wanglab/gogpt-training-data huggingface dataset:
Protein: Pcdhgb7 protein (Q6NXY6)
Organism: Mus musculus (Mouse)
Subcellular location: Cell membrane {ECO:0000256|ARBA:ARBA00004251}; Single-pass type I membrane protein {ECO:0000256|ARBA:ARBA00004251}.
Interaction partners:
Sequence:
MGGSSARRKRPGRPQVLFILLLPLFCPALGQPVRYSIPEELDRGSVVGKLAKDLGLSVLEVSARKLRVSAEKLHFSVDSESGDLLVKDRIDREQICKGRRKCELQLEAVLENPLNIFHVVVEIEDVNDHAPQFPKDEINLEISESVSPGARTILESANDPDIDVNSLSKYQLSPNEYFSLLVKDNPDGGKYPELELQKMLDREAESTHHLVLTAVDGGDPPRTGTAQLRIRVVDANDNPPVFSQDLYRVRLPEDLPPGTTVLRLKAMDQDEGINAEFTYSFLGVANKGQHEFSLNPLTGDIVTLQSLDFEEVERYTIGVEAKDRGSLSSQCKVIIEVLDENDNRPEIIITSLSDQISEDSPSGTVVALFKVRDRDSGENAEVMCSLSGNNPFKIHSSSNNYYKLVTDSILDREQTPGYNVTITATDRGKPPLSSSTTITLNVADVNDNAPVFQQQAYLINVAENNQPGTSITQVKAWDPDVGSNGLVSYSIIASDLEPKALSSFVSVNQDSGVVYAQRAFDHEQIRSFQLTLQARDQGSPALSANVSMRVLVGDRNDNAPRVLYPTLEPDGSALFDMVPRAAEPGYLVTKVVAVDADSGHNAWLSYHVLQASDPGLFSLGLRTGEVRTARALSDKDAARQRLLVAVRDGGQPPLSATATLLLVFADSLQEALPDLVDHPIPSDPQSELQFYLVVALALISVLFLLAVIFAIALRLRQSSSPSSTGCFGSVLGSKSRPVLPPNYSEGTLPYAYNLCVPGDQLKPEFNYFTSVGDCPAAQDILNKDSSSALLASILTPGVEADEKTFNQQAPPNTDWRFSQAQRPGTSGSQNGDETGTWPNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK
Protein: IQ domain-containing protein N (Q9H0B3)
Organism: Homo sapiens (Human)
Interaction partners:
Sequence:
MTLQGRADLSGNQGNAAGRLATVHEPVVTQWAVHPPAPAHPSLLDKMEKAPPQPQHEGLKSKEHLPQQPAEGKTASRRVPRLRAVVESQAFKNILVDEMDMMHARAATLIQANWRGYWLRQKLISQMMAAKAIQEAWRRFNKRHILHSSKSLVKKTRAEEGDIPYHAPQQVRFQHPEENRLLSPPIMVNKETQFPSCDNLVLCRPQSSPLLQPPAAQGTPEPCVQGPHAARVRGLAFLPHQTVTIRFPCPVSLDAKCQPCLLTRTIRSTCLVHIEGDSVKTKRVSARTNKARAPETPLSRRYDQAVTRPSRAQTQGPVKAETPKAPFQICPGPMITKTLLQTYPVVSVTLPQTYPASTMTTTPPKTSPVPKVTIIKTPAQMYPGPTVTKTAPHTCPMPTMTKIQVHPTASRTGTPRQTCPATITAKNRPQVSLLASIMKSLPQVCPGPAMAKTPPQMHPVTTPAKNPLQTCLSATMSKTSSQRSPVGVTKPSPQTRLPAMITKTPAQLRSVATILKTLCLASPTVANVKAPPQVAVAAGTPNTSGSIHENPPKAKATVNVKQAAKVVKASSPSYLAEGKIRCLAQPHPGTGVPRAAAELPLEAEKIKTGTQKQAKTDMAFKTSVAVEMAGAPSWTKVAEEGDKPPHVYVPVDMAVTLPRGQLAAPLTNASSQRHPPCLSQRPLAAPLTKASSQGHLPTELTKTPSLAHLDTCLSKMHSQTHLATGAVKVQSQAPLATCLTKTQSRGQPITDITTCLIPAHQAADLSSNTHSQVLLTGSKVSNHACQRLGGLSAPPWAKPEDRQTQPQPHGHVPGKTTQGGPCPAACEVQGMLVPPMAPTGHSTCNVESWGDNGATRAQPSMPGQAVPCQEDTGPADAGVVGGQSWNRAWEPARGAASWDTWRNKAVVPPRRSGEPMVSMQAAEEIRILAVITIQAGVRGYLARRRIRLWHRGAMVIQATWRGYRVRRNLAHLCRATTTIQSAWRGYSTRRDQARHWQMLHPVTWVELGSRAGVMSDRSWFQDGRARTVSDHRCFQSCQAHACSVCHSLSSRIGSPPSVVMLVGSSPRTCHTCGRTQPTRVVQGMGQGTEGPGAVSWASAYQLAALSPRQPHRQDKAATAIQSAWRGFKIRQQMRQQQMAAKIVQATWRGHHTRSCLKNTEALLGPADPSASSRHMHWPGI
Protein: HECT-type E3 ubiquitin transferase (EC 2.3.2.26) (D7NIW0)
Organism: Rattus norvegicus (Rat)
Interaction partners:
Sequence:
MSESPERRGESRILRVKVVSGIDLAKKDIFGASDPYVKLSLYVADENRELALVQTKTIKKTLNPKWNEEFYFRVNPSNHRLLFEVFDENRLTRDDFLGQVDVPLSHLPTEDPTMERPYTFKDFLLRPRSHKSRVKGFLRLKMAYMPKNGGQDEENSEQRDDMEHGWEVVDSNDSASQHQEELPPPPLPPGWEEKVDNLGRTYYVNHNNRSTQWHRPSLMDVSSESDNNIRQINQEAAHRRFRSRRHISEDLEPEASEGGGEGPEPWETISEEVNMAGDSLSLALPPPPASPVSRTSPQELSEELSRRLQITPDSNGEQFSALIQREPSSRLRSCSVTDTVAEQAHLPPPSTPTRRARSSTVTGGEESTPSVAYVHTTPGLPSGWEERKDAKGRTYYVNHNNRTTTWTRPIMQLAEDGASGSATNSNNHLVEPQIRRPRSLSSPTVTLSAPLEGAKDSPIRRAVKDTLSNPQSPQPSPYNSPKPQHKVTQSFLPPGWEMRIAPNGRPFFIDHNTKTTTWEDPRLKFPVHMRSKASLNPNDLGPLPPGWEERIHLDGRTFYIDHNSKITQWEDPRLQNPAITGPAVPYSREFKQKYDYFRKKLKKPADIPNRFEMKLHRNNIFEESYRRIMSVKRPDVLKARLWIEFESEKGLDYGGVAREWFFLLSKEMFNPYYGLFEYSATDNYTLQINPNSGLCNEDHLSYFTFIGRVAGLAVFHGKLLDGFFIRPFYKMMLGKQITLNDMESVDSEYYNSLKWILENDPTELDLMFCIDEENFGQTYQVDLKPNGSEIMVTNENKREYIDLVIQWRFVNRVQKQMNAFLEGFTELLPIDLIKIFDENELELLMCGLGDVDVNDWRQHSIYKNGYCPNHPVIQWFWKAVLLMDAEKRIRLLQFVTGTSRVPMNGFAELYGSNGPQLFTIEQWGSPEKLPRAHTCFNRLDLPPYETFEDLREKLLMAVENAQGFEGVD
Protein: Argininosuccinate synthase (EC 6.3.4.5) (Citrulline--aspartate ligase) (P16460)
Organism: Mus musculus (Mouse)
Function: One of the enzymes of the urea cycle, the metabolic pathway transforming neurotoxic amonia produced by protein catabolism into inocuous urea in the liver of ureotelic animals. Catalyzes the formation of arginosuccinate from aspartate, citrulline and ATP and together with ASL it is responsible for the biosynthesis of arginine in most body tissues.
Subcellular location: Cytoplasm, cytosol {ECO:0000250|UniProtKB:P00966}.
Interaction partners:
- Argininosuccinate lyase
- Ornithine transcarbamylase, mitochondrial
- Carbamoyl-phosphate synthase, mitochondrial
- Multifunctional protein CAD
- N-acetylglutamate synthase, mitochondrial
- Ornithine aminotransferase, mitochondrial
- Asparagine synthetase
- Adenylosuccinate synthetase isozyme 2
- Adenylosuccinate synthetase isozyme 1
- Aspartate aminotransferase, cytoplasmic
Sequence:
MSSKGSVVLAYSGGLDTSCILVWLKEQGYDVIAYLANIGQKEDFEEARKKALKLGAKKVFIEDVSKEFVEEFIWPAVQSSALYEDRYLLGTSLARPCIARRQVEIAQREGAKYVSHGATGKGNDQVRFELTCYSLAPQIKVIAPWRMPEFYNRFKGRNDLMEYAKQHGIPIPVTPKSPWSMDENLMHISYEAGILENPKNQAPPGLYTKTQDPAKAPNSPDVLEIEFKKGVPVKVTNIKDGTTRTTSLELFMYLNEVAGKHGVGRIDIVENRFIGMKSRGIYETPAGTILYHAHLDIEAFTMDREVRKIKQGLGLKFAELVYTGFWHSPECEFVRHCIQKSQERVEGKVQVSVFKGQVYILGRESPLSLYNEELVSMNVQGDYEPIDATGFININSLRLKEYHRLQSKVTAK
Protein: GEO04448p1 (GH25462p) (Q8MRL1)
Organism: Drosophila melanogaster (Fruit fly)
Interaction partners:
Sequence:
MDITVPPPDSHWSLRFVDIVKPFPKHTLANATYKIIRFFYPPFALETVDVTHVVSDPELNSLNVGLFVVVPLILACIGYGVYKYVRSMHTVAKRTPLKLYELEQRMKDKYGPEYKQGIWKRKDISDPLLLTTDPSEPKAKRCESSNAHWLRKTDRSDD
Protein: DUF724 domain-containing protein 8 (AtDUF8) (F4KEA4)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: May be involved in the polar growth of plant cells via transportation of RNAs.
Subcellular location: Nucleus {ECO:0000269|PubMed:19795213}.
Interaction partners:
Sequence:
MFSPGTMVEVSSKINEGEVVWVPSMVIKEFKEDDEYKYIVKDKSFSCEGKKARPNKTVDLSSLRPIPVSVDEYQLEENVEVFLDGMGWRHGRVMGSQERAIGTLSQKWYFVRLESTKKQLTFKQSDLRPLKVWEDGVWKVLQTRELSFTQGSGDKTGDSVRNANESDPPLTPPPGIITPPLKQIEAGTQRKALSKKTLPRNQNGSGNDSTLENENSEDNNRKRKREENLGCVASVEQDKPKDTTMVLPFEKKLRIWETLESMEVFKTVPQSPHFSPLLVESREDSREMSAVGMMLTFFGLLDEVKALQHNDPISFFISLTNSFAELEKHGFNVKAPQSRINKLLSLRDRQSKKTEELKDAEKVTAEKESVKAENKRKILELQRLNEEMDKEIAQSKSCAAKIVQQLDDVKLEFLATASAPW
Protein: Claudin b (Cldnb protein) (Q90XR8)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Subcellular location: Cell junction, tight junction {ECO:0000256|ARBA:ARBA00004435}. Cell membrane {ECO:0000256|ARBA:ARBA00004651}; Multi-pass membrane protein {ECO:0000256|ARBA:ARBA00004651}.
Interaction partners:
- Claudin-7-B
- Tight junction protein 1a
- Claudin
- Claudin a.
- Claudin
- Uncharacterized protein LOC550497
- Claudin
- Tight junction protein 3
- Claudin
- Epithelial cell adhesion molecule.
Sequence:
MASTGLQMLGIALAIFGWIGVIVLCALPMWKVTAFIGANIVTSQTSWEGIWMSCVVQSTGQMQCKVYDSMLALSSDIQAARALTVISIVIGVMGIMLSMAGGKCTNCIEEESSKAKVGITAGVIFIISGVLCLVPVCWTANAIIQDFYNPLVVQAQKREIGASLYIGWGASALLIIGGSLLCCHCPEKSDSGKYTAKYNATPRSEASAPSGKNFV
Protein: Myosin-binding protein H (MyBP-H) (86 kDa protein) (H-protein) (Q05623)
Organism: Gallus gallus (Chicken)
Function: Binds to myosin; probably involved in interaction with thick myofilaments in the A-band.
Interaction partners:
- PDZ domain-containing protein.
- Protein kinase domain-containing protein
- Uncharacterized protein.
Sequence:
MTGKTAPAAAKKAPAAKKAPAPASKKAPEPAPKEKPAPTPKEGHAPTPKEEHAPPPKEEHAPPPKEEHAPAPAAETPPAPEHPPDAEQPAAPAAEHAPTPTHEAAPAHEEGPPPAAPAEAPAPEPEPEKPKEEPPSVPLSLAVEEVTENSVTLTWKAPEHTGKSSLDGYVVEICKDGSTDWTAVNKEPFLSTRYKIHDLASGEKVHVRVKAISASGTSDPATLEQPVLIREITDLPRIRLPRQLRQVYVRHVGEAVNLLIPFQGKPQPQVTWTKDNQPLDTSRVNIRNTDKDTIFFIRTAQRSDSGKYQLSVRINGAEDKAILDIRVIERPGPPQNLKLVDVWGFNVALEWSPPADNGNSEIKGYTVQKSDKKSGKWFTVLERCTRTSCTISDLIIGNTYSFRVFSENACGMSETAAVAAGVAHIKKTVYQPQKIPERDMMEPPKFTQPLTDRATTRGYSTHLFCSVRGFPQPKIIWMKNKMEIREDPKYIAMIEQGVCSLEIRKPSPFDAGVYTCKAVNPLGEASVDCKLDVKMPK
Protein: Pre-mRNA splicing factor SR-like 1 (AtSRL1) (Q8RWB1)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: May be required for pre-mRNA splicing (Probable). Confers salt tolerance to LiCl and NaCl.
Subcellular location: Nucleus {ECO:0000255|PROSITE-ProRule:PRU00768}.
Interaction partners:
- Pre-mRNA-splicing factor 38
- Glutamate receptor 3.1
- RNA-binding motif protein 25
- Protein-protein interaction regulator family protein
- Cellulose synthase-like protein D4
- Peptidyl-prolyl cis-trans isomerase CYP18-4
Sequence:
MAEIQSNGRAYESLLEKVLSMNILSSDYFKELYGLKTYHEVIDEIYNQVNHVEPWMGGNCRGPSTAYCLLYKFFTMKLTVKQMHGLLKHTDSPYIRAVGFLYLRYVADAKTLWTWYEPYIKDDEEFSPGSNGRMTTMGVYVRDLLLGLYYFDTLFPRIPVPVMRQIVSNLEKMNLPTKPSGSTGDMTRGSEDTARRPPSVKASLSVSFGQRAPHRASTRGSSPVRRPPPTGYDRNGGDEVQQRSPRRSQSRDYYSDRDSDRQREREREKDRERERGRDRYRERERDYGNDRRSRRDYDSRSRRNDYEDDRSRHDRRSRSRSRSRSRSVQIEREPTPKRDSSNKEKSAVTVNSNLAKLKDLYGDASSQKRDEGFGTRKDSSSEEVIKLGGSSWR
Protein: Ferredoxin (P83582)
Organism: Solanum nigrum (Black nightshade)
Function: Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.
Subcellular location: Plastid, chloroplast {ECO:0000269|PubMed:12620316}.
Interaction partners:
Sequence:
ATYKVKLVTPDGPIEFDCPDDVYILDQAEEEGHELPYSCRAGSCSSCAGKVTAGTVDQSDGNFLDDDQMADGFVLTCVAYPKSDVTIETHKEEDLTG
Protein: Kinesin-like protein KIP2 (P28743)
Organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Function: Required for assembly of the mitotic spindle.
Subcellular location: Cytoplasm, cytoskeleton {ECO:0000305}.
Interaction partners:
- Nuclear fusion protein BIK1
- Protein BIM1
- Kinesin-like protein KIP3
- Kinesin-like protein KIP1
- Karyogamy protein KAR9
- Dynein heavy chain, cytoplasmic
- Anaphase spindle elongation protein
- Kinesin-like protein CIN8
- Spindle pole body-associated protein VIK1
- Spindle pole body-associated protein CIK1
Sequence:
MIQKMSPSLRRPSTRSSSGSSNIPQSPSVRSTSSFSNLTRNSIRSTSNSGSQSISASSTRSNSPLRSVSAKSDPFLHPGRIRIRRSDSINNNSRKNDTYTGSITVTIRPKPRSVGTSRDHVGLKSPRYSQPRSNSHHGSNTFVRDPWFITNDKTIVHEEIGEFKFDHVFASHCTNLEVYERTSKPMIDKLLMGFNATIFAYGMTGSGKTFTMSGNEQELGLIPLSVSYLFTNIMEQSMNGDKKFDVIISYLEIYNERIYDLLESGLEESGSRISTPSRLYMSKSNSNGLGVELKIRDDSQYGVKVIGLTERRCESSEELLRWIAVGDKSRKIGETDYNARSSRSHAIVLIRLTSTNVKNGTSRSSTLSLCDLAGSERATGQQERRKEGSFINKSLLALGTVISKLSADKMNSVGSNIPSPSASGSSSSSGNATNNGTSPSNHIPYRDSKLTRLLQPALSGDSIVTTICTVDTRNDAAAETMNTLRFASRAKNVALHVSKKSIISNGNNDGDKDRTIELLRRQLEEQRRMISELKNRSNIGEPLTKSSNESTYKDIKATGNDGDPNLALMRAENRVLKYKLENCEKLLDKDVVDLQDSEIMEIVEMLPFEVGTLLETKFQGLESQIRQYRKYTQKLEDKIMALEKSGHTAMSLTGCDGTEVIELQKMLERKDKMIEALQSAKRLRDRALKPLINTQQSPHPVVDNDK
Protein: Single-stranded DNA-binding protein 3 (Sequence-specific single-stranded-DNA-binding protein) (Q9R050)
Organism: Rattus norvegicus (Rat)
Function: May be involved in transcription regulation of the alpha 2(I) collagen gene where it binds to the single-stranded polypyrimidine sequences in the promoter region.
Subcellular location: Nucleus {ECO:0000250}.
Interaction partners:
- LIM domain binding 1
- LIM domain binding 2
Sequence:
MFAKGKGSAVPSDGQAREKLALYVYEYLLHVGAQKSAQTFLSEIRWEKNITLGEPPGFLHSWWCVFWDLYCAAPERRDTCEHSSEAKAFHDYSAAAAPSPVLGNIPPNDGMPGGPIPPGFFQPFMSPRYAGGPRPPIRMGNQPPGGVPGTQPLMPNSMDPTRQQGHPNMGGSMQRMNPPRGMGPMGPGPQNYGSGMRPPPNSLGPAMPGINMGPGAGRPWPNPNSANSIPYSSSSPGTYVGPPGGGGPPGTPIMPSPADSTNSSDNIYTMINPVPPGGSRSNFPMGPGSDGPMGGMGGMEPHHMNGSLGSGDINGLPKNSPNNISGISNPPGTPRDDGELGGNFLHSFQNDNYSPSMTMSV
Protein: Uncharacterized protein (Q38AW1)
Organism: Trypanosoma brucei brucei (strain 927/4 GUTat10.1)
Interaction partners:
Sequence:
MDHPPAGPFGGGECRCTGIRFCQHCIDSDRAQSIVRRHVSLANASDVVLRQYTDQRMSSCSFACVGPSLLSMCCACRTVFETAGGVLKCCGDHKGFIARTDIELSGLTIQPGFVSPNEEEYLVAFFDNPAPFAAWKVSQSGRRKQEYGPKANFKKRKLKVGDFRALPHQMKTTLDRVRSFVAEQTMREYCIVEVSVLEYTAECSCLDPHIDDTWLWGDRIGGLNLLDDVTLTFVSADEVAVTVFVPRGAFFLLTGVSRYEWMHGIRREDVKNRRVSVTFREFADNLVVDQEILKTIVMSATTFI
Protein: ABC-type glutathione-S-conjugate transporter (EC 7.6.2.3) (Q7KTD0)
Organism: Drosophila melanogaster (Fruit fly)
Subcellular location: Cell membrane {ECO:0000256|ARBA:ARBA00004651}; Multi-pass membrane protein {ECO:0000256|ARBA:ARBA00004651}. Vacuole membrane {ECO:0000256|ARBA:ARBA00004128}; Multi-pass membrane protein {ECO:0000256|ARBA:ARBA00004128}.
Interaction partners:
Sequence:
MADDTSSPMDRFCGSTFWNATETWYTNDPDFTPCFEQTALVWTPCAFYWAFVIFDFYYLKASLDRNIPWNKLNVSKALVNLGLLVITALDLIMALVKKGGDSELPLYDLDVWGPIIKFATFLLLFIFIPLNRKYGVQTTGCQFIFWFLLTVLSIPRCRTEVRLDAERQKILNSQQPSEQDFSWEEYQFVSFFIFFTFTSIMLILNCFADGMPRQTKYQRGENEIPELSASFLSRITYQWFDKMALKGYRNPLEEKDLWDLRPQDSCSEVMPIFAHHWNQNVRKNYKNKARVEPKAQFSNGNVTFENPHGEKNGRKKGMASIMPPIYKSFGGVFLFGALMKLFTDTLTFAQPQVLSLIISFVEAQDAEPEWKGILYAVLLFVLAAAQTFILGQYFHRMFIVGLRIRTALINAIYRKALRISNSTKKESTVGEIVNLMAVDAQRFMELTTYLNMIWSAPLQIGLALYFLWQQLGPSVLAGLAVMIILIPVNGVIASRIKTYQIRQMKYKDERVKLMNEVLSGIKVLKLYAWEPSFEKQVLDIRDKEIATLRSTAYLNAGTSFLWSCAPFLVSLVTFATYVLTSEANQLSVEKVLVSIALFDLMKLPLTILPMLSVDIAETQVSVNRINKFLNSEELDPNSVLHDSSKPHPMSIENGEFSWGDEITLRNINIEVKKGSLVALVGTVGSGKSSVVQAFLGEMEKLAGVVNTVGKLAYVPQQAWIQNATVRDNILFGQTYDRKRYNKVIDACALRADIDILSAGDLTEIGEKGINLSGGQKQRISLARAVYSDADLYLLDDPLSAVDAHVGKHIFEEVIGPKGILARKSRVLVTHGVTFLPQVDSIYVIKMGEISESGTFDQLVKNKGAFADFIIQHLQEGNEEEEELNQIKRQISSTADVPELLGTVEKAIKLARTESLSDSISVTSADSLMGGGGSLRRRTKRQDSHDSVASAASLKKKQEVEGKLIETEKSQTGGVEFAVYKHYIKSVGIFLSVATLVLNFVFQAFQIGSNLWLTQWANDQNVANDTGLRDMYLGVYGAFGFGQVATNFFSSLAISLGCLKCSQLLHQTLLYYNLRWPMELFDTTPLGRIVNRFSKDIDTIDNVLPFNIRVVIGQAYMVLATIVVISLSTPIFLAVIVPIAFLYYFAQRFYVATSRQLMRLESVSRSPIYSHFSETVTGASTIRAYNVGDRFIEESDAKVDKNQVCKYPSVIANRWLAIRLEMVGNLIILFASLFAVLGGQTNPGLVGLSVSYALQVTQTLNWLVRMSSDIETNIVSVERIKEYGETKQEAPWELEQDKNKPKNWPQEGRVEFQNFQVRYREGLDLVLRGVSFNIQGGEKVGIVGRTGAGKSSLTLALFRIIEAAGGRISIDGVDIASMGLHMLRSRLTIIPQDPVLFSGSLRINLDPFEIKTDDEIWKALELSHLKSFVKSLAAGLNHEIAEGGENLSVGQRQLVCLARALLRKTKVLVLDEATAAVDLETDDLIQKTIRTEFKECTVLTIAHRLNTILDSDKVIVLDKGQIIEFASPTELLDNPKSAFYSMAKDANLV
Protein: Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain-containing protein (At2g36720) (Putative PHD-type zinc finger protein) (Q8RWG0)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Subcellular location: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
Interaction partners:
- Heteroglycan glucosidase 1
- Transcription factor LRL3
- Trihelix transcription factor ASIL2
Sequence:
MKEDLVPESNSSVWQSPVKRLAVDGECGEAGDRSRTSCKRIKTTQVNGFIVYTRTRKTKFTKLHEQEDENAGLSNHLEESKPTSGVTSGFGGDMCRSSSVGETNVSGSSCVKNTLVESSSGKVVVIERLVTGGLAESPAVETDSSSLVDVVIDDINFVELLHEAIPVEILSEGSLDFEVKRLGTKVRTMGKSYSVSEKKKHGSFKRTAQIYKSIVRMKKVNNLVPENVEVLAEPDFGREGLDEQSHSVSLADKSILIRSRPETVRDLFETGLLDGLSVVYMGTVKSQAFPLRGIIRDGGILCSCSSCDWANVISTSKFEIHACKQYRRASQYICFENGKSLLDVLNISRNTPLHALEATILDAVDYASKEKRFTCKRCKGPFPFSSLGHRGFLCKSCSEVETSQASLAATRTSTSAPACITSPVKSRLKITRKPSESTSISPVFMSSLGNSTRKITRKALRQALVGKAYLSASTNVSSQKKCRSKFKKMLTQHSVTPKALKSVSLSVSSKKRSYRLARKDQGLHKLVFDRGGLPEGTELGYYARGQKLLGGYKMGAGIYCYCCKCEVSPSLFEAHAGWASRRKPYFYIYTSNGVSLHEWATTFSHGRKYSANDNNDLCVICADGGNLLLCDSCPRAFHIECVSLPSIPRGNWHCKYCENKFTSEIAGEYNVNSSAVGQLEGVDPVDQLAGRCIRVVKNMEAETNGCVLCSGSDFCRSGFGPRTIIICDQCEKEYHIGCLSSQNIVDLKELPKGNWFCSMDCTRINSTLQKLLLGGAEKLSDSSLGIIQTKQERNDVYSISDLDIRWRLISGKVTSPESRMLLSQALAIFHDCFDPIVDPLSGSNLIPRMVYGKTMQGQDYGGICCAVLTVNATVVSAGLLRVFGREVAELPLVATRMCSREKGYFQLLFSCIEKLLSSLNVESIVVPAAEEAEPLWMNKFGFRKLAPEQLSKYIKICYQMVRFKGASMLQKPVDSHQIIDKTIETGASLEENFDLKQANELYVHPLC
Protein: Homeobox protein AKR (Avian knotted-related protein) (Q90655)
Organism: Gallus gallus (Chicken)
Function: Binds to the F' element of the APOVLDLII gene and represses its transcription.
Subcellular location: Nucleus.
Interaction partners:
- Mothers against decapentaplegic homolog
- Mothers against decapentaplegic homolog 3
- TGFB induced factor homeobox 2.
- Mothers against decapentaplegic homolog
Sequence:
MKSKKGVVAISGSETEDDDTMDVPLDLSSSAGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKVLLSRQTHLSTLQVCNWFINARRRLLPDMLRKDGKDPNQFTISRRGTKLPEGSMVESSMGTKNFLPLLEESPFLPASATLSKTVSSSKPVSPGSVLARPSVICHTTVTALKDAPFHFCQPGDVGQTTDLQQPPANAFTDSSLSYHEDASKLGPGANAQSGLFNTPPPTPPDLNQDFSGFQLLVDVALKRAAEMELQAKLMA
Protein: Protocadherin alpha-2 (PCDH-alpha-2) (Q9Y5H9)
Organism: Homo sapiens (Human)
Function: Potential calcium-dependent cell-adhesion protein. May be involved in the establishment and maintenance of specific neuronal connections in the brain.
Subcellular location: Cell membrane {ECO:0000250}; Single-pass type I membrane protein {ECO:0000250}.
Interaction partners:
- Protocadherin alpha-8
- Protocadherin alpha-3
- Protocadherin alpha-7
Sequence:
MASSIRRGRGAWTRLLSLLLLAAWEVGSGQLRYSVPEEAKHGTFVGRIAQDLGLELEELVPRLFRVASKRHGDLLEVNLQNGILFVNSRIDREELCGRSAECSIHVEVIVDRPLQVFHVEVEVKDINDNPPIFPMTVKTIRFPESRLLDSRFPLEGASDADIGVNALLSYKLSSSEFFFLDIQANDELSESLSLVLGKSLDREETAEVNLLLVATDGGKPELTGTVQILIKVLDVNDNEPTFAQSVYKVKLLENTANGTLVVKLNASDADEGPNSEIVYSLGSDVSSTIQTKFTIDPISGEIRTKGKLDYEEAKSYEIQVTATDKGTPSMSGHCKISLKLVDINDNTPEVSITSLSLPISENASLGTVIALITVSDRDSGTNGHVTCSLTPHVPFKLVSTFKNYYSLVLDSALDRESVSAYELVVTARDGGSPSLWATTSVSIEVADVNDNAPAFAQPEYTVFVKENNPPGCHIFTVSAWDADAQENALVSYSLVERRVGERALSSYVSVHAESGKVYALQPLDHEEVELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPALLAPRAGTAAGAVSELVPWSVGAGHVVAKVRAVDADSGYNAWLSYELQLGTGSARIPFRVGLYTGEISTTRALDEADSPRHRLLVLVKDHGEPALTATATVLVSLVESGQAPKASSRAWVGAAGSEATLVDVNVYLIIAICAVSSLLVLTVLLYTALRCSVPPTEGARAPGKPTLVCSSAVGSWSYSQQRRQRVCSGEDPPKTDLMAFSPSLSQGPDSAEEKQLSESEYVGKPRQPNPDWRYSASLRAGMHSSVHLEEAGILRAGPGGPDQQWPTVSSATPEPEAGEVSPPVGAGVNSNSWTFKYGPGNPKQSGPGELPDKFIIPGSPAIISIRQEPTNSQIDKSDFITFGKKEETKKKKKKKKGNKTQEKKEKGNSTTDNSDQ
Protein: TetR family transcriptional regulator (Q9JN89)
Organism: Streptomyces coelicolor
Interaction partners:
Sequence:
MTSAQQPTPFAVRSNVPRGPHPQQERSIKTRAQILEAASEIFASRGYRGASVKDVAERVGMTKGAVYFHFPSKESLAIAVVEEHYARWPAAMEEIRIQGFTPLETVEEMLHRAAQAFRDDPVMQAGARLQSERAFIDAELPLPYVDWTHLLEVPLQDAREAGQLRAGVDPAAAARSLVAAFFGMQHVSDNLHQRADIMERWQELRELMFFALRA
Protein: Small ribosomal subunit protein uS8c (30S ribosomal protein S8, chloroplastic) (P56801)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit.
Subcellular location: Plastid, chloroplast.
Interaction partners:
- Large ribosomal subunit protein uL14c
- Large ribosomal subunit protein uL16c
- Small ribosomal subunit protein uS7cz/uS7cy
- DNA-directed RNA polymerase subunit alpha
- Small ribosomal subunit protein uS11c
- Large ribosomal subunit protein bL36c
- Small ribosomal subunit protein uS12cz/uS12cy
- Small ribosomal subunit protein uS14c
- Large ribosomal subunit protein uL2cz/uL2cy
- Large ribosomal subunit protein uL22c
Sequence:
MGKDTIADIITSIRNADMNRKGTVRIGSTNITESIVKILLREGFIENVRKHRENNQYFLILTLRHRRNKKESYKTILNLKRISRPGLRIYSNSQRIPRILGGIGIVILSTSQGIMTDREARLKRIGGEILCYIW
Protein: Neuronal immunoglobulin domain-containing protein rig-3 (Q18806)
Organism: Caenorhabditis elegans
Function: Cell surface protein which plays a role in the plasticity of cholinergic synapses at neuromuscular junctions and in the polarity of the mechanosensory neuron ALM, possibly by antagonizing Wnt signaling.
Subcellular location: Cell projection, axon {ECO:0000269|PubMed:21745641}. Synapse {ECO:0000269|PubMed:21745641}. Cell membrane {ECO:0000269|PubMed:21745641}; Lipid-anchor, GPI-anchor {ECO:0000269|PubMed:21745641}. Note=Membrane association is important for synaptic function. {ECO:0000269|PubMed:21745641}.
Interaction partners:
- Ig-like domain-containing protein
- Contactin rig-6
- Neuroligin-1
- LITAF domain-containing protein
- NeuRonal IGCAM
- Ig-like domain-containing protein
- Glutamate receptor 1
- Protein sax-3
- Peptide transporter 3
Sequence:
MGRLLAKMLFPLAMCLFVSAVSASDSPSSNEANPIVISSEAMDYDTNTITVREGKKLMVSCVFESDEQIHKSDLLWKQANGNNIDGESNPSLFSVILNEKGSKHRKTSLHFSSVHTRDTGLYTCTGRTAGGENFEKTIKLVVLPAIEWNDKDTVKGALLGEPITIDCGVKGPSGKEPMIQMTNGNGEPLDEEIWTIAGNEATIDSLKKEHAELTVSCITIEMHQETSKEEFPVVDRKDVNIEVYTLPEFETEESVQYTVIDNHVRDAIIYCNVTHSFPPVRHYTFYHGDEEIKMSDKFNIFVNVGVSQGAHLKIHNVNENDLGTYKCEANNIKAKSYHTIHLREANAPAEPKVTLIEDKRHSIIWKVESIDRDPDLPMTAVEIRHLRAGTAEASGVSDEDISDAYWKSHSIFMQRNIKDDGIYEINGLRHGHEYVWRFRQINEAGFGDSVVLRAKTLDDHDLEMMDSASDSKFPLALATLFFVCLFI
Protein: Uncharacterized protein (Q9D3X2)
Organism: Mus musculus (Mouse)
Interaction partners:
Sequence:
MKLKSLLLRYYPPGIMLEYEKGGELKTKSIDLLELSPSADVNTLVGEIQQAEPLITASRTKQVRLLVQRLQEKLRQHSDHNFYLFKVLRAHILPLTNVALNKAGSCFITGSYDRTCKVWDTASGEELHTLEGHKNVVYAIAFNNPYGKVHTLIGHCAEISSALFNWDCSLILTGSMDKTCMLWDATSGKYVATLTGHDDEILDSCFDYTGKLIATASADGTARVYNATTRKCVTKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDVQTGQCLQVLEGHTDEIFSCAFNYKGNIVITGSKDNSCRIWR
Protein: Glutathione peroxidase (Q8IRD3)
Organism: Drosophila melanogaster (Fruit fly)
Interaction partners:
- Gamma-glutamyl transpeptidase, isoform A
- 1-Cys peroxiredoxin
- RE13973p
- Uncharacterized protein, isoform C
- Glutathione S transferase O3
- Peroxiredoxin-5
- Pyrimidodiazepine synthase
- Glutathione peroxidase
- glutathione-specific gamma-glutamylcyclotransferase
- glutathione-specific gamma-glutamylcyclotransferase
Sequence:
MSLRQFQNISRQALRCYSMRRTPGPVLELSRGQRQCLRLCTIMLPVSCAATPMNAISSAAQHSTAAAIDMSANGDYKNAASIYEFTVKDTHGNDVSLEKYKGKVVLVVNIASKCGLTKNNYEKLTDLKEKYGERGLVILNFPCNQFGSQMPEADGEAMVCHLRDSKADIGEVFAKVDVNGDNAAPLYKYLKAKQTGTLGSGIKWNFTKFLVNKEGVPINRYAPTTDPMDIAKDIEKLL
Protein: Nonribosomal peptide synthetase, discrete adenylation domain (Q8GGN5)
Organism: Streptomyces atroolivaceus
Interaction partners:
Sequence:
MSGAKLLHHWFLDGLARNPRGTALRINDRSWTYAEADRTARSWAAALHSGGRAPRRVGVLAAKSEESLLGFLAALYAGCTAVPLNPEYPVGRNRDIAAAAGLDALIVDPSGAAQLDEVAAAAPPLVTLAPRLGEWSGPRPGTPVLMPDPAGDRPPAQGPDSLAYILFTSGSTGRPKGVPIRHGNVSAFLAASLPRYDFGPDDVFGQVYELTFDLSMFEVWCAWSSGACLTVLNRLQALNPGRYIRAHGITVWTSTPSLVAALRTRGLLGGNSLPSVRHTVFCGEPLPEESAAYWSAAAPGTSIDNLYGPTELTIACTAYHWVPSPGSGTVPIGEPNTGLRYVLLDDGQVGADTGELCVTGPQMFDGYLDPANDTDRFLTHDGQRWYRTGDRVRRTPDGTLVHLGRDDGQVKIHGYRVELSEVEEAVRACAPGTEAVVLAVPGAAGPVLAAFVIGDDAAGRLTGTAQDLAHRLPPYMLPAHLWALADPPLNPNGKTDRLRLREEAARRLGRNLAPAS
Protein: Proteasome subunit alpha type-7 (20S proteasome subunit alpha-4) (Q9NDA2)
Organism: Trypanosoma brucei brucei
Function: The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity.
Subcellular location: Cytoplasm {ECO:0000250}. Nucleus {ECO:0000250}.
Interaction partners:
Sequence:
MSYDRAITVFSPDGHLFQVEYAQEAVRKGLCAVGVKGKDSIIFAVEKKSVQKLQDSRTTRKIYKLDEHIYLASAGLSADARVVVNHAQLECQRFRLSYEDAIDVDLLVRYVARVQQRSTQSSGSRPYGVSTIIGGFNENGQPQLWKTEPSGTSSAWNAAAIGRNDKVVLEFMEKNYQDGMTRDRCVHFAIKALLEAVESGSKNIELLVLERGKAAYMSDTELHRFVVEVEKEREEEAARRRRLAEED
Protein: Probable sugar phosphate/phosphate translocator At3g14410 (Q94EI9)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Subcellular location: Membrane {ECO:0000305}; Multi-pass membrane protein {ECO:0000305}.
Interaction partners:
Sequence:
MADRSKGFMRAEFVTYAYILLYIALSSGQIFFNKWVLSSKEINFPYPLGLTLLHMIFSSVLCFLLTKVLKIVKVEEGMTLEIYVTSVIPIGAMFAMTLWLGNTAYLYISVAFAQMLKAIMPVAVFILGVAAGLEMMSCRMLLIMSIISFGVLVASYGELNINWIGVVYQMGGVVGEALRLIFMELLVKRKGIKLNPISLMYYVSPCSAICLFVPWIFLEKSKIDGNGPWNFHFVVLTLNSLCTFALNLSVFLVISHTSALTIRVAGVVKDWVVVLVSALLFADTKLTIINLFGYAIAIAGVAAYNNHKLKKEASKVVTTETPGDAESIPLVSQGNTNTER
Protein: Zona pellucida-binding protein 1 (Inner acrosomal membrane IAM38) (Sp38) (Q9BS86)
Organism: Homo sapiens (Human)
Function: Plays a role in acrosome compaction and sperm morphogenesis. Is implicated in sperm-oocyte interaction during fertilization (By similarity).
Subcellular location: Cytoplasmic vesicle, secretory vesicle, acrosome {ECO:0000269|PubMed:31429579, ECO:0000269|PubMed:31985809}. Cytoplasmic vesicle, secretory vesicle, acrosome membrane {ECO:0000250|UniProtKB:Q62522}; Peripheral membrane protein {ECO:0000250|UniProtKB:Q62522}. Secreted {ECO:0000305}. Note=First localized in acrosome granule, later migrates to the inner and outer acrosomal membrane. Released after the acrosomal reaction. {ECO:0000250|UniProtKB:Q62522}.
Interaction partners:
- Sperm surface protein Sp17
- Sperm acrosome membrane-associated protein 1
- Probable C-mannosyltransferase DPY19L2
- Spermatogenesis-associated protein 16
Sequence:
MEAFALGPARRGRRRTRAAGSLLSRAAILLFISAFLVRVPSSVGHLVRLPRAFRLTKDSVKIVGSTSFPVKAYVMLHQKSPHVLCVTQQLRNAELIDPSFQWYGPKGKVVSVENRTAQITSTGSLVFQNFEESMSGIYTCFLEYKPTVEEIVKRLQLKYAIYAYREPHYYYQFTARYHAAPCNSIYNISFEKKLLQILSKLLLDLSCEISLLKSECHRVKMQRAGLQNELFFAFSVSSLDTEKGPKRCTDHNCEPYKRLFKAKNLIERFFNQQVEILGRRAEQLPQIYYIEGTLQMVWINRCFPGYGMNVQQHPKCPECCVICSPGSYNPRDGIHCLQCNSSLVYGAKTCL
Protein: Putative F-box/FBD/LRR-repeat protein At4g00315 (Q3EAE5)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Interaction partners:
Sequence:
MDKTSQLPDELLVKVLSFLPTKDAVRTSLLSMRWKSLWMWLPKLEYDFRHYSVSEGQGLARFITLSLLGHKAPAIESLSLKLRYGAIGSIKPEDIYLWVSLAVHDSNVRELSLKLCTFAERPTKLPKSLYKCKSIVILKLKDEILVDVPRKVCLPSLKTLFLGRVTYSDEDSLHRLLSNCPVLEDLVVERDRIDNLGKLSVVVKSLQRLTLKMSCPCHLDGIMMNTPSLKYLKVTDERQESDSDNESDSDSPRYFYDFEDMPKLEEADFVLTFQNIKKFFKFVTSIKRLSLCLGVYTEESLYHEGLVFNQLEQLKICSCDSDWSILLSRLLESSPNLRELEAYVIEDHPDRRVDLPNQWGNQLNCVPKCLLSSLETFKWSEMYGLLQNQMDVAKYILRNARCLKSATIFFPTTYAKETRDEMIEELSLSFQGPETCQVFFH