wanglab/gogpt-training-data huggingface dataset:
Protein: Nuclear receptor subfamily 2 group F member 1-A (COUP transcription factor 1-A) (COUP-TFalpha-A) (zCOUP-TFI) (Seven-up related 44) (Svp[44]) (zSvp[44]) (Steroid receptor homolog SVP 44) (Q06725)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Function: Putative transcription factor that is required in photoreceptor cells precursors during eye development.
Subcellular location: Nucleus {ECO:0000255|PROSITE-ProRule:PRU00407}.
Interaction partners:
Sequence:
MAMVVSVWRDPQEDVAGGPPSGPNPAAQPAREQQQAASAAPHTPQTPSQPGPPSTPGTAGDKGSQNSGQSQQHIECVVCGDKSSGKHYGQFTCEGCKSFFKRSVRRNLTYTCRANRNCPIDQHHRNQCQYCRLKKCLKVGMRREAVQRGRMPPTQPNPGQYALTNGDPLNGHCYLSGYISLLLRAEPYPTSRYGSQCMQPNNIMGIENICELAARLLFSAVEWARNIPFFPDLQITDQVSLLRLTWSELFVLNAAQCSMPLHVAPLLAAAGLHASPMSADRVVAFMDHIRIFQEQVEKLKALHVDSAEYSCIKAIVLFTSDACGLSDAAHIESLQEKSQCALEEYVRSQYPNQPSRFGKLLLRLPSLRTVSSSVIEQLFFVRLVGKTPIETLIRDMLLSGSSFNWPYMSIQ
Protein: EG:23E12.5 protein (Q9XZS6)
Organism: Drosophila melanogaster (Fruit fly)
Interaction partners:
Sequence:
MSVFDDFQRLWMQRFPQSSLSDAWEQDVRASLERHKVRINELSKELEQETLYVEYLERLLSDVERYRVSGGDPKALFEAASGSCASSNNSNCSSTTNGATQEESNTNLDKDFKSSLNLRESPSSTGAKDKDRLSLNPDNKYTTHTNAVIGGIGSEKVSGPLHSTQITADGKRTGELYLKREEDKCKDSNSEDTDGALQQCITELAASLKAQPDNVAGGRLENDVDIDKPLRKSTSQYVTVIQVKEAKDKESADGTTSSSGIGEPQQQPTPPSTFSRYSEATAPPLSPSLTSYAAHVEAKKKMPPRPPPKNIRRVEPPTIPSQQLSSSPKRETYMINTMPSSSSGSLCIDSLGNSLERNIKPSDILRQKSSDNLDSKYSAKRKTTPELSKFVNVNNPELMEELGRKMVSKADSLEQTRRNDSSPSGCGSLGRTSSTPGRSLTPGRTGVGASPTGSLSKTGKLAMADSSSTSSLERRSCLQAVDADIGTESRESGANQRSVGSKESLTSQGISEVIKSYESVSSLSSESAKAVASQQSAAAGGALAECEPYYDSVPLDNGDGEYVFIKPGRTGSSSSRDDLSTPGSSILPLPNVADPESPGRTSNYVNIDFFLQQGIETRSSSLDSDGEYEGPPILRTISHDDQTTTQTTPGAIRKVRCQFIEDRPWPSPLWPLSRYLVPKQTLFFCHFVVLNHLPIIVNIYQQGV
Protein: Aquaporin-9 (Q7Z137)
Organism: Caenorhabditis elegans
Subcellular location: Membrane {ECO:0000256|ARBA:ARBA00004141}; Multi-pass membrane protein {ECO:0000256|ARBA:ARBA00004141}.
Interaction partners:
- Aquaporin
- AQuaPorin or aquaglyceroporin related
- Carbohydrate kinase FGGY N-terminal domain-containing protein
- Putative aquaporin-10
- Aquaporin
- Amino acid transporter transmembrane domain-containing protein
- Moesin/ezrin/radixin homolog 1
- Proton myo-inositol cotransporter hmit-1.1
- Alpha/beta hydrolase fold-3 domain-containing protein
- Probable glycerol kinase
Sequence:
MGVFQDKVASILRIEDQQFTRELLAECIGTFFLLLIGNAANIQAAVAVGGNSTSCHIAWGIGFMFAVYLAASVSGGHLNPAISVAQSILGNLPPWKIIPYAIAQVIGAFLGAAVAYFGHHDDLWKLDGGIRQVTGGQATAGLFTTFPPDHMSVWGSLLDQIIGTAMLSGLVCLITDKRHQIPTGVVPVLAGSIMSMVAMTFGANGGFAINPARDFGPRVFCLCAGYGWEVFSAHGYYFWIPIVGALIGSIIGAWIYKIFVGLHGMNESLDIQPAKGFNVSVKVDREYSDSSGSY
Protein: C2HC/C3H-type domain-containing protein (Q57XS3)
Organism: Trypanosoma brucei brucei (strain 927/4 GUTat10.1)
Interaction partners:
Sequence:
MPHEPSSATDFVQDYAAKRAAQIERAKKIREERQQRITREQRRFSPSASRQHTEEDSNGVEGLTQKQPPVAPSVQWESAEVPPSAPGTLTGGRTSLHPPARARRIANVVEEDFKRATRAGIITPDQARQLWAMLSDQLVQVDNPHANSFSSASISTPAVSTLVEGAVPEFGGSISMDSLRASIAQFKEQQRRKQQQMMGGEPTQSVRGAGAGPHAGRGNNNNNGAFNGVNEAYDVATRMFSPAVTHDTAFGANRQVVPRGNNKESGGGVIDEPQGGEEEWVLRPSPTPAATGRRGKSQKPAWNYDVSVPHENEDNGGGGAIRQAAPPAPQGKTAAPSRTALAKGAGSGQQGGGVALQFDDIPVGGGNRNNFSDREHLTNETTGGSRPPKQGVKAGDGAPTTSKKHGRPHATGTNSGNSNNNNTAVSGYGQRQAGASAGGAASLDDVVVGGSGGGISYNDVGKSGVAPPPPANEPLLPCNLCGRTFRSSILARHEAACAKVQKKRRVFDMKGQRLEGIEGIHDVAPSSHISHGRGDGGTFGAGKQNTTAQMGGQAKLPKWKIQHEQFQAAMRAMRQVTPEDAPGGKSGAQSTGSKSTQQRQLSQPVPLPAEYDDRVPCPHCGRKFAQMTAERHIPKCATTIAKPKGLRPTRR
Protein: Calcium/calmodulin-dependent protein kinase I, isoform H (EC 2.7.11.17) (Q0KIF7)
Organism: Drosophila melanogaster (Fruit fly)
Interaction partners:
Sequence:
MELVTGGELFDRIVEKGSYTEKDASHLIRQILEAVDYMHEQGVVHRDLKPENLLYYSPDDDSKIMISDFGLSKMEDSGIMATACGTPGYVAPEVLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGDFEFDSPYWDEISESAKHFIKNLMCVTVEKRYTCKQALGHAWISGNEASSRNIHGTVSEQLKKNFAKSRWKQAYYAATVIRQMQRMALNSNSNANFDSSNSSNQDSTTPTAATGAWTSNVLSSQQSVQSHAQEMNKSGGSTNAASQ
Protein: Uncharacterized protein (Q57WQ2)
Organism: Trypanosoma brucei brucei (strain 927/4 GUTat10.1)
Interaction partners:
Sequence:
MVVNEAPWLTRWIEALLVVAVFLICCTADMLKCNNGFTYKCSDNGYRTCRREPQSSFCDDLVLPTTVMRELRRCSCEDRKFAELLLHVVEVGAPIAAGGSGGENIERIPLAPLLSNALRGSIGDKIVGNRSSGIFRVPVLEALRKEIGLTVDNSTPCLNSESTFKVFHSHDSVLVPGSVNLLEEVKAAIPFDDGGKSMPGIRSALEELLKRRQQPNEPGASSCMFAHLIFIVVGTPGRGGVWSNNESDTRHAALQLMEVQAHIRRTISRFLRGKRRYTGMLGTVWYVGVPVGFPVHNNSATDGRAAENGRTRSCDVGDGLPRCTMNCTAHTRRLTLYKSVNGELERMVGSHGRRLSARTIILPYNDYFSTIGNLPGESQWVDCFTLSSGGVAEMARLLVEGL
Protein: Protein SHORTAGE IN CHIASMATA 1 (F4KG50)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Essential for the formation of class I meiotic crossovers.
Subcellular location: Nucleus {ECO:0000305}.
Interaction partners:
- DNA mismatch repair protein MSH4
- DNA mismatch repair protein MSH5
- E3 ubiquitin-protein ligase CCNB1IP1 homolog
- ATP-dependent DNA helicase homolog MER3
- At5g52280
- Crossover junction endonuclease MUS81
- DEAD-box ATP-dependent RNA helicase FANCM
- Protein MHF2 homolog
- DNA mismatch repair protein MLH1
- Protein MHF1 homolog
Sequence:
MRTRFLNIDYFSTPPSHVFETLGFLNLPAPDNFPAPIVYNGEEDRLRFGSIENVSIPIGNLPIEAALSKFLSDVVPDRVSVDYRVFEIDDSSLGVYYSDEKDDGDAIADKATPKIIELETPELDFEMENKLLCTSEDHLQCFSEVLEIKNDPVKYEGSDIILQNSKDIQEQIYSVDYIPSDYFTENNTSVAENECFRKIQPWFKDARFPLLEVDEVNLSELSSLSVLDKVFTVLETIEPQDTNAGSSLIINSKELIGSKDYDLLDVLSTDCYLNKSGQSDVVPEDEFSEMDIVTILEISNAEEFQGKVAVPVTYEEFQILDVDISDVFDIFLCLQKAIEPEICYGMFSKEMNFKDFDELVVSSELAFTDDAFKSLPTPILHDYEMTRSLELIYEDVLSKIKPQSLSASNDIYLPWNLLEERNHNHCDYPFEEIVTFNIDYNWEASEGDKWVYDFIFSEDAFCEPLVEKCTEPFYGISNLDEHAPVNTSHGLLENPFQKTGARDCAVDDNAKKATLLFKSMSAFDDLTFFMDPKKAVIEDNLESRVEAAKTTNHKCMSIDSKASCRSGGMHPNPKTEEMILHSVRPSENIQALVGEFVKSYLTLVKDESENLSEDKLKLLSISKGKLIDCIRKANVHKTQLADDKTFTFALLLAIKQMTWYMCFFGIHVAYIYLNKVCRSSNPMKIGLHTLYSAVETEHKSDETDITRSHPSLAVIQGILQSEFARGNSKALLLAEKVFWSSLKRLLMSMGLSYNDLNSPSPSGNRPNVHEAIELGFLPISDCLIISYEQISPSFPVENFSVIVEYGGPNASPRYSFPSKLDSFPSFHFIKVELDMPSACGQLCAGVTVPYSLKMIKGDEVETKTGWLEEVLNFVPLEKVCYAGSSETTNESEFISMPQESERKRGIIEQGLSDQRSVIVVNTKTVDKEMIISRRSTYQKVLAMEKEGVQVVERDSDLPVDLMLSPAVCLLWYDSETVSKKSAATIGTSSSSLSWIGDIATNVLTSLSFSFSTCIMVFEGEPAFLAAVMDSSDELYAAAGSLGISLQMFCSSSANLTDEIILKCIKSSVKLSKLHVKMPESESLAESFLTKFPSVNPLTAQVILSSSGSLLEFMKLPHKSKVERTQKYHVPEESVDLFSSVCRYGAREDSRSVMTDSSSSVSSGPDSDTHHVSVHSGSKKKQYIAEKDEIDMDDLVHFSPSIEFADTQLKSSGDFQLDDSWSSKDHEIFHFDPVTEFSDAPFKPSGISHPNDSWPSKDPERFDKKSGPGSSSKDTFWEKDQPDFSVEDSLPGIPELEDWSFPVKDKFMSQNRGCKFPVMRDFNLHDNRNSENFIADYKGEVIDRADKYLEEDFPPSPGYNRFARIVSDVNEEELPRKSKSSRKLSFFGSLQPNFPKAADIDSSSERYATEKDSKYDNNTSLRGYADNYPAKRQRTLLEEVLTRRSAVPTTELPFREEISHFGGSPLSNAIRSSNQVQSSPWTVDFLNRVRERSRARKQQQSLPSYASPPSLETPGNIKKANTKRKSPSILEFFKYKGGNKLQEEKRQKRSKNSSASPKNERFYSPLKSCTPIDKRAKQSLSYTANGTGQTKLVWK
Protein: Chaperone protein DNAJ, putative (Q38C15)
Organism: Trypanosoma brucei brucei (strain 927/4 GUTat10.1)
Interaction partners:
- Chaperone protein DNAJ, putative
- Uncharacterized protein
- Chaperone protein DnaJ, putative
- Heat shock protein, putative
- Glucose-regulated protein 78, putative
- HECT-type E3 ubiquitin transferase
- mRNA
- Chaperone protein DNAJ, putative
Sequence:
MVKETEYYELLGVAVDATENDIKRAYRRLALRYHPDKNPDNAEAAEMFKQISHAYEVLSDEDKRKLYDQHGKDGLSGGGDEGEFDASDIFSMFFGGGRRQRGERKPRDLVHELAVSLEDMYNGRVKRVAVTRDRLCSQCDGSGVRPGAQQQMCEACNGQGIQVLVQHIIPGVRQQVQLTCQNCGGCGKYVRESDVCRRCHGKQMVRDEKVLEVPIERGMKADDAIRFEGEGDEVLGVRLKGDVLIILAEKPHDVFRRVGDHLIMNYRITLQEALCGFELPVQHLDKRMLLIKIPAGQVIDPEAGWVVHREGMPLPNTGGIERGNLIIHFEVEYPTKLSSRQIDLIADAFHVSEGFPHVGGQKVVLRDETARRQRRNTASARQAQQRRSRDTRGFDNPDVFSMGFGGGQTAHQCTQQ
Protein: Regulator of telomere elongation helicase 1 homolog (EC 5.6.2.-) (Q9W484)
Organism: Drosophila melanogaster (Fruit fly)
Function: ATP-dependent DNA helicase implicated in DNA repair and the maintenance of genomic stability. Acts as an anti-recombinase to counteract toxic recombination and limit crossover during meiosis. Regulates meiotic recombination and crossover homeostasis by physically dissociating strand invasion events and thereby promotes noncrossover repair by meiotic synthesis dependent strand annealing (SDSA) as well as disassembly of D loop recombination intermediates (By similarity). In male germline stem cells (GSCs), plays a role in GSCs maintenance during larval germline development by modulating the expression of genes such as Stat92E and preventing DNA damage-induced checkpoint activation. May play a role in female germline stem cell maintenance.
Subcellular location: Nucleus {ECO:0000255|HAMAP-Rule:MF_03065, ECO:0000269|PubMed:34644293}. Chromosome {ECO:0000269|PubMed:34644293}.
Interaction partners:
- Mlh1, isoform A
- Mutagen-sensitive 101
- Double-strand break repair protein
- Nibrin
- General transcription factor IIH subunit
- MMS19 nucleotide excision repair protein
- General transcription and DNA repair factor IIH helicase/translocase subunit XPB
- General transcription factor IIH subunit 1
- CDK-activating kinase assembly factor MAT1
- General transcription factor IIH subunit 3
Sequence:
MPESLIAGIPVHFPFEPYPVQRAYMEKVIHCLRDGTNGVLESPTGTGKTLSLLCSSLAWIRTRQSEHQKQMVKMEKADFSGLGGGAPGGDLSELAKTMGRANNWGVPKVIYASRTHSQLTQAMRELKRTAYANMRSVVLGSRDQLCIHPEVMREQGNSNKTNMCKLRVHSKTCSFQMRVESRKDHPDLRGPTIMDIEDLVKVGQRLKICPYFASRELVPQADITFMPYNYLLDPKARKANKIELGNTIVILDEAHNIEKICEESASVQIKSSDVAMAIEDVTHIMQVFASGESQDMAGDEPKDFTLDDLTLLKEMLLELEKAIDAIVVDNAVDGTTFPASMMYELLGKANFTYGNVATIVSLLDKLVQYLLVASQQMSIRKGGTFTLLSDLLTIVFANKEDVMSKVYASFKVHVLVEESKQGHGKQQGAKQQGGWLGKGTIAAATGLSKVAKIINFWCFNPGFGMEQLLNTQVRSVILTSGTLAPLKPLIAELAIPVAQHLENPHIVDQSQVYVKIIGTGPDRQQLISNYANRDNPKYISSLGQTILNVARIVPDGLLVFFPSYPMLNKCVDAWQASGLWADISCKKPIFLEPRSKDQFTSTMEEFYQAIRDSKGAVFMAVCRGKVSEGLDFADRNGRAVIITGLPFPPLKDPKVILKRRYLEANRTRENQLLSGQEWYNLDATRAVNQAIGRVIRHRNDYGAILLCDSRFKDASQVQQLSKWIRGHLGDRPQCSPFGPIVRELRQFFKNAEANMKLPDERETDSPLETVCKTEDEPLAAIPKVKREPGSNATFKSANESAIKVEMANSIKTWTPADYASAAGHKLGGAAPNAMDFMSRLDSNVSSIDFNCCTDSKSGSSGLVKIHKRERSSPTAPESSSQVTKKRYKLVENIKVEPSSSQAKEAPEERAAFLRELRSLVTQDQFRRFGKALLEYKNGTYESFQALMAILLDVLSAPKVRYMLVGMRKYLKNEHKDEFDRRVGNL
Protein: Probable aldo-keto reductase 3 (EC 1.1.1.-) (O22707)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Interaction partners:
- NADPH-dependent aldo-keto reductase, chloroplastic
- Tyrosine decarboxylase 2
- E3 ubiquitin-protein ligase RING1-like
- Nuclear pore complex protein NUP107
Sequence:
MAESCRVRRIKLGSQGLEVSAQGLGCMGLTGHYGASKPETEAIALIHHAIHSGVTFLDTSDMYGPETNEILLGKALKDGVREKVELATKFGISYAEGNREIKGDPAYVRAACEASLKRLDVTCIDLYYQHRIDTRVPIEITMGELKKLIEEGKIKYIGLSEASASTIRRAHTVHPITAVQLEWSLWTRDVEEEIVPTCRELGIGIVSYSPLGRGFFASGPKLVENLDNNDFRKALPRFQQENLDHNKILYEKVSAMSEKKGCTPAQLALAWVHHQGDDVCPIPGTTKIENLNQNIRALSVKLTPEEMSELETIAQPESVKGERYMATVPTFKNSDTPPLSSWNAV
Protein: Perfringolysin O (PFO) (Theta-toxin) (Thiol-activated cytolysin) (P0C2E9)
Organism: Clostridium perfringens (strain 13 / Type A)
Function: A cholesterol-dependent toxin that causes cytolysis by forming pores in cholesterol-containing host membranes. After binding to target membranes, the protein assembles into a pre-pore complex. A major conformational change leads to insertion in the host membrane and formation of an oligomeric pore complex. Cholesterol is required for binding to host cell membranes, membrane insertion and pore formation; cholesterol binding is mediated by a Thr-Leu pair in the C-terminus. Can be reversibly inactivated by oxidation.
Subcellular location: Secreted {ECO:0000269|PubMed:2878682}. Host cell membrane; Multi-pass membrane protein {ECO:0000305|PubMed:15851031}. Note=Secreted as soluble protein that then inserts into the host cell membrane and forms huge pores formed by transmembrane beta-strands. {ECO:0000305|PubMed:15851031}.
Interaction partners:
- Collagenase ColA
- Phospholipase C
- Heme-binding protein Shr-like Hb-interacting domain-containing protein
- C4-dicarboxylate transporter/malic acid transport protein
Sequence:
MIRFKKTKLIASIAMALCLFSQPVISFSKDITDKNQSIDSGISSLSYNRNEVLASNGDKIESFVPKEGKKTGNKFIVVERQKRSLTTSPVDISIIDSVNDRTYPGALQLADKAFVENRPTILMVKRKPININIDLPGLKGENSIKVDDPTYGKVSGAIDELVSKWNEKYSSTHTLPARTQYSESMVYSKSQISSALNVNAKVLENSLGVDFNAVANNEKKVMILAYKQIFYTVSADLPKNPSDLFDDSVTFNDLKQKGVSNEAPPLMVSNVAYGRTIYVKLETTSSSKDVQAAFKALIKNTDIKNSQQYKDIYENSSFTAVVLGGDAQEHNKVVTKDFDEIRKVIKDNATFSTKNPAYPISYTSVFLKDNSVAAVHNKTDYIETTSTEYSKGKINLDHSGAYVAQFEVAWDEVSYDKEGNEVLTHKTWDGNYQDKTAHYSTVIPLEANARNIRIKARECTGLAWEWWRDVISEYDVPLTNNINVSIWGTTLYPGSSITYN
Protein: Probable ribonuclease P/MRP protein subunit POP5 (Protein EMBRYO DEFECTIVE 1687) (Q6AWV1)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Essential protein required during embryogenesis. Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends (By similarity). Also a component of RNase MRP (By similarity).
Subcellular location: Nucleus, nucleolus {ECO:0000250|UniProtKB:Q969H6}.
Interaction partners:
- Ribonucleases P/MRP protein subunit POP1
- Protein GAMETOPHYTE DEFECTIVE 1
- Probable pyridoxal 5'-phosphate synthase subunit PDX2
- At5g41270
- Ribonuclease MRP protein subunit POP4
- Uncharacterized protein At1g50910
- Proteinaceous RNase P 2
- Proteinaceous RNase P 3
- Proteinaceous RNase P 1, chloroplastic/mitochondrial
- Protein NUCLEOLAR FACTOR 1
Sequence:
MVGFKNRYMLMEVFLDPDKDLLGEGTPIILTQFNLSKAIKDSILVNFGECGLGSSLGSFQVKYVNPITKLCIVRSSREEHRQVWLAITLVKSIGNCPVILNLLDISGCIRACRDTALKCDKEKFEQCSKSLSEEEIRQMNTSLEKIKLLEN
Protein: Atypical chemokine receptor 3 (C-X-C chemokine receptor type 7) (CXC-R7) (CXCR-7) (Chemokine orphan receptor 1) (G-protein coupled receptor RDC1 homolog) (RDC-1) (O89039)
Organism: Rattus norvegicus (Rat)
Function: Atypical chemokine receptor that controls chemokine levels and localization via high-affinity chemokine binding that is uncoupled from classic ligand-driven signal transduction cascades, resulting instead in chemokine sequestration, degradation, or transcytosis. Also known as interceptor (internalizing receptor) or chemokine-scavenging receptor or chemokine decoy receptor. Acts as a receptor for chemokines CXCL11 and CXCL12/SDF1. Chemokine binding does not activate G-protein-mediated signal transduction but instead induces beta-arrestin recruitment, leading to ligand internalization and activation of MAPK signaling pathway. Required for regulation of CXCR4 protein levels in migrating interneurons, thereby adapting their chemokine responsiveness. In glioma cells, transduces signals via MEK/ERK pathway, mediating resistance to apoptosis. Promotes cell growth and survival. Not involved in cell migration, adhesion or proliferation of normal hematopoietic progenitors but activated by CXCL11 in malignant hemapoietic cells, leading to phosphorylation of ERK1/2 (MAPK3/MAPK1) and enhanced cell adhesion and migration. Plays a regulatory role in CXCR4-mediated activation of cell surface integrins by CXCL12. Required for heart valve development.
Subcellular location: Cell membrane {ECO:0000269|PubMed:21655198}; Multi-pass membrane protein {ECO:0000269|PubMed:21655198}. Early endosome {ECO:0000305|PubMed:21655198}. Recycling endosome {ECO:0000305|PubMed:21655198}. Note=Predominantly localizes to endocytic vesicles, and upon stimulation by the ligand is internalized via clathrin-coated pits in a beta-arrestin -dependent manner. Once internalized, the ligand dissociates from the receptor, and is targeted to degradation while the receptor is recycled back to the cell membrane (By similarity). {ECO:0000250|UniProtKB:P25106}.
Interaction partners:
- Stromal cell-derived factor 1
- Beta-arrestin-2
- C-X-C motif chemokine
- C-X-C chemokine receptor type 4
- Pro-adrenomedullin
- Beta-arrestin-1
- Chemokine
Sequence:
MDVHLFDYVEPGNYSDINWPCNSSDCIVVDTVQCPAMPNKNVLLYTLSFIYIFIFVIGMIANSVVVWVNIQAKTTGYDTHCYILNLAIADLWVVITIPVWVVSLVQHNQWPMGELTCKITHLIFSINLFGSIFFLACMSVDRYLSITYFTSTSSYKKKMVRRVVCVLVWLLAFFVSLPDTYYLKTVTSASNNETYCRSFYPEHSIKEWLIGMELVSVILGFAVPFTIIAIFYFLLARAMSASGDQEKHSSRKIIFSYVVVFLVCWLPYHFVVLLDIFSILHYIPFTCQLENVLFTALHVTQCLSLVHCCVNPVLYSFINRNYRYELMKAFIFKYSAKTGLTKLIDASRVSETEYSALEQNTK
Protein: Major capsid protein (Gene product 13) (gp13) (Q38582)
Organism: Bacillus phage SPP1 (Bacteriophage SPP1)
Function: Capsid protein self-assembles, with the help of the scaffolding protein gp11, to form an icosahedral capsid with a T=7 symmetry, about 61 nm in diameter. The capsid encapsulates the genomic DNA.
Subcellular location: Virion {ECO:0000269|PubMed:10656821, ECO:0000269|PubMed:22514336}. Note=Part of the capsid. {ECO:0000269|PubMed:10656821, ECO:0000269|PubMed:22514336}.
Interaction partners:
Sequence:
MAYTKISDVIVPELFNPYVINTTTQLSAFFQSGIAATDDELNALAKKAGGGSTLNMPYWNDLDGDSQVLNDTDDLVPQKINAGQDKAVLILRGNAWSSHDLAATLSGSDPMQAIGSRVAAYWAREMQKIVFAELAGVFSNDDMKDNKLDISGTADGIYSAETFVDASYKLGDHESLLTAIGMHSATMASAVKQDLIEFVKDSQSGIRFPTYMNKRVIVDDSMPVETLEDGTKVFTSYLFGAGALGYAEGQPEVPTETARNALGSQDILINRKHFVLHPRGVKFTENAMAGTTPTDEELANGANWQRVYDPKKIRIVQFKHRLQA
Protein: FI19380p1 (Midline fasciclin, isoform J) (Q86B94)
Organism: Drosophila melanogaster (Fruit fly)
Interaction partners:
- Complex I-49kD
- Complex I-49kD
Sequence:
MLRLWACLLLLGSIQIQAVPFYGDSSSEEVAEFDDSSDSTHESSDNSSFMPHLTHPLPAHRNLFAPLPFAPLAPLEPQDPLHAQASQRMASVWNGPAPLAPQLHSSHLLPLFSSGYDTEFVPLEHQQQPQGRQETAATVPAQTPSGVEQKPFNVDTITTDVNSPNPAIFFQQSFPFFGNEFFNSFGGFGFGAAQEPWWKGPNVCTEKEEDETVASETEAEETVDTFGQERDGVTNVVRSPLFGQFQFSVNSCAEKPNKHVCTKIVNQNGKKKTLTLTRQCCYGYGRPRNADFTTPCEKIDIKDVEATASDMGAKQFLESARTAGELADMLGAGSGKKVTLFVPNDAAFMEYRGHHQQENNVEDAKAEASKPSIYKLHAVLGEVQLEDVPNEKLLQTELPDQKIRINSYQLPAALGLEPYRFAANCVPIEKHDKLSEQALVHTLGGVLKPLTKNLMDIIRERADMSIMRTVLEKTNLSAMLEDDKPVTIFVPTDAAFDKLEPHLRRALKEGRGCASNILKNHLLDLTFCSLATVPGAKTTAYNLLGEPLLLNRTHRAANQTGPTPIYINNLAKIIDADIMGTNGVLHVIDTILPTESALPMTSLMSQKNLTIFQRLLEASGYDDQFDDLDNVTIFAPTDKALQNTEWARMLKEQPELLNHNLDLLEFLNYHVVKPMIKTCDLSEKSLPTVAGSSVRLNLYSTHALFSDVMNRATVNCARLVHFDDESCGSVLHQVDRALAPPKNNMLKLLEANPNYSKFLELVRKANLTQLLSNDSRSLTLLVPKNDIFEELNESGEGSKPADPMALVKTHIVEDVVCCAGIIPTNWPFVRSIESISGQHLRITRDRRPKIENAGVTKCDVVATNGILHEINDIIVPRPQRQQQQRPQLIPPGAGYQPQGDFDVFF
Protein: Beta-defensin 7 preproprotein (C4P6P9)
Organism: Gallus gallus (Chicken)
Subcellular location: Cytoplasmic granule {ECO:0000256|ARBA:ARBA00004463}. Secreted {ECO:0000256|ARBA:ARBA00004613}.
Interaction partners:
Sequence:
MRILYLLLSVLFVVLQGVAGQPFIPRLIDTCRLRNGICFPGICRRPYYWIGTCNNGIGSCCARGWRS
Protein: Schwannomin-interacting protein 1 (SCHIP-1) (P0DPB4)
Organism: Mus musculus (Mouse)
Interaction partners:
- IQ domain-containing protein J
- Serine/threonine-protein kinase TAO2
Sequence:
MERSEQRVRAAWDCDPGKQADRDYREDGMDLGSDAGSSSSSRASSQSNSTKVTPCSECKSSSSPGGSLDLVSALEDYEEPFPVYQKKVIDEWAPEEDGEEEEEEDDRGYRDDGCPAREPGDVSARIGSSGSGSRSAATTMPSPMPNGNLHPHDPQDLRHNGNVVVAGRPNASRVPRRPIQKTQPPGSRRGGRNRASGGLCLQPPDGGTRVPEEPPAPPMDWEALEKHLAGLQFREQEVRNQGQARTNSTSAQKNERESIRQKLALGSFFDDGPGIYTSCSKSGKPSLSARLQSGMNLQICFVNDSGSDKDSDADDSKTETSLDTPLSPMSKQSSSYSDRDTTEEESESLDDMDFLTRQKKLQAEAKMALAMAKPMAKMQVEVEKQNRKKSPVADLLPHMPHISECLMKRSLKPTDLRDMTIGQLQVIVNDLHSQIESLNEELVQLLLIRDELHTEQDAMLVDIEDLTRHAESQQKHMAEKMPAK
Protein: Peroxisomal trans-2-enoyl-CoA reductase (TERP) (EC 1.3.1.38) (PX-2,4-DCR1) (Peroxisomal 2,4-dienoyl-CoA reductase) (RLF98) (Q9WVK3)
Organism: Rattus norvegicus (Rat)
Function: Participates in chain elongation of fatty acids. Catalyzes the reduction of trans-2-enoyl-CoAs of varying chain lengths from 6:1 to 16:1, having maximum activity with 10:1 CoA. Has no 2,4-dienoyl-CoA reductase activity.
Subcellular location: Peroxisome {ECO:0000250|UniProtKB:Q9JIF5}.
Interaction partners:
- 3-ketoacyl-CoA thiolase A, peroxisomal
- Peroxisomal bifunctional enzyme
- Peroxisomal acyl-coenzyme A oxidase 2
Sequence:
MGSWKSGQSYLAAGLLQNQVAVVTGGATGIGKAISRELLHLGCNVVIASRKLDRLTAAVDELRASQPPSSSTQVTAIQCNIRKEEEVNNLVKSTLAKYGKINFLVNNAGGQFMAPAEDITAKGWQAVIETNLTGTFYMCKAVYNSWMKDHGGSIVNIIVLLNNGFPTAAHSGAARAGVYNLTKTMALTWASSGVRINCVAPGTIYSQTAVDNYGELGQTMFEMAFENIPAKRVGLPEEISPLVCFLLSPAASFITGQLINVDGGQALYTRNFTIPDHDNWPVGAGDSSFIKKVKESLKKQARL
Protein: Transcription initiation factor IIA subunit 2-2 (General transcription factor IIA subunit 2-2) (Transcription initiation factor IIA gamma-2 chain) (TFIIA-gamma-2) (Q9W5B9)
Organism: Drosophila melanogaster (Fruit fly)
Function: TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation. TFIIA in a complex with TBP mediates transcriptional activity (By similarity).
Subcellular location: Nucleus {ECO:0000250}.
Interaction partners:
- Transcription initiation factor IIA subunit 1
- Transcription initiation factor IIB
- Chemosensory protein B 93a
- Chemosensory protein B 93b
- Transcription initiation factor IIE subunit beta
- Transcription initiation factor IIA subunit 2
- General transcription factor IIE subunit 1
- General transcription factor IIF subunit 1
- DNA-directed RNA polymerase II subunit RPB1
- General transcription factor IIH subunit
Sequence:
MNYQHYRATTLGRTLQDTLDEMMERGDITKKIANLVLLRYDKSISTALKDHGTSNMSFTAERLETFRCCDNVWTLILKDAEFREDQHSLKVDVVKIVACLGTDNGNE
Protein: Leucine-rich repeat-containing protein 57 (Q8N9N7)
Organism: Homo sapiens (Human)
Subcellular location: Membrane {ECO:0000305}; Lipid-anchor {ECO:0000305}.
Interaction partners:
- Histone H4 transcription factor
Sequence:
MGNSALRAHVETAQKTGVFQLKDRGLTEFPADLQKLTSNLRTIDLSNNKIESLPPLLIGKFTLLKSLSLNNNKLTVLPDEICNLKKLETLSLNNNHLRELPSTFGQLSALKTLSLSGNQLGALPPQLCSLRHLDVMDLSKNQIRSIPDSVGELQVIELNLNQNQISQISVKISCCPRLKILRLEENCLELSMLPQSILSDSQICLLAVEGNLFEIKKLRELEGYDKYMERFTATKKKFA
Protein: ATP-dependent 6-phosphofructokinase (ATP-PFK) (Phosphofructokinase) (EC 2.7.1.11) (Phosphohexokinase) (O34529)
Organism: Bacillus subtilis (strain 168)
Function: Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis.
Subcellular location: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00339}.
Interaction partners:
- Pyruvate kinase
- Glucose-6-phosphate isomerase
- Probable fructose-bisphosphate aldolase
- Ribonuclease Y
- DEAD-box ATP-dependent RNA helicase CshA
- Enolase
- Triosephosphate isomerase
- Polyribonucleotide nucleotidyltransferase
- Fructose-1,6-bisphosphatase class 3
- 1-phosphofructokinase
Sequence:
MKRIGVLTSGGDSPGMNAAVRAVVRKAIYHDVEVYGIYNGYAGLISGKIEKLELGSVGDIIHRGGTKLYTARCPEFKTVEGREKGIANLKKLGIEGLVVIGGDGSYMGAKKLTEHGFPCVGVPGTIDNDIPGTDFTIGFDTALNTVIDAIDKIRDTATSHERTYVIEVMGRHAGDIALWAGLAGGAESILIPEADYDMHEIIARLKRGHERGKKHSIIIVAEGVGSGVEFGKRIEEETNLETRVSVLGHIQRGGSPSAADRVLASRLGAYAVELLLEGKGGRCVGIQNNKLVDHDIIEILETKHTVEQNMYQLSKELSI
Protein: cDNA, FLJ92221 (B2R4U6)
Organism: Homo sapiens (Human)
Interaction partners:
Sequence:
MPRPRAHRCVWTRVAASRTGAPRSTTASCSASGRCAWASVWRCECCGRRAAGAAASAWASRAWTPRACPCPACRPSCAPTWRSRARRGRPCCLRAARSLGTWSASGWTAAAASSPRSTPAAGSCCVRACPSAPRSGP
Protein: DNA replication licensing factor MCM3 (EC 3.6.4.12) (Q9XVR7)
Organism: Caenorhabditis elegans
Subcellular location: Nucleus {ECO:0000256|ARBA:ARBA00004123, ECO:0000256|RuleBase:RU368061}.
Interaction partners:
- CDT1 Geminin-binding domain-containing protein
- DNA replication licensing factor mcm-4
- DNA replication licensing factor mcm-6
- DNA replication licensing factor MCM2
- Cell division control protein
- DNA replication licensing factor mcm-5
- DNA replication licensing factor MCM7
- Origin recognition complex subunit 2
- DNA replication complex GINS protein SLD5
- Origin recognition complex subunit 5 C-terminal domain-containing protein
Sequence:
MDGQADGMFIDRAEDARKQEITEQYLNFLDNQADTFHYRQKIVKMMNDGESRLVMNLDEIREILPERAEGLLTQSVLEMNCLQSALQMAINRSDVQAVVKTGFHVGFEGTFGERHVNPRTLKSSYLGNLVCCEGIVTKCSTVRQKLLTSVHYCPATNKVLEKKFADFTMLDTAVTNNNYPTEDENKNPLETEFGHSVYKDHQTFTIQELPESAPAGQLPRAVDCVADLDLADRVKPGDRVRIIGVFRVLPNKQNGVSSGSFRSIIIINHIQMLSKEVIPNFEPQDVKDVRKISKSRNPFELLARSLAPSICGHEETKKALLCLLLGGMEKILNNGSRLRGDINVLLIGDPSVAKSQLLRYVLRMAPRAITTTGRGSSGVGLTAAVTTDPDSGERRLEAGAMVLADRGVVCIDEFDKMSDIDRTAIHEVMEQGRVTISKAGIHAKLNARCSVLAAANPVYGRYNPFKSPMENIGMQDSLLSRFDLIFVLLDEHDADKDANVAEHVLKLHTYRTQGEADGTVLPMGGGVETISTINMETKKASSSIYEENTQWAGIQDTKILTMDFMRKYIHLARSVQPKLTDEATEYISEVYADIRSFDITKTDQERTMPVTARQLETLIRLSTAIAKARFSKKVEREDTEKAYNLLHFACFKEKPKARQEYEKKKRAPRIDGDDDEDQSDNEDMATSEEPQSSSVPTAATPRRGVRRRAEDDDSQDSMMDTTIGESQPTAKKARTGPAAIGVDRYKELRKYVRKAFDDIGSTDDMVELQIITDSVQTQAGSHKFTEDELKAGYEQLENDNAAMIAEDKITLI