWESQLEIFCCLATNSHLQAELTLEGLDKMMQPEPTFFACRAIRRLLLGERLHPFIHQEGTLLGKVGRRYSGEGLIIDGGGVFTRGQIDTDNYLPAVGSWELTDDCDKPCEFRELRSLYLPALLTCTICYKAMFRIVCRYLEFWEFEQCFHAFLAVLPHSLQPTIYQNYFALLESLKHLSFSIMPPASPDAQLHFLKFNISSFMATWGWHGELVSLRRAIAHNVERLPTVLKNLSKQSKHQDVKVNGRDLVGFQLALNQLVSRLHVKIQRKDPGPKPYRVVVSTPDCTYYLVYPGTPAIYRLVMCMAVADCIGHSCSGLHPCANFLGTHETPRLLAATLSRIRYAPKDRRAAMKGNLQACFQRYAATDARTLGSSTVSDMLEPTKHVSLENFKITIFNTNMVINTKISCHVPNTLQKTILNIPRLTNNFVIRKYSVKEPSFTISVFFSDNMCQGTAININISGDMLHFLFAMGTLKCFLPIRHIFPVSIANWNSTLDLHGLENQYMVRMGRKNVFWTTNFPSVVSSKDGLNVSWFKAATATISKVYGQPLVEQIRHELAPILTDQHARIDGNKNRIFSLLEHRNRSQIQTLHKRFLECLVECCSFLRLDVACIRRAAARGLFDFSKKIISHTKSKHECAVLGYKKCNLIPKIYARNKKTRLDELGRNANFISFVATTGHRFAALKPQIVRHAIRKLGLHWRHRTAASNEQTPPADPRVRCVRPLV
Protein: Serum/glucocorticoid regulated kinase 1 (E9PR89)
Organism: Homo sapiens (Human)
Interaction partners:
Sequence:
MTVKTEAAKGTLTYSRMRGMVAILIAFMKQRRMGLNDFIQKIANNSYACKHPEVQSILKISQPQEPELMNANPSPPPSPSQQINLGPSSNPHAKPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLKPNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKSHVFFSLINWDDLINKKITPPFNPNVSGPNDLRHFDPEFTEEPVPNSIGKSPDSVLVTASVKEAAEAFLGFSYAPPTDSFL
Protein: R-spondin-2 (Cysteine-rich and single thrombospondin domain-containing protein 2) (Cristin-2) (mCristin-2) (Roof plate-specific spondin-2) (Q8BFU0)
Organism: Mus musculus (Mouse)
Function: Activator of the canonical Wnt signaling pathway by acting as a ligand for LGR4-6 receptors. Upon binding to LGR4-6 (LGR4, LGR5 or LGR6), LGR4-6 associate with phosphorylated LRP6 and frizzled receptors that are activated by extracellular Wnt receptors, triggering the canonical Wnt signaling pathway to increase expression of target genes. Also regulates the canonical Wnt/beta-catenin-dependent pathway and non-canonical Wnt signaling by acting as an inhibitor of ZNRF3, an important regulator of the Wnt signaling pathway. Probably also acts as a ligand for frizzled and LRP receptors. During embryonic development, plays a crucial role in limb specification, amplifying the Wnt signaling pathway independently of LGR4-6 receptors, possibly by acting as a direct antagonistic ligand to RNF43 and ZNRF3, hence governing the number of limbs an embryo should form (By similarity).
Subcellular location: Secreted {ECO:0000269|PubMed:16543246}.
Interaction partners:
- E3 ubiquitin-protein ligase ZNRF3
- Leucine-rich repeat-containing G-protein coupled receptor 5
- Leucine-rich repeat-containing G-protein coupled receptor 4
- E3 ubiquitin-protein ligase RNF43
- Leucine-rich repeat-containing G-protein coupled receptor 6
Sequence:
MRFCLFSFALIILNCMDYSQCQGNRWRRNKRASYVSNPICKGCLSCSKDNGCSRCQQKLFFFLRREGMRQYGECLHSCPSGYYGHRAPDMNRCARCRIENCDSCFSKDFCTKCKVGFYLHRGRCFDECPDGFAPLDETMECVEGCEVGHWSEWGTCSRNNRTCGFKWGLETRTRQIVKKPAKDTIPCPTIAESRRCKMAMRHCPGGKRTPKAKEKRNKKKRRKLIERAQEQHSVFLATDRVNQ
Protein: Peroxin-7 (Q57W97)
Organism: Trypanosoma brucei brucei (strain 927/4 GUTat10.1)
Subcellular location: Cytoplasm, cytosol {ECO:0000256|ARBA:ARBA00004514}. Peroxisome matrix {ECO:0000256|ARBA:ARBA00004253}.
Interaction partners:
- Peroxisome targeting signal 1 receptor
- Peroxisomal membrane protein PEX14
- Peroxin-13
- RING-type E3 ubiquitin transferase
- Peroxisome assembly protein, putative
- Alkylglycerone-phosphate synthase
- Phytanoyl-CoA dioxygenase
- Peroxisomal ATPase PEX6
- Peroxisomal ATPase PEX1
Sequence:
MPSFVLHPGFAGHSLRCNPWQPTQFLVTASEHFGVAGSGKVYVVNTSQGLQPHSPVQLVGCWGTSDAAFDACFSEVDRDLVAVACGDGVKLYSLQQSFNRDGVMPVAHSTEHRAEVVGVAWCRDAFLSCSWDGAVKLWKAATPQVSFMTFHEHLKEVYEVSCSTFNPASFLSCSGDGTWRLWDSRSPRSVLTQIGHGHQPILSIDFNKQDNSIFATGGVDRTVHLWDVRRPQRPLTVLPGHDNACRRVRFSPHSRTLLASSGYDCRVCLWDLNQPQRPLTARYAHHREFVVGLQWSLATPNALASVSWDGSAFFWTNGQPLTPSPSSQPLPPAIPPPRVRPPRPKGVPDISALPLTVPPVR
Protein: POU domain, class 3, transcription factor 2 (POU domain protein 47) (ZP-47) (P79746)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Function: Transcription factor that may play important roles in patterning the embryonic brain.
Subcellular location: Nucleus {ECO:0000255|PROSITE-ProRule:PRU00108, ECO:0000255|PROSITE-ProRule:PRU00530}.
Interaction partners:
Sequence:
MATTASNHYNILTSSPSIVHSEPGSMQQATAYRDAQTLLQSDYSLQSNSHPLSHAHQWITALSHGEGGPWSSSPLGEQDIKPAVQSPRDEMHNSSNLQHQSRPPHLVHQTHGNHHDSRAWRTTTAAHIPSMATSNGQSLIYSQPSFSVNGLIPGSGQGIHHHSMRDAHEDHHSPHLSDHGHPPSQHQHQSHQSHHDHSDEDTPTSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEADSTSGSPTSLDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPAASEITSLADSLQLEKEVVRVWFCNRRQKEKRMTPPGGPLPGTEDVYGDTPPHHGVQTPVQ
Protein: Glycogen synthase kinase-3 beta (GSK-3 beta) (EC 2.7.11.26) (Xgsk-3 protein) (Q91757)
Organism: Xenopus laevis (African clawed frog)
Function: Plays a role in the organization of the formation of the main body axis of developing embryo. Acts as an inhibitor of differentiation of primary neurons. Inhibits the ability of ectopically expressed NEUROD1 and other bHLH factors to promote early retinal cell differentiation. May participate in the Wnt signaling pathway. May regulate the circadian clock via phosphorylation of the major clock components.
Subcellular location: Cytoplasm {ECO:0000250|UniProtKB:P49841}. Nucleus {ECO:0000250|UniProtKB:P49841}. Cell membrane {ECO:0000250|UniProtKB:P49841}.
Interaction partners:
Sequence:
MSGRPRTTSFAESCKPVQQPSSFGSMKVSRDKDGSKVTTVVATPGQGPDRQQEVTYTDTKVIGNGSFGVVYQAKLCDTGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQALPIIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPETAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRARTPPEAIALCSRLLEYTPTSRLTPLDACAHSFFDELRDPNLKLPNGREFPALFNFTTQELSSNPSLSSILIPAHARNQAAVSTTSNTTSTSDSNTGERGSTNNAASASASNSS
Protein: NAP1-binding protein (P52919)
Organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Interaction partners:
- Spindle pole component BBP1
- Monopolar spindle protein 2
- Spindle pole body component SPC42
- Spindle pole body assembly component MPS3
- Protein SFI1
- Cell division control protein 31
- Spindle pole component 29
- Spindle pole body component 110
- Cell division control protein KAR1
- Gamma tubulin complex adapter SPC72
Sequence:
MLKSVQGLWKDFFGIRDDGRKREYGSLDEVRKRSALRSRRKQMRPTGKSVLKRPRKVTDRKTEEKIRTNRRKTPKRRLTKIFQTIRDVFSNDNENMSKMQNVCGDMTRILKKRSQGRPSYMDTDTAKSRILRSDAFKRKISELKYNKQRISELRSGSSDGSSGKDRNQSLYLDREILLQRQIKKRDEKIKALESKLQSLQEALNYSNEKYRILEDLLDSSNIHPSYTKSRRTMSNLARENDEIKPLKIDLSPSPIRRTNSLFTSSPMKTYNRDGNIPEMQPLQENISPACPTPPYRSRETEKEDETLSPISVDFSSYLS
Protein: Large ribosomal subunit protein uL13x (60S ribosomal protein L13a-3) (Q9SVR0)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Interaction partners:
- Large ribosomal subunit protein eL42z/eL42y
- Large ribosomal subunit protein eL38z/eL38y
- Large ribosomal subunit protein uL18y
- Small ribosomal subunit protein eS30z/eS30y/eS30x
- At5g09770
- Small ribosomal subunit protein uS14z/uS14y/uS14x
- Large ribosomal subunit protein uL29y
- Large ribosomal subunit protein uL5y/uL5x/uL5w
- Large ribosomal subunit protein uL23y
- Large ribosomal subunit protein uL23z
Sequence:
MVSGSGICAKRVVVDGRHHMLGRLASNTAKELLNGQEVVVVRCEEICLSGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVFEGIPPPYDKIKRMVIPDALKVLRLQSGHKYCLLGRLSSEVGWNHYDTIKELETKRKERSQVMYERKKQLNKLRTKAEKVAEERLGSQLDVLAPVKY
Protein: Drep2 (Q9U787)
Organism: Drosophila melanogaster (Fruit fly)
Interaction partners:
Sequence:
MAREESRGKRPLKIWDSWRNVRKGVVVGTFEELLVRGKDKLGVPASEPVRVVLECDGTQIEDGEYFRTLANNTVLLLLRQGERWYPTGVDVIKAAISAIPKIVCETIHALELHDETPSWKIMDNKGRVTVVLHWDQRQGGGSGGGESGGAGGGVGSMCSRLGSSNGLLSSDKYSPSKKGLSAQSSLDNKSVSSQSSQPRYASPQITVISDDGPASIYHPGGVVLPPGVVIPGGSRRLSKQGSSFDSTVGVGVGAVHVHTPECAHHAHTPSRAGSPSTTECDFHCCALHEEGRKIAVHKSVATSPIQDGSSSPQPQSAPSVMDPMLGGSGGGGSGSMQRRSSGAKGHVRFLDIAPERDSSESETENTVMEDDKTTTEKFLLLIDQLSVDQKRHLSIKDIGIILERLNSKILDVERLDRESESDDCYNWTIKATIRGDALRELGVIYNANYYAISEHPGYKEELEENGEEVEEEEEEDEEDRI
Protein: Antitoxin VapB22 (P71622)
Organism: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Function: Antitoxin component of a type II toxin-antitoxin (TA) system. Upon expression in M.smegmatis neutralizes the effect of cognate toxin VapC22.
Interaction partners:
- Ribonuclease VapC22
- Probable enoyl-CoA hydratase EchA16
- DUF2277 domain-containing protein
- DUF1802 family protein
Sequence:
MTATEVKAKILSLLDEVAQGEEIEITKHGRTVARLVAATGPHALKGRFSGVAMAAADDDELFTTGVSWNVS
Protein: Phenylacetaldehyde dehydrogenase (PAD) (EC 1.2.1.39) (O06837)
Organism: Pseudomonas fluorescens
Function: Phenylacetaldehyde dehydrogenase that catalyzes the last step in the aerobic styrene degradation pathway by mediating oxidation of phenylacetaldehyde to phenylacetic acid.
Interaction partners:
Sequence:
MTRSLTMNSSLPAIDGLRLPHQMLIGGQWVNAQSDKTLNVYNPATGDTLTDVPDGDVEDVNAAVESAAATLQSDAWRRMPPSARERILLRLADLLEAHGDELARLETLNNGKLLIYSKMMEVGASAQWLRYMAGWATKLTGSTLDLSLPLPPDVRSRASTQRVPVGVVAAIIPWNFPLLMAVWKIAPALACGNTVVLKPAEETPLTALRLAELAMEAGLPAGALNVVTGRGETAGDALVRHPKVAKVAFTGSTEVGRIIGSACGRSLKAVSLELGGKSPVIVLADCDPQEAAEGAAAAIFFNHGQVCTAGSRLYVHESIYEDVIQRLAVIGESIVVGSGLEQGVHMGPMVSKKHHENVLRHIRNGIEDGADLICGGTEAPCAQGFFVKPTIFANREKKDIRLLSQEVFGPVLVATPFSDIAEVVNEANRSVYGLGASIWTNDLSAALRINDELEAGTVWVNTHNMVDPNLPFGGFKDSGVGREHGAAAIEHYTTTRSLVIAY
Protein: FI03450p (Serpentine, isoform B) (Serpentine, isoform C (EC 3.5.1.41)) (Q9VW34)
Organism: Drosophila melanogaster (Fruit fly)
Interaction partners:
- LD43683p
- Gasp, isoform A
- Vermiform, isoform I
- Chitin deacetylase-like 4
- Uninflatable, isoform C
- Knickkopf
- chitin synthase
- HL04814p
- LD12305p
- RH04334p
Sequence:
MAKLFVVFAVLALAAFNEASASDPLLRYKRQATTEETKKEESFEKELCKDKDAGEWFRLVAGEGDNCRDVIQCTSSGLQAIRCPAGLYFDIEKQTCDWKESVKNCKSKNKERRVKPLLHTDEPLCQDGFLACGDGNCIERGLFCNGEKDCSDGSDENTCDIDNDPNRAPPCDPAVCVLPDCFCSEDGTSIPGDLPAKDVPMMITITFDDAINNNNIELYKEIFKDRKNPNGCSIKATYFVSHKYTNYSAVQETARKGHEIAVHSITHNDEERFWSNATVDDWAKEMAGMRIITEKFANITDNSVVGVRAPYLRVGGNNQFTMMEEQAFLYDSTITAPLSNPPLWPYTMYFRMPHRCHGNLQSCPTRSHAVWEMVMNELDRREDPVNDEYLPGCAMVDSCSNILTGDQFYNFLNHNFDRHYDQNRAPLGLYFHAAWLKNNPEFLDAFLYWIDEILANHNDVYFVTMTQVIQWMQNPRTISEVKNFEPWREKCVVEGKPACWVPNTCKLTSKEVPGETINLQTCVRCPNNYPWVSDPTGDGFF
Protein: Mucin-13 (MUC-13) (Down-regulated in colon cancer 1) (Q9H3R2)
Organism: Homo sapiens (Human)
Function: Epithelial and hemopoietic transmembrane mucin that may play a role in cell signaling.
Subcellular location: Cell membrane {ECO:0000269|PubMed:11278439}; Single-pass type I membrane protein {ECO:0000269|PubMed:11278439}. Apical cell membrane {ECO:0000269|PubMed:11278439}. Secreted {ECO:0000269|PubMed:11278439}. Note=Also exists as a soluble form.
Interaction partners:
- Mucin-12
- Mucin-17
- Mucin-4
- Mucin-2
- Mucin-20
- Mucin-5AC
- Mucin-1
- Mucin-7
- Mucin-15
- Mucin-5B
Sequence:
MKAIIHLTLLALLSVNTATNQGNSADAVTTTETATSGPTVAAADTTETNFPETASTTANTPSFPTATSPAPPIISTHSSSTIPTPAPPIISTHSSSTIPIPTAADSESTTNVNSLATSDIITASSPNDGLITMVPSETQSNNEMSPTTEDNQSSGPPTGTALLETSTLNSTGPSNPCQDDPCADNSLCVKLHNTSFCLCLEGYYYNSSTCKKGKVFPGKISVTVSETFDPEEKHSMAYQDLHSEITSLFKDVFGTSVYGQTVILTVSTSLSPRSEMRADDKFVNVTIVTILAETTSDNEKTVTEKINKAIRSSSSNFLNYDLTLRCDYYGCNQTADDCLNGLACDCKSDLQRPNPQSPFCVASSLKCPDACNAQHKQCLIKKSGGAPECACVPGYQEDANGNCQKCAFGYSGLDCKDKFQLILTIVGTIAGIVILSMIIALIVTARSNNKTKHIEEENLIDEDFQNLKLRSTGFTNLGAEGSVFPKVRITASRDSQMQNPYSRHSSMPRPDY
Protein: Chlorophyll a-b binding protein, chloroplastic (Q9LMQ2)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Subcellular location: Plastid, chloroplast thylakoid membrane {ECO:0000256|ARBA:ARBA00004334, ECO:0000256|RuleBase:RU363080}.
Interaction partners:
- Photosystem II CP43 reaction center protein
- Chlorophyll a-b binding protein CP26, chloroplastic
- Photosystem II reaction center protein H
- Chlorophyll a-b binding protein 3, chloroplastic
- Oxygen-evolving enhancer protein 1-1, chloroplastic
- Expressed protein
- 29 kDa ribonucleoprotein, chloroplastic
- Chlorophyll a-b binding protein CP29.1, chloroplastic
- Chlorophyll a-b binding protein 2, chloroplastic
- Photosystem II reaction center W protein, chloroplastic
Sequence:
MAMAVSGAVLSGLGSSFLTGGKRGATALASGVGTGAQRVGRKTLIVAAAAAQPKKSWIPAVKGGGNFLDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQAWSGVAWFEAGAQPDAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPDSQSVEWATPWSKTAENFANYTGDQGYPGGRFFDPLGLAGKNRDGVYEPDFEKLERLKLAEIKHSRLAMVAMLIFYFEAGQGKTPLGALGL
Protein: T-complex protein 1 subunit beta (CCT-beta) (V9HW96)
Organism: Homo sapiens (Human)
Subcellular location: Cytoplasm {ECO:0000256|ARBA:ARBA00004496}.
Interaction partners:
Sequence:
MASLSLAPVNIFKAGADEERAETARLTSFIGAIAIGDLVKSTLGPKGMDKILLSSGRDASLMVTNDGATILKNIGVDNPAAKVLVDMSRVQDDEVGDGTTSVTVLAAELLREAESLIAKKIHPQTIIAGWREATKAAREALLSSAVDHGSDEVKFRQDLMNIAGTTLSSKLLTHHKDHFTKLAVEAVLRLKGSGNLEAIHIIKKLGGSLADSYLDEGFLLDKKIGVNQPKRIENAKILIANTGMDTDKIKIFGSRVRVDSTAKVAEIEHAEKEKMKEKVERILKHGINCFINRQLIYNYPEQLFGAAGVMAIEHADFAGVERLALVTGGEIASTFDHPELVKLGSCKLIEEVMIGEDKLIHFSGVALGEACTIVLRGATQQILDEAERSLHDALCVLAQTVKDSRTVYGGGCSEMLMAHAVTQLANRTPGKEAVAMESYAKALRMLPTIIADNAGYDSADLVAQLRAAHSEGNTTAGLDMREGTIGDMAILGITESFQVKRQVLLSAAEAAEVILRVDNIIKAAPRKRVPDHHPC
Protein: Translation initiation factor IF-1, chloroplastic (Q6END9)
Organism: Oryza nivara (Indian wild rice) (Oryza sativa f. spontanea)
Function: One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.
Subcellular location: Plastid, chloroplast {ECO:0000255|HAMAP-Rule:MF_00075}.
Interaction partners:
- Large ribosomal subunit protein uL2 C-terminal domain-containing protein
- Large ribosomal subunit protein uL4 C-terminal domain-containing protein
- Small ribosomal subunit protein eS31 domain-containing protein
- 60S acidic ribosomal protein P1
- 60S ribosomal protein L35a
- 40S ribosomal protein S16
- 60S ribosomal protein L17
- Ribosomal protein L22
- Ribosomal protein L30 ferredoxin-like fold domain-containing protein
- Ribosomal protein L30 ferredoxin-like fold domain-containing protein
Sequence:
MTEKKNRREKKNPREAKITFEGLVMEALPNGMFRVRLENDTIILGYISGKIRSSSIRILMGDRVKIEVSRYDSSKGRIIYRLPHKDSKRTEDSKDTEDLKDTKDSKG
Protein: Late cornified envelope protein 3D (Late envelope protein 16) (Small proline-rich-like epidermal differentiation complex protein 6A) (Small proline-rich-like epidermal differentiation complex protein 6B) (Q9BYE3)
Organism: Homo sapiens (Human)
Function: Precursors of the cornified envelope of the stratum corneum.
Interaction partners:
- Late cornified envelope protein 3E
- Small proline-rich protein 2G
- Small proline-rich protein 2A
- Late cornified envelope protein 2C
- Late cornified envelope protein 2B
- Late cornified envelope protein 3A
- Late cornified envelope protein 2D
- Small proline-rich protein 2D
- Cornifin-A
- Small proline-rich protein 2E
Sequence:
MSCQQNQQQCQPPPKCPSPKCPPKSPVQCLPPASSGCAPSSGGCGPSSEGGCFLNHHRRHHRCRRQRPNSCDRGSGQQGGGSGCGHGSGGCC
Protein: Cyclin-J18 (Q9C5X2)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Interaction partners:
- Cyclin-U4-2
- Probable microtubule-binding protein TANGLED
- Glucan endo-1,3-beta-glucosidase 3
- Cyclin-U2-2
- Cyclin-D3-2
Sequence:
MSTEIGHLRRRLVEFLIQSTTLLELPPIVKYSALSLFFDRFRPNLVRFLQKKKAEHWLLQPLNESNLQLFVLISIWISCKMHCTRGLSVHSLKSFGDKVITEQLFMVRDFLDAELVFLKVLKFEIGTLNIAYTRLEDLLIQFKEVAKVGEQLNFEACMDMMDLLYEKEDTSLLYQSSKSLAASILVSSYIITVPKQQYEFPILPWVKMVTNKEEREVVELVEYILAHVLYSNSP
Protein: Protein 4.2 (P4.2) (Erythrocyte membrane protein band 4.2) (Erythrocyte protein 4.2) (P49222)
Organism: Mus musculus (Mouse)
Function: Probably plays an important role in the regulation of erythrocyte shape and mechanical properties.
Subcellular location: Cell membrane; Lipid-anchor; Cytoplasmic side. Cytoplasm, cytoskeleton. Note=Cytoplasmic surface of erythrocyte membranes.
Interaction partners:
- Band 3 anion transport protein
- Ammonium transporter Rh type A
- Ankyrin-1
- Glycophorin-A
- Spectrin alpha chain, erythrocytic 1
- 5-aminolevulinate synthase, erythroid-specific, mitochondrial
- Blood group Rh
- Ferrochelatase, mitochondrial
- Dematin
- Tropomodulin-1
Sequence:
MGQALSIKSCDFHAAENNEEHYTKAISSQHLTLRRGQSFTITLNFRAPTHTFLSALKKVALIAQTGEQPSKINKTQAIFPISSLGDQKGWSAAVEERDAQHWTVSVTTPVDAVIGHYSLLLQVSGKKQYPLGQFTLLFNPWNRDDAVFLQNEAERTEYVLNQNGFIYLGTADCIQEEPWDFGQFEKDVMDLSLKLLSMDKQVKDWNQPAHVARVVGALLHALKKKSVLPISQTQAAQEGALLYKRRGSVPILRQWLTGQGRAVYETQAWVSAAVACTVLRCLGIPARVVTTFDSAQGTVGSLLVDEYYNEEGLQNGEGQRGHIWVFQTSVECWMNRPDLSQGYGGWQILHPRAPNGAGVLGSCSLVPVRAVKEGELQLDPAVPELFAAVNASCVVWKCCEDGKLELTNSNRKDVGNCISTKVVGSDRCEDITQNYKYPAGSLQEKEVLEKVQKERLKLGKDNGMCPPSCEPWDPLHMFFEASSSIPLSGDGQLSVTLINPTDEEKKVHLVIGAQALYYNGVLAAGLWSKKQLFMLKPNQVMRLSTNLSFSCFEQTPPENSFLRVTAMARYSHTSLSCFAQENMAIGKPDLIIEMPKRAAQYRPLTVSVRMHNSLEAPMQNCIISIFGRGLIHREKRYGLGSLWPGSSLHTQFQFTPTHLGLQRLTVEVDCDMFQNLTGYRSVLVVAPEVSV
Protein: Ciliary neurotrophic factor receptor (Cntfr) (A4JYQ0)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Interaction partners:
- Cardiotrophin-like cytokine factor 1
- LIF receptor subunit alpha b
- IL-6 subfamily cytokine M17.
- Prolactin receptor
- Gp130 protein
Sequence:
MANIVTSFCCVVLAAVVVVYAQRRSQQGGRIQYEKISSDVTMQCGSLDNDASVTWKVNGTDVKARRREEGPRLILMEVNMSSNGLYSCFQNPDGQRRDQINLRVGFPPKEPQVTCRSNTYPRGFYCSWHLQHPTFIPTDFEVDVQHNQRPLEVTRDTVHKNRCHVKFPELFSSSPYYVNVTAVNSLGRASTTISFEESSIVKPDPPEKVVAKPVANNARRLEVTWNSPSTWPDVETFPLKYFLRYRPLIRDQWQHVELSDSTSHTITDAYAGKEYIIQLAAKDMEIGTWSDWSVAVHATPWMEEPKPITSTTESDVIPETTPGPPSAAPRVGEPTAACSTLLWSTHLLLACVLLSIM
Protein: Possible fatty-acid-CoA ligase FadD1 (Fatty-acid-CoA synthetase) (Fatty-acid-CoA synthase) (P72007)
Organism: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Interaction partners:
- Possible integral membrane protein
- Polyketide synthase Pks13
- Medium/long-chain-fatty-acid--CoA/3-oxocholest-4-en-26-oate--CoA ligase
- Probable fatty-acid-CoA ligase FadD18
- Mycocerosic acid synthase-like polyketide synthase
- Phenolphthiocerol/phthiocerol polyketide synthase subunit C
- Mycoketide-CoA synthase
- Probable multifunctional mycocerosic acid synthase membrane-associated Mas
- Phthioceranic/hydroxyphthioceranic acid synthase
Sequence:
MTDTIQSLLRQHVSDPTIAVKYGGLQWTWSQYLAESAARAAALITIADPQRPTHIGSLLGNTPEMLAQLAAAGLGGYVLCGLNTTRRGDALAADVRRADCQIVVTDADHRALLDGLDLAGARILDTSTPRWAELVAGDGAFVPYREVDTMDPFMMIFTSGTSGNPKAVPVSHLMATFAGRSLTERFGLTEQDTCYVSMPLFHSNAVVAGWAPAVVSGAAIAPATFSATGFLDDVRRYHATYMNYVGKPLAYILATPERDDDADNPLRVAFGNEANDKDIEEFSRRFGVQVEDGFGSTENAVIVIREPGTPPGSIGRGAHGVAVYNGETVTECAVARFDAHGALTNADEAIGELVNTTGSGFFTGYYNDPEANAERMRHGMYWSGDLAYRDSEGWIYLAGRTADWMRVDGENLTAAPIERILLRYKAINRVAVYAVPDEYVGDQVMAALVLRAGDTFDPDAFEAFLDAQPDLSTKARPRYIRIAADLPSTATHKVLKRQLIDEGTAVGKADTLWVREPRGSAYHHASGPAKAI
Protein: Chalcone--flavanone isomerase (Chalcone isomerase) (EC 5.5.1.6) (A2IBF8)
Organism: Gossypium hirsutum (Upland cotton) (Gossypium mexicanum)
Function: Catalyzes the intramolecular cyclization of bicyclic chalcones into tricyclic (S)-flavanones. Responsible for the isomerization of 4,2',4',6'-tetrahydroxychalcone (also termed chalcone) into naringenin (By similarity).
Interaction partners:
Sequence:
MSTSLSVTELQVENFTFPPTVKPPGSTKTLFLGGAGERGLEIQGKFIKFTAIGVYLEDSAVNCLGVKWKGKSAVELTESVEFFRDVVTGDFEKFIRVTMILPLTGQQYSEKVSENCVAIWKSLGIYTDAEAKAIEKFIEVFKDENFPPGSSILFTISGQGSLTIGFSKDSSVPEGGKVVIENKLLANSVLESVIGKNGVSPAAKESLASRLSPLFNDCGADSEKPQS
Protein: Zinc finger with KRAB and SCAN domains 4 isoform 3 (A0A0S2Z6X0)
Organism: Homo sapiens (Human)
Subcellular location: Nucleus {ECO:0000256|PROSITE-ProRule:PRU00187}.
Interaction partners:
Sequence:
MAREPRKNAALDAQSAEDQTGLLTVKVEKEEASALTAEVRAPCSPARGPERSRQRFRGFRYPEAAGPREALSRLRELCGQWLQPEMHSKEQILELLVLEQFLTILPGNLQSWVREQHPESGEEVVVLLEYLERQLDEPAPQVERTGSRW