wanglab/gogpt-training-data huggingface dataset:
Protein: cGMP-dependent 3',5'-cyclic phosphodiesterase (EC 3.1.4.17) (Cyclic GMP-stimulated phosphodiesterase) (CGS-PDE) (cGSPDE) (P14099)
Organism: Bos taurus (Bovine)
Function: cGMP-activated cyclic nucleotide phosphodiesterase with a dual-specificity for the second messengers cAMP and cGMP, which are key regulators of many important physiological processes. Has a higher efficiency with cGMP compared to cAMP (By similarity). Plays a role in cell growth and migration (By similarity).
Subcellular location: [Isoform PDE2A3]: Cell membrane {ECO:0000250|UniProtKB:Q01062}; Peripheral membrane protein {ECO:0000305}.; SUBCELLULAR LOCATION: [Isoform PDE2A1]: Cytoplasm {ECO:0000250|UniProtKB:Q01062}.; SUBCELLULAR LOCATION: [Isoform PDE2A2]: Mitochondrion {ECO:0000250|UniProtKB:Q01062}. Mitochondrion inner membrane {ECO:0000250|UniProtKB:Q01062}. Mitochondrion outer membrane {ECO:0000250|UniProtKB:Q01062}.
Interaction partners:
- Ectonucleotide pyrophosphatase/phosphodiesterase family member 3
- Inosine triphosphate pyrophosphatase
- Deoxycytidine kinase
- Ectonucleotide pyrophosphatase/phosphodiesterase family member 1
- Adenosine kinase
- Adenine phosphoribosyltransferase
- Guanylate kinase
- GTP:AMP phosphotransferase AK3, mitochondrial
- Adenylosuccinate lyase
- GMP synthase
Sequence:
MRRQPAASRDLFAQEPVPPGSGDGALQDALLSLGSVIDVAGLQQAVKEALSAVLPKVETVYTYLLDGESRLVCEEPPHELPQEGKVREAVISRKRLGCNGLGPSDLPGKPLARLVAPLAPDTQVLVIPLVDKEAGAVAAVILVHCGQLSDNEEWSLQAVEKHTLVALKRVQALQQRESSVAPEATQNPPEEAAGDQKGGVAYTNQDRKILQLCGELYDLDASSLQLKVLQYLQQETQASRCCLLLVSEDNLQLSCKVIGDKVLEEEISFPLTTGRLGQVVEDKKSIQLKDLTSEDMQQLQSMLGCEVQAMLCVPVISRATDQVVALACAFNKLGGDLFTDQDEHVIQHCFHYTSTVLTSTLAFQKEQKLKCECQALLQVAKNLFTHLDDVSVLLQEIITEARNLSNAEICSVFLLDQNELVAKVFDGGVVEDESYEIRIPADQGIAGHVATTGQILNIPDAYAHPLFYRGVDDSTGFRTRNILCFPIKNENQEVIGVAELVNKINGPWFSKFDEDLATAFSIYCGISIAHSLLYKKVNEAQYRSHLANEMMMYHMKVSDDEYTKLLHDGIQPVAAIDSNFASFTYTPRSLPEDDTSMAILSMLQDMNFINNYKIDCPTLARFCLMVKKGYRDPPYHNWMHAFSVSHFCYLLYKNLELTNYLEDMEIFALFISCMCHDLDHRGTNNSFQVASKSVLAALYSSEGSVMERHHFAQAIAILNTHGCNIFDHFSRKDYQRMLDLMRDIILATDLAHHLRIFKDLQKMAEVGYDRTNKQHHSLLLCLLMTSCDLSDQTKGWKTTRKIAELIYKEFFSQGDLEKAMGNRPMEMMDREKAYIPELQISFMEHIAMPIYKLLQDLFPKAAELYERVASNREHWTKVSHKFTIRGLPSNNSLDFLDEEYEVPDLDGARAPINGCCSLDAE
Protein: Leukocyte elastase inhibitor B (Serine protease inhibitor EIB) (Serpin B1b) (Q8VHP7)
Organism: Mus musculus (Mouse)
Function: Regulates the activity of the neutrophil proteases. Forms only a stable complex with CTSG/Cathepsin G. During inflammation, limits the activity of inflammatory caspases CASP1 and CASP4 by suppressing their caspase-recruitment domain (CARD) oligomerization and enzymatic activation.
Subcellular location: Cytoplasm {ECO:0000250}.
Interaction partners:
- Albumin
- Thyroglobulin
- T-cell surface glycoprotein CD4
- Interleukin-4
- Granulocyte-macrophage colony-stimulating factor
- Interferon gamma
- Interleukin-5
- Interleukin-13
- H-2 class II histocompatibility antigen, A beta chain
- Toll-like receptor 4
Sequence:
MEQLSSANTLFTLELFHTLKESSPTGNIFFSPFSISSSLAMVFLGAKGSTAAQLSKTLHFDSVEDIHSCFQSLTAEVSKLGASHTLKLANRLYGEKTYNFLPEFLASTQKMYSADLAAVDFQHASEDARKEINQWVKGQTEGKIPELLAKGVVDSMTKLVLVNAIYFKGIWEEQFMTRETINAPFRLNKKDTKTVKMMYQKKKFPFGYISDLKCKVLEMPYQGGELSMVILLPEDIEDESTGLKKIEEQLTLGKLHEWTKHENLRNIDVHVKLPRFKMEESYILNSNLCCLGVQDLFSSGKADLSGMSGSRDLFVSKIVHKSFVDVNEQGTEAAAATGGIIQVLCEKMPTPQEVFTVDHPFLFFIRHNPTANMIFFGRVCSP
Protein: Neurofilament medium polypeptide (NF-M) (160 kDa neurofilament protein) (Neurofilament 3) (Neurofilament triplet M protein) (P12839)
Organism: Rattus norvegicus (Rat)
Function: Neurofilaments usually contain three intermediate filament proteins: NEFL, NEFM, and NEFH which are involved in the maintenance of neuronal caliber. May additionally cooperate with the neuronal intermediate filament proteins PRPH and INA to form neuronal filamentous networks (By similarity).
Subcellular location: Cytoplasm, cytoskeleton {ECO:0000250|UniProtKB:P08553}. Cell projection, axon {ECO:0000250|UniProtKB:P08553}.
Interaction partners:
- Neurofilament light polypeptide
- Kinesin heavy chain isoform 5A
- Kinesin heavy chain isoform 5C
- Kinesin light chain 1
- Kinesin light chain
- Kinesin-1 heavy chain
- Kinesin light chain 4
- Kinesin light chain 3
- mitogen-activated protein kinase
- Mitogen-activated protein kinase 14
Sequence:
MSYTLDSLGNPSAYRRVPTETRSSFSRVSGSPSSGFRSQSWSRGSPSTVSSSYKRSALAPRLAYSSAMLSSAESSLDFSQSSSLLNGGSGGDYKLSRSNEKEQLQGLNDRFAGYIEKVHYLEQQNKEIEAEIHALRQKQASHAQLGDAYDQEIRELRATLEMVNHEKAQVQLDSDHLEEDIHRLKERFEEEARLRDDTEAAIRAVRKDIEESSMVKVELDKKVQSLQDEVAFLRSNHEEEVADLLAQIQASHITVERKDYLKTDISTALKEIRSQLECHSDQNMHQAEEWFKCRYAKLTEAAEQNKEAIRSAKEEIAEYRRQLQSKSIELESVRGTKESLERQLSDIEERHNHDLSSYQDTIQQLENELRGTKWEMARHLREYQDLLNVKMALDIEIAAYRKLLEGEETRFSTFSGSITGPLYTHRQPSVTISSKIQKTKVEAPKLKVQHKFVEEIIEETKVEDEKSEMEDALTVIAEELAASAKEEKEEAEEKEEEPEVEKSPVKSPEAKEEEEGEKEEEEEGQEEEEEEDEGVKSDQAEEGGSEKEGSSEKDEGEQEEEGETEAEGEGEEAEAKEEKKTEGKVEEMAIKEEIKVEKPEKAKSPVPKSPVEEVKPKPEAKAGKDEQKEEEKVEEKKEVAKESPKEEKVEKKEEKPKDVPDKKKAESPVKEKAVEEMITITKSVKVSLEKDTKEEKPQQQEKVKEKAEEEGGSEEEVGDKSPQESKKEDIAINGEVEGKEEEEQETQEKGSGQEEEKGVVTNGLDVSPAEEKKGEDRSDDKVVVTKKVEKITSEGGDGATKYITKSVTVTQKVEEHEETFEEKLVSTKKVEKVTSHAIVKEVTQGD
Protein: Phospholipid-transporting ATPase IG (EC 7.6.2.1) (ATPase IQ) (ATPase class VI type 11C) (P4-ATPase flippase complex alpha subunit ATP11C) (Q8NB49)
Organism: Homo sapiens (Human)
Function: Catalytic component of a P4-ATPase flippase complex which catalyzes the hydrolysis of ATP coupled to the transport of aminophospholipids, phosphatidylserines (PS) and phosphatidylethanolamines (PE), from the outer to the inner leaflet of the plasma membrane. Major PS-flippase in immune cell subsets. In erythrocyte plasma membrane, it is required to maintain PS in the inner leaflet preventing its exposure on the surface. This asymmetric distribution is critical for the survival of erythrocytes in circulation since externalized PS is a phagocytic signal for erythrocyte clearance by splenic macrophages. Required for B cell differentiation past the pro-B cell stage (By similarity). Seems to mediate PS flipping in pro-B cells (By similarity). May be involved in the transport of cholestatic bile acids (By similarity).
Subcellular location: Cell membrane {ECO:0000269|PubMed:21914794, ECO:0000269|PubMed:25315773}; Multi-pass membrane protein {ECO:0000255}. Endoplasmic reticulum membrane {ECO:0000269|PubMed:21914794, ECO:0000269|PubMed:25315773}; Multi-pass membrane protein {ECO:0000255}. Early endosome membrane {ECO:0000269|PubMed:29123098}; Multi-pass membrane protein {ECO:0000255}. Recycling endosome membrane {ECO:0000269|PubMed:29123098}; Multi-pass membrane protein {ECO:0000255}. Note=Efficient exit from the endoplasmic reticulum requires the presence of TMEM30A. Internalized via clathrin-dependent endocytosis in response to ca(2+) signaling induced by G-protein coupled serotonin and histamine receptors. {ECO:0000269|PubMed:29123098}.
Interaction partners:
- Cell cycle control protein 50A
- Cell cycle control protein 50B
- Gamma-2-syntrophin
- XK-related protein 8
- Transcription factor SOX-3
Sequence:
MQMVPSLPPASECAGEEKRVGTRTVFVGNHPVSETEAYIAQRFCDNRIVSSKYTLWNFLPKNLFEQFRRIANFYFLIIFLVQVTVDTPTSPVTSGLPLFFVITVTAIKQGYEDCLRHRADNEVNKSTVYIIENAKRVRKESEKIKVGDVVEVQADETFPCDLILLSSCTTDGTCYVTTASLDGESNCKTHYAVRDTIALCTAESIDTLRAAIECEQPQPDLYKFVGRINIYSNSLEAVARSLGPENLLLKGATLKNTEKIYGVAVYTGMETKMALNYQGKSQKRSAVEKSINAFLIVYLFILLTKAAVCTTLKYVWQSTPYNDEPWYNQKTQKERETLKVLKMFTDFLSFMVLFNFIIPVSMYVTVEMQKFLGSFFISWDKDFYDEEINEGALVNTSDLNEELGQVDYVFTDKTGTLTENSMEFIECCIDGHKYKGVTQEVDGLSQTDGTLTYFDKVDKNREELFLRALCLCHTVEIKTNDAVDGATESAELTYISSSPDEIALVKGAKRYGFTFLGNRNGYMRVENQRKEIEEYELLHTLNFDAVRRRMSVIVKTQEGDILLFCKGADSAVFPRVQNHEIELTKVHVERNAMDGYRTLCVAFKEIAPDDYERINRQLIEAKMALQDREEKMEKVFDDIETNMNLIGATAVEDKLQDQAAETIEALHAAGLKVWVLTGDKMETAKSTCYACRLFQTNTELLELTTKTIEESERKEDRLHELLIEYRKKLLHEFPKSTRSFKKAWTEHQEYGLIIDGSTLSLILNSSQDSSSNNYKSIFLQICMKCTAVLCCRMAPLQKAQIVRMVKNLKGSPITLSIGDGANDVSMILESHVGIGIKGKEGRQAARNSDYSVPKFKHLKKLLLAHGHLYYVRIAHLVQYFFYKNLCFILPQFLYQFFCGFSQQPLYDAAYLTMYNICFTSLPILAYSLLEQHINIDTLTSDPRLYMKISGNAMLQLGPFLYWTFLAAFEGTVFFFGTYFLFQTASLEENGKVYGNWTFGTIVFTVLVFTVTLKLALDTRFWTWINHFVIWGSLAFYVFFSFFWGGIIWPFLKQQRMYFVFAQMLSSVSTWLAIILLIFISLFPEILLIVLKNVRRRSARRNLSCRRASDSLSARPSVRPLLLRTFSDESNVL
Protein: DNA-(apurinic or apyrimidinic site) lyase (EC 4.2.99.18) (E5KPN0)
Organism: Homo sapiens (Human)
Interaction partners:
Sequence:
MPARALLPRRMGHRTLASTPALWASIPCPRSELRLDLVLPSGQSFRWREQSPAHWSGVLADQVWTLTQTEEQLHCTVYRGDKSQASRPTPDELEAVRKYFQLDVTLAQLYHHWGSVDSHFQEVAQKFQGVRLLRQDPIECLFSFICSSNNNIARITGMVERLCQAFGPRLIQLDDVTYHGFPSLQALAGPEVEAHLRKLGLGYRARYVSASARAILEEQGGLAWLQQLRESSYEEAHKALCILPGVGTKVADCICLMALDKPQAVPVDVHMWHIAQRDYSWHPTTSQAKGPSPQTNKELGNFFRSLWGPYAGWAQATPPSYRCCSVPTCANPAMLRSHQQSAERVPKGRKARWGTLDKEIPQAPSPPFPTSLSPSPPSLMLGRGLPVTTSKARHPQIKQSVCTTRWGGGY
Protein: Cta7p (A0A1D8PNI3)
Organism: Candida albicans (strain SC5314 / ATCC MYA-2876) (Yeast)
Subcellular location: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
Interaction partners:
- SWIM-type domain-containing protein
- J protein JJJ1
- Zinc finger PHD-type domain-containing protein
- Zcf6p
- pH-response transcription factor pacC/RIM101
Sequence:
MGTAREHLHAQYQPSPPGPIPSHLTSSFGGTAHHTQPQGPPPSTQYGYSQPIQQLHPIQQYPVLNQASSQPQPQPQPQPQASSPSPIPAVTHSPVTTSTTHTPDQNGASKQRMRVVKACDRCRSHKIKCSGECPCATCLKQAKECTFSNKVFQKRTKGIELPEPKRAKYAEPFGLPEVKKDDQQEYINHLENRVHYLESLLTNTSTDTFKTPLSNEPESEFVTETLFCTSSKWRFSRRHQNLLIAELCRSMYSNLSEESKQLVTLPRYQYFGWNMSGVKYVSSEELPPLPDLGAKLDSKFLTQYYFEEINPLFAILHETVFKEQIVAYEKVLRDQIMLHKDDHDSKGNQTRLFSAMLYLVYALAIRFSEISKPKNPSIEMLQLEEKLFKYGYKVISILSFEWESFELIQGWLLITLYLRVTHRQTSCSHALGQAMDMVKSMGLGFAHDNAKFYSSTAYERLKAKRIFWCVFTFDRVFGLQTGRYCGIRDEDFNNEFPSYDFKHETEKDDWLTLPALGLIHIARVSNFVHTAATDNPHLIKYQQVNAELVKLHEWFNANGFRNDLFFNKKNDSSSLVKAQVKLHYYDLVLCIHSKILFNYIGRRIASHGLKVEMVIDACNGVIEVLDKTNKAGLLYTPWYSVLLLLFNVGVNAITLINGGAFVEQAREVLKNAMRLLTILRKSPIRNEQNKLVFRERFKMVRECIWALKMANRILTLRLQEDIGVLNSIGVDHGSSDVNKQTFTQLGIASESVEGKSTQPKTNEFNQVFEKHLHRSSEIRQSITNDVDSPVSVNSDSTSNVQSIEPVDTYSSAEIDNLLGNIQWFDQWTDFNIDF
Protein: Clusterin (Q9YGP0)
Organism: Gallus gallus (Chicken)
Subcellular location: Cytoplasm, cytosol {ECO:0000256|ARBA:ARBA00004514}. Cytoplasmic vesicle, secretory vesicle, chromaffin granule {ECO:0000256|ARBA:ARBA00004248}. Endoplasmic reticulum {ECO:0000256|ARBA:ARBA00004240}. Mitochondrion membrane {ECO:0000256|ARBA:ARBA00004346}; Peripheral membrane protein {ECO:0000256|ARBA:ARBA00004346}; Cytoplasmic side {ECO:0000256|ARBA:ARBA00004346}. Nucleus {ECO:0000256|ARBA:ARBA00004123}. Secreted {ECO:0000256|ARBA:ARBA00004613, ECO:0000256|PIRNR:PIRNR002368}.
Interaction partners:
Sequence:
MALPLLALLSLGLVCQGGQGLVPPSELKQLSAAGSKYIDTEVENAINGVKQMKTLMDKTSKEHQAMLHTLEETKRRKEEAVKLALEKEKQLAEKQEVCNETMLSLWEECKPCLKHTCMRVYSKICHSGSGLVGRQLEELLNRSSPFSIWVNGERIDALLDREQRQERRFEDLEERFGLMEDGVEDIFQDSTQLYGPAFPFFRTPPFGGFREAFVPPVQRVRLVPPRRRLSRELHPFLQHPVHGFHRLFEMTQRMLDGGHGAWDHLLGGFESESRNFSTDRMVCREIRRNSAGCLRMRDECEKCREILAVDCSQTDPVQSQLREQFEDALRLAERFTRRYDDLLSAFQAEMLNTSSLLDQLNRQFGWVLRLGNLTQGTDGFLQVTTVFSKTPNLEDPSAPADTQVTVQLFDSEPLSLTVPGDISWDDPRFMEIVAEQALQHYKQNNTIE
Protein: Cleavage stimulation factor subunit 3 (E9PLP8)
Organism: Homo sapiens (Human)
Subcellular location: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
Interaction partners:
Sequence:
MSGDGATEQVETRSHCVSQAGLELLDLSDPPASAFQTVGLQAAEYVPEKVKKAEKKLEENPYDLDAWSILIREAQNQPIDKARKTYERLVAQFPSSGRFWKLYIEAEIKAKNYDKVEKLFQRCLMKVLHIDLWKCYLSYVRETKGKLPSYKEKMAQAYDFALDKIGMEIMSYQIWVDYINFLKGVEAVGSYAENQRITAVRRVYQRGCVNPMINIEQLWRDYNKYEEGINIHLAKKMIEDRSRDYMNARRVAKEYETVMKGLDRNAPSVPPQNTPQEAQQVDMWKKYIQWEKSNPLRTEDQTLITKRVMFAYEQCLLVLGHHPDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYEESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDTRTRHHVYVTAALMEYYCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNEDNNTRVLFERVLTSGSLPPEKSGEIWARFLAFESNIGDLASILKVEKRRFTAFKEEYEGKETALLVDRYKFMDLYPCSASELKALGYKDVSRAKLAAIIPDPVVAPSIVPVLKDEVDRKPEYPKPDTQQMIPFQPRHLAPPGLHPVPGGVFPVPPAAVVLMKLLPPPICFQGPFVQVDELMEIFRRCKIPNTVEEAVRIITGGAPELAVEGNGPVESNAVLTKAVKRPNEDSDEDEEKGAVVPPVHDIYRARQQKRIR
Protein: WUSCHEL-related homeobox 6 (Protein PRETTY FEW SEEDS 2) (Q9ZVF5)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Transcription factor that plays a central role in ovule patterning by regulating cell proliferation of the maternal integuments and differentiation of the maegaspore mother cell (MCC). Involved in AGAMOUS (AG) repression in leaves.
Subcellular location: Nucleus {ECO:0000255|PROSITE-ProRule:PRU00108}.
Interaction partners:
- Protein SPOROCYTELESS
- Cleavage and polyadenylation specificity factor subunit 2
- Cleavage and polyadenylation specificity factor subunit 1
- Large ribosomal subunit protein uL14my
- Cleavage stimulation factor subunit 77
Sequence:
MGYISNNNLINYLPLSTTQPPLLLTHCDINGNDHHQLITASSGEHDIDERKNNIPAAATLRWNPTPEQITTLEELYRSGTRTPTTEQIQQIASKLRKYGRIEGKNVFYWFQNHKARERLKRRRREGGAIIKPHKDVKDSSSGGHRVDQTKLCPSFPHTNRPQPQHELDPASYNKDNNANNEDHGTTEESDQRASEVGKYATWRNLVTWSITQQPEEINIDENVNGEEEETRDNRTLNLFPVREYQEKTGRLIEKTKACNYCYYYEFMPLKN
Protein: Lactadherin (MFGM) (Milk fat globule-EGF factor 8) (MFG-E8) (O-acetyl GD3 ganglioside synthase) (AGS) (SED1) (P70490)
Organism: Rattus norvegicus (Rat)
Function: Contributes to phagocytic removal of apoptotic cells in many tissues. Plays an important role in the maintenance of intestinal epithelial homeostasis and the promotion of mucosal healing. Promotes VEGF-dependent neovascularization (By similarity). Specific ligand for the alpha-v/beta-3 and alpha-v/beta-5 receptors. Also binds to phosphatidylserine-enriched cell surfaces in a receptor-independent manner. Zona pellucida-binding protein which may play a role in gamete interaction. Appears to participate in the O-acetylation of GD3 ganglioside sialic acid.
Subcellular location: Membrane {ECO:0000250|UniProtKB:P79385}; Peripheral membrane protein {ECO:0000250|UniProtKB:P79385}. Secreted {ECO:0000250|UniProtKB:P79385}. Cytoplasmic vesicle, secretory vesicle, acrosome membrane {ECO:0000250|UniProtKB:P79385}; Peripheral membrane protein {ECO:0000250|UniProtKB:P79385}. Note=Located in the acrosomal region of zona-pellucida bound sperm. {ECO:0000250|UniProtKB:P79385}.
Interaction partners:
- Integrin alpha-V
- Butyrophilin like 10
- Tetraspanin.
- Tetraspanin
- Tetraspanin
Sequence:
MQFSRVLAALCGVLLCASGLFAASGDFCDSSLCLNGGTCLMGQDNDIYCLCPEGFTGLVCNETEKGPCSPNPCFHDAKCLVTEDTQRGDIFTEYICQCPVGYSGIHCELGCSTKLGLEGGAIADSQISASSVYMGFMGLQRWGPELARLYRTGIVNAWTASSYDSKPWIQVDFLRKMRVSGVMTQGASRAGRAEYLKTFKVAYSLDGRRFEFIQDESGTGDKEFMGNQDNNSLKINMFNPTLEAQYIRLYPVSCHRGCTLRFELLGCELHGCSEPLGLKNNTIPDSQITASSSYKTWNLRAFGWYPHLGRLDNQGKINAWTAQSNSAKEWLQVDLGTQKKVTGIITQGARDFGHIQYVASYKVAHSDDGVQWTVYEEQGTSKVFQGNLDNNSHKKNIFEKPFMARYVRVLPLSWHNRITLRLELLGC
Protein: Transcription initiation factor TFIID subunit 4 (MPT-1) (TAF suppressor gene 2 protein) (TAFII-48) (TBP-associated factor 4) (TBP-associated factor 48 kDa) (P50105)
Organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Function: Functions as a component of the DNA-binding general transcription factor complex TFIID. Binding of TFIID to a promoter (with or without TATA element) is the initial step in pre-initiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modification (histone acetylation by TAF1), facilitation of DNA opening and initiation of transcription.
Subcellular location: Nucleus {ECO:0000269|PubMed:14562095}.
Interaction partners:
- Transcription initiation factor TFIID subunit 3
- Transcription initiation factor TFIID subunit 13
- Transcription initiation factor TFIID subunit 11
- SAGA complex/transcription factor TFIID complex subunit TAF9
- SAGA complex/transcription factor TFIID complex subunit TAF12
- SAGA complex/transcription factor TFIID complex subunit TAF10
- Transcription initiation factor TFIID subunit 1
- Transcription initiation factor TFIID subunit 2
- SAGA complex/transcription factor TFIID complex subunit TAF6
- Transcription initiation factor TFIID subunit 7
Sequence:
MANSPKKPSDGTGVSASDTPKYQHTVPETKPAFNLSPGKASELSHSLPSPSQIKSTAHVSSTHNDAAGNTDDSVLPKNVSPTTNLRVESNGDTNNMFSSPAGLALPKKDDKKKNKGTSKADSKDGKASNSSGQNAQQQSDPNKMQDVLFSAGIDVREEEALLNSSINASKSQVQTNNVKIPNHLPFLHPEQVSNYMRKVGKEQNFNLTPTKNPEILDMMSSACENYMRDILTNAIVISRHRRKAVKINSGRRSEVSAALRAIALIQKKEEERRVKKRIALGLEKEDYENKIDSEETLHRASNVTAGLRAGSKKQYGWLTSSVNKPTSLGAKSSGKVASDITARGESGLKFREAREEPGIVMRDLLFALENRRNSVQTIISKGYAKIRD
Protein: SWI/SNF catalytic subunit (A0A1D8PGK4)
Organism: Candida albicans (strain SC5314 / ATCC MYA-2876) (Yeast)
Subcellular location: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
Interaction partners:
- Snf5p
- Swi1p
- Uncharacterized protein
- Arp9p
- Uncharacterized protein
- Uncharacterized protein
- Actin-related protein 4
- TATA-binding protein-associated factor
- Chromatin structure-remodeling complex subunit RSC1
- Histone H3.1/H3.2
Sequence:
MNRQPTREDIQRAIQRWHQMKQQYGDQVQLNPEFVKLTKFLNTLKMQQQRFQQQYQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSLNHSQQSPLLQNAQGQTPQQPPTPQQFSNFNQNGYNGQQFSSQVHSPAIGGSLSTSGHGTPLVTNANLMTGKKNTRTPNAQFGNQTAAGTPLQQQQQQPFPHGNNSNPMLNQTAQQPPQSQQRQQNQPPSPQSAFTNQQFQLLKSQLQAFKYFVRAPGQGQGQIPQNLIAYVSNPSSAMANDMYLPAVNRPQTNGMDRTMQMPQSIPSQPQQYALQQQNDLSNSNPKSTGGTPEIPEKKKGKRGPKPKNPKKPTKKQLREEEQRLALEKQRQELEQNRLKSSAPQAFPPQAGLQGQAPFPPQPPQQSQQHVPQPPPASTSSSPPGGLPQSQPQPQQQQQQPSRPITKPATPQPLFPDPSPPVNIKSVVPDKANNKKVIIPVTKPNIEVDTFELFDIISDEVKDIPFNTLYAPQSRFQIPSFLPDGINMEDIYVNREGYMQITIEQEKERLRKQIDSLNEKDTEKKLELETQLSQLELIPYQKDLRGKVLIQSWFGKSLLPNSHPNFLARFSSLSMDSVHMTTDLYRLQLESMMREQNKKHGKTIEEIINFSDRSSIKAVKKSDRLSRFMTKINNFHNQTAKEEQKKLEKMAKQRLQALKSNDEEAYLKLLDHTKDTRITHLLEQTNQFLDSLALAVQSQQKEAQDNLAYSGRAIEPASVEPLDDEKREKIDYYNVAHRIKEEVTKQPSILVGGTLKEYQLKGLQWMVSLFNNHLNGILADEMGLGKTIQTISLLTYLVEVKKIPGPFLVIVPLSTVTNWNLEFEKWAPSIKKITYKGTPNQRKVMQHDIRTGNFQLVLTTFEYVIKDKGLLGRIKWVHMIIDEGHRMKNANSKLSETLTQNYHSDYRLILTGTPLQNNLPELWALLNFVLPKIFNSVKSFDEWFNTPFANTGGQDKIELTEEETLLVIRRLHKVLRPFLLRRLKKDVEKDLPNKVEKVVKCKSSALQSKLYQQMLRYNMLYAGDPANGSVPVAIKNANNQIMQLKKICNHPFVYEEVENLINPNIETNDQIWRVAGKFELLDKVLPKFKATGHKVLIFFQMTQIMNIMEDFLRFRGMKYMRLDGGTKADDRTDLLKSFNAPDSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITENSVEEMILERAHKKLEIDGKVIQAGKFDNKSTAEEQEAMLRALIEKEDERRQKGGTDEEEEDLDDDELNQIIARNENELVVFRKMDEERYLATKNAPYPSRLYTEEELPEIYKIDPEELFKKEDVASEEYGRGARERKILQYDDNLTEEQWLKKIEGMVSDDDDDNDDGDGNVDMSDSEMEAKPKKPKGRRGRKPKVARVEDEESQTESDVISVKRQFPEDADDFIPPKRQKSATPGGTTTSGRGRGRGRGRGRGRGRGRGRGSLLSRYTPSVDPLTADERSTLQNQIENILGLIINYKNEHDRVLSELFLVKPPKRFYPDYYVLIKHPIALDVIKKRTASKSYSKIREFLEDIHLMFTNAKIYNEEGSIVYQDAAFLERLSMDKFKELSANLSEDEINKILDFAEFDEMFSLKPLVPSTAIKHPIEAKLEKIDKGEAIDSPLLNASTTAGTEESTPANFD
Protein: Torsin (E9QG29)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Subcellular location: Endoplasmic reticulum lumen {ECO:0000256|ARBA:ARBA00004319, ECO:0000256|PIRNR:PIRNR038079}.
Interaction partners:
Sequence:
MRSAWLLSAGCVLWVCSLTAAIEPISTSIAVGMAAALTGFLAGYQNMFYYFNECCRPEWISYNKTGLKYDLDTKLYGQHVAGQVILKAVTGFMNNKKPKKPLVLSLHGWTGTGKNFVSQLLAENIYVKGMESSFVHLFTATAHFPHEIHIDTYKTQLQDWIRGNVSICPRSMFIFDEMDKMHPGLIDSIKPYLDFYDNLNGVSYREAIFIFLSNAGGENIVQVALDFWKDGKEREEIQLKHLETALSLSVFNNKNSGFWHTSLIDKNLVDFFVPFLPLEYKHIIQCGLAEMIAKGHSPDKEVVEKMAHDLNYFPKEERVFSMQGCKVIPSRLDFYI
Protein: Fibrillarin (M0R2Q4)
Organism: Homo sapiens (Human)
Interaction partners:
Sequence:
MKPGFSPRGGGFGGRGGFGDRGGRGGRGGFGGGRGRGGGFHSGGNRGRGRGGKRGNQSGKNVMVEPHRHEGVFICRGKEDALVTKNLVPGESVYGEKRVSISEGDDKIEYRAWNPFRSKLAAAILGGVDQIHIKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKRTNIIPVIEDARHPHKYRMLIAMVDVIFADVAQPDQTRIVALNAHTFLRNGGHFVISIKANCIDSTASAEAVFASEVKKMQQENMKPQEQL
Protein: ETHR, isoform B (Putative ETH receptor splicing variant b) (Q86C62)
Organism: Drosophila melanogaster (Fruit fly)
Subcellular location: Membrane {ECO:0000256|ARBA:ARBA00004141}; Multi-pass membrane protein {ECO:0000256|ARBA:ARBA00004141}.
Interaction partners:
Sequence:
MLPQIPSYIRTTAMFFCIVIMLLGVVGNVMVPIVIVKTKDMRNSTNIFLTNLSIADLLVLLVCTPTVLVEVNTRPETWVLGHEMCKAVPFVELTVAHASVLTILAISFERYYAICEPLKAGYVCTKGRAILICVLAWGIAALFTSPIIAISTYSVEPYGDGTDAPVCTTAADGFWSIFYFVGCITVFFFLPFGILVLLYAAIAYKLLRPNNAFHRPTSPQPQQPSGGATSGSSQVPSTKGNSHQQSNGMRKHRKQVIFMLVAVVSSFFVCLLPFRAFTLWVILASAEDVEGLGIAGYYNLLYFSRFMLYLNSAMNPILYNLMSSKFRSGFWRLLLTCLGQRPHHHHRHHYHQRQHPTAGGSGRNASTRQEQDAEEGAALAGTTSARHPRRTLRREATFLINSISTSSGTDRTTSSSAWRSNSLSISGLSERERGILGAAIIGTTAATVTTACLQERRASKI
Protein: ERBB receptor feedback inhibitor 1 (I6S2Y9)
Organism: Homo sapiens (Human)
Subcellular location: Cell membrane {ECO:0000256|ARBA:ARBA00004236}. Cytoplasm {ECO:0000256|ARBA:ARBA00004496}. Endomembrane system {ECO:0000256|ARBA:ARBA00029433}; Peripheral membrane protein {ECO:0000256|ARBA:ARBA00029433}; Cytoplasmic side {ECO:0000256|ARBA:ARBA00029433}. Nucleus {ECO:0000256|ARBA:ARBA00004123}.
Interaction partners:
Sequence:
MSIAGVAAQEIRVPLKTGFLHNGRAMGNMRKTYWSSRSEFKNNFLNIDPITMAYSLNSSAQERLIPLGHASKSAPMNGHCFAENGPSQKSSLPPLLIPPSENLGPHEEDQVVCGFKKLTVNGVCASTPPLTPIKNSPSLFPCAPLCERGSRPLPPLPISEALSLDDTDCEVEFLTSSDTDFLLEDSTLSDFKYDVPGRRSFRGCGQINYAYFDTPAVSAADLSYVSDQNGGVPDPNPPPPQTHRRLRRSHSGPAGSFNKPAIRISNCCIHRASPNSDEDKPEVPPRVPIPPRPVKPDYRRWSAEVTSSTYSDEDRPPKVPPREPLSPSNSRTPSPKSLPSYLNGVMPPTQSFAPDPKYVSSKALQRQNSEGSASKVPCILPIIENGKKVSSTHYYLLPERPPYLDKYEKFFREAEETNGGAQIQPLPADCGISSATEKPDSKTKMDLGGHVKRKHLSYVVSP
Protein: Histone chaperone cia1 (Anti-silencing function protein 1) (O74515)
Organism: Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Function: Histone chaperone that facilitates histone deposition and histone exchange and removal during nucleosome assembly and disassembly.
Subcellular location: Nucleus {ECO:0000269|PubMed:16823372}.
Interaction partners:
- Protein hir1
- Chromatin assembly factor 1 subunit B
- Histone acetyltransferase rtt109
- Histone H4
- Histone H3.1/H3.2
- NASP-related protein sim3
- Serine/threonine-protein kinase cds1
- Histone transcription regulator slm9
- Chromatin assembly factor 1 subunit A
- Histone promoter control protein 2
Sequence:
MSIVNILSVNVLNNPAKFSDPYKFEITFECLEPLKSDLEWKLTYVGSATSQSYDQILDTLLVGPIPIGINKFVFEADPPNIDLLPQLSDVLGVTVILLSCAYEDNEFVRVGYYVNNEMEGLNLQEMDDAEIKKVKVDISKVWRSILAEKPRVTRFNIQWDNPDFDDAPPVQPDADEEEEEEEADEMEEEFDEEGEGDEEEEEEDDGDGDGEGDGDGEGENDGKGSEEEEEEEIDIEEEEEESALANASAAEEKPEEKPETSQ
Protein: Formate hydrogenlyase subunit 2 (FHL subunit 2) (Hydrogenase-3 component B) (P0AAK1)
Organism: Escherichia coli (strain K12)
Function: Probable electron transfer protein for hydrogenase 3.
Interaction partners:
- Formate hydrogenlyase subunit 4
- Formate hydrogenlyase subunit 6
- Formate dehydrogenase H
- Formate hydrogenlyase subunit 3
- Formate hydrogenlyase subunit 7
- Formate hydrogenlyase subunit 5
- Formate hydrogenlyase regulatory protein HycA
- Formate hydrogenlyase maturation protein HycH
- Hydrogenase 3 maturation protease
- Formate hydrogenlyase transcriptional activator FhlA
Sequence:
MNRFVIADSTLCIGCHTCEAACSETHRQHGLQSMPRLRVMLNEKESAPQLCHHCEDAPCAVVCPVNAITRVDGAVQLNESLCVSCKLCGIACPFGAIEFSGSRPLDIPANANTPKAPPAPPAPARVSTLLDWVPGIRAIAVKCDLCSFDEQGPACVRMCPTKALHLVDNTDIARVSKRKRELTFNTDFGDLTLFQQAQSGEAK
Protein: Kinetochore localized astrin (SPAG5) binding protein (H0YM11)
Organism: Homo sapiens (Human)
Interaction partners:
Sequence:
XLNESEKDCGQDRRAPGVQPCRLVTMTSVVKTVYSLQPPSALSGGQPADTQTRATSKSLLPVRSKEVDVSKQLHSGGPENDVTKITKLRRENGQMKATDTATRRNVRKGRSFALVATQAGVQWRNLSSPQPPPPGFKRLSCLSLPNTWDYSYKPLSKQKSEEELKDKNQLLEAVNKQLHQKLTETQGELKDLTQKVELLEKFRDNCLAILESKGLDP
Protein: Putative F-box protein At1g65770 (Q9SHX9)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Interaction partners:
- mRNA-decapping enzyme-like protein
- mRNA-decapping enzyme subunit 2
- COP9 signalosome complex subunit 5b
- COP9 signalosome complex subunit 5a
- GDP-L-galactose phosphorylase 2
- Pyridoxine/pyridoxamine 5'-phosphate oxidase 1, chloroplastic
- GDP-mannose 3,5-epimerase
- Mannose-1-phosphate guanylyltransferase 1
- L-galactono-1,4-lactone dehydrogenase, mitochondrial
- GDP-L-galactose phosphorylase 1
Sequence:
MADWSTLPVDLLNMIAGRLFSNIELKRFRSICRSWRSSVPGAGKKNPFRTRPLILLNPNPNKPLTDHRRRGEFLSRSAFFRVTLSSSPSQGWLIKSDVDVSSGKLHLLDPLSRLPMEHSRKRVDLSEFTITEIREAYQVHDWRTRKETRPIFKRVALVKDKEGDNQVLGIRSTGKMMYWDIKTWKAKEEGYEFSDIIVHKGQTYALDSIGIVYWIRSDLKFIRFGPLVGDWTGDRRLVECCGEFYIVERLVGESTWKRKADDTGYEYAKTVGFKVYKFDDEQGKMMEVKSLGDKAFVIATDTCFSVLAHEFYGCLENAIYFTDDTMIKVFKLDNGNGSSIETTIYPYAQSCFQMFVPSFL