wanglab/gogpt-training-data huggingface dataset:
Protein: Uncharacterized protein new12 (G2TRK8)
Organism: Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Function: The SMN complex catalyzes the assembly of small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome, and thereby plays an important role in the splicing of cellular pre-mRNAs. Most spliceosomal snRNPs contain a common set of Sm proteins smb1, smd1, smd2, smd3, sme1, smf1 and smg1 that assemble in a heptameric protein ring on the Sm site of the small nuclear RNA to form the core snRNP (Sm core) (By similarity). In the cytosol, the Sm proteins smd1, smd2, sme1, smf1 and smg1 (5Sm) are trapped in an inactive 6S pICln-Sm complex by the chaperone saf5 (By similarity). To complete assembly of core snRNPs, the SMN complex accepts 5Sm from saf5 (By similarity). Binding of snRNA inside 5Sm triggers eviction of the SMN complex, thereby allowing binding of smd3 and smb1 to complete assembly of the core snRNP (By similarity).
Interaction partners:
- Uncharacterized protein C16H5.15
- Gem-associated protein 7 homolog
- SMN complex subunit yip11/gem2
- SMN complex subunit smn1
- Small nuclear ribonucleoprotein Sm D3
- Small nuclear ribonucleoprotein Sm D1
- Small nuclear ribonucleoprotein Sm D2
Sequence:
MDSHTTEKRRGSYLRVLFKNGRLPVEGFLWNCDPLTGTLILIQPLTPNTDEVEDTHYRFYGIMSDAIQTIEPDESMSPLNQQSLAEYDSLLTS
Protein: Estrogen related receptor alpha (A0A6E1WCP9)
Organism: Homo sapiens (Human)
Subcellular location: Nucleus {ECO:0000256|ARBA:ARBA00004123, ECO:0000256|PIRNR:PIRNR002527}.
Interaction partners:
Sequence:
MRTAGPTPAVSWRKRSRKRPRCPFVSYKQPAAPPSEGTRRGGAARPEEAAEEGPPAAPGSLRHSGPLGPHACPTALPEPQVTSAMSSQVVGIEPLYIKAEPASPDSPKGSSETETEPPVALAPGPAPTRCLPGHKEEEDGEGAGPGEQGGGKLVLSSLPKRLCLVCGDVASGYHYGVASCEACKAFFKRTIQGSIEYSCPASNECEITKRRRKACQACRFTKCLRVGMLKEGVRLDRVRGGRQKYKRRPEVDPLPFPGPFPAGPLAVAGGPRKTAPVNALVSHLLVVEPEKLYAMPDPAGPDGHLPAVATLCDLFDREIVVTISWAKSIPGFSSLSLSDQMSVLQSVWMEVLVLGVAQRSLPLQDELAFAEDLVLDEEGARAAGLGELGAALLQLVRRLQALRLEREEYVLLKALALANSDSVHIEDAEAVEQLREALHEALLEYEAGRAGPGGGAERRRAGRLLLTLPLLRQTAGKVLAHFYGVKLEGKVPMHKLFLEMLEAMMD
Protein: Probable glucuronosyltransferase Os04g0103100 (EC 2.4.-.-) (OsGT43H) (Q7XTB2)
Organism: Oryza sativa subsp. japonica (Rice)
Function: Involved in the synthesis of glucuronoxylan hemicellulose in secondary cell walls.
Subcellular location: Golgi apparatus membrane {ECO:0000269|PubMed:24525904}; Single-pass type II membrane protein {ECO:0000305|PubMed:24525904}.
Interaction partners:
Sequence:
MASIRRPHSPAKQQHLLRHGHLGPFASSSPPSSPLRHSSSSSSPRSAAHHHHHLLAAAGHTSFRRPLPRFAAFFLLGSFLGLLHFLSHLPRPLGPIPNPNSHHRHRDPFPILQHPHPPSTPHSNHKLLIVVTPTRARPSQAYYLTRMAHTLRLLHDSPLLWIVVQAGNPTPEAAAALRRTAVLHRYVGCCHNINASAPDFRPHQINAALDIVDNHRLDGVLYFADEEGVYSLHLFHHLRQIRRFATWPVPEISQHTNEVVLQGPVCKQGQVVGWHTTHDGNKLRRFHLAMSGFAFNSTMLWDPKLRSHLAWNSIRHPEMVKESLQGSAFVEQLVEDESQMEGIPADCSQIMNWHVPFGSESVVYPKGWRVATDLDVIIPLK
Protein: Histidine--tRNA ligase, mitochondrial (EC 6.1.1.21) (Histidyl-tRNA synthetase) (HisRS) (P07263)
Organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Function: Catalyzes the aminoacylation of histidyl-tRNA in both the cytoplasm and the mitochondrion.
Subcellular location: [Isoform Cytoplasmic]: Cytoplasm.; SUBCELLULAR LOCATION: [Isoform Mitochondrial]: Mitochondrion.
Interaction partners:
- Lysine--tRNA ligase, cytoplasmic
- Valine--tRNA ligase, mitochondrial
- Asparagine--tRNA ligase, cytoplasmic
- tRNA
- Lysine--tRNA ligase, mitochondrial
- Threonine--tRNA ligase, cytoplasmic
- Threonine--tRNA ligase, mitochondrial
- Tryptophan--tRNA ligase, cytoplasmic
- Leucine--tRNA ligase, cytoplasmic
- Asparagine--tRNA ligase, mitochondrial
Sequence:
MLSRSLNKVVTSIKSSSIIRMSSATAAATSAPTANAANALKASKAPKKGKLQVSLKTPKGTKDWADSDMVIREAIFSTLSGLFKKHGGVTIDTPVFELREILAGKYGEDSKLIYNLEDQGGELCSLRYDLTVPFARYVAMNNIQSIKRYHIAKVYRRDQPAMTKGRMREFYQCDFDVAGTFESMVPDSECLSILVEGLTSLGIKDFKIKLNHRKILDGIFQIAGVKDEDVRKISSAVDKLDKSPWEAVKKEMTEEKGQSEETADKIGEYVKLNGSLKEIHAVLSADANITSNEKAKQGLDDIATLMKYTEAFDIDSFISFDLSLARGLDYYTGLIYEVVTSASAPPENASELKKKAKSAEDASEFVGVGSIAAGGRYDNLVNMFSEASGKKSTQIPCVGISFGVERIFSLIKQRINSSTTIKPTATQVFVMAFGGGKDWTGYLPERMKVTKQLWDAGIEAEYVYKAKANPRKQFDAAEKAGCHIAVILGKEEYLEGKLRVKRLGQEFADDDGELVSAADIVPIVQEKLSQIHEDGLNEVTRLIKGL
Protein: ATP synthase subunit d, mitochondrial (Q86K89)
Organism: Dictyostelium discoideum (Social amoeba)
Interaction partners:
Sequence:
MFRYGLRVLSKAVDAKAAEAITAVPKGGYPAYLKPFLEGAEVLPPAPERSQFEKESDYINAVIAHPVIQKSPNALKIYNEFQESKRAMANYEPIPGESSEKVVINWDFYKKILPEDTVEFFRALEKKTHETILSWEAEDKKFIDFLLKKIKSDEEASKESQKSLYLTIQALEADRKQMEDFLTNLRTTTFEDLHGKYPEIDEQIYQEISNDEWMPKDLVGQETIYNKAKEAHHH
Protein: Uridine phosphorylase 1 (UPase 1) (UrdPase 1) (EC 2.4.2.3) (P52624)
Organism: Mus musculus (Mouse)
Function: Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1-phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis.
Interaction partners:
- Thymidine phosphorylase
- Cytidine deaminase
- Uridine 5'-monophosphate synthase
- Uridine-cytidine kinase-like 1
- Uridine-cytidine kinase 1
- Uridine-cytidine kinase 2
- Dihydropyrimidine dehydrogenase [NADP
- Uracil phosphoribosyltransferase homolog
- Thymidine kinase, cytosolic
- Purine nucleoside phosphorylase
Sequence:
MAATGTEAKDLENHHNDCFIQLSNPNIAAMKEDVLYHFNLSTSTHDFPAMFGDVKFVCVGGSSSRMNTFIKYVAAELGLDHPGKEYPNICAGTDRYAMYKAGPVLSVSHGMGIPSIGIMLHELIKMLYHARCSNITIIRIGTSGGIGLEPGSVVITQQAVNECFKPEFEQIVLGKRVIRNTNLDAQLVQELVQCSSDLNEFPMVVGNTMCTLDFYEGQGRLDGALCSYTEKDKQSYLRAAHAAGVRNIEMESSVFATMCSACGLKAAVVCVTLLDRLQGDQINTPHDVLVEYQQRPQRLVGHFIKKSLGRA
Protein: Ethylene-responsive transcription factor ERF116 (Q8GW17)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity).
Subcellular location: Nucleus {ECO:0000305}.
Interaction partners:
- Ethylene-responsive transcription factor ERF013
- Ethylene-responsive transcription factor ERF037
- Ethylene-responsive transcription factor ERF014
- Ethylene-responsive transcription factor ERF023
Sequence:
MKSFVKPERDSLLRTVRIVFTDPDATDDSSSSSDEWLPKPRKVKRFVHEITFLPQVSESSQDRSNAVKTPRRKSTRQFKYPVGVRPRPSGKFAAEILNPFTKTKKWLGTYETPAEAEKAYVDKKVEYDALASSGSAVSSSVVTVTSQCLRSPTSASVSCVSADDLSKEKTSLNKDVAASGDSTTKEVFTTFDFSDVKIPDLRFLAAEEDSMVSNANGAELDFDCFLTDSNILLDDYSLLENDINFSRFENSLPSELPDCDFTEMEFQLDDFKFAYTDHLTTPPLGLV
Protein: Type I inositol polyphosphate 5-phosphatase 2 (At5PTase2) (EC 3.1.3.56) (Q9FUR2)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Has phosphatase activity toward Ins(1,4,5)P3 and Ins(1,3,4,5)P4. Seems to be involved in the abscisic acid (ABA) signaling pathway. Could also be able to hydrolyze PtdIns(4,5)P2 and PtdIns(3,4,5)P3.
Interaction partners:
- Probable 3'
- Phosphoinositide phospholipase C 1
- Phosphoinositide phospholipase C 3
- Type I inositol polyphosphate 5-phosphatase 1
- 3'
- Probable 3'
- Multiple inositol polyphosphate phosphatase 1
- 3',5'-bisphosphate nucleotidase 2
- Inositol-tetrakisphosphate 1-kinase 2
- Inositol-tetrakisphosphate 1-kinase 1
Sequence:
MKTRRGKRPERFWPSIVMNKWLNRKPKVYDFSEDEIDTEPESEDDVCSVKDVPNVHCVTDEDSHNGRRGSEADHGNNISDGGVSVRGGYQRKHRRGKSETLRAQYINTKDIKVTVATWNVAGKRPSDDLEIEDWLSTDNPSDIYIIGFQEVVPLNAGNVFGAEDRGPIPKWESIIRRTLNKSNKESVYDQSPSCNNNALHRSHSAPSSPILAQEANSIISHVMVENLVADHSLDLATNEFIDAATALPSLEPQRNPNMDWPELALDSNPQIVGSEGKLRRVFSSNATLGFKLPENPSGASRFASEARQLKRSRSFETLNLSWNDIKEEIDNRSSSSSEAEEAAKIMHDDSSDGDSSSQDEEDGDKIRNSYGLPEDLVEECRKVKDSQKYVRIVSKQMVGIYVSVWIRRRLRRHVNNLKVSPVGVGLMGYMGNKGSVSISMTLYQSRMCFVCSHLTSGHKDGAEQRRNADVYEIIRRTRFASVLDTDQPRTIPCHDQVFWFGDLNYRLNMSDGEVRKLVSQKRWDELKNSDQLIRELRRGHVFDGWREGPIKFPPTYKYEFDSDRYAGENLREPEKKRAPAWCDRILWLGKGIRQECYKRSEIRMSDHRPVTSIFNVGVEVFDHRKLQRALHVNNAAASAVHPEPSF
Protein: 5'-AMP-activated protein kinase subunit beta (AMPK subunit beta) (P78789)
Organism: Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Function: Beta subunit of AMP-activated protein kinase (AMPK), which is required for transcriptional, metabolic, and developmental adaptations in response to glucose limitation. Has a structural role, mediating heterotrimer formation, and a regulatory role, defining carbon source-regulated subcellular location and substrate specificity of the AMPK kinase complex.
Subcellular location: Cytoplasm {ECO:0000269|PubMed:16823372}.
Interaction partners:
- 5'-AMP-activated protein kinase subunit gamma
- SNF1-like protein kinase ssp2
- Protein kinase domain-containing protein ppk9
- Protein sds23/moc1
- Probable Rho-GTPase-activating protein 6
- Protein kinase kin1
- Serine/threonine-protein kinase ppk25
- Serine/threonine-protein kinase ppk16
- Meiotically up-regulated gene 70 protein
- Uncharacterized transcriptional regulatory protein C3C7.04
Sequence:
MGNVQSQEGETRAHAVPSQDATTTPDNANNVPKEPRAQSMISIAADDLNQEGEMSDDNQQEGGNNRTSQNGTSGSSGHTKRRSQTSGKKTHQPYSGPCVPTIIRWRGGGEVVYVTGSFSRWKKKIQLLKSEDYTVLLQLRPGTQRFKFLVDGIWCCSSDFPTATDAEGNLYNYLEVEANEKLGASIDERLSQVHTDLPMEEKSESEQYSTEIPAFLTSNTLQELKLPKPPSLPPHLEKCILNSNTAYKEDQSVLPNPNHVLLNHLAAANTQLGVLALSATTRYHRKYVTTAMFKNFDV
Protein: Villin-like 1 (F4ILN8)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Interaction partners:
Sequence:
MSRLSKDIDSAFQGVGTKSGLEIWCVYNKQLISIPKSSFGKFHSGNAYLVLRTFLRKIESPQYDIHYWLGIDANEVDSILASDKALDLDAALGCCTVQYREVQGQETEKFLSYFKPCIIPVEGKYSPKTGIAGETYQVTLLRCKGDHVVRVKEVPFLRSSLNHDDVFILDTASKVFLFAGCNSSTQEKAKAMEVVEYIKDNKHDGRCEVATIEDGKFSGDSDAGEFWSFFGGYAPIPKLSSSTTQEQTQTPCAELFWIDTKGNLHPTGTSSLDKDMLEKNKCYMLDCHSEVFVWMGRNTSLTERKTSISSSEEFLRKEGRSTTTSLVLLTEGLENARFRSFFNKWPQTVESSLYNEGREKVAALFKQKGYDVEELPDEEDDPLYTNCRDNLKVWRVDGDDVSLLSIPDQTKLFTGDCYLVQYKYTYKERTEHLLYVWIGCESIQQDRADAITNASAIVGTTKGESVLCHIYQGNEPSRFFPMFQSLVVFKGGLSRRYKVLLAEKEKIGEEYNENKASLFRVVGTSPRNMQAIQVNLVATSLNSSYSYILQYGASAFTWIGKLSSDSDHEVLDRMLYFLDTSCQPIYIREGNETDTFWNLLGGKSEYPKEKEMRKQIEEPHLFTCSCSSGNDVLKVKEIYNFVQDDLTTEDVFLLDCQSEVYVWIGSNSNIKSKEEALTLGLKFLEMDILEEGLTMRTPVYVVTEGHEPPFFTRFFEWVPEKANMHGNSFERKLASLKGKKTSTKRSSGSQYRSQSKDNASRDLQSRSVSSNGSERGVSPCSSEKLLSLSSAEDMTNSSNSTPVVKKLFSESLLVDPNDGKVSYVNLFTERLGYMTHKYQKRVARQESSSKSDISKQKPRVGINSDLSSLESLAYSYEQLRVDSQKPVTDIDATRREAYLTEKEFEERFGMAKSEFYALPKWKQNKLKISLHLF
Protein: HAD superfamily Cof-like phosphohydrolase (Q9RS96)
Organism: Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / CCUG 27074 / LMG 4051 / NBRC 15346 / NCIMB 9279 / VKM B-1422 / R1)
Interaction partners:
Sequence:
MSDLPCPPTNAERLHEFHRAIGAATPERPTPPPPELLRLRQTLLDEESAEVRAEIDHLLARQAAGEALSAGDLAPLAHELADLLYVTYGALDQLGIDADAVFAEVHRANLSKASGPRRADGKQLKPEGWRPADVRGVIERLQHAPADD
Protein: DNA/RNA-binding protein KIN17 (Binding to curved DNA) (KIN, antigenic determinant of recA protein) (Q8K339)
Organism: Mus musculus (Mouse)
Function: Involved in DNA replication and the cellular response to DNA damage. May participate in DNA replication factories and create a bridge between DNA replication and repair mediated by high molecular weight complexes. May play a role in illegitimate recombination and regulation of gene expression. May participate in mRNA processing. Binds, in vitro, to double-stranded DNA. Also shown to bind preferentially to curved DNA in vitro and in vivo. Binds via its C-terminal domain to RNA in vitro.
Subcellular location: Nucleus {ECO:0000269|PubMed:15252136}. Cytoplasm {ECO:0000269|PubMed:15252136}. Note=During S phase, strongly associated with the nuclear matrix, and to chromosomal DNA in the presence of DNA damage. Also shows cytoplasmic localization in elongated spermatids. {ECO:0000250|UniProtKB:O60870, ECO:0000269|PubMed:15252136}.
Interaction partners:
- Methyltransferase-like protein 22
- Splicing factor 3A subunit 2
- Peptidyl-prolyl cis-trans isomerase NIMA-interacting 4
- Splicing factor 3A subunit 3
- RNA-binding motif protein, X-linked 2
- Histidine protein methyltransferase 1 homolog
- UTP--glucose-1-phosphate uridylyltransferase
- Splicing factor 3B subunit 3
- Protein-lysine N-methyltransferase EEF2KMT
- Splicing factor 3B subunit 1
Sequence:
MGKSDFLSPKAIANRIKSKGLQKLRWYCQMCQKQCRDENGFKCHCMSESHQRQLLLASENPQQFMDYFSEEFRNDFLELLRRRFGTKRVHNNIVYNEYISHREHIHMNATQWETLTDFTKWLGREGLCKVDETPKGWYIQYIDRDPETIRRQLELEKKKKQDLDDEEKTAKFIEEQVRRGLEGKEQETPVFTELSRENEEEKVTFNLNKGAGGSAGATTSKSSSLGPSALKLLGSAASGKRKESSQSSAQPAKKKKSALDEIMELEEEKKRTARTDAWLQPGIVVKIITKKLGEKYHKKKGVVKEVIDRYTAVVKMTDSGDRLKLDQTHLETVIPAPGKRVLVLNGGYRGNEGTLESINEKAFSATIVIETGPLKGRRVEGIQYEDISKLA
Protein: Ubiquitin carboxyl-terminal hydrolase cyk-3 (EC 3.4.19.12) (CeUBP130) (Cytokinesis defective protein 3) (Q8WT44)
Organism: Caenorhabditis elegans
Function: Ubiquitin-protein hydrolase which cleaves ubiquitin from ubiquitinated proteins. Plays a role in embryo osmoregulation. Probably by regulating osmosis, controls actin redistribution in the 1-cell embryos and thus actin-dependent processes such as cytokinesis and P-granules segregation. During the first embryonic mitotic division, involved in the formation of a functional microtubule organizing center provided by the male pronucleus.
Subcellular location: Nucleus {ECO:0000269|PubMed:11683918}. Cytoplasm {ECO:0000269|PubMed:11683918}. Cytoplasm, cytoskeleton, microtubule organizing center {ECO:0000269|PubMed:11683918}. Note=At the 2-cell stage embryo, localizes to the microtubule organizing center during mitotic metaphase. Localizes to the cytoplasm in germ cells and sperm, and to the nucleus in oocytes. {ECO:0000269|PubMed:11683918}.
Interaction partners:
- Ubiquitin carboxyl-terminal hydrolase
- OTU domain-containing protein
- ubiquitinyl hydrolase 1
- Helicase ATP-binding domain-containing protein
- Major facilitator superfamily
Sequence:
MGNTLTGRSNAIAPIISAEDAKTYISDEEYRRIRQAFQRFKNGCINYDEFCYHVLGGAQIPEEKRRLLFSFFSHGAETISFDNLLSSLVGLCRVEEVQSRFIEEYHEFASWGLSPPKLTIPLNDSYISFYEVMSYVTHLSVNEVIELEKVFATISDRAVCKLNEEKWKQALGGCFPDSYAERLFAVFDENRDGQIDFRELVCTLSALCRGPLPGRISQLARIWDVDCDKLLSDEELSNMYKDLNVPEEHQTVTKSSNGKSALVDFGIWAQENEKYVNEYYSMALQIGHICLGLRPESRKMELQIVNEFEKRASELPLSEWNIVASGWHAELRSFLEADKNPNPIDNSGIKGTREDSWTSKVACISAESARLKPDLIPSDYIRVPVPLWRAWLRWHGCALTVDSQFTRKYLDGEFFEDNKPALELYPLEILLLGHDRKKSQDGTENTPRSLTSWACAQVSRSMTVDELLALCKTELRLGDGDARLWQVVKENEEGNVLLDDGAQNLHQLYSSLGKTKKVNKMKLLLEVRERGTGVWPEELRASLSGKQITAASTLSSNAQLSDSSGRPGAVGLVNYGNFCYRNAGIQCLARVSPLTQYFLDEDNLDAIKRGNLRRGDAAETTIEYAKLLREMWAAKKKNIAPNDFNDAIRLSSDMFECSEQHDCQEFVAFLLDQLHTSMYESNKSLHPSPEESEGTDSNKLSDSSKKKEADKEEADEEKAERSWTEYEKQNESLVTQLFTGQLRSRLICRTCQSSSSVFEPFTSLSLPIGFEDVDLYQVIVVHRDGRIPRRYGFRLSRDSKVGNLREVVAVSSGISMSHLTIQCMSSKGTLMSRSPNHRSSNLRDELPLSSFPSGARLYALELPESTGEDQWRVAMHRKLQYNHEPYILGSTAGFIVSRFGLPLIVGLDEEVTGKKLYEDVMYQMHRFMEHSVNSSSSRAHDPCEDENSGYPFTLCLVDPNYEWCGQCPALRFCRGCPIRPDESKVFIPANCPIAVDWLPIALYLRYNHSQEQACEDDPSVAETWSRHFAPSSLEHCIEKFSCPETLDAAIQCDRCEKKTMRDKVMTIWKLPKYLIIHLKRFEFLREQGRMGKCKRTVNFPLKHFDPAPFVDKPDGNTYECIALANHYGQLSCGHFIAYAKSNEDKWLLLNDCSVREVSEEEVDKQGAYLLFYERKDVK
Protein: Homeobox protein Hox-B5 (Homeobox protein HHO.C10) (Homeobox protein Hox-2A) (Homeobox protein Hu-1) (P09067)
Organism: Homo sapiens (Human)
Function: Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis.
Subcellular location: Nucleus.
Interaction partners:
- Homeobox protein Hox-B6
- Homeobox protein Hox-B7
- Homeobox protein Hox-B4
- Homeobox protein Hox-C4
- Homeobox protein Hox-A5
- Homeobox protein Hox-B8
- Homeobox protein Hox-B9
- Homeobox protein Hox-B3
- Homeobox protein Hox-C6
- Homeobox protein Hox-A7
Sequence:
MSSYFVNSFSGRYPNGPDYQLLNYGSGSSLSGSYRDPAAMHTGSYGYNYNGMDLSVNRSSASSSHFGAVGESSRAFPAPAQEPRFRQAASSCSLSSPESLPCTNGDSHGAKPSASSPSDQATSASSSANFTEIDEASASSEPEEAASQLSSPSLARAQPEPMATSTAAPEGQTPQIFPWMRKLHISHDMTGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKDNKLKSMSLATAGSAFQP
Protein: Small ribosomal subunit protein bS6m (28S ribosomal protein S6, mitochondrial) (MRP-S6) (S6mt) (P58064)
Organism: Mus musculus (Mouse)
Subcellular location: Mitochondrion {ECO:0000250|UniProtKB:P82932}.
Interaction partners:
- Small ribosomal subunit protein uS9m
- Small ribosomal subunit protein bS16m
- Small ribosomal subunit protein uS12m
- Small ribosomal subunit protein uS14m
- Small ribosomal subunit protein uS15m
- Small ribosomal subunit protein uS5m
- Small ribosomal subunit protein uS10m
- Small ribosomal subunit protein uS11m
- Small ribosomal subunit protein uS2m
- Small ribosomal subunit protein uS7m
Sequence:
MPRYELALILKAMRRPETAAALKRTIESLMDRGAIVRNLESLGERALPYRISSHSQQHSRGGYFLVDFYAPTSAVENILEHLARDIDVVRPNIVKHPLTQEVKECDGIVPVPLEEKLYSTKRRKK
Protein: CUB domain-containing protein (Q3UEU3)
Organism: Mus musculus (Mouse)
Subcellular location: Membrane, coated pit {ECO:0000256|ARBA:ARBA00037878}. Membrane {ECO:0000256|ARBA:ARBA00004479}; Single-pass type I membrane protein {ECO:0000256|ARBA:ARBA00004479}.
Interaction partners:
Sequence:
MEKRAAAGPEGAPGARAPLAVVCLVNLFLTGRLSSAVPALGKAGATWGFGFQAATEPTGTQAACSGKLEQHTERRGVIYSPAWPLNYPPGTNCSWYIQGDRGDMITISFRNFDVEESHQCSLDWLLLGPAAPPRQEAFRLCGSAIPPAFISARDHVWIFFHSDASSSGQAQGFRLSYIRGKLGQTSCQTDEFRCDNGKCLPGPWQCNMVDECGDGSDEGNCSAPASEPPGSLCPGGTFPCSGARSTRCLPVERRCDGTQDCGDGSDEAGCPDLACGRRLGSFYGSFASPDLFGAARGPSDLHCTWLVDTQDPRRVLLQLELRLGYDDYVQVYEGLGERGDRLLQTLSYRSNHRPVSLEAAQGRLTVAYHARARSAGHGFNATYQVKGYCLPWEQPCGSSEGDDDSTGEQGCFSEPQRCDGWWHCASGRDEQGCPACPPDQYPCEGGSGLCYAPADRCNNQKSCPDGADEKNCFSCQPGTFHCGTNLCIFETWRCDGQEDCQDGSDEHGCLAAVPRKVITAALIGSLVCGLLLVIALGCAFKLYSLRTQEYRAFETQMTRLEAEFVRREAPPSYGQLIAQGLIPPVEDFPVYSASQNTPRKKMGTPVRIMMMPTPQTMGSEMKLKTSRNAQNTKYTTGD
Protein: ELAV-like protein (A0A2R8S0A2)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Interaction partners:
- RNA-binding protein 44
Sequence:
MAVRLCDVASLLRSGSWAAEPWTGQVIAAMETQLSNGPSCTSSNGPNSVSNTCTSPVEMPNGSEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYMEPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQFGRIITSRILVDQVTGVSRGVGFIRFDRRVEAEEAIKGLNGQKPPGATEPITVKFANNPSQKSSQALLSHLYQSPNRRYPGPLAQQAQRFRLDNLLNMAYGVKSRFSPMTIDGVTSLAGINLPAHAGTGWCIFVYNLAPDADENVLWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAVAIASLNGYRLGDRVLQVSFKTNKTHKA
Protein: Lid2 complex component lid2 (Lid2C component lid2) (Q9HDV4)
Organism: Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Subcellular location: Nucleus {ECO:0000305}.
Interaction partners:
- Lid2 complex component jmj3
- Set1 complex component ash2
- ATP synthase subunit gamma, mitochondrial
- ATP synthase subunit alpha
- ATP synthase subunit a
- ATP synthase subunit delta, mitochondrial
- ATP synthase subunit 5, mitochondrial
- Set1 complex component sdc1
- Lid2 complex component snt2
- ATP synthase subunit d
Sequence:
MICQLLWHEHNSMGSGREKKIRKLGDNFSLPYLKFDCDHNDKNYRASNRPFGLSTGLSVQLNASNMTDPFKFLLDNWHTIFKNGAIKLLPPEGWQIPVVLDQGAFEFQSKRQCLNKGCLNYEKNYDYFKKLKAFHESRGLYFYHPPIIGNRPVDFLRLRNAISKFTNSGSSLNNEILHKVIIYLRLEDTKEVRQVLTRCYDRYIKPFERDSSPSFKSKRSESSTRKIRNTRSSAQQESPIPETSAQSPVQTIQVNGSTSLKRPLIERGEQCEYCGLDKNPETILLCDGCEAAYHTSCLDPPLTSIPKEDWYCDACKFNISDYDPRKGFKWKLSSLKERSAEIFNTLGERNSSSKLTNLTEDDIELFYWSSLAESNSGFAPLELEGLSQAYTSTIQSSLPSKEVFPLEKYSSEPWNLHNLPFENPCLFNYSFSDLSSLTITRLSIGMVFYTHGWTKSSLSTGLLHHHRFGDTVTWYVLPPDESDAFERYLISSYPQYTMEDLNRSNGLPVIVSPSSLIENGFHPIAIDLRPNEFLVVSPNSYHMGFHQGFSSFESVNFATVNWIKDGLLNSSISVLKSMRIPSSVSYEAVIISMVLSKNPCFSSEWLIKCFEDMIANESASKNEIMKLVPNIQALKLESSVPLEIRCSNCKQPCFLSFMQCHEPKKFICLGDCVKEVSLNATSWMLFYRWDVHELSNLAERFVSLIRGPEEWTNRLRSVLSTSPKPQLKVLKSLLVDAEKAMLTTPETVNLRDFVQNANSWIDSVNECLKVASLKRKKDKKPPLFKAHDHWNNTSNLKDSAVLFKVLQTSRSMAFTCQEIENMKQKAFDLLEFRNRLINSFSGPLDKNTCQRLLTEAELLGFTIPELGIIQKYLIQFEWLDMFYSFETTRTTDSDLERLITYGVSAGIPEDNDYMIFAKAMKGRAEIWENQVYDTLSKSNISYDKLSLLRDEAMNLCVNKELFSKVVGILNNAEEIKNKIATLCERSQEKDFALRPSIDEVKEALASAEKLPILSESTVTLQKMYDVVLEWIRRGKRLFGKANAPLEILGQHLDYVEKRNSASLSLNDRPGPPMEPASRETSPDSEGRLTIRKKKGCIFCFCRLPESGVMIECEICHEWYHAKCLKMSKKKLRQDEKFTCPICDYRVEIPRLSNRPKLEDLQSLYKDVKLLPFQPKETETLRKVVDLASKFRQEMQALAHNPFGLTMAEVPLARFYLRKMEGAEILLVDETNLFRQKLHECVPIAPNPPPIIGESKSTRKPRPTKRQRQIMKQVAEGLLPASAIAPPKSSNEKKSSNNVKAVEAETKSKSEKSPKKNGTNISDANNKNESHVSLMKNWKLGSPAFVTLVKEKNSSCLCGEEFSPRDSFIDCTICERRFHYDCVGLNNEIADSVSKFTCPICMEQSGGIYPWQLRPRNGMHPDHISGFSKEVETDPKLGSSGYTLNNSKFDKAAVSKTLSAQDVSRLQKVSCGEHLYFGTDVFTPLGDMATSASMFSLDDSSEKTDAFTENFLNV
Protein: Tail knob protein gp9 (Distal tube protein) (Gene product 9) (gp9) (Protein p9) (P04331)
Organism: Bacillus phage phi29 (Bacteriophage phi-29)
Function: Distal (knob) tail protein that plugs the end of the tube before DNA ejection and forms a channel perforating the host membrane during ejection.
Subcellular location: Virion {ECO:0000269|PubMed:11562162, ECO:0000269|PubMed:27309813, ECO:0000269|PubMed:8985375}. Note=Present in 6 copies in the virion (PubMed:27309813). Located at the tip of the tail and constitutes most of the tail knob (PubMed:18606992, PubMed:27309813). {ECO:0000269|PubMed:11562162, ECO:0000269|PubMed:18606992, ECO:0000269|PubMed:27309813}.
Interaction partners:
Sequence:
MAYVPLSGTNVRILADVPFSNDYKNTRWFTSSSNQYNWFNRKSRVYEMSKVTFMGFRENKPYVSVSLPIDKLYSASYIMFQNADYGNKWFYAFVTELEFKNSAVTYVHFEIDVLQTWMFDMKFQESFIVREHVKLWNDDGTPTINTIDEGLSYGSEYDIVSVENHKPYDDMMFLVIISKSIMHGTPGEEESRLNDINASLNGMPQPLCYYIHPFYKDGKVPKTYIGDNNANLSPIVNMLTNIFSQKSAVNDIVNMYVTDYIGLKLDYKNGDKELKLDKDMFEQAGIADDKHGNVDTIFVKKIPDYEALEIDTGDKWGGFTKDQESKLMMYPYCVTEITDFKGNHMNLKTEYINNSKLKIQVRGSLGVSNKVAYSVQDYNADSALSGGNRLTASLDSSLINNNPNDIAILNDYLSAYLQGNKNSLENQKSSILFNGIMGMIGGGISAGASAAGGSALGMASSVTGMTSTAGNAVLQMQAMQAKQADIANIPPQLTKMGGNTAFDYGNGYRGVYVIKKQLKAEYRRSLSSFFHKYGYKINRVKKPNLRTRKAFNYVQTKDCFISGDINNNDLQEIRTIFDNGITLWHTDNIGNYSVENELR
Protein: Malate dehydrogenase, mitochondrial (EC 1.1.1.37) (P40926)
Organism: Homo sapiens (Human)
Subcellular location: Mitochondrion matrix {ECO:0000250|UniProtKB:P04636}.
Interaction partners:
- Aspartate aminotransferase, mitochondrial
- Citrate synthase, mitochondrial
- Fumarate hydratase, mitochondrial
- Aspartate aminotransferase, cytoplasmic
- Pyruvate carboxylase, mitochondrial
- Isocitrate dehydrogenase, mitochondrial
- NADP-dependent malic enzyme, mitochondrial
- ATP-citrate synthase
- NADP-dependent malic enzyme
- Putative aspartate aminotransferase, cytoplasmic 2
Sequence:
MLSALARPASAALRRSFSTSAQNNAKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETKAAVKGYLGPEQLPDCLKGCDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPEAMICVIANPVNSTIPITAEVFKKHGVYNPNKIFGVTTLDIVRANTFVAELKGLDPARVNVPVIGGHAGKTIIPLISQCTPKVDFPQDQLTALTGRIQEAGTEVVKAKAGAGSATLSMAYAGARFVFSLVDAMNGKEGVVECSFVKSQETECTYFSTPLLLGKKGIEKNLGIGKVSSFEEKMISDAIPELKASIKKGEDFVKTLK
Protein: Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B (F4I9M3)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Interaction partners:
Sequence:
MNQNIEEIKFILLIVCLLVPSAATLLGVSKRIFQETALQLNCYQWMDNNAKNLCFVFSFNAQESKKTELSYPKERSVCESERARDREREREMNGGDEVVAASADPSLPLEWRFSQVFGERSAGEEVQEVDIISAIEFDNSGNHLATGDRGGRVVLFERTDTNNSSGTRRELEEADYPLRHPEFRYKTEFQSHDPEFDYLKSLEIEEKINKIRWCQTANGALFLLSTNDKTIKFWKVQDKKIKKICDMNSDPSRTVGNGTVASSSNSNITNSCLVNGGVSEVNNSLCNDFSLPAGGISSLRLPVVTSHESSPVARCRRVYAHAHDYHINSISNNSDGETFISADDLRINLWNLEISNQSFNIVDVKPAKMEDLSEVITSAEFHPTHCNMLAYSSSKGSIRLIDLRQSALCDSHSKLFEEPEQAGPKSFFTEIIASVSDIKFAKEGRYLLSRDYMTLKLWDINMDAGPVATFQVHEYLKPKLCDLYENDSIFDKFECCISGNGLRAATGSYSNLFRVFGVAPGSTETATLEASRNPMRRHVPIPSRPSRALSSITRVVSRGSESPGVDGNTNALDYTTKLLHLAWHPNENSIACAAANSLYMYYA
Protein: Arf family GTPase (Q5AMP3)
Organism: Candida albicans (strain SC5314 / ATCC MYA-2876) (Yeast)
Interaction partners:
- Arf family guanine nucleotide exchange factor
- Rga2p
- Rab family GTPase
- GRIP domain-containing protein
- Age2p
- Oxidant-induced cell-cycle arrest protein 5
- Lrg1p
- non-specific serine/threonine protein kinase
- ADP-ribosylation factor GTPase-activating protein
- Arf family guanine nucleotide exchange factor
Sequence:
MGQAFSFGNIFSKLWGTNKEIRILILGLDGAGKTTILYRLQMGEVVTTKPTIGFNVETLKYKNITLNIWDLGGQTSIRPYWRCYYSNTSAVIFVVDSTDKDRIDTACKELHQMLKEEELQDSALLVFANKQDQPGAMTAAEVSQALSLTDLKDRSWSIVASSAIKGEGLTEGLDWLMDVIKDEQL