wanglab/gogpt-training-data huggingface dataset:
Protein: PML-RARA-regulated adapter molecule 1 (PRAM) (PRAM-1) (Q96QH2)
Organism: Homo sapiens (Human)
Function: May be involved in myeloid differentiation. May be involved in integrin signaling in neutrophils. Binds to PtdIns(4)P.
Interaction partners:
- Retinoic acid receptor alpha
- Nuclear receptor corepressor 2
- Src kinase-associated phosphoprotein 2
- Nuclear receptor corepressor 1
- Src kinase-associated phosphoprotein 1
- DNA
- Zinc finger and BTB domain-containing protein 16
Sequence:
MAHHLPAAMESHQDFRSIKAKFQASQPEPSDLPKKPPKPEFGKLKKFSQPELSEHPKKAPLPEFGAVSLKPPPPEVTDLPKKPPPPEVTDLPKKPPPPEVTDLPKKPPPPEVTDLPKKPSKLELSDLSKKFPQLGATPFPRKPLQPEVGEAPLKASLPEPGAPARKPLQPDELSHPARPPSEPKSGAFPRKLWQPEAGEATPRSPQPELSTFPKKPAQPEFNVYPKKPPQPQVGGLPKKSVPQPEFSEAAQTPLWKPQSSEPKRDSSAFPKKASQPPLSDFPKKPPQPELGDLTRTSSEPEVSVLPKRPRPAEFKALSKKPPQPELGGLPRTSSEPEFNSLPRKLLQPERRGPPRKFSQPEPSAVLKRHPQPEFFGDLPRKPPLPSSASESSLPAAVAGFSSRHPLSPGFGAAGTPRWRSGGLVHSGGARPGLRPSHPPRRRPLPPASSLGHPPAKPPLPPGPVDMQSFRRPSAASIDLRRTRSAAGLHFQDRQPEDIPQVPDEIYELYDDVEPRDDSSPSPKGRDEAPSVQQAARRPPQDPALRKEKDPQPQQLPPMDPKLLKQLRKAEKAEREFRKKFKFEGEIVVHTKMMIDPNAKTRRGGGKHLGIRRGEILEVIEFTSNEEMLCRDPKGKYGYVPRTALLPLETEVYDDVDFCDPLENQPLPLGR
Protein: Dis3 like 3'-5' exoribonuclease 2, isoform C (EC 3.1.13.-) (FI04463p) (Q8IRJ7)
Organism: Drosophila melanogaster (Fruit fly)
Interaction partners:
- Exosome complex component 10 homolog
- Terminal uridylyltransferase Tailor
- Csl4
- FI07225p
- FI06805p
- Exosome complex component RRP45
- Ribosomal RNA-processing protein 42
- Nuclear nucleic acid-binding protein C1D
- Exosome complex component RRP4
- FI01414p
Sequence:
MPYPLYPAHSQVMSETSSVNVDADRDCRRIEGLRQRSQRLAARLQQMQREMESNASSKDLSANNAVIPLQPLMRWAEPRPHPNQSQPSARSNSRQAIPYGVPVSTPAPVAMQLPYHVAFASYQATMQIPCLQPLSHLHVVSSPSHRLIAKKKSKRALRNEVEALQDMVKHLSHLSPDVNAYACQLIRKNEILSQLEWSQTRSEAHPQQVGYQGRHRHDSEVSATNNGSHVQQQPKLGRRQRNSKKNDGSGSNGTQSQKTELEAMRSYINKIVQRHVGMDHQLSEDLIFKGNFSDLEAHAQRLVAAGYGRIVEEEIRVNRKNNRQAFIIMSTDREALERDGIVLLPVARRYAFDGDKVRAFVLNPGAQGSSKTAEPSSGEISGGKPSLSLADGEELSDDTESQGSESDTDNVVVISSDNCPKAFVIAITKRTELRQIVGTISFTNPTKLCDDQLFYKFRPYDLRVPMVYVPKDACAAHIGNKQQIDVSGLLYLAHILETDCNGHCIAELIQPVGRVGNLDDELKAILFHNGLRDIKPFEQRFIDIYSQPPPPISQEDLRQRKDLRKMCIFTIDPMTARDLDDAVSIEKLGDNEYEIGVHISDVSHFLIEDNELDNIVKERSTSIYLANEVIHMLPQSLCMRCSLLPGQDKFAFSVFWRMNGKGVMLQKKPEFCRTVINSCSQFAYEHAQKIIDNPNERFTENDFPTILNGFNPDDIRNRVLWLHDIASSIRKTRLDNGALTINNAKLRFLLDPITGEPLSFEVEKQREANRLIEEFMLLANQAVARFIHDSFPDIAVLRNHPPPLIKSLKALREKLLALGFELDYSSSKALQESMVRLCNEAPNPVAMNACLSQLLMKPMARATYFCSEGKSEPADLWHYALSIPIYTHFTSPIRRYPDILVHRLLAAALKYCTPPKRTPDDLHTLTKLANERKYNAKKAGEDSGNLYFKRYVHNKQGIYMRAVVIEIFQHMMNVVTLESGHVISINYKMQKVLVDTHGVPNYILIAERNLKQSPRKLQLLSVVPICLIIWDQKLTGFLKMEEQI
Protein: glutathione transferase (EC 2.5.1.18) (E9PLF1)
Organism: Homo sapiens (Human)
Interaction partners:
Sequence:
MPMTLGYWNIRGLAHSIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLNEKFKLGLDFPNLPYLIDGTHKITQSNAILRYIARKHNLCGESEKEQIREDILENQFMDSRMQLAKLCYDPDFALPEMLKLYSQFLGKQPWFLGDKITFV
Protein: Down syndrome cell adhesion molecule 1, isoform CA (A0A0B4K6Q9)
Organism: Drosophila melanogaster (Fruit fly)
Interaction partners:
Sequence:
MNMPNERLKWLMLFAAVALIACGSQTLAANPPDADQKGPVFLKEPTNRIDFSNSTGAEIECKASGNPMPEIIWIRSDGTAVGDVPGLRQISSDGKLVFPPFRAEDYRQEVHAQVYACLARNQFGSIISRDVHVRAVVAQYYDTDVNKAYVIRGNAAVLKCEIPSFVADFVSVVSWHTDQNEDFLPGSEYDGKYLVLPSGELHIREVGPEDGYKSYQCRTKHRLTGETRLSATKGRLVITEPVGSIGPRLTSGDESRILRVYLAASATLLCPAQAYPVPFFRWYKFIEGTTRKQAVVLNDRVKQVSGTLIIKDAVVEDSGKYLCVVNNSVGGESVETVLTVTAPLSAKIDPPTQTVDFGRPAVFTCQYTGNPIKTVSWMKDGKAIGHSEPVLRIESVKKEDKGMYQCFVRNDQESAEASAELKLGGRFDPPVIRQAFQEETMEPGPSVFLKCVAGGNPTPEISWELDGKKIANNDRYQVGQYVTVNGDVVSYLNITSVHANDGGLYKCIAKSKVGVAEHSAKLNVYGLPYIRQMEKKAIVAGETLIVTCPVAGYPIDSIVWERDNRALPINRKQKVFPNGTLIIENVERNSDQATYTCVAKNQEGYSARGSLEVQVMVLPQIVPFAYEDLINMGDSIDLFCQIQKGDRPIKVHWSFERSAGDYGFDQVQPQMRTNRISEKTSMISIPSASPAHTGRDTCIASNKAGTTTYSVDLTVNVPPRWILEPTDKAFAQGSDAKVECKADGFPKPQVTWKKAVGDTPGEYKDLKKSDNIRVEEGTLHVDNIQKTNEGYYLCEAINGIGSGLSAVIMISVQAPPEFTEKLRNQTARRGEPAVLQCEAKGEKPIGILWNMNNMRLDPKNDNRYTIREEILSTGVMSSLSIKRTERSDSALFTCVATNAFGSDDASINMIVQEVPEMPYALKVLDKSGRSVQLSWAQPYDGNSPLDRYIIEFKRSRASWSEIDRVIVPGHTTEAQVQKLSPATTYNIRIVAENAIGTSQSSEAVTIITAEEAPSGKPQNIKVEPVNQTTMRVTWKPPPRTEWNGEILGYYVGYKLSNTNSSYVFETINFITEEGKEHNLELQNLRVYTQYSVVIQAFNKIGAGPLSEEEKQFTAEGTPSQPPSDTACTTLTSQTIRVGWVSPPLESANGVIKTYKVVYAPSDEWYDETKRHYKKTASSDTVLHGLKKYTNYTMQVLATTAGGDGVRSVPIHCQTEPDVPEAPTDVKALVMGNAAILVSWRPPAQPNGIITQYTVYSKAEGAETETKTQKVPHYQMSFEATELEKNKPYEFWVTASTTIGEGQQSKSIVAMPSDQVPAKIASFDDTFTATFKEDAKMPCLAVGAPQPEITWKIKGVEFSANDRMRVLPDGSLLIKSVNRQDAGDYSCHAENSIAKDSITHKLIVLAPPQSPHVTLSATTTDALTVKLKPHEGDTAPLHGYTLHYKPEFGEWETSEVSVDSQKHNIEGLLCGSRYQVYATGFNNIGAGEASDILNTRTKGQKPKLPEKPRFIEVSSNSVSLHFKAWKDGGCPMSHFVVESKKRDQIEWNQISNNVKPDNNYVVLDLEPATWYNLRITAHNSAGFTVAEYDFATLTVTGGTIAPLDDGSGHGNVHTRIRLPAWMPEWLDLNFMVPLIATVVVVAVGICVVCVALSRRRADDMRGGQKDVYYDVVYNQTMGPGATLDKRRPDLRDELGYIAPPNRKLPPVPGSNYNTCDRIKRGRGGLRSNHSTWDPRRNPNLYEELKAPPVPMHGNHYGHAHGNAECHYRHPGMEDEICPYATFHLLGFREEMDPTKAMNFQTFPHQNGHAGPVPGHAGTMLPPGHPGHVHSRSGSQSMPRANRYQRKNSQGGQSSIYTPAPEYDDPANCAEEDQYRRYTRVNSQGGSLYSGPGPEYDDPANCAPEEDQYGSQYGGPYGQPYDHYGSRGSMGRRSIGSARNPGNGSPEPPPPPPRNHDMSNSSFNDSKESNEISEAECDRDHGPRGNYGAVKRSPQPKDQRTTEEMRKLIERNETGPKQLQLQQANGAGFTAYDTMAV
Protein: WD repeat protein mio zinc-ribbon like domain-containing protein (Q57ZC3)
Organism: Trypanosoma brucei brucei (strain 927/4 GUTat10.1)
Interaction partners:
Sequence:
MGPLVVVSPEVEEARKRASVYFAPCVGIQATPAKLPSGRGAPTVIVCDPVSEVDGTCMVVVRLQREFQGAVEPKNSVSGFMVVAEWVAVFPPSYPAAPCSWRYAKDGCVQGSEHDSGGGANRCCGLQSFVLEEAISKLTAPKLSHNGGCNDTVENAADYYGKLRYGCSRLTSLRPVDASGSSTEVSMDAGAVGRGVEQATGSLFLSGFSFLCTWWGALELDESCLVLERDCVHSGSTTALYEESNGWSLRDDFVGHFEDFMGSNMVLRPKRQFAAAFMPNGGILSWGRSDRSEAKGIDDRSASASLAKGRPHPDATSSGGFSSSSPLFNRGCGNTECGDGIDGNTIGLTGVAGVFSHGPDSQSVQGRIFLTNSALDLSVVPKGVSKERRMLLPSLLAPENILHTKKYTMNDVCLYDDKPHSALCKNAHITRNAKALRGVSLTFRTLSHIVKGALVVQTPLLCARKLLIPALAQSVETMQAQRQPFWAGVVVCCVVLPSILSEEPAFPDIAKHLIHPVECYRCVSVVSHVFFIMDQPVKFREVELVMSAIETAYCNATLNQQLHMASRSSPINAYGDSGSGGPGTVGAKDKDLSPALLPTDTCAICGLSLLPGGQGHGSGGAEGGATPPPSSKRNGCLILRCIYCGHGGHMSHIMAWWNDQSVHRCPRGCNCVCVY
Protein: Lymphocyte-specific helicase (EC 3.6.4.-) (Proliferation-associated SNF2-like protein) (Q60848)
Organism: Mus musculus (Mouse)
Function: Plays an essential role in normal development and survival. Involved in regulation of the expansion or survival of lymphoid cells. Required for de novo or maintenance DNA methylation. May control silencing of the imprinted CDKN1C gene through DNA methylation. May play a role in formation and organization of heterochromatin, implying a functional role in the regulation of transcription and mitosis.
Subcellular location: Nucleus {ECO:0000269|PubMed:10781083, ECO:0000269|PubMed:14517253, ECO:0000269|PubMed:14612388}. Note=Closely associated with pericentric heterochromatin.
Interaction partners:
- ATPase family AAA domain-containing protein 2
- Cell division cycle-associated protein 7
- DNA
- Exonuclease 1
- DNA replication licensing factor MCM4
- Cell division control protein 6 homolog
- DNA repair protein RAD51 homolog 1
- WD repeat-containing protein 76
- DNA
- Serine/threonine-protein kinase Chk1
Sequence:
MAEQTEPAVITPAMLEEEEQLEAAGLEKERKMLEEAQKSWDRESTEIRYRRLQHLLEKSNIYSKFLLTKMEQQQLEEQKKKEKLEKKKRSLKLTEGKSLVDGNGEKPVMKKKRGREDESYNISEVMSKEEILSVAKKHKDNEDESSSTTSLCVEDIQKNKDSNSMIKDRLSQTVRQNSKFFFDPVRKCNGQPVPFQQPKHFTGGVMRWYQVEGMEWLRMLWENGINGILADEMGLGKTVQCIATIALMIQRGVPGPFLVCGPLSTLPNWMAEFKRFTPEIPTLLYHGTREDRRKLVKNIHKRQGTLQIHPVVVTSFEIAMRDQNALQHCYWKYLIVDEGHRIKNMKCRLIRELKRFNADNKLLLTGTPLQNNLSELWSLLNFLLPDVFDDLKSFESWFDITSLSETAEDIIAKEREQNVLHMLHQILTPFLLRRLKSDVALEVPPKREVVVYAPLCNKQEIFYTAIVNRTIANMFGSCEKETVELSPTGRPKRRSRKSINYSELDQFPSELEKLISQIQPEVNRERTVVEGNIPIESEVNLKLRNIMMLLRKCCNHPYMIEYPIDPVTQEFKIDEELVTNSGKFLILDRMLPELKKRGHKVLVFSQMTSMLDILMDYCHLRNFIFSRLDGSMSYSEREKNIYSFNTDPDVFLFLVSTRAGGLGINLTAADTVIIYDSDWNPQSDLQAQDRCHRIGQTKPVVVYRLVTANTIDQKIVERAAAKRKLEKLIIHKNHFKGGQSGLSQSKNFLDAKELMELLKSRDYEREVKGSREKVISDEDLELLLDRSDLIDQMKASRPIKGKTGIFKILENSEDSSAECLF
Protein: non-specific serine/threonine protein kinase (EC 2.7.11.1) (Q388G0)
Organism: Trypanosoma brucei brucei (strain 927/4 GUTat10.1)
Interaction partners:
Sequence:
MEKYTKVRVLGKGSFGSAILIKRRSDNALFVIKEVFLGKLNEKERTEARQECRMLQKLNHPNIVRYVEHFENRNNLYIVMEYCDDGDLHGKIKRGPMNESRILYYYSQVCLAMEYLHSRHILHRDIKTMNVFLMKNGSVKLGDFGIATVLRNTMGMASTVCGTPYYFSPEICKNKPYNNKSDVWALGVLLYELATGRHPFDGNSMQQLMQRIVRGTYNPLPSHFSREFRKMVDWCLQKDPARRPSIRQMLAFPIVQRSLERLEEDLMLATQCRIRLKDIIEYDAAAENIPCCEPVTPRPQETPRGEQRHRQEPHPPEMSPGKMAAMALAGQHNRQQQQQAPECFVRQQHVSPRAAMAAGPPAVDPAAQRHADHAGLLAPKPNAAHAAADHGRLEIFRREAPPQCKRPLADIKQALPFSPYQRPHFQQVPCQPQYVANPYKQLMQQHFQQLQEKQRQPHQPQPDAQRQMQKNNEAKRGPDCKQGEGFEDRIKRINAIVERYAKDVDPKTLNTIHAYMKRKQEEYLQRQKEQKERLERRRQLRKQELLKVIEQQNRIARGEKVRKGVEQKQHAQKPVAEMKPLNPGQPAVGDRNAYPSPYKVLQSPPRGAQYPQQQNPVFGRDPRCVRAAPKESNPVSGGRNGNAIASPYCPNYHNAALREALKGPAPPVDSPGIPDNQRVRQLYQQPGMQPRGDGDSAARGVAASPRVVVYRDVVNLNDNPRRAEPSQLNAGQLEPKPQKGKRTADPSVHRHPLGRPKEPCPLVIPTADQVFQKQQPLRRQLKQQPLTNIVSAPLLPTPRAESPVAKAIVNHHDIKKLGSAEGDLRSPFANGTLGRRNSAPSISPSMEVTPSKNSPLNEKEAAVNKCHVRPTTASGFVAEGASATKDLPALRVTSPFSRLNLEDLPADVKVRRELQQQAKQHALLSQLKGDFNLHPAKRNDVVCGRSKSCAPEFVNARHKGGSPILYRRKDGFLPSNQRGGCSKSQEINGDDDSSKNEIGQPMLLAPLQCRAGVAAQGQCLSPAVFSMPVSPSAAPHGQRRQTFQRGGASRNNHVPQATPPDAAPSMVVAKINPKVHQPAPTREKKPDNGRSPAFEESIHTPILVDICYGVAPTSEEALNKKAAFEGDSTPVLPSINDVTADPPDVAQQWRNFVDKNANGKAPYRALCSHLVGMGFHNNMKLPGHADEMAVFQKVDGPRPCIPSTLEVLVGTSVSKKHSPVTSSSGSDTTAFDAETRGRERCSDELPSLTSIPCIISPTSVACAAGEGCQSKPYGLQKDSDAEETGGFIGLEDDPRASRDDEGRQGSTGSVQVLPEASLDGYLSMLDHLRGLLYNNPSQAKKASAGNNSDKKNVKEREPSLLSAEEVRNLVDRCERLSRSEATRATSPNQGAIGVHVVSLNFPTSSVDGCEENKEGESRDDESDLDDEEDLDEAIMEVSDVEFGDDVPLTAPQSAGISEAYQCDIENDGFLPRVVNVDSQGNCSEGGNDARTERRKEEKETAIGGAA
Protein: V(D)J recombination-activating protein 1 (EC 2.3.2.27) (O70607)
Organism: Rattus norvegicus (Rat)
Interaction partners:
Sequence:
MAVPLPSTLRLSSAPDEIQHPHIKFSEWKFKMFRVRSFEKAPEEAQKEKDSSEGKPCLEQSPVVLDKPGGQNSVLTQRALKLHPKFSKKFHVDGKSSDKAIHQARLRHFCRICGNHFKSDGHNRRYPVTGPVDAKTQSLFRKKEKRVTSWPDLIARVFRIDVKAD
Protein: Chitin synthase regulatory factor 1 (Chs four homolog 4) (O59732)
Organism: Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Function: Involved in chitin biosynthesis.
Interaction partners:
- Chitin synthase regulatory factor 2
- Protein adg1
- Serine/threonine-rich protein adg2
- Probable secreted beta-glucosidase adg3
- Glucan endo-1,3-alpha-glucosidase agn1
- Primary septum glucan endo-1,3-beta-D-glucosidase
Sequence:
MPASTSIPETPSKLPDALLVNSDPASKVDNVSVKIEQESPLALEGSPLPTVSDVLPETNNAHEEVSSSSWSLSSSDSIMSYDSLSDDVSVLSFLDCPLTTFETAPSIASFSNSAADVSSHSRSSSSWSAKLSRFTKHASKPSLSSNSSDSSFSKSGSESNALSSRGSFELEPHGIHRHVSRAKRLLSKFYSKFHHKKEDSSFDPLAPLVFAPNTSRVLRVTNEANASAISLEKATSLSSQEQPGSEIKKELSLYDHEFDQILDLAIKAKKDGNLENAIEFLEYIMPEVASQQNFVPYELAELYKQRGTSQDLKSILPLYMLAASLGHDRSSFLVGEAFFYGTYGARENKLRALQYYHLANDKGNADAMLALCKLYLRGLPGHIFPSSRRAFEYAHRAAMLGHAPACYVLGKFYETGVGCVKDLAKSEAGFRAGLINDSPITDADALQIASTLVLLQ
Protein: Fructose-bisphosphate aldolase (EC 4.1.2.13) (Q803Q7)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Interaction partners:
- Glyceraldehyde-3-phosphate dehydrogenase
- Glyceraldehyde-3-phosphate dehydrogenase 2
- Triosephosphate isomerase B
- L-lactate dehydrogenase A chain
- Triosephosphate isomerase A
- Transketolase
- transketolase
- Fructose-1,6-bisphosphatase 1
- Fructose-1,6-bisphosphatase 2
- Fructose-1,6-bisphosphatase 1
Sequence:
MPHAYPFLTPEQKKELSDIAQRIVAPGKGILAADESTGSVAKRFQSINAENTEENRRLYRQLLFTADDRVKPCIGGVILFHETLYQKTDDGKVFSDYLKERGMVVGIKVDKGVVPLAGTNGETTTQGLDGLYERCAQYKKDGADFAKWRCVLKITPTTPSRLAIIENANVLARYASICQMHGIVPIVEPEILPDGDHDLKRCQYVTEKVLAAVYKALSDHHVYLEGTLLKPNMVTAGHACSQKNTPQEIAMATVTALRRTVPPAVPGVTFLSGGQSEEEATLNLNAMNQCPLHRPWALTFSYGRALQASALKAWGGKKENGKACQEEFIKRALNNSQACVGKYVSSGDKGAAAGESLFVANHAY
Protein: FAD dependent oxidoreductase domain-containing protein (Q9I477)
Organism: Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Interaction partners:
- 4-hydroxyproline 2-epimerase
- Probable oxidoreductase
- Probable dihydrodipicolinate synthetase
- Sarcosine oxidase alpha subunit
- Hydrogen cyanide synthase subunit HcnB
Sequence:
MNAEVIVVGAGIVGSACAHELARRGLDVLVLDSRRGGATAVGMGHLVAMDDNPAELALSDYSTQAWRAWAAELPEDCAYRGCGTLWLAADASELAEAERKRQALQAAGVACRMLGAARLYALEPALRPGLAGALEVSGDGILYAPNAARWLLDQAGPRLRRLYAEVSEVDGSRLRLADGRWLSAEALVLANGIHAGELCAELPIRPKKGHLLITDRYPGTLRHQLVELGYVSSAHASSGTSVAFNAQPRPTGQVFLGSSRQFDTLDPQVEGPVLARMLRRALDYLPGLAGLNAIRAWTGFRAATPDGLPLLGEHPAQPGLWLAVGHEGLGVTTAPGSARLLAAQLFGETPPLDPTPYLPQRFLSSSGSARP
Protein: Fibroblast growth factor 8 (FGF-8) (O57341)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Function: Plays an important role in the regulation of embryonic development, cell proliferation, cell differentiation and cell migration (By similarity). Required for Kupffer's vesicle ciliogenesis.
Subcellular location: Secreted {ECO:0000250|UniProtKB:P55075}.
Interaction partners:
- Fibroblast growth factor receptor 1-A
- Fibroblast growth factor 3
- Fibroblast growth factor receptor 4
- Fibroblast growth factor receptor 2
- Sonic hedgehog protein
- Fibroblast growth factor receptor 3
- Fibroblast growth factor receptor.
- receptor protein-tyrosine kinase
- Bone morphogenetic protein 4.
- Homeobox protein GBX-2
Sequence:
MRLIPSRLSYLFLHLFAFCYYAQVTIQSPPNFTQHVSEQSKVTDRVSRRLIRTYQLYSRTSGKHVQVLANKKINAMAEDGDVHAKLIVETDTFGSRVRIKGAETGFYICMNRRGKLIGKKNGLGKDCIFTEIVLENNYTALQNVKYEGWYMAFTRKGRPRKGSKTRQHQREVHFMKRLPKGHQIAEHRPFDFINYPFNRRTKRTRYSGER
Protein: pre-mRNA 3' end processing protein WDR33 (WD repeat-containing protein 33) (WD repeat-containing protein of 146 kDa) (Q9C0J8)
Organism: Homo sapiens (Human)
Function: Essential for both cleavage and polyadenylation of pre-mRNA 3' ends.
Subcellular location: Nucleus {ECO:0000269|PubMed:11162572, ECO:0000269|PubMed:19217410}.
Interaction partners:
- Cleavage and polyadenylation specificity factor subunit 2
- Cleavage and polyadenylation specificity factor subunit 4
- Cleavage and polyadenylation specificity factor subunit 1
- Pre-mRNA 3'-end-processing factor FIP1
- Symplekin
- Cleavage and polyadenylation specificity factor subunit 3
- Cleavage stimulation factor subunit 3
- WD repeat-containing protein 82
- E3 ubiquitin-protein ligase RBBP6
- Cleavage stimulation factor subunit 2
Sequence:
MATEIGSPPRFFHMPRFQHQAPRQLFYKRPDFAQQQAMQQLTFDGKRMRKAVNRKTIDYNPSVIKYLENRIWQRDQRDMRAIQPDAGYYNDLVPPIGMLNNPMNAVTTKFVRTSTNKVKCPVFVVRWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTADHGGYVKYWQSNMNNVKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERILRGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKLNLNGNWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWHVGVEKEVGGMEMAHEGMIWSLAWHPLGHILCSGSNDHTSKFWTRNRPGDKMRDRYNLNLLPGMSEDGVEYDDLEPNSLAVIPGMGIPEQLKLAMEQEQMGKDESNEIEMTIPGLDWGMEEVMQKDQKKVPQKKVPYAKPIPAQFQQAWMQNKVPIPAPNEVLNDRKEDIKLEEKKKTQAEIEQEMATLQYTNPQLLEQLKIERLAQKQVEQIQPPPSSGTPLLGPQPFPGQGPMSQIPQGFQQPHPSQQMPMNMAQMGPPGPQGQFRPPGPQGQMGPQGPPLHQGGGGPQGFMGPQGPQGPPQGLPRPQDMHGPQGMQRHPGPHGPLGPQGPPGPQGSSGPQGHMGPQGPPGPQGHIGPQGPPGPQGHLGPQGPPGTQGMQGPPGPRGMQGPPHPHGIQGGPGSQGIQGPVSQGPLMGLNPRGMQGPPGPRENQGPAPQGMIMGHPPQEMRGPHPPGGLLGHGPQEMRGPQEIRGMQGPPPQGSMLGPPQELRGPPGSQSQQGPPQGSLGPPPQGGMQGPPGPQGQQNPARGPHPSQGPIPFQQQKTPLLGDGPRAPFNQEGQSTGPPPLIPGLGQQGAQGRIPPLNPGQGPGPNKGDSRGPPNHHMGPMSERRHEQSGGPEHGPERGPFRGGQDCRGPPDRRGPHPDFPDDFSRPDDFHPDKRFGHRLREFEGRGGPLPQEEKWRRGGPGPPFPPDHREFSEGDGRGAARGPPGAWEGRRPGDERFPRDPEDPRFRGRREESFRRGAPPRHEGRAPPRGRDGFPGPEDFGPEENFDASEEAARGRDLRGRGRGTPRGGRKGLLPTPDEFPRFEGGRKPDSWDGNREPGPGHEHFRDTPRPDHPPHDGHSPASRERSSSLQGMDMASLPPRKRPWHDGPGTSEHREMEAPGGPSEDRGGKGRGGPGPAQRVPKSGRSSSLDGEHHDGYHRDEPFGGPPGSGTPSRGGRSGSNWGRGSNMNSGPPRRGASRGGGRGR
Protein: Azurin (P00282)
Organism: Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Function: Transfers electrons from cytochrome c551 to cytochrome oxidase.
Subcellular location: Periplasm.
Interaction partners:
- Cytochrome c-551
- Nitrite reductase
- Cytochrome c551 peroxidase
- Copper transport outer membrane porin OprC
- Probable cytochrome c1
- Copper-resistant cuproprotein CopI
- Outer membrane protein OprG
- Major outer membrane lipoprotein
- Transcriptional regulatory protein AlgP
- Outer membrane porin F
Sequence:
MLRKLAAVSLLSLLSAPLLAAECSVDIQGNDQMQFNTNAITVDKSCKQFTVNLSHPGNLPKNVMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDDSRVIAHTKLIGSGEKDSVTFDVSKLKEGEQYMFFCTFPGHSALMKGTLTLK
Protein: Intraflagellar transport protein 88 homolog (OSM-5) (G5ED37)
Organism: Caenorhabditis elegans
Interaction partners:
- CHE-2 protein
- Intraflagellar transport protein osm-1
- Intraflagellar transport protein 52 C-terminal domain-containing protein
- Intraflagellar transport protein che-13
- Tetratricopeptide repeat protein 30 homolog
- Intraflagellar transport protein 46 homolog
- TRAF3-interacting protein 1
- Intraflagellar transport protein 56 homolog
- Clusterin-associated protein 1 homolog
- Intraflagellar transport protein 81 homolog
Sequence:
MANSTFREDDDDFYGGFDSYDKAYDIQNITQNPQFQQAVARSSHGRRPTASQMGFRDASSSYGKPPGTMMGNQSRMGGRTAMANNNEPARPMTAVRGAGYTSFANKVQAAERPLSTENSGENGEEKCRQMENKVMEMLRESMLASEKKKFKEALDKAKEAGRRERAVVKHREQQGLVEMMNLDLTFTVLFNLAQQYEANDMTNEALNTYEIIVRNKMFPNSGRLKVNIGNIHFRKREFTKALKYYRMALDQVPSIQKDTRIKILNNIGVTFVRMGSYDDAISTFDHCVEENPNFITALNLILVAFCIQDAEKMREAFVKMIDIPGFPDDDYMKEKDDDDVLLNQTLNSDMLKNWEKRNKSDAEKAIITAVKIISPVIAPDYAIGYEWCLESLKQSVHAPLAIELEMTKAGELMKNGDIEGAIEVLKVFNSQDSKTASAAANNLCMLRFLQGGRRLVDAQQYADQALSIDRYNAHAQVNQGNIAYMNGDLDKALNNYREALNNDASCVQALFNIGLTAKAQGNLEQALEFFYKLHGILLNNVQVLVQLASIYESLEDSAQAIELYSQANSLVPNDPAILSKLADLYDQEGDKSQAFQCHYDSYRYFPSNLETVEWLASYYLETQFSEKSINYLEKAALMQPNVSKWQMMIASCLRRTGNYQRAFELYRQIHRKFPQDLDCLKFLVRIAGDLGMTEYKEYKDKLEKAEKINQLRLQRESDSSQGKRHSANSTHSLPPSGLTGLGSGSGGSSGGGTRQYSAHVPLLLDSGTPFTVAQRDMKAEDFSYDDPVAISSRPKTGTRKTTTDTNIDDFGDFDDSLLPD
Protein: Protein C2-DOMAIN ABA-RELATED 9 (Q9S7J9)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Stimulates the GTPase/ATPase activities of Obg-like ATPases (By similarity). Mediates the transient calcium-dependent interaction of PYR/PYL/RCAR abscisic acid (ABA) receptors with the plasma membrane and thus regulates ABA sensitivity.
Subcellular location: Cell membrane {ECO:0000269|PubMed:31102784}. Nucleus {ECO:0000269|PubMed:31102784}. Note=Localization at the plasma membrane increases upon abscisic acid (ABA) treatment, at the expense of nuclear localization. {ECO:0000269|PubMed:31102784}.
Interaction partners:
- Germin-like protein subfamily 1 member 15
- Peptidyl-prolyl cis-trans isomerase CYP19-1
- Coatomer subunit delta
Sequence:
MEDKPLGILRVHVKRGINLAIRDATTSDPYVVITLANQKLKTRVINNNCNPVWNEQLTLSIKDVNDPIRLTVFDKDRFSGDDKMGDAEIDFRPFLEAHQMELDFQKLPNGCAIKRIRPGRTNCLAEESSITWSNGKIMQEMILRLKNVECGEVELMLEWTDGPGCKGLGREGSKKTPWMPTKRLD
Protein: Dynamin associated protein 160, isoform B (Q8INU2)
Organism: Drosophila melanogaster (Fruit fly)
Interaction partners:
Sequence:
MNSAVDAWAVTPRERLKYQEQFRALQPQAGFVTGAQAKGFFLQSQLPPLILGQIWALADTDSDGKMNINEFSIACKLINLKLRGMDVPKVLPPSLLSSLTGDVPSMTPRGSTSSLSPLDPLKGIVPAVAPVVPVVAPPVAVATVISPPGVSVPSGPTPPTSNPPSRHTSISERAPSIESVNQGEWAVQAAQKRKYTQVFNANDRTRSGYLTGSQARGVLVQSKLPQVTLAQIWTLSDIDGDGRLNCDEFILAMFLCEKAMAGEKIPVTLPQEWVPPNLRKIKSRPGSVSGVVSRPGSQPASRHASVSSQSGVGVVDADPTAGLPGQTSFEDKRKENYVKGQAELDRRRKIMEDQQRKEREERERKEREEADKREKARLEAERKQQEELERQLQRQREIEMEKEEQRKRELEAKEAARKELEKQRQQEWEQARIAEMNAQKEREQERVLKQKAHNTQLNVELSTLNEKIKELSQRICDTRAGVTNVKTVIDGMRTQRDTSMSEMSQLKARIKEQNAKLLQLTQERAKWEAKSKASGAALGGENAQQEQLNAAFAHKQLIINQIKDKVENISKEIESKKEDINTNDVQMSELKAELSALITKCEDLYKEYDVQRTSVLELKYNRKNETSVSSAWDTGSSSAWEETGTTVTDPYAVASNDISALAAPAVDLGGPAPEGFVKYQAVYEFNARNAEEITFVPGDIILVPLEQNAEPGWLAGEINGHTGWFPESYVEKLEVGEVAPVAAVEAPVDAQVATVADTYNDNINTSSIPAASADLTAAGDVEYYIAAYPYESAEEGDLSFSAGEMVMVIKKEGEWWTGTIGSRTGMFPSNYVQKADVGTASTAAAEPVESLDQGMRAKRSEIAQVIAPYEATSTEQLSLTRGQLIMIRKKTDSGWWEGELQAKGRRRQIGWFPATYVKVLQGGRNSGRNTPVSGSRIEMTEQILDKVIALYPYKAQNDDELSFDKDDIISVLGRDEPEWWRGELNGLSGLFPSNYVGPFVTSGKPAKANGTTKK
Protein: 2,5-dihydroxypyridine 5,6-dioxygenase (2,5-DHP dioxygenase) (EC 1.13.11.9) (Nicotinate degradation protein X) (Q88FY1)
Organism: Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440)
Function: Catalyzes the dioxygenolytic ring cleavage of 2,5-dihydroxypyridine between carbons 5 and 6 generating N-formylmaleamate in the aerobic nicotinate degradation pathway.
Interaction partners:
- N-formylmaleamate deformylase
- 6-hydroxynicotinate 3-monooxygenase
- Maleate isomerase
- HTH-type transcriptional repressor NicR
- Maleamate amidohydrolase
- Probable cytosol aminopeptidase
- Nicotinate dehydrogenase subunit B
- Alpha/beta hydrolase
- Putative metabolite transport protein NicT
- Nicotinate dehydrogenase subunit A
Sequence:
MPVSNAQLTQMFEHVLKLSRVDETQSVAVLKSHYSDPRTVNAAMEAAQRLKAKVYAVELPAFNHPTAMGNDMTAYCGDTALTGNLAAQRALEAADLVVDTMMLLHSPEQEQILKTGTRILLAVEPPEVLARMLPTEDDKRRVLAAETLLKQARSLHVRSKAGSDFHAPLGQYPAVTEYGYADEPGRWDHWPSGFLFTWPNEDSAEGTLVLDVGDIILPFKNYCRERITLEIEKGFITGIHGGFEAEYLRDYMKYFNDPEVYGISHIGWGLQPRAQWTAMGLHDRNDGMCMDARAFYGNFLFSTGPNTEVGGKRKTPCHLDIPLRNCDIYLDDKAVVLAGDVVAPEESRAR
Protein: Expansin (C0Z241)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Subcellular location: Secreted, cell wall {ECO:0000256|RuleBase:RU365023}. Membrane {ECO:0000256|RuleBase:RU365023}; Peripheral membrane protein {ECO:0000256|RuleBase:RU365023}.
Interaction partners:
Sequence:
MALVTFLFIATLGAMTSHVNGYAGGGWVNAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACFEIRCQNDGKWCLPGSIVVTATNFCPPNNALPNNAGGWCNPPQQHFDLSQPVFQRIAQYRAGIVPVAYRRVPCVRRGGIRFTINGHSYFNLVLITNVGGAGDVHSAMVKGSRTGWQAMSRNWGQNWQSNSYLNGQSLSFKVTTSDGQTIVSNNVANAGWSFGQTFTVEAVRERGMIVIWSFLSIEVNLKRSGASSA
Protein: Bcl2-associated agonist of cell death (BAD) (Bcl-2-binding component 6) (Bcl-xL/Bcl-2-associated death promoter) (Bcl2 antagonist of cell death) (Q61337)
Organism: Mus musculus (Mouse)
Function: Promotes cell death. Successfully competes for the binding to Bcl-X(L), Bcl-2 and Bcl-W, thereby affecting the level of heterodimerization of these proteins with BAX. Can reverse the death repressor activity of Bcl-X(L), but not that of Bcl-2. Appears to act as a link between growth factor receptor signaling and the apoptotic pathways.
Subcellular location: Mitochondrion outer membrane. Cytoplasm {ECO:0000269|PubMed:21546903}. Note=Colocalizes with HIF3A isoform 2 in the cytoplasm (PubMed:21546903). Upon phosphorylation, locates to the cytoplasm. {ECO:0000269|PubMed:21546903}.
Interaction partners:
- Bcl-2-like protein 1
- Apoptosis regulator Bcl-2
- RAC-alpha serine/threonine-protein kinase
- 14-3-3 protein beta/alpha
- cAMP-dependent protein kinase catalytic subunit alpha
- 14-3-3 protein theta
- RAC-gamma serine/threonine-protein kinase
- RAC-beta serine/threonine-protein kinase
- RAF proto-oncogene serine/threonine-protein kinase
- Mitogen-activated protein kinase 3
Sequence:
MGTPKQPSLAPAHALGLRKSDPGIRSLGSDAGGRRWRPAAQSMFQIPEFEPSEQEDASATDRGLGPSLTEDQPGPYLAPGLLGSNIHQQGRAATNSHHGGAGAMETRSRHSSYPAGTEEDEGMEEELSPFRGRSRSAPPNLWAAQRYGRELRRMSDEFEGSFKGLPRPKSAGTATQMRQSAGWTRIIQSWWDRNLGKGGSTPSQ
Protein: Phosphate regulating endopeptidase X-linked (G3V723)
Organism: Rattus norvegicus (Rat)
Subcellular location: Membrane {ECO:0000256|ARBA:ARBA00004606}; Single-pass type II membrane protein {ECO:0000256|ARBA:ARBA00004606}.
Interaction partners:
- Fibroblast growth factor 23
- Matrix extracellular phosphoglycoprotein
- Dentin matrix acidic phosphoprotein 1
- Parathyroid hormone
- Sclerostin
- Sodium-dependent phosphate transport protein 2C
- Ectonucleotide pyrophosphatase/phosphodiesterase family member 1
- Klotho
- Polypeptide N-acetylgalactosaminyltransferase.
- Sodium-dependent phosphate transport protein 2A
Sequence:
MEAEAGSTMETGKGTNRGIRIALALFITGTLVLGTLLFLVSQGLLSFQAKQEYCLKPECIEAAAAIMSKVNLSVDPCENFFRFACDGWISNNPIPEDMPSYGVYPWLRHNVDLKLKALLEKSVSRRRDTEAVQKAKILYSSCMNEKAIEKADAKPLLHILRHSPFRWPVLEANIGPEGVWSERKFSLLQTLATFRGQYSNSVFIRLYVSPDDKASNEHILKLDQATLSLAVREDFLDNTTEAKSYRDALYKFMVDTAVLLGANSSRAEHDMKSVLRLEIKIAEIMIPHENRTSEAMYNKMNISELSAMIPQFDWLGYIKKVIDTRLYPHLKDIGPSENVVVRVPQYFKDLFRILGAERKKTIANYLVWRMVYSRIPNLSRRFQYRWLEFSRVIQGTTTLLPQWDKCVNFIESALPYVVGKMFVNVHFQEDKKEMMEELIEGVRWAFIDMLEKENEWMDAGTKRKAQEKARAVLAKVGYPEFIMNDTYVNEDLKAIKFSESDYFGNVLQTRKYLAQSDFFWLRKAVPKTEWFTNPTTVNAFYSASTNQIRFPAGELQKPFFWGTEYPRSLSYGAIGVIVGHEFTHGFDNNGRKYDKNGNLDPWWSVDSEEKFKEKTKCMINQYSNYYWKKAGLNVKGKRTLGENIADNGGLREAFRAYRKWINDRRQGVEEPLLPGITFTNNQLFFLSYAHVRCNSYRPEAAREQVQIGAHSPPQFRVNGAISNFEEFQKAFNCPANSTMNRGADSCRLW