wanglab/gogpt-training-data huggingface dataset:
Protein: Cyclopropane mycolic acid synthase 1 (CMAS-1) (EC 2.1.1.79) (Cyclopropane-fatty-acyl-phospholipid synthase) (CFA synthase) (Cyclopropane fatty acid synthase) (Mycolic acid methyltransferase) (MA-MT) (S-adenosylmethionine-dependent methyltransferase) (AdoMet-MT) (SAM-MT) (P9WPB7)
Organism: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Function: Catalyzes the conversion of a double bond to a cyclopropane ring at the distal position of an alpha mycolic acid via the transfer of a methylene group from S-adenosyl-L-methionine. Cyclopropanated mycolic acids are key factors participating in cell envelope permeability, host immunomodulation and persistence.
Subcellular location: Cytoplasm {ECO:0000250}.
Interaction partners:
- Amine oxidase domain-containing protein
Sequence:
MPDELKPHFANVQAHYDLSDDFFRLFLDPTQTYSCAYFERDDMTLQEAQIAKIDLALGKLGLQPGMTLLDVGCGWGATMMRAVEKYDVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQFDEPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHTITGLHPKEIHERGLPMSFTFARFLKFIVTEIFPGGRLPSIPMVQECASANGFTVTRVQSLQPHYAKTLDLWSAALQANKGQAIALQSEEVYERYMKYLTGCAEMFRIGYIDVNQFTCQK
Protein: D-aminoacyl-tRNA deacylase 2 (EC 3.1.1.96) (Animalia-specific tRNA deacylase) (ATD) (D-tyrosyl-tRNA deacylase 2) (L-alanyl-tRNA deacylase) (Q68EL2)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Function: Deacylates mischarged D-aminoacyl-tRNAs (By similarity). Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS (By similarity). Probably acts by rejecting L-amino acids from its binding site rather than specific recognition of D-amino acids (By similarity). Catalyzes the hydrolysis of D-tyrosyl-tRNA(Tyr), has no activity on correctly charged L-tyrosyl-tRNA(Tyr) (By similarity). By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality. In contrast to DTD1, deacylates L-Ala mischarged on tRNA(Thr)(G4.U69) by alanine-tRNA ligase AARS. Can deacylate L-Ala due to a relaxed specificity for substrate chirality caused by the trans conformation of the Gly-Pro motif in the active site. Also hydrolyzes correctly charged, achiral, glycyl-tRNA(Gly) in vitro, although in vivo eef1a1a/EF-Tu may protect cognate achiral glycyl-tRNA(Gly) from DTD2-mediated deacetylation (By similarity).
Subcellular location: Cytoplasm {ECO:0000305}.
Interaction partners:
- Iron-sulfur cluster transfer protein NUBPL
- G2/M phase-specific E3 ubiquitin-protein ligase
- Tyrosine--tRNA ligase, cytoplasmic
- Sec1 family domain-containing 1
- Threonyl-tRNA synthetase-like 2.
- Threonyl-tRNA synthetase.
- AA_TRNA_LIGASE_II domain-containing protein.
- Nuclear inhibitor of protein phosphatase 1
Sequence:
MKARVVLQQCLHARLQVKPPDEESEAEWVEVNRGMVIYICFFKGATEDLIPKMVNTLLNVKLCETESGKFTSVLQLPGSVLIVPQATLGGKPKGRGMQYHGNIGKDEGLKLYETFVSLCQSELSSCKNSDILTEVKHGTYGNRQVLKLDTNGPYTHLMEF
Protein: Anoctamin (A0A0B4JCY1)
Organism: Drosophila melanogaster (Fruit fly)
Subcellular location: Cell membrane {ECO:0000256|ARBA:ARBA00004651}; Multi-pass membrane protein {ECO:0000256|ARBA:ARBA00004651}. Membrane {ECO:0000256|RuleBase:RU280814}; Multi-pass membrane protein {ECO:0000256|RuleBase:RU280814}.
Interaction partners:
Sequence:
MLNLGSAKVGALEEATSPPPFSKDESFQLLERSPHNPAISPTTTVPLEPPFTTPLAPFDMELMKRHNLHERLTGKESFWRGRDTSQRFLDQEQLSASRESLGAADKRARFAESNAPTLQLPESAEPRANGKRPTGNRTNPSNPAAPLLPMTDPDFVKGNVGGVYDDRECSCPREFYQRGEINTSLFFEDCVRSIDFVLAYRINAHEPTELENTEKRRVFEANLISQGLEVESSQKDQIWFVKIHAPLEVLRRYAEILKLRMPMKESLCNLRISERSNRLRNAAHYLTNKIPGMSVVNRSTKSVFSSLKHVFQFFLRNIYVDEEIFPKRAHRFTAIYSRDKEYLFDIRQDCFFTTAVRSRIVEFILDRQRFPAKNQHDMAFGIERLIAEGVYSAAYPLHDGEITETGTMRALLYKHWASVPKWYRYQPLDDIKEYFGVKIGLYFAWLGYYTYMLLLASIVGVICFLYSWFSLKNYVPVKDICQSGNTNITMCPLCDWCNFWDLKETCNYAKVTYLIDNPSTVFFAVFMSFWATLFLELWKRYSAEITHRWDLTGFDVHEEHPRPQYLARLEHIPPTRVDYVTNIKEPTVPFWRMKLPATVFSFSVVLLLIALAFVALLAVVVYRMSMLAALKVGASPMTTSSAIVLATASAAFVNLCLLYILNYMYNHLAEYLTELEMWRTQTQFDDSLTLKIYLLQFVNYYASIFYIAFFKGKFVGHPGEYNKLFDYRQEECSSGGCLTELCIQLAIIMVGKQAFNTILEVYLPMFWRKVLAIQVGLSRLFNNTPNPDKAKDERWMRDFKLLDWGARGLFPEYLEMVLQYGFVTIFVAAFPLAPFFALLNNILEMRLDAKKLLTHHKRPVSQRVRDIGVWYRILDCIGKLSVITNGFIIAFTSDMIPRLVYRHYVNKQGTLDGYLNFTLSEFKVIDSPTLYSLAGDLSNITTCRYTDFRLPPSSPEKYTLSSMFYIILACRLGFVVVFENFVALVMILVRWCIPDMSVELRDQIRREVYVTNEIIIDQEAHRARFERAKRSSSVLQTPVDQDMDAASIQEPNAKFINIEKLLTENLTQIEMDAIIHGENPITGISGADCLDEVHKKLSD
Protein: GH01592p (Q7K5N8)
Organism: Drosophila melanogaster (Fruit fly)
Interaction partners:
Sequence:
MKLLLVLPLLVAVVSGQGFGGGGFGGGFGGGLGGGFGGGLGGLGNNRVGGALQNVAGAVQNAVGNIAKAVPKVPLLSNVQDFGDFLSQSGKTYLSAADRALHEGAFASTKNLVEAGNAAFAQGVHTFKQAVNAFADLTHSEFLSQLTGLKRSPEAKARAAASLKLVNLPAKPIPDAFDWREHGGVTPVKFQGTCGSCWAFATTGAIEGHTFRKTGSLPNLSEQNLVDCGPVEDFGLNGCDGGFQEAAFCFIDEVQKGVSQEGAYPYIDNKGTCKYDGSKSGATLQGFAAIPPKDEEQLKKVVATLGPVACSVNGLETLKNYAGGIYNDDECNKGEPNHSILVVGYGSEKGQDYWIVKNSWDDTWGEKGYFRLPRGKNYCFIAEECSYPVV
Protein: HSP70 co-chaperone SNL1 (Suppressor of NUP116-C lethal) (P40548)
Organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Function: Stimulator of ATPase activity of molecular chaperones of the HSP70 family (principally of the SSA class). Stimulation is important for HSP70-substrate complex dissociation after folding of newly synthesized or refolded proteins. SNL1 is probably involved in nuclear pore biogenesis and in particular the folding or refolding of misfolded NUP116, GLE2 and NIC96.
Subcellular location: Endoplasmic reticulum membrane {ECO:0000269|PubMed:9450961}; Single-pass type II membrane protein {ECO:0000269|PubMed:9450961}. Nucleus membrane {ECO:0000269|PubMed:9450961}; Single-pass type II membrane protein {ECO:0000269|PubMed:9450961}.
Interaction partners:
- Hsp70 nucleotide exchange factor FES1
- Heat shock protein homolog SSE1
- Heat shock protein homolog SSE2
- Heat shock protein SSA1
- Heat shock protein STI1
- Ribosome-associated molecular chaperone SSB1
- Hsp70/Hsp90 co-chaperone CNS1
- Ribosome-associated molecular chaperone SSB2
- Nucleotide exchange factor SIL1
Sequence:
MSHNAMEHWKSKLSKTSTSTYVLLAVIAVVFLVTIRRPNGSKGKSSKKRASKKNKKGKNQFEKAPVPLTLEEQIDNVSLRYGNELEGRSKDLINRFDVEDEKDIYERNYCNEMLLKLLIELDSIDLINVDESLRRPLKEKRKGVIKEIQAMLKSLDSLK
Protein: Odorant receptor 33c (P81916)
Organism: Drosophila melanogaster (Fruit fly)
Function: Odorant receptor which mediates acceptance or avoidance behavior, depending on its substrates. The odorant receptor repertoire encodes a large collection of odor stimuli that vary widely in identity, intensity, and duration. May form a complex with Orco to form odorant-sensing units, providing sensitive and prolonged odorant signaling and calcium permeability (By similarity).
Subcellular location: Cell membrane {ECO:0000250}; Multi-pass membrane protein {ECO:0000250}.
Interaction partners:
- Putative odorant receptor 85e
- Putative odorant receptor 85d
- Odorant receptor 46a, isoform B
- Putative odorant receptor 71a
- Odorant receptor 47a
- Putative gustatory receptor 36c
- Putative gustatory receptor 59d
Sequence:
MVIIDSLSFYRPFWICMRLLVPTFFKDSSRPVQLYVVLLHILVTLWFPLHLLLHLLLLPSTAEFFKNLTMSLTCVACSLKHVAHLYHLPQIVEIESLIEQLDTFIASEQEHRYYRDHVHCHARRFTRCLYISFGMIYALFLFGVFVQVISGNWELLYPAYFPFDLESNRFLGAVALGYQVFSMLVEGFQGLGNDTYTPLTLCLLAGHVHLWSIRMGQLGYFDDETVVNHQRLLDYIEQHKLLVRFHNLVSRTISEVQLVQLGGCGATLCIIVSYMLFFVGDTISLVYYLVFFGVVCVQLFPSCYFASEVAEELERLPYAIFSSRWYDQSRDHRFDLLIFTQLTLGNRGWIIKAGGLIELNLNAFFATLKMAYSLFAVVVRAKGI
Protein: N,N'-diacetyllegionaminic acid synthase (EC 2.5.1.101) (Q0P8T1)
Organism: Campylobacter jejuni subsp. jejuni serotype O:2 (strain ATCC 700819 / NCTC 11168)
Function: Involved in biosynthesis of legionaminic acid (5,7-diamino-3,5,7,9-tetradeoxy-D-glycero-D-galacto-non-2-ulosonic acid)(Leg), a sialic acid-like derivative that is incorporated into flagellin via O-linkage to Ser/Thr. Catalyzes the condensation of 2,4-diacetamido-2,4,6-trideoxymannose with phosphoenolpyruvate (PEP) to give N,N'-diacetyllegionaminic acid.
Interaction partners:
- CMP-N,N'-diacetyllegionaminic acid synthase
- GDP/UDP-N,N'-diacetylbacillosamine 2-epimerase
- Sugar-phosphate nucleotide transferase
- Oxidoreductase
- 6-hydroxymethylpterin diphosphokinase MptE-like domain-containing protein
- PseE protein
- Uncharacterized protein
- PseD protein
- Nucleotide sugar dehydratase
- Two-domain bifunctional protein
Sequence:
MKKTLIIAEAGVNHNGDLNLAKKLIEIAADSGADFVKFQSFKAKNCISTKAKKAPYQLKTTANDESQLQMVQKLELDLKAHKELILHAKKCNIAFLSTPFDLESVDLLNELGLKIFKIPSGEITNLPYLKKIAKLNKKIILSTGMANLGEIEEALNVLCKNGAKRQNITLLHCTTEYPAPFNEVNLKAMQSLKDAFKLDVGYSDHTRGIHISLAAVALGACVIEKHFTLDKNMSGPDHKASLEPQELKMLCTQIRQIQKAMGDGIKKASKSEQKNINIVRKSLVAKKDIKKGEIFSEGNLTTKRPANGISAMRYEEFLGKIATKNYKEDELIRE
Protein: mRNA-capping enzyme subunit alpha (GTP--RNA guanylyltransferase) (GTase) (mRNA guanylyltransferase) (EC 2.7.7.50) (Q01159)
Organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Function: Second step of mRNA capping. Transfer of the GMP moiety of GTP to the 5'-diphosphate terminus of RNA via a covalent enzyme-GMP reaction intermediate.
Subcellular location: Nucleus.
Interaction partners:
- mRNA-capping enzyme subunit beta
- mRNA cap guanine-N
- Transcription elongation factor SPT5
- DNA-directed RNA polymerase II subunit RPB1
- DNA-directed RNA polymerase II subunit RPB3
- Polynucleotide 5'-triphosphatase CTL1
- Nuclear cap-binding protein subunit 2
- Eukaryotic translation initiation factor 5B
- DNA-directed RNA polymerase II subunit RPB7
- 5'-3' exoribonuclease 1
Sequence:
MVLAMESRVAPEIPGLIQPGNVTQDLKMMVCKLLNSPKPTKTFPGSQPVSFQHSDVEEKLLAHDYYVCEKTDGLRVLMFIVINPVTGEQGCFMIDRENNYYLVNGFRFPRLPQKKKEELLETLQDGTLLDGELVIQTNPMTKLQELRYLMFDCLAINGRCLTQSPTSSRLAHLGKEFFKPYFDLRAAYPNRCTTFPFKISMKHMDFSYQLVKVAKSLDKLPHLSDGLIFTPVKAPYTAGGKDSLLLKWKPEQENTVDFKLILDIPMVEDPSLPKDDRNRWYYNYDVKPVFSLYVWQGGADVNSRLKHFDQPFDRKEFEILERTYRKFAELSVSDEEWQNLKNLEQPLNGRIVECAKNQETGAWEMLRFRDDKLNGNHTSVVQKVLESINDSVSLEDLEEIVGDIKRCWDERRANMAGGSGRPLPSQSQNATLSTSKPVHSQPPSNDKEPKYVDEDDWSD
Protein: Repulsive guidance molecule A (RGM domain family member A) (Q96B86)
Organism: Homo sapiens (Human)
Function: Member of the repulsive guidance molecule (RGM) family that performs several functions in the developing and adult nervous system. Regulates cephalic neural tube closure, inhibits neurite outgrowth and cortical neuron branching, and the formation of mature synapses. Binding to its receptor NEO1/neogenin induces activation of RHOA-ROCK1/Rho-kinase signaling pathway through UNC5B-ARHGEF12/LARG-PTK2/FAK1 cascade, leading to collapse of the neuronal growth cone and neurite outgrowth inhibition. Furthermore, RGMA binding to NEO1/neogenin leads to HRAS inactivation by influencing HRAS-PTK2/FAK1-AKT1 pathway. It also functions as a bone morphogenetic protein (BMP) coreceptor that may signal through SMAD1, SMAD5, and SMAD8.
Subcellular location: Cell membrane {ECO:0000250}; Lipid-anchor, GPI-anchor {ECO:0000250}.
Interaction partners:
- Neogenin
- Bone morphogenetic protein 2
- Bone morphogenetic protein receptor type-1B
- Growth/differentiation factor 5
- Activin receptor type-1
- Bone morphogenetic protein receptor type-1A
- Repulsive guidance molecule B
- Dorsal root ganglia homeobox protein
Sequence:
MQPPRERLVVTGRAGWMGMGRGAGRSALGFWPTLAFLLCSFPAATSPCKILKCNSEFWSATSGSHAPASDDTPEFCAALRSYALCTRRTARTCRGDLAYHSAVHGIEDLMSQHNCSKDGPTSQPRLRTLPPAGDSQERSDSPEICHYEKSFHKHSATPNYTHCGLFGDPHLRTFTDRFQTCKVQGAWPLIDNNYLNVQVTNTPVLPGSAATATSKLTIIFKNFQECVDQKVYQAEMDELPAAFVDGSKNGGDKHGANSLKITEKVSGQHVEIQAKYIGTTIVVRQVGRYLTFAVRMPEEVVNAVEDWDSQGLYLCLRGCPLNQQIDFQAFHTNAEGTGARRLAAASPAPTAPETFPYETAVAKCKEKLPVEDLYYQACVFDLLTTGDVNFTLAAYYALEDVKMLHSNKDKLHLYERTRDLPGRAAAGLPLAPRPLLGALVPLLALLPVFC
Protein: MAP kinase kinase kinase wis4 (EC 2.7.11.25) (MAP kinase kinase kinase wak1) (MAP kinase kinase kinase wik1) (O14299)
Organism: Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Function: Involved in a signal transduction pathway that is activated in under conditions of heat shock, oxidative stress or limited nutrition. Unlike win1, it is not activated by changes in the osmolarity of the extracellular environment. Activates the wis1 MAP kinase kinase by phosphorylation.
Interaction partners:
- Response regulator mcs4
- Protein kinase wis1
- MAP kinase kinase kinase win1
- Tyrosine-protein phosphatase 1
- Peroxide stress-activated histidine kinase mak2
- Multistep phosphorelay regulator 1
- Peroxide stress-activated histidine kinase mak1
- Glyceraldehyde-3-phosphate dehydrogenase 1
- Tyrosine-protein phosphatase 2
Sequence:
MGLEHTFYPAEDRFEPLLEHSEPVNFVPKENAKSYVRQGFASPHQSLMDNLVDSTESTKRSENFVSHIPLTPSHSGQSEKLMSTRTSHSPYISPTMSYTNHSPANLTRNSSFNHQHYSTTLRSPPSMRGRGIDVNSSHYPHISRPRTSSDSQKMYTRAPVDYYYIQENPYFNNIDQDSISDKSLPSTNQSLHHSEEDTESDNDFSESIHPEFDIDVFYKVSNILYDESDLQDPEKRERLEWHSMLSSVLKGDVMQTEKRRLRLTEPDGHSGTYISEVWLGLQAWLHGRLNADQAEVIRKSREGVEPVLREVIDFQIQDEETTKPPLEQVTEILEKVEQCKQFYISSREMEENVPLSASKEFNYKLNALISWSNVMESIQVETLVLQKWVGNDEFDLTMRTPQFNYDGVENTSSFVERIFRQSGLQRTFEQRTLTTLNRIIHQAKQTISENAQAFEEMKLPTYEDKLLPLVRFPIKLLEEALRLRLAYAKKIKGPNFLIVDSMLDDFKIALSVAVRIKREYIKIASPSPGWSLPTNVDEDYDNVLLDSLKFYFKLLTLKLSSGNKNLYFKEIDFLENEWAFLNEHIYWINGGDIHMAGQFSYLSNSLLLNVHRYVESHLNGPTERTAASLTNWYSTLLKNTQIRFRKILRFSETLNSRFENASDFVISEGHLPDLVNRLSTTGHFLAYTANLERDGVFVIADHTLSENPEALKALLFSKDISNLETIQQNCSYVLILCPVHPIVWKGRIEKVDVPDFSVDLKTNRVRIIASNKREHLQAAKSVFQSISGDLVTLAVECRSSITRVYKEFIRLSKLCMRISSTVVDCVSAVREACSGVNCHDLIYHVFSFAAEFGQRILRFLSFDSYWQTKLKRKITSLAVEWISFICDECDLMDRKTFRWGVGALEFLMLMIRGNNILLIDDAMFLKIREKVGKSMAFLLTHFDVLGAKSKVAAKLQRESTEVSSSPRLTSFGDVEEEALSIQLLQKETMLRIDELEIERNNTLLERLAIGHVLDDSVFRNRDFIKLASSFSNITIRWQQGHFVRSGMFGDVYTGVNMETGDLLAVKEIKLQDSRTFRSTVDQIHNEMTVLERLNHPNVVTYYGVEVHREKVYIFMEFCQGGSLADLLAHGRIEDENVLKVYVVQLLEGLAYIHSQHILHRDIKPANILLDHRGMIKYSDFGSALYVSPPTDPEVRYEDIQPELQHLAGTPMYMAPEIILGTKKGDFGAMDIWSLGCVILEMMTGSTPWSEMDNEWAIMYHVAAMHTPSIPQNEKISSLARDFIEQCFERDPEQRPRAVDLLTHPWITDFRKKTIITMPPATITKKTSLSHTITEEKTAQLLAGRHDDSKAETDSLAASYKEESALPVASNVGLRQPNELRIDSINLPPAIVTPDTINYSVD
Protein: Ovarian TNF receptor (Q0PKX6)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Subcellular location: Membrane {ECO:0000256|ARBA:ARBA00004370}.
Interaction partners:
Sequence:
MDKSEAMKVCMALVIFSLALVGHGAAELGVSADHQNRTARQMTCLENHEYPHNGFCCKNCEAGTYVKEKCTSGQVMGKCSPCEKGTYAEHPTGMEQCLQCSQCHRDQTVVAECTSTSNTKCDCKFGTFCLPDEPCEVCKKCTKCKADEEEVSRCTPTSNTKCRRRPSHPTEGPTEKPSASNSTGTIFLIVSILILLVICAIVCAVLFLKRRRRQQSETDGNLEEVKVPIDECPRSEEEQENSRNAGLEKEEEHRPESRPLLTQETQETISKSIPVEDEDRGLGDSLPNTTSSSQTSLSALPQIIGDSPRSSPPAQRPTDRDQTESWPREDDPPRKLLPLLGEEESLSKSFDLFDSLDVRYHNKFFRSIGVSDNSIKLAETQQPMDKVYDLLRVWMQKEGLRANINTLLQALLDLDQRYSAEHIASKAVERGYYKYE
Protein: Dipeptidyl peptidase 2 (EC 3.4.14.2) (Dipeptidyl aminopeptidase II) (Dipeptidyl peptidase 7) (Dipeptidyl peptidase II) (DPP II) (Quiescent cell proline dipeptidase) (Q9ET22)
Organism: Mus musculus (Mouse)
Function: Plays an important role in the degradation of some oligopeptides.
Subcellular location: Lysosome {ECO:0000250}. Cytoplasmic vesicle {ECO:0000250}. Secreted {ECO:0000250}.
Interaction partners:
- Dipeptidyl peptidase 9
- Dipeptidyl peptidase 8
- Dipeptidyl peptidase 4
Sequence:
MNFHPCYPVDHGVPSWILVLLLSLGLCNLQARADRVLDPDFHENYFEQYMDHFNFESFGNKTFGQRFLVSDKFWKMGEGPIFFYTGNEGDIWSFANNSGFMVELAAQQEALLVFAEHRYYGKSLPFGVQSTQRGYTQLLTVEQALADFAVLLQALRQDLGVHDAPTIAFGGSYGGMLSAYMRMKYPHLVAGALAASAPVVAVAGLGDSYQFFRDVTADFYGQSPKCAQAVRDAFQQIKDLFLQGAYDTISQNFGTCQSLSSPKDLTQLFGFARNAFTVLAMMDYPYPTDFLGPLPANPVKVGCQRLLNEGQRIMGLRALAGLVYNSSGTEPCYDIYRLYQSCADPTGCGTGSDARAWDYQACTEINLTFDSNNVTDMFPEIPFSEELRQQYCLDTWGVWPRQDWLQTSFWGGDLKAASNIIFSNGDLDPWAGGGIQSNLSTSVIAVTIQGGAHHLDLRASNSEDPPSVVEVRKLESTLIREWVAAARLKQPAMPRWPGPKKQHPSR
Protein: PLATZ transcription factor family protein (F4IEB6)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Interaction partners:
- NAD
- At4g03260
- Probable protein S-acyltransferase 12
- N-acetylglucosaminyl transferase component family protein / Gpi1 family protein
- Mannan endo-1,4-beta-mannosidase 2
- Valine--tRNA ligase, mitochondrial 1
- Flowering time control protein FCA
- Probable protein phosphatase 2C 74
- DNA polymerase I A, chloroplastic/mitochondrial
Sequence:
MGAEEETNKTYPHWLKPLLREKFFVQCKLHADSHKSECNMYCLDCTNGPLCSLCLSFHKDHHAIQIRRSSYHDVIRVSEIQKFLDITGVQTYVINSAKVVFLNERPQPRPGKGVINTCEVCYRSLVDSFRFCSLGCKISGISKKKRKEWTNNLSDSDDSYSSTSIGRLKKNDDIMNNSFTPSTPPLSAVNRRIAKRRKGIPHRAPFGGLIIEY
Protein: Proteasome subunit alpha type (E1JGZ9)
Organism: Drosophila melanogaster (Fruit fly)
Subcellular location: Cytoplasm {ECO:0000256|RuleBase:RU000551}. Nucleus {ECO:0000256|RuleBase:RU000551}.
Interaction partners:
Sequence:
MSRGSSAGFDRHITIFSPEGRLYQVEYAFKAIAQENITTVALKSGDCAVVATQKKVTEKNIVPETVTHLFRITKDIGCAMTGRIADSRSQVQKARYEAANFRYKYGYEMPVDVLCRRIADINQVYTQNAEMRPLGCSMVLIAYDNEIGPSVYKTDPAGYFSGFKACSVGAKTLEANSYLEKKYKPNLSEEKAIQLAISCLSSVLAIDFKPNGIEIGVVSKSDPTFRILDEREIEEHLTKIAEKD
Protein: Small ribosomal subunit protein uS10 (40S ribosomal protein S20) (Q54Y41)
Organism: Dictyostelium discoideum (Social amoeba)
Interaction partners:
- Small ribosomal subunit protein eS30
- Small ribosomal subunit protein eS6
- Small ribosomal subunit protein uS9
- Small ribosomal subunit protein uS7
- Small ribosomal subunit protein uS19
- Small ribosomal subunit protein uS5
- Small ribosomal subunit protein uS13
- Small ribosomal subunit protein uS8
- Small ribosomal subunit protein uS3
- Small ribosomal subunit protein uS11
Sequence:
MSMNPIKKTEETVAAPAVNKISITLTSRNPKSLEKVCADIITLAKNKKVKAKGPIRIPNKVLKITTRKSPCGEGTNTWDRFEMRIHKRVIHILSTQDFVKEMNTISIEAGVDVEVIMDKKEAKN
Protein: tRNA:m(4)X modification enzyme TRM13 (EC 2.1.1.225) (tRNA methylase 13) (Q9UTH1)
Organism: Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Function: tRNA methylase which 2'-O-methylates cytidine(4) in tRNA(Pro) and tRNA(Gly)(GCC), and adenosine(4) in tRNA(His).
Subcellular location: Cytoplasm {ECO:0000269|PubMed:16823372}. Nucleus, nucleolus {ECO:0000269|PubMed:16823372}.
Interaction partners:
Sequence:
MARIKKIFTQEELKQIPCPYDHKHTIVRHRLEYHLKRCNARPVERTDPYYKKDINISTSTDASESSSFEIVDLSKEELSKWICLFNRISDSLPTPQKKVLFHPAMNARLEEGTKKKHAIQQASLLGHMEKLHYFDNQGSIYYEFGAGRAELSRYVQHCSQQENVYILIDRDSNRTKHDSRILKDSIKNNWPEPKIIRCKIDIKDLKLDFFASEFRNSGKPVFAYSKHLCGAATDLTLNCLKSSPPNALVIALCCHHHCRWRTLSTFAREQLSHWGISNPQEFQILRQMTGWAVNSLREHMHASGGADSHISGLSHEERVKIGLKCKHIINYMRKLECEKMGYESSLVYYVGEETTLENVALIAYKRIN
Protein: Calcium/calmodulin-dependent protein kinase II association-domain domain-containing protein (F5GUA8)
Organism: Caenorhabditis elegans
Interaction partners:
Sequence:
MVTRMSGVLRTSDSTGSVASNGSTTHDASQVAGTSSQPTSPAAEGAILTTMIATRNLSNLGRNLLNKKEQGPPSTIKESSESSQTIDDNDSEKGGGQLKHENTVVRADGATGIVSSSNSSTASKSSSTNLSAQKQDIVRVTQTLLDAISCKDFETYTRLCDTSMTCFEPEALGNLIEGIEFHRFYFDGNRKNQVHTTMLNPNVHIIGEDAACVAYVKLTQFLDRNGEAHTRQSQESRVWSKKQGRWVCVHVHRSTQPSTNTTVSEF
Protein: Thyrotropin receptor (Q98T85)
Organism: Ictalurus punctatus (Channel catfish) (Silurus punctatus)
Subcellular location: Basolateral cell membrane {ECO:0000256|ARBA:ARBA00004554}; Multi-pass membrane protein {ECO:0000256|ARBA:ARBA00004554}. Cell membrane {ECO:0000256|RuleBase:RU361222}; Multi-pass membrane protein {ECO:0000256|RuleBase:RU361222}.
Interaction partners:
- Gonadotropin subunit beta-2
- Glycoprotein hormones alpha chain
- Lutropin-choriogonadotropic hormone receptor
- Gonadotropin subunit beta-1
- Thyrotropin subunit beta
Sequence:
MVSRCSVAALLLAVVMRLSRGGAFTCPPICSCTADTLSCTAQTERRTRVPSSTTSTNLRLAHLPLKEVQSGTFRGLINVSRIEISQSDSIRKIKGEAFLSIHNVIEISILNIIHLSAMEKGAFTDLPRLRYLSICNTGIRHFPDFSRISSLGLEFFLDMGDNIQLNNIPANAFQGISKADMYMNLVRNGFTQIESHAFNGTRLEKLIMKDNWHLIKIHDDAFEGAEGPTLLDVSSTALKSLPTRGLRGVKVLIARSTPSLKTLPPLDNLAELQEADLTYPSHCCAFHTWKRNNRETAVFDRFKNLTMLCNMDDQANNMDPSGDDLNDINFHYPDLELCASSSSFKCTPEPDAFNPCEDLLGHTFLRAITWIVTVFALVGNLAVLLVLLLSHQKLSVSRFLMCNLAFADLCMGFYLLLIAVADYRSRQEYYNHATDWQTGMGCGVAGFLTVFASELSIYTLTMITLERWHTITHAMQMSRRLRLRHMVTMMAIGWGFSFVIALLPVVGVSSYSKVSICLPMDIETPVSQGYVVAVLVINVAAFLMVCSSYAGIYLSVRNPNVPTRHGHTRMAKRMAVLIFTDFLCMAPISFFAISAALHMPLISVSQSKILLILFYPINSLCNPFLYTIFTRAFRRDMCLLLSRCGCCHAQAEFYRSQGLLGFTLAPRKKRVRKPHSKNFRAYHVKLQGCIFNKAAT
Protein: Pentatricopeptide repeat-containing protein At5g55740, chloroplastic (Protein CHLORORESPIRATORY REDUCTION 21) (Q9FM64)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Plays a major role in chloroplast RNA editing. Acts as a site-recognition transacting factor involved in the edition of the site 2 of ndhD (ndhD-2), which encodes a subunit of the NDH complex.
Subcellular location: Plastid, chloroplast {ECO:0000305}.
Interaction partners:
- Pentatricopeptide repeat-containing protein At4g21190
- NAD
- Pentatricopeptide repeat
- NAD
- Endoglucanase 16
Sequence:
MASLPFNTIPNKVPFSVSSKPSSKHHDEQAHSPSSTSYFHRVSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQIHARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIEEMPFKPDARMIQSLVASCNKQRKTELVDYLSRKLLESEPENSGNYVTISNAYAVEGSWDEVVKMREMMKAKGLKKKPGCSWIQITGEEGVHVFVANDKTHTRINEIQMMLALLLYDMGTGSK
Protein: Guanine nucleotide binding protein (G protein), alpha 13b (Guanine nucleotide-binding protein subunit alpha-13b) (A4FVJ5)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Interaction partners:
Sequence:
MAYFLQSGSFLSLCFPNCFLDSSDAEQLRKSKEIDREIFKEKTFVKRLVKILLLGAGESGKSTFLKQMRIIHGDDFDKGDKEEFRGTIYSNVMKGVRVLVDAREKLHIPWGNPSNQTHADIMMAFDTRSTMVSQGMLETKLFPQYLPSIRALWADIGIQHAYDRRREFQLGESVKYFLDNLDKLGAPDYLPTQQDILLARKPTKGIHEYDFEIKNVPFKMVDVGGQRSERRRWFECFESVTSILFLVSSSEYDQVLMEDRQTNRLMESLNIFETIVNNRVFNNVSIILFLNKTDLLEEKVKSVSIQDYFPEFTDDPWCLGDVKNFLVECFRNKRRDQQQKPLYHHFTTAINTENIRLVFRDVKDTILHDNLKQLMLQ
Protein: Thyroid hormone receptor interactor 11 (Q9CRV3)
Organism: Mus musculus (Mouse)
Subcellular location: Golgi apparatus {ECO:0000256|ARBA:ARBA00004555}.
Interaction partners:
Sequence:
MSSWLGGLGSGLGQSLGQVGGSLASLTGQISNFTKDMLLEGTEDVPADFPNSGREENEATHSVLRSENERLKKLYTDLEEKHEASELQIKQQSSSYRSQLQQKEEEINHLKARQLALQDELLRLQSAAQSAHLGSGSAPAASASSSFSYGVSHRVSAFHEDDMDFGDVISSQQEINRLSNEVSRLESELGHWRHIAQTKVQGAQSSDQTEICKLQNIIKELKQNRSQDLDDHQHELSALQNAHQQKLTEISRRHREEWLRSYDAENEIMRLRSLNQDISLAEDNQKLQMWS
Protein: Gap junction beta-6 protein (Connexin-30) (Cx30) (P70689)
Organism: Mus musculus (Mouse)
Function: One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.
Subcellular location: Cell membrane; Multi-pass membrane protein. Cell junction, gap junction.
Interaction partners:
- Gap junction beta-2 protein
- Gap junction beta-1 protein
- Gap junction alpha-1 protein
- Gap junction gamma-1 protein
- Gap junction beta-3 protein
- ATP-sensitive inward rectifier potassium channel 10
- Pendrin
Sequence:
MDWGTLHTVIGGVNKHSTSIGKVWITVIFIFRVMILVVAAQEVWGDEQEDFVCNTLQPGCKNVCYDHFFPVSHIRLWALQLIFVSTPALLVAMHVAYYRHETARKFIRGEKRNEFKDLEDIKRQKVRIEGSLWWTYTSSIFFRIIFEAAFMYVFYFLYNGYHLPWVLKCGIDPCPNLVDCFISRPTEKTVFTVFMISASVICMLLNVAELCYLLLKLCFRRSKRTQAQRNHPNHALKESKQNEMNELISDSGQNAITSFPS