wanglab/gogpt-training-data huggingface dataset:
Protein: Hd1 (Q9FRZ7)
Organism: Oryza sativa subsp. indica (Rice)
Interaction partners:
Sequence:
MNYNFGGNVFDQEVGVGGEGGGGGEGSGCPWARPCDGCRAAPSVVYCRADAAYLCASCDARVHAANRVASRHERVRVCEACEQAPAALACRADAAALCVACDVQVHSANPLARRHQRVPVAPLPAITIPATSVLAEAVVATATVLGGKDEEVDSWIILSKDSNNNNNNNNSNSSNNGMYFGEVDEYFDLVGYNSYYDNRIENNQDQQYGMHEQQEQQQQQQEMQKEFAEKEGSECVVPSQITMLSEQQHSGYGVVGADQAASMTAGVSAYTDSISNSISLINGGGYSTRQHGDRYAKFQHPDTCWSNQSLLRSLASDVPSLQLHGQGGQGAQVQGEEEGQEV
Protein: Uncharacterized protein (Q38DW5)
Organism: Trypanosoma brucei brucei (strain 927/4 GUTat10.1)
Interaction partners:
Sequence:
MHTLLVTTNIFALCILSVFCSVVLFVLWTSATSRTVNSLPQELLLGLGNVDDILTAITLKDSLRNMNMANIICFALLILLVILLSLVEGVLIRMKSDLEECAKLPPVTLVQHMNNSYRAGLENSGLAYREDAKG
Protein: Ras-related protein RABF1 (AtRABF1) (Ras-related protein Ara-6) (Ras-related protein Rab5C) (AtRab5C) (Q9CB01)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Endosomal protein probably involved in endocytosis. Probably not involved in vacuolar trafficking.
Subcellular location: Early endosome membrane {ECO:0000269|PubMed:11532937}. Endosome membrane {ECO:0000269|PubMed:23482856}. Cell membrane {ECO:0000269|PubMed:11532937}; Lipid-anchor {ECO:0000269|PubMed:11532937}. Endoplasmic reticulum {ECO:0000269|PubMed:11532937}.
Interaction partners:
- Guanosine nucleotide diphosphate dissociation inhibitor At5g09550
- Guanosine nucleotide diphosphate dissociation inhibitor 2
- Guanosine nucleotide diphosphate dissociation inhibitor 1
- Vacuolar protein sorting-associated protein 9A
- Protein SUPPRESSOR OF K
- Vacuolar protein sorting-associated protein 45 homolog
- Vesicle-associated membrane protein 727
- Rab escort protein 1
- Protein VACUOLELESS1
- V-type proton ATPase subunit a1
Sequence:
MGCASSLPDRNSGTLSGLSNSENAVPADAKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDATSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYSALAPLYYRGAGVAVIVYDITSPESFKKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPTEDGMELAEKNGMFFIETSAKTADNINQLFEEIGKRLPRPAPSS
Protein: Protein kinase superfamily protein (Q7FK55)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Interaction partners:
Sequence:
MTSNFQRALGEGGFGIVYHGYLNGSEEVAVKVELLLRVHHTNLVSLVGYCDERGHLALIYEYMSNVDLKHHLSGKHDVSILKWSTRLRIAIDAALGLEYLHIGCRPSMVHRDVKSTNILLDDQFTAKIADFGLSRSFQLGDESHISTVVAGTPGYLDPETGRLAEMSDVYSFGIVLLEMMTNQRVIDQNREKRHITEWVALVLNRGDITKIMDPNLYGDYNSNSVWKALELAMSCANPSSEKRPSMSQVISVLKECLTSENLMRNKNHDMESDSSLELTKSFDTEVVPRAR
Protein: THO complex subunit 2 (Q9VQ76)
Organism: Drosophila melanogaster (Fruit fly)
Subcellular location: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
Interaction partners:
Sequence:
MQRSTDRLRRLKKLKSVTGAQDGVGGGDAAATADNRTSASSDTNGAAASSGAGGNQPGTLNPEVFKHLDKSGRSEFLKYLKHQLQDAADTPVYDKNGVFKQGISNAIYQLLWQTLRFTHKKDIVLHLLLEVVALHADFPSLIVDVVNILDSETSLITDGLQEERHAFVQLVKDLDRVIPESLLKERLEIDTLQEAGIVKNKSFYSKFIKVKTKLYYKQRRFNLFREESEGFAKLITELNQEFDENTTPESIMDIIKSLIGCFNLDPNRVLDIIIESFETRPDRWNLFIPLLRSYMPTGAIICEVLGYKFCHFKDSRTPRSLYHVCALLLKHGVIALNDVYVWLTPNDGSIKADWEEDLADAREMVRKLNLIQTNKKEDEKDPPPPPSVKKFNEEKYNANQKFGLCEALLKVGDWENAYKIIQKLPEQAVVLQEPIARAIADLIHLSVENIYYKKCFKAPAGRRPSRNRLYEDSKLVAKMQAKEFGDLRKYTWPMANVLGPAMHYDTVLMYKLIRIMRKLVVDMGVDSLNGPPPNSEAEQHYYDIMSSLDACILPSLLYLDNNCSMSEEIWAVLKYFPYHFRYSLYARWKNDSYQLHPNLIRRCGLAQRDIKALMKRVSKENVKQLGRLVGKYSHCAPGLLFDYILLQIQIYDNLIGPVCDLLKYLTALSFDCLGYCIIESLTLTGRLRFKDDGTSLSLWLQSLASFCGTIYKKYSIELSGLLQYVANQLKSQKSLDLLILREIVHKMAGVESCEEMTNDQLQAMCGGEQLRGEAGYFSQVRNTKKSSNRLKEALANNDLAVAICLLMAQQKHCVIYRETAAHSHLKLVGNLYDQCQDTLVQFGTFLGSTYSVDEYVERLPSIITMLREYHINTDVAFFLARPMFTHQINQKYDQLRKDDPNAKKLTTTQKLQKYLEATQLIMNPIVESVRPLHSSKVWEDISPQFLVTFWSLSMYDLHVPNESYQREVAKLKQLAQQAAEGKDSNQSKNKKEQERYIALMEKLNDERKKQHEHVDKISQRLQEQKDSWFLLRSGKSAKNDTITQFLQLCLFPRCTFTALDALYCAKFVHTIHNLKTSNFSTLLCYDRIFCDITYSVTSCTEGEATRYGRFLCAMLETVMRWHADQAVFNKECANYPGFVTKFRVSNQFSEANDHVGYENYRHVCHKWHYKITKAIVFCLDSKDFMQIRNALIILMRILPHYPVLSKLAQIIERKVDKVREEEKTKRPDLYAIASSYIGQLKLKTPHMLKESVFHQIAERPNKESPTSVGAPAAATRSDKLSPTSPSGNTQGTRAPGGAAPFYNSEQKSVIKEPDAKAASTTRESKSQRGEGNNVTLVSTATSTASNNERESKQRDLPAPRESQSRSKDDQQEQANNGSNGSRQSESRNRDVERDRHDQQDQRSISSHRSSRDIVRVKERTEAELHQRSRERSQRLEELEAQQRKREKTSRRGGEERIRHGDGVETVDLVGSTDNRHYEEFEGRMRDLSSVSNESNGSLHHRQRSHETIEFEKDSKRRKLESSTSSSKKVEELVDSVKKARALKTKERNKDKLSDEERDARKDRKLGRKRDRVDESNSNEHKRRREGQNGEEELRDRERHREKSPRERSHEKFDRERGGASGSRAEERQYISKSARSSRVNY
Protein: ETS proto-oncogene 2, transcription factor (A0A8I6GB76)
Organism: Rattus norvegicus (Rat)
Subcellular location: Nucleus {ECO:0000256|ARBA:ARBA00004123, ECO:0000256|RuleBase:RU004019}.
Interaction partners:
Sequence:
MLSLKCALVVTSLTLSLSLFFKMNDFGIKNMDQVAPVANSFRGTLKRQPAFDTFDGSLFAVLPSLSEEQTLQEVPTGLDSVSHDSATCELPLLTPCSKAVMSQALKATFSGFHKEQRRLGIPKNPWLWNEQQVCQWLHWATNEFSLVNVNLQRFGMNGQMLCNLGKERFLELAPDFVGDILWEHLEQMIKENQEKTEDQYEENSHLNAVPHWINSNTLGFGVEQAPYGMQAPSYLKDGLLDGMCPPSATPAALGSEQELQMLPKSRLNTVSVNYCSISQDFPGGNLNLLNSSSGKPKEHDSPENGGDSFESSDSLLRSWNSQSSLLDVQRVPSFESFEEDCSQSLCLSKPTMSFKDYIQERSDPVEQGKPVIPAAVLAGFTGSGPIQLWQFLLELLSDKSCQSFISWTGDGWEFKLADPDEVARRWGKRKNKPKMNYEKLSRGLRYYYDKNIIHKTSGKRYVYRFVCDLQNLLGFTPEELHAILGVQPDTED
Protein: Protein FATTY ACID EXPORT 1, chloroplastic (At-FAX1) (Q93V66)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Mediates the export of free fatty acid from the plastids. Potentially prefers palmitic acid (C16:0) over oleic acid (C18:1) and stearic acid (C18:0). Not involved in fatty acid activation. Required for biogenesis of the outer pollen cell wall, in particular for the assembly of exine and pollen coat and for the release of ketone wax components.
Subcellular location: Plastid, chloroplast inner membrane {ECO:0000269|PubMed:25646734}; Multi-pass membrane protein {ECO:0000305}.
Interaction partners:
- Protein FATTY ACID EXPORT 2, chloroplastic
- ABC transporter A family member 9
- Protein FATTY ACID EXPORT 4, chloroplastic
- Protein FATTY ACID EXPORT 7
- Long chain acyl-CoA synthetase 4
- Long chain acyl-CoA synthetase 9, chloroplastic
- Phospholipid:diacylglycerol acyltransferase 1
- Protein TRIGALACTOSYLDIACYLGLYCEROL 4, chloroplastic
- Long chain acyl-CoA synthetase 1
- Long chain acyl-CoA synthetase 8
Sequence:
MASQISQLACFSSTNRQFHFQSRSFPCPMIRPQSFVVKSVDGNSSETPASLSYTAEVSKPVVEKTSKPYSTVDETATNKESITEPVEEDVATQPIRAAKIHDFCFGIPYGGLVVSGGLLGFAFSRNLTSLSTGVLYGGGLLALSTLSLKIWREGKSSFPYILGQAVLSAVVFWKNFTAYSMTKKLFPAGVFAVISACMLCFYSYVVLSGGNPPPKKLKPSATSPSY
Protein: Protein BTR1 (Binding to ToMV RNA 1) (Q9LZ82)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Negative regulator of tomato mosaic virus (ToMV) multiplication, but has no effect on the multiplication of cucumber mosaic virus (CMV). Limits the spreading of the virus. Isoform BTR1S: binds preferentially and directly to the 5'terminal region of ToMV genomic RNA, and affects the efficiency of translation rather than mRNA stability.
Subcellular location: Cytoplasm {ECO:0000269|PubMed:18762309}.
Interaction partners:
- Serine/arginine-rich splicing factor RS41
- Polyadenylate-binding protein RBP47A
- RNA-binding
- RBR-type E3 ubiquitin transferase
- Eukaryotic translation initiation factor 2 subunit alpha homolog
- Protein NUCLEAR FUSION DEFECTIVE 2
- Putative RRM-containing protein family protein)
- Polyadenylate-binding protein 8
- At5g19340
- RING-type E3 ubiquitin transferase
Sequence:
MESTESYAAGSPEELAKRSPEPHDSSEADSAEKPTHIRFLVSNAAAGSVIGKGGSTITEFQAKSGARIQLSRNQEFFPGTTDRIIMISGSIKEVVNGLELILDKLHSELHAEDGNEVEPRRRIRLVVPNSSCGGIIGKGGATIKSFIEESKAGIKISPLDNTFYGLSDRLVTLSGTFEEQMRAIDLILAKLTEDDHYSQNVHSPYSYAAGYNSVNYAPNGSGGKYQNHKEEASTTVTIGVADEHIGLVLGRGGRNIMEITQMTGARIKISDRGDFMSGTTDRKVSITGPQRAIQQAETMIKQKVDSATERTTD
Protein: Lipin, putative (Q582G0)
Organism: Trypanosoma brucei brucei (strain 927/4 GUTat10.1)
Interaction partners:
- Phosphatidate cytidylyltransferase
- Acyltransferase
- Phosphatidic acid phosphatase protein, putative
- Phosphatidic acid phosphatase, putative
- Phospholipid:diacylglycerol acyltransferase-like protein
- Ethanolaminephosphotransferase, putative
- Lipase-like protein, putative
- Fungal lipase-type domain-containing protein
- Phosphatidic acid phosphatase alpha, putative
- Glycerol-3-phosphate acyltransferase, putative
Sequence:
MISGFADFFNINHLDMSSDANDVIVVHHPDGRLHSTDFNVRFGKVKVLRPGDKVVRIEVNGQMTSAIMKIGPNGEAFWLKTTCLLDGDCGRPESPVFASDDSQDTGASITSAGGGELPVKSLRHRLFGSWGKNKFNGTQDDPETRSHQPLIKQDCDERLHVNTQAQCSGADAVELHLAEETVVAAERAMQEIKRLSHQNPDYLRDVVMGDTEGEACLQELSGFQDYTRLMVDTTEGSSTAVNSTEITVGVPDDVTQMVQVETSTQGGDGSFSDVAALGSSASDEGLEASADDYIFEDVHLPADTDEGVTAGCSGTPPCGSCTPARSVAPVTPVPDVCASNPPSPCGPTPEGQGAVSQQNDVPSKATASNYSGSGTNDLNSNGITSSDGTYFTRSLVPMEADLLKLNLVPGHNRIRYITHSSLRGEVAVEANVYLWDSTDRLVISDVDGTITKSDVLGHIMPLIGRDWTHPGICSLYSQIQKNGYRLVYLTARSVSQISMTRKFLWNIQQNGVSLPKGPVLTAPKRLFSALAQEVAMKSHFFKIACLQKVVNAFPQKTKPFYAGFGNRLSDMLSYLAVMVPEHKIYVVDSKSLVRVANVTSTYQRLADDVDSSFPPIVRRHNLSYVQFGLGCSAGAHNGGATFKGSEGEPFSDGRRFSSYSSGDKFSPTPTGITNTASFSSQGTSTHPLSALGNGLGLADIDARGLEMSGMSNPSASVAVTNRTNDPTSTYKPCDVVVDREFDSFVYWRAQPTDMIEGESSAFNTKAATNLEQKDQQPRVINEKKASWLPLGLGNTSSENYQQGDTV
Protein: H(+)/Cl(-) exchange transporter 3 (Chloride channel protein 3) (ClC-3) (Chloride transporter ClC-3) (P51792)
Organism: Rattus norvegicus (Rat)
Function: Strongly outwardly rectifying, electrogenic H(+)/Cl(-)exchanger which mediates the exchange of chloride ions against protons. The CLC channel family contains both chloride channels and proton-coupled anion transporters that exchange chloride or another anion for protons (By similarity). The presence of conserved gating glutamate residues is typical for family members that function as antiporters (By similarity).
Subcellular location: [Isoform 1]: Lysosome membrane {ECO:0000250|UniProtKB:P51791}; Multi-pass membrane protein {ECO:0000255}. Late endosome membrane {ECO:0000250|UniProtKB:P51791}; Multi-pass membrane protein {ECO:0000255}. Cell membrane {ECO:0000269|PubMed:10915634}; Multi-pass membrane protein {ECO:0000255}. Early endosome membrane {ECO:0000250|UniProtKB:P51790}; Multi-pass membrane protein {ECO:0000255}. Note=In hepatocytes found in the canalicular membrane. {ECO:0000269|PubMed:10915634}.; SUBCELLULAR LOCATION: [Isoform 2]: Early endosome membrane {ECO:0000269|PubMed:16222710}; Multi-pass membrane protein {ECO:0000255}. Late endosome membrane {ECO:0000269|PubMed:16222710}; Multi-pass membrane protein {ECO:0000255}. Cell membrane {ECO:0000269|PubMed:10915634}; Multi-pass membrane protein {ECO:0000255}. Note=In hepatocytes found in the canalicular membrane. {ECO:0000269|PubMed:10915634}.
Interaction partners:
- Bestrophin
Sequence:
MESEQLFHRGYYRNSYNSITSASSDEELLDGAGAIMDFQTSEDDNLLDGDTAAGTHYTMTNGGSINSSTHLLDLLDEPIPGVGTYDDFHTIDWVREKCKDRERHRRINSKKKESAWEMTKSLYDAWSGWLVVTLTGLASGALAGLIDIAADWMTDLKEGICLSALWYNHEQCCWGSNETTFEERDKCPQWKTWAELIIGQAEGPGSYIMNYIMYIFWALSFAFLAVSLVKVFAPYACGSGIPEIKTILSGFIIRGYLGKWTLMIKTITLVLAVASGLSLGKEGPLVHVACCCGNIFSYLFPKYSTNEAKKREVLSAASAAGVSVAFGAPIGGVLFSLEEVSYYFPLKTLWRSFFAALVAAFVLRSINPFGNSRLVLFYVEYHTPWYLFELFPFILLGVFGGLWGAFFIRANIAWCRRRKSTKFGKYPVLEVIIVAAITAVIAFPNPYTRLNTSELIKELFTDCGPLESSSLCDYRNDMNASKIVDDIPDRPAGVGVYSAIWQLCLALIFKIIMTVFTFGIKVPSGLFIPSMAIGAIAGRIVGIAVEQLAYYHHDWFIFKEWCEVGADCITPGLYAMVGAAACLGGVTRMTVSLVVIVFELTGGLEYIVPLMAAVMTSKWVGDAFGREGIYEAHIRLNGYPFLDAKEEFTHTTLAADVMRPRRSDPPLAVLTQDNMTVDDIENMINETSYNGFPVIMSKESQRLVGFALRRDLTIAIESARKKQEGVVGSSRVCFAQHTPSLPAESPRPLKLRSILDMSPFTVTDHTPMEIVVDIFRKLGLRQCLVTHNGRLLGIITKKDILRHMAQTANQDPASIMFN
Protein: Histone H2AX (H2a/x) (Histone H2A.X) (P27661)
Organism: Mus musculus (Mouse)
Function: Variant histone H2A which replaces conventional H2A in a subset of nucleosomes. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. Required for checkpoint-mediated arrest of cell cycle progression in response to low doses of ionizing radiation and for efficient repair of DNA double strand breaks (DSBs) specifically when modified by C-terminal phosphorylation.
Subcellular location: Nucleus {ECO:0000269|PubMed:11242108, ECO:0000269|PubMed:11571274, ECO:0000269|PubMed:11740565, ECO:0000269|PubMed:12034884, ECO:0000269|PubMed:12447390, ECO:0000269|PubMed:15589157}. Chromosome {ECO:0000269|PubMed:11242108, ECO:0000269|PubMed:11571274, ECO:0000269|PubMed:12034884, ECO:0000269|PubMed:15059890, ECO:0000269|PubMed:15589157, ECO:0000269|PubMed:23039116, ECO:0000269|PubMed:30272023, ECO:0000269|PubMed:30746471, ECO:0000269|PubMed:30949703}.
Interaction partners:
- Mediator of DNA damage checkpoint protein 1
- TP53-binding protein 1
- Breast cancer type 1 susceptibility protein homolog
- Serine-protein kinase ATM
- Breast cancer type 2 susceptibility protein homolog
- E3 ubiquitin-protein ligase RNF168
- G2/mitotic-specific cyclin-B1
- X-ray repair cross-complementing protein 6
- X-ray repair cross-complementing protein 5
- Histone H4
Sequence:
MSGRGKTGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGHYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKKSSATVGPKAPAVGKKASQASQEY
Protein: Golgi microtubule-associated protein, isoform A (SD07366p) (Q9VXU2)
Organism: Drosophila melanogaster (Fruit fly)
Subcellular location: Golgi apparatus {ECO:0000256|ARBA:ARBA00004555}.
Interaction partners:
Sequence:
MSWLNSSLSQLKGQLTNLAQEVLAETAGPGDLEYEGHQAGGASVQDAEQQAKTALELLAETQEQKEQLDKRCEEKDREIAALRRELAKSKQKQESQLAASTSATREPQLQNEEPNVEDSWCWEPDGGDEKGATGAGSGDSASRDKESGLVDIALGNDDVVRLNNRIAELEQLNEQLNVSLEELDSQHELAMRDVLEHKTQLAGQVASLKQLQADRLVEHELSNARQQKQLDELRQTSSAAKKQQEELQRRVEQQEAELIEMQDLLDKRRQDTAELIERVRVAETERERLLKDLEETRQAKEKKTSESSSNSSSTGKHSEDEFIVVRQADATGSGSASGSDRDPDADVTSPPSKEKLRDRLVSLESQISELTLANTQLQDAQLEKQLSINMLGEQLVELEKRLRLSEAEKEQLQVNLQLRLQQLTVQNQELKLHAEAEQEGHAQNLEEQLGDLREDNQRLRQELKTSIAQAKFRQAIAEEKQEITDLDDADSEYGTFELDKLRALLQAEIEDRLDSSFPQQKLERAWNALKDRWHRLDLVEQRLVDVQNQQLVSEHEKKTLEADISQYILQCDELMKNNDLLLNELDKYKRNKLETIEEHHEETIVQLEAQLEEARQKLELASLSSQQQMETHLISSPEKTPVDSELLAKMEQKEQEYLQLQEQLAFAKTELDKRNKLLERNGEQLTKQQQQNQADQKKLEELSQLRETLQRRDEDLKELEEQLSAVRQDLDEKSIQMKISQDQHKLQLANLQNQLQADQEKLRELLQLQDKLEQQKELMEVDQNQQITIIKKELAETTNQLSECQERLTVKEAQLAEIQQQLQEVNEERTRLQEQLLTKEQESGLDSELAKRNQELEDQLLAKEQQLQLNQAELEKLQETLRVNEEQLLAKEEQLHAKESQLQSLESQLQGQLAADESQQLQQTIDGLGQEKNELIKVLQQKHQENTQYYAEIQRLQPFEQQVKELVKEREKLQDQVGFLKEKSDILTTNLLTEQTNQRLLQQQQAESQEQQASTLRDLERLRAHLLEIEELHTQETVELQRDLEESRSRQAILEQQVSKSSTAYTSASIRANQQAETLQAQHALLQQQRDELLAKLGQYEDRELKQQAALTNLQCALEQFQNDKDHDIEMATQRIRREMQAQLDRQGQLQLEMSGLQQQLAEANQGLRAAARLSDQLEAGQQTIAVLRDEVESLKEANGQLEQRLSSSESSQTDKIDKSLIKSLLIGYVVSGHAGDKQQVLRMISSVLDFNAQEADKVGLNKQQSSWLGAILGGGSATASAAGSSRGNENLVQAFVQFLEQESQPQAQSRPTLLSMTGQMDGVTSASATTSTAATSGHLPQASSSFSPATPAASQQDPAAPRTPPVGGSPQLLAMGSNEFAPTRNSSSILKDILSDS
Protein: Transcription factor TDR (Basic helix-loop-helix protein 5) (OsbHLH005) (Protein TAPETUM DEGENERATION RETARDATION) (Q6YUS3)
Organism: Oryza sativa subsp. japonica (Rice)
Function: Transcription factor involved in the regulation of tapetum programmed cell death (PCD) and degradation during male reproductive development. Promotes tapetal PCD. Positively regulates the expression of two tapetum-specific genes, the cysteine protease CP1 and the lipid-transfer protein C6. Acts upstream from and interacts with EAT1/DTD in the regulation of tapetal PCD. Regulates the expression of genes related to aliphatic metabolism during pollen development. May play regulatory role in the lipidic metabolism involved in the formation of pollen wall.
Subcellular location: Nucleus {ECO:0000255|PROSITE-ProRule:PRU00981, ECO:0000269|PubMed:17138695, ECO:0000269|PubMed:23519457}.
Interaction partners:
- UDP-sugar pyrophosphorylase
- Os03g0726900 protein
Sequence:
MGRGDHLLMKNSNAAAAAAAVNGGGTSLDAALRPLVGSDGWDYCIYWRLSPDQRFLEMTGFCCSSELEAQVSALLDLPSSIPLDSSSIGMHAQALLSNQPIWQSSSEEEEADGGGGAKTRLLVPVAGGLVELFASRYMAEEQQMAELVMAQCGGGGAGDDGGGQAWPPPETPSFQWDGGADAQRLMYGGSSLNLFDAAAADDDPFLGGGGGDAVGDEAAAAGAWPYAGMAVSEPSVAVAQEQMQHAAGGGVAESGSEGRKLHGGDPEDDGDGEGRSGGAKRQQCKNLEAERKRRKKLNGHLYKLRSLVPNITKMDRASILGDAIDYIVGLQKQVKELQDELEDNHVHHKPPDVLIDHPPPASLVGLDNDDASPPNSHQQQPPLAVSGSSSRRSNKDPAMTDDKVGGGGGGGHRMEPQLEVRQVQGNELFVQVLWEHKPGGFVRLMDAMNALGLEVINVNVTTYKTLVLNVFRVMVRDSEVAVQADRVRDSLLEVTRETYPGVWPSPQEEDDAKFDGGDGGQAAAAAAAAGGEHYHDEVGGGYHQHLHYLAFD
Protein: ATP synthase mitochondrial F1 complex assembly factor 1 (ATP11 homolog) (Q5TC12)
Organism: Homo sapiens (Human)
Function: May play an essential role for the assembly of the mitochondrial F1-F0 complex.
Subcellular location: Mitochondrion inner membrane {ECO:0000250|UniProtKB:Q811I0}; Peripheral membrane protein {ECO:0000250|UniProtKB:Q811I0}.
Interaction partners:
- ATP synthase mitochondrial F1 complex assembly factor 2
- ATP synthase F
- ATP synthase F
- ATP synthase F
- Transmembrane protein 70
Sequence:
MAAVVVAAAGGAGPAVLQVAGLYRGLCAVRSRALGLGLVSPAQLRVFPVRPGSGRPEGGADSSGVGAEAELQANPFYDRYRDKIQLLRRSDPAAFESRLEKRSEFRKQPVGHSRQGDFIKCVEQKTDALGKQSVNRGFTKDKTLSSIFNIEMVKEKTAEEIKQIWQQYFAAKDTVYAVIPAEKFDLIWNRAQSCPTFLCALPRREGYEFFVGQWTGTELHFTALINIQTRGEAAASQLILYHYPELKEEKGIVLMTAEMDSTFLNVAEAQCIANQVQLFYATDRKETYGLVETFNLRPNEFKYMSVIAELEQSGLGAELKCAQNQNKT
Protein: C-type lectin domain family 2 member H (C-type lectin-related protein F) (Clr-f) (Q8C1T8)
Organism: Mus musculus (Mouse)
Function: Lectin-type cell surface receptor.
Subcellular location: Cell membrane {ECO:0000250}; Single-pass type II membrane protein {ECO:0000250}.
Interaction partners:
- Killer cell lectin-like receptor subfamily B member 1
Sequence:
MNAAKVETSSMGMLQRADLTAADCLQEGEMGKKIQGKCFRIISTVSPVKLYCCYGVIMVLTVAVIALSVALSVRNKIPAMEDREPCYTACPSGWIGFGSKCFYFSEDMGNWTFSQSSCVASNSHLALFHSLEELNFLKRYKGTSDHWIGLHRASTQHPWIWTDNTEYSNLVLTRGGGECGFLSDNGISSGRSYTHRKWICSKFVSSCKSRVGSVPRHV
Protein: ACT domain-containing protein ACR (Protein ACT DOMAIN REPEATS) (F4I0I7)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Interaction partners:
Sequence:
MDVSMSFSQDMDNEYEKLIRRMNPPRVVIDNDSCKKATVIRVDSANEYGILLEVVQILTDLNLTITKAYISSDGGWFMDVFNVTDQDGNKVTDEVVLDYIQKSLGPEACFSTSMRSVGVIPSTDSTVIELTGCDRPGLLSELSAVLTHLKCSVLNAEIWTHNTRAAAVMQVTDDLTGCGISDPERLSRIKNLLRNVLKGSNTPREAKTVVSHGEVHTDRRLHQMMFEDRDYEHRLVDDDSSIQDERQRPDVCVDNWLDKDYSVVTVRCKDRPKLLFDTVCTLTDMQYVVFHGSVDTEGTEAFQEYYVRHIDGSPVKSEAEKQRVIQCLEAAIKRRVSEGLKLELCTTDRVGLLSNVTRIFRENSLTVTRAEVKTKGGKALNTFYVSDASGYSIDAKTIDSIRQTIGQTILKVKNNPQEQQQRQKSPSHESPTRFLFGGLFKSKSFVNFGLVRSYS
Protein: Sarcoplasmic/endoplasmic reticulum calcium ATPase regulator ARLN (SERCA regulator ARLN) (Allregulin) (Another-regulin) (ALN) (Q99M08)
Organism: Mus musculus (Mouse)
Subcellular location: Endoplasmic reticulum membrane {ECO:0000269|PubMed:27923914}; Single-pass membrane protein {ECO:0000255}.
Interaction partners:
- Endoregulin
- Sarcoplasmic/endoplasmic reticulum calcium ATPase regulator DWORF
- Myoregulin
Sequence:
MEVSQAASGTDGVRERRGSFEAGRRNQDEAPQSGMNGLPKHSYWLDLWLFILFDLALFVFVYLLP
Protein: Haloacid dehalogenase-like hydrolase (EC 3.8.1.-) (Q8IJ74)
Organism: Plasmodium falciparum (isolate 3D7)
Interaction partners:
- AKAP-like protein
- 40S ribosomal protein S11, putative
- Ribosomal protein L13
- Large ribosomal subunit protein uL24c
- Mitochondrial ribosomal protein L11, putative
- Superoxide dismutase
- Superoxide dismutase
Sequence:
MHEIVDKNGKKVQKNNLNDEIKIIFTDLDGTLLNSENKVSEQNLESLIRAQEKGIKVVIATGRSIFSVENVIGEHVKKNRISLLPGIYMNGCVTFDEKGSRVIDRIMNNDLKMEIHEFSKQINISKYAIWFCLEKTYCFEINDCIREYMEVEALNPDVIEDNMLEGLTVYKVLFSLPENILENTLKLCREKFSHRINVANTFQSYVELFHQHTNKFEGVKEICKYYNISLNNALAMGDGENDIEMLSGLTHSVGVHNASEKVKNSAAYVGPSNNEHAISHVLKTFCDI
Protein: At1g61990/F8K4_18 (F8K4.18 protein) (Mitochondrial transcription termination factor family protein) (O80704)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Interaction partners:
- Cytochrome oxidase complex assembly protein
- Arogenate dehydrogenase 2, chloroplastic
- Protein ROOT HAIR SPECIFIC 17
- DExH-box ATP-dependent RNA helicase DExH18, mitochondrial
- Putative receptor-like protein kinase At2g30940
- GPI transamidase component Gpi16 subunit family protein
- RNA polymerase I specific transcription initiation factor RRN3 family protein
- Transcription termination factor family protein
- F-box protein At1g11270
- Transcription termination factor MTEF18, mitochondrial
Sequence:
MYSLILHGRRLVQSQKCLSLSVSVQNAFVLSNSFSSARAADVSIRDGRKGKNFTVSYLVDSLGLSKKLAESISRKVSFEDKVNPDSVLSLFRSYGFTDSQISTIITDYPLLLVADAKKALGRKLQILQSRGASSSEITEIVSTVPRILGKKSITVYYDAVKDIIVADTSSSYELPQGSQGNKIRNVSALRELGMPSRLLLPLLVSKSQPVCGKENFDASLKKVVEMGFDPTTTKFVLALRMLYQMSEKTIEEKVVVFRSLGFTVDDVWEIFKKTPSVLKVSKKKILKSAETFLDLGYSRAEFLMMVKRYPPCIEYSVESVKKKNEFLVKKMKWPRNALVLHPQVFGYSMEKRIIPRCNILEALLSKGLLRKGSELPAVSSVLSCTDEGFLDRYVMKHNELVPTLMAIFTKGSVS
Protein: Ataxin-7-like protein 3B (Q96GX2)
Organism: Homo sapiens (Human)
Function: By binding to ENY2, interferes with the nuclear functions of the deubiquitinase (DUB) module of the SAGA complex which consists of ENY2, ATXN7, ATXN7L3 and the histone deubiquitinating component USP22. Affects USP22 DUB activity toward histones indirectly by changing the subcellular distribution of ENY2 and altering ENY2 availability for ATXN7L3 interaction. Regulates H2B monoubiquitination (H2Bub1) levels through cytoplasmic sequestration of ENY2 resulting in loss of nuclear ENY2-ATXN7L3 association which destabilizes ATXN7L3. Affects protein expression levels of ENY2 and ATXN7L3.
Subcellular location: Cytoplasm {ECO:0000269|PubMed:27601583}.
Interaction partners:
- Transcription and mRNA export factor ENY2
- Ataxin-7
Sequence:
MEEISLANLDTNKLEAIAQEIYVDLIEDSCLGFCFEVHRAVKCGYFYLEFAETGSVKDFGIQPVEDKGACRLPLCSLPGEPGNGPDQQLQRSPPEFQ
Protein: G-patch domain-containing protein 1 (Q940M0)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Involved in ribosome biogenesis, required for normal progression of rRNA processing. Seems to promote cell proliferation in leaves.
Subcellular location: Nucleus {ECO:0000255|PROSITE-ProRule:PRU00768}. Nucleus, nucleolus {ECO:0000269|PubMed:29375609}.
Interaction partners:
- F18K10.11 protein
- Bystin
- MIF4G domain-containing protein / MA3 domain-containing protein
- Protein MAK16 homolog
- RNA helicase
- Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH3
- Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH2
- DEAD-box ATP-dependent RNA helicase 10
- At4g01790
- Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein
Sequence:
MAAPEAPVKYVGICKDSAAFKLMKSMGWEEGEGLGKDKQGIKGYVRVTNKQDTSGVGLDKPNPWAFDTTQFDNILKKLKVQAAPTKTSKNDDDSDKEDESEDDAVKSEPAKLKTVAKVTRPQGRYKRREKGKLVNSYSSKDLEGILVKRTEDPSPAVCDIADSMDIEIISEDQDASIKEQKIEEPSSNWWGFKSGFVSGGLLGAKSGKKKLKASERKMFSENDQENLYNMVQDKATAGKQGLGIKDRPKKIAGVRYEGKKTSFDNSDDDDDDDDDDDEEDEEEDEDESEADDDDKDSVIESSLPAKRKHDEIIEPKIKLKNLCKQIVKKDAGKGGFMKLKQLKSLIDEQAPSVLSEFSSRKDAIAYLKLKLERSGKFVVEGKKISLVSSKK
Protein: Protein OPG161 (P68617)
Organism: Vaccinia virus (strain Western Reserve) (VACV) (Vaccinia virus (strain WR))
Function: Forms a complex with OPG162 and OPG190 to coordinate the incorporation of OPG164 into wrapped enveloped virion (EV) membranes and, subsequently, the production of actin tails. Therefore plays an essential role in efficient cell-to-cell spread of viral particles.
Subcellular location: Virion membrane {ECO:0000305}; Single-pass type II membrane protein {ECO:0000305}. Host membrane {ECO:0000305}; Single-pass type II membrane protein {ECO:0000305}. Note=Component of the enveloped virion (EV) membrane. {ECO:0000269|PubMed:8648710}.
Interaction partners:
Sequence:
MMTPENDEEQTSVFSATVYGDKIQGKNKRKRVIGLCIRISMVISLLSMITMSAFLIVRLNQCMSANEAAITDAAVAVAAASSTHRKVASSTTQYDHKESCNGLYYQGSCYILHSDYQLFSDAKANCTAESSTLPNKSDVLITWLIDYVEDTWGSDGNPITKTTSDYQDSDVSQEVRKYFCVKTMN