wanglab/bioreason-pro-rl-reasoning-data huggingface dataset:
Protein: DASH complex subunit DUO1 (Q59P88)
Organism: Candida albicans (strain SC5314 / ATCC MYA-2876) (Yeast)
Subcellular location: Chromosome, centromere, kinetochore. Cytoplasm, cytoskeleton, spindle. Nucleus
Sequence: MSSTPVTPQTNSSSKVTVSTSREVALEQELSQITNINAVLEQFLQTIEKVNGDLNQINNGATNTMILMNKWTDIMSQADFTLDVINNSGWIPNDEYDNEFGEGQQQQQDDNEDEEEIEAKLRALEQENLEISKKIENQAKEKNAKMNRAREIDSKRKRELGLFNVRKKASR
InterPro domains: - IPR013960: DASH complex subunit Duo1 (family) [8-170]
Interaction partners: - DASH complex subunit DAD3
- Small ribosomal subunit protein mS29
- DASH complex subunit DAM1
- Large ribosomal subunit protein mL49
- Large ribosomal subunit protein uL4m
- Mitochondrial 54S ribosomal protein YmL47
- MIND complex subunit
- Mitochondrial 54S ribosomal protein YmL3
- Large ribosomal subunit protein mL54
- Small ribosomal subunit protein uS9m
Gene Ontology annotations:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0005515 (protein binding)
Biological Process (BP): GO:0008150 (biological process), GO:0040007 (growth), GO:0009987 (cellular process), GO:0050896 (response to stimulus), GO:0009605 (response to external stimulus), GO:0051716 (cellular response to stimulus), GO:0030447 (filamentous growth), GO:0006950 (response to stress), GO:0009607 (response to biotic stimulus), GO:0007154 (cell communication), GO:0009991 (response to extracellular stimulus), GO:0031668 (cellular response to extracellular stimulus), GO:0044182 (filamentous growth of a population of unicellular organisms), GO:0036180 (filamentous growth of a population of unicellular organisms in response to biotic stimulus), GO:0042594 (response to starvation), GO:0071496 (cellular response to external stimulus), GO:0033554 (cellular response to stress), GO:0036170 (filamentous growth of a population of unicellular organisms in response to starvation), GO:0009267 (cellular response to starvation), GO:0031669 (cellular response to nutrient levels), GO:0031667 (response to nutrient levels)
Cellular Component (CC): GO:0005575 (cellular component), GO:0032991 (protein-containing complex), GO:0110165 (cellular anatomical entity), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0098687 (chromosomal region), GO:0000940 (outer kinetochore), GO:0140513 (nuclear protein-containing complex), GO:0099080 (supramolecular complex), GO:0042729 (DASH complex), GO:0000776 (kinetochore), GO:0043229 (intracellular organelle), GO:0043227 (membrane-bounded organelle), GO:0000775 (chromosome, centromeric region), GO:0043228 (non-membrane-bounded organelle), GO:0000779 (condensed chromosome, centromeric region), GO:0043231 (intracellular membrane-bounded organelle), GO:0043232 (intracellular non-membrane-bounded organelle), GO:0005694 (chromosome), GO:0005634 (nucleus), GO:0000793 (condensed chromosome)
Protein: catechol O-methyltransferase (A0A1D8PRK7)
Organism: Candida albicans (strain SC5314 / ATCC MYA-2876) (Yeast)
Sequence: MSKETEFYNYITTLPETTLSQVRGKPHEVLKLIDEYPQNFMNIGPHKGTQIVTRIKEKAPKTMIELGGYLGYSAVLFANEIADDPDAKYYSFELNPEFAKIATYVIDLAGLSDKVEIIVGRASYTLPAFRQRLFSENKHYTGLDFIFIDHWKDLYVPDLRVLESLNLIAPGTLIVADNIITPGAPEYVVYVNFSPDEKKLYNETTKNPEGKEFIGRWNILYDTKTIEVATANHKDAIEVTKCVDYFSG
InterPro domains: - IPR002935: Class I-like SAM-dependent O-methyltransferase (family) [1-217]
- IPR029063: S-adenosyl-L-methionine-dependent methyltransferase superfamily (homologous_superfamily) [2-211]
Interaction partners: - Adh5p
- alcohol dehydrogenase
- Enoyl reductase (ER) domain-containing protein
- Adh3p
- Alcohol dehydrogenase 2
- Amine oxidase
- S-(hydroxymethyl)glutathione dehydrogenase
- Amine oxidase
Gene Ontology annotations:
Molecular Function (MF): GO:0003674 (molecular function), GO:0003824 (catalytic activity), GO:0016740 (transferase activity), GO:0016741 (transferase activity, transferring one-carbon groups), GO:0008168 (methyltransferase activity), GO:0008757 (S-adenosylmethionine-dependent methyltransferase activity)
Biological Process (BP): GO:0008150 (biological process), GO:0008152 (metabolic process), GO:0071704 (organic substance metabolic process), GO:0009056 (catabolic process), GO:1901575 (organic substance catabolic process), GO:1901135 (carbohydrate derivative metabolic process), GO:1901136 (carbohydrate derivative catabolic process), GO:1901658 (glycosyl compound catabolic process), GO:0016137 (glycoside metabolic process)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0071944 (cell periphery), GO:0030312 (external encapsulating structure), GO:0031012 (extracellular matrix), GO:0062039 (biofilm matrix), GO:0062040 (fungal biofilm matrix)
Protein: ferric-chelate reductase (NADPH) (A0A1D8PKY2)
Organism: Candida albicans (strain SC5314 / ATCC MYA-2876) (Yeast)
Subcellular location: Cell membrane; Multi-pass membrane protein
Sequence: MAIPFDQQFFVEKDRNNKYEWLIFVLTFIVLAGHGILFYWIPRYLRVNNKRNNYFRLLKVWDAWTSCVHVWGDFYFQPSLVLLGILFVGLNVGFCFAEINDLDYQSRFYIISKRLSKVAVGNLPILLFAVMKNDLLTSITGLQHDRLEFVHKWLSRLMWVMITIHMGMACYYWLNLNFKIMIMIPPQIFGFMAYGSFSILNWASLKFIRQFAYDFFLVQHRIFAFMMLFFTFIHNQGNRAVVLISVHGLVIDRVVSKVFAYLHAKKSPTKGRCTFRIIDDSTISVVIPVSEAGYTSKSWYTRFLPKYKTWKAGQHIYLNVGKIKFFQYHPFTISSLAESGEMKLLIRVERGFTRKLMRHLEQVDHDEVTIKAMFHGPYGARYQPLITFDTCLFFAAGSGGAFTFPVCLDLLNQIDRRDQEGDVLFRPKNQFIKFVWAIRKQDNIEWFEDSLKQFAGRCSVDIYITQETKEELPLQRKNSIIEITKSLTNDYNILYGRPQIQDIIQQHSQSLGANQSMAVTSCGSPSFTNSIKHHCQSARRVKGAPEVYCYTESF
InterPro domains: - IPR013112: FAD-binding 8 (domain) [305-380]
- IPR017927: FAD-binding domain, ferredoxin reductase-type (domain) [270-384]
- IPR017938: Riboflavin synthase-like beta-barrel (homologous_superfamily) [304-380]
- IPR039261: Ferredoxin-NADP reductase (FNR), nucleotide-binding domain (homologous_superfamily) [373-554]
- IPR013121: Ferric reductase, NAD binding domain (domain) [388-535]
- IPR051410: Ferric/Cupric Reductase Transmembrane Component (family) [5-554]
- IPR013130: Ferric reductase transmembrane component-like domain (domain) [118-230]
Interaction partners: - Fth1p
- Siderophore transporter
- GPI-anchored hemophore PGA7
- High-affinity iron permease
- GPI-anchored hemophore RBT5
- Fre9p
- Hap43p
Gene Ontology annotations:
Molecular Function (MF): GO:0003674 (molecular function), GO:0003824 (catalytic activity), GO:0016491 (oxidoreductase activity), GO:0016722 (oxidoreductase activity, acting on metal ions), GO:0000293 (ferric-chelate reductase activity)
Biological Process (BP): GO:0008150 (biological process), GO:0050789 (regulation of biological process), GO:0040007 (growth), GO:0065007 (biological regulation), GO:0030447 (filamentous growth), GO:0040008 (regulation of growth), GO:0044182 (filamentous growth of a population of unicellular organisms), GO:0010570 (regulation of filamentous growth), GO:0070783 (growth of unicellular organism as a thread of attached cells), GO:1900428 (regulation of filamentous growth of a population of unicellular organisms), GO:0070784 (regulation of growth of unicellular organism as a thread of attached cells)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0071944 (cell periphery), GO:0016020 (membrane), GO:0005886 (plasma membrane)
Protein: Srp40p (A0A1D8PSB9)
Organism: Candida albicans (strain SC5314 / ATCC MYA-2876) (Yeast)
Sequence: MGECGWGEGIFSSQRKKRPRFVFGLISLSLSYSHKRRATIKVCPNGLEKNFFFNFFFHLLKSQLLQLLPIAKMSSNTQDLVLAYINDYVSRNEELSKLKKALSKFLAGKELPKVSKQLESIIDEVENQEKKSKPRNSSSDSEDSSSESESSTSDSESSSSDSDSSSSDSESSSSDSESSSSDSEDSDDEEDKEDKEAEKDNKDSEDSENEKVEEDNKDTSSDSSSSSDSKSDSDSDSSSSSDSSSDSDSSSDSDSSSSSDSDSSSSSDSDSDSDSDSDSDDNSSESSSEDEESSSDSESKEEQKQPEDKKRKHTDDIKEEKPVKKFKNESESSASSSTDSIPATPEPELKPGQRKHFSRIDRSKVNFENSVLQDNTYKGAAGTWGEKASEKLLQVRGKDFTKNKNKMKRGSYKGGSITLASGSYKFED
InterPro domains: - IPR007718: Srp40, C-terminal (domain) [356-426]
Interaction partners: - Nucleolar protein 56
- rRNA 2'-O-methyltransferase fibrillarin
- H/ACA ribonucleoprotein complex subunit CBF5
- Nucleolar protein 58
- Cic1p
- Nucleolar protein 2
- Ltv1p
- RNA-binding ribosome biosynthesis protein
- RNA-binding GTPase
- DNA-directed RNA polymerase subunit
Gene Ontology annotations:
Molecular Function (MF): GO:0003674 (molecular function), GO:0098772 (molecular function regulator activity), GO:0005488 (binding), GO:0030234 (enzyme regulator activity), GO:0005515 (protein binding), GO:0140678 (molecular function inhibitor activity), GO:0004857 (enzyme inhibitor activity)
Biological Process (BP): GO:0008150 (biological process), GO:0050789 (regulation of biological process), GO:0065007 (biological regulation), GO:0050794 (regulation of cellular process), GO:1900239 (regulation of phenotypic switching)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0031974 (membrane-enclosed lumen), GO:0043229 (intracellular organelle), GO:0043233 (organelle lumen), GO:0043227 (membrane-bounded organelle), GO:0043228 (non-membrane-bounded organelle), GO:0070013 (intracellular organelle lumen), GO:0043232 (intracellular non-membrane-bounded organelle), GO:0043231 (intracellular membrane-bounded organelle), GO:0031981 (nuclear lumen), GO:0005730 (nucleolus), GO:0005634 (nucleus)
Protein: RNA polymerase-associated protein LEO1 (A0A1D8PQH1)
Organism: Candida albicans (strain SC5314 / ATCC MYA-2876) (Yeast)
Sequence: MSDEEIDDLFGEETTEKIVDLSLPRHAVVSVMEKDVRLLKTPDFLNIEAHPFDPSSFKEQIESNNKVRRERGLTAKEIHNEQMTEKLLNENTIRWRYHNAGNDEIVKQSNAHFVEWSDGSVSLKVGNEVYDVRELPMFDHLLVKSHQAAEVLQADSILSKSINLLPASSSHRKILVKNITKKEKILNTITDVDPLEKQRLADEDVRKAMKMKRQMESRRRLQEEKWERSGSPRAQESSYERFERTYEGEGYDENDDFVAGDEEEIEEYEEEEEFERGAERLTQLKEEGAAKYRRHSEDEDEDEKTRKRRRIIDSDEE
InterPro domains: - IPR007149: Leo1-like protein (family) [5-316]
Interaction partners: - RNA polymerase-associated protein CTR9
- Cdc73p
- RNA polymerase II-associated protein 1
- FACT complex subunit POB3
- Rtf1p
- FACT complex subunit SPT16
- Transcription elongation factor SPT5
- Transcription elongation factor SPT4
- Transcription elongation factor SPT6
- DNA-directed RNA polymerase subunit beta
Gene Ontology annotations:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0005515 (protein binding)
Biological Process (BP): GO:0008150 (biological process), GO:0040007 (growth), GO:0009987 (cellular process), GO:0050896 (response to stimulus), GO:0009605 (response to external stimulus), GO:0051716 (cellular response to stimulus), GO:0030447 (filamentous growth), GO:0006950 (response to stress), GO:0009607 (response to biotic stimulus), GO:0007154 (cell communication), GO:0009991 (response to extracellular stimulus), GO:0031668 (cellular response to extracellular stimulus), GO:0044182 (filamentous growth of a population of unicellular organisms), GO:0036180 (filamentous growth of a population of unicellular organisms in response to biotic stimulus), GO:0042594 (response to starvation), GO:0071496 (cellular response to external stimulus), GO:0033554 (cellular response to stress), GO:0036170 (filamentous growth of a population of unicellular organisms in response to starvation), GO:0009267 (cellular response to starvation), GO:0031669 (cellular response to nutrient levels), GO:0031667 (response to nutrient levels)
Cellular Component (CC): GO:0005575 (cellular component), GO:0032991 (protein-containing complex), GO:0110165 (cellular anatomical entity), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0140535 (intracellular protein-containing complex), GO:1902494 (catalytic complex), GO:0140513 (nuclear protein-containing complex), GO:0031974 (membrane-enclosed lumen), GO:0005654 (nucleoplasm), GO:0030880 (RNA polymerase complex), GO:1990234 (transferase complex), GO:0043229 (intracellular organelle), GO:0008023 (transcription elongation factor complex), GO:0043233 (organelle lumen), GO:0055029 (nuclear DNA-directed RNA polymerase complex), GO:0016591 (RNA polymerase II, holoenzyme), GO:0043227 (membrane-bounded organelle), GO:0000428 (DNA-directed RNA polymerase complex), GO:0043231 (intracellular membrane-bounded organelle), GO:0061695 (transferase complex, transferring phosphorus-containing groups), GO:0016593 (Cdc73/Paf1 complex), GO:0070013 (intracellular organelle lumen), GO:0005634 (nucleus), GO:0031981 (nuclear lumen)
Protein: DASH complex subunit SPC34 (A0A1D8PM85)
Organism: Candida albicans (strain SC5314 / ATCC MYA-2876) (Yeast)
Subcellular location: Chromosome, centromere, kinetochore. Cytoplasm, cytoskeleton, spindle. Nucleus
Sequence: MTVSDPLEKLQQSFRSIQSTNFDDAQMFTNSIVNAPAITTLLKDPTHDESLLYKIVKPKTNKGPSKLVSAIVESASMDSKPERVDGKILYTLEGIISDKPEDEDSEEEDGRNPVVKFPKLGPRNAYSRPFINLPISEDFKETFYQISQVLSKYPNLIDDYPTLINKLNTYEDNYRKLQRDIESLEEEIKESKAFLEDNYNVSYSPKVKPSASFDSDGSDAQIDIDEAIRREEEEIEQLELQFNQRGY
InterPro domains: - IPR013966: DASH complex subunit Spc34 (family) [5-244]
Interaction partners: - DASH complex subunit SPC19
- DASH complex subunit DAD3
- DASH complex subunit DAD2
- DASH complex subunit DAD4
- DASH complex subunit DAM1
- DASH complex subunit DAD1
- Probable electron transfer flavoprotein subunit alpha
- DASH complex subunit ASK1
- Probable electron transfer flavoprotein subunit beta
- DASH complex subunit DUO1
Gene Ontology annotations:
Molecular Function (MF): GO:0003674 (molecular function), GO:0060090 (molecular adaptor activity), GO:0030674 (protein-macromolecule adaptor activity)
Biological Process (BP): GO:0008150 (biological process), GO:0040007 (growth), GO:0009987 (cellular process), GO:0050896 (response to stimulus), GO:0009605 (response to external stimulus), GO:0051716 (cellular response to stimulus), GO:0030447 (filamentous growth), GO:0006950 (response to stress), GO:0009607 (response to biotic stimulus), GO:0007154 (cell communication), GO:0009991 (response to extracellular stimulus), GO:0031668 (cellular response to extracellular stimulus), GO:0044182 (filamentous growth of a population of unicellular organisms), GO:0036180 (filamentous growth of a population of unicellular organisms in response to biotic stimulus), GO:0042594 (response to starvation), GO:0071496 (cellular response to external stimulus), GO:0033554 (cellular response to stress), GO:0036170 (filamentous growth of a population of unicellular organisms in response to starvation), GO:0009267 (cellular response to starvation), GO:0031669 (cellular response to nutrient levels), GO:0031667 (response to nutrient levels)
Cellular Component (CC): GO:0005575 (cellular component), GO:0032991 (protein-containing complex), GO:0110165 (cellular anatomical entity), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0098687 (chromosomal region), GO:0140513 (nuclear protein-containing complex), GO:0099080 (supramolecular complex), GO:0042729 (DASH complex), GO:0000776 (kinetochore), GO:0043229 (intracellular organelle), GO:0043227 (membrane-bounded organelle), GO:0000775 (chromosome, centromeric region), GO:0043228 (non-membrane-bounded organelle), GO:0000779 (condensed chromosome, centromeric region), GO:0043231 (intracellular membrane-bounded organelle), GO:0043232 (intracellular non-membrane-bounded organelle), GO:0005694 (chromosome), GO:0005634 (nucleus), GO:0000793 (condensed chromosome)
Protein: ferric-chelate reductase (NADPH) (A0A1D8PQI6)
Organism: Candida albicans (strain SC5314 / ATCC MYA-2876) (Yeast)
Subcellular location: Cell membrane; Multi-pass membrane protein
Sequence: MDEELQKHLEISRNTKYQWIACIFSLVIFLANGIVFYWIPRLLRDKRFVKTNRFKPYFAFVDIWQTINTPFSIKVGKKTHYFKPSLLALGACFILLNGKLCYIETDDLDYKPRIFIIGKRCARIALGQMPAMFLSVTKGDFITALTGLTYERAAFFHAWFATLMFSMMTAHVGIIGFYWAHPNYDIAPKYPKNVYGIIGYACFVFLVFGNVALIRRYAFEFLMVNHRVHSFIMLLMAFLHNDRAKAMVILAIHLLVLDKVLGRIYGIVHSLKSPTKGLSEFEILDDETLRVSIPVKTSKTDPTPWYRLFLFKYGTWLAGSHVYLNVRKVDFFQHHPFAVASLPESGKITLVIKKRNGFTKKLYDKVKTMRDEQLDSETSETDPNIVKLKAAFRGPSSGKFQPLITFDSVAFLAQDYGASFVLPLCLDLLQTIEKKEVAKNYLGRPAHPYLKVYWSVKRLNNIYWYEDLVRKLLPFINSGKLTMNVFVQESVELEATKSVSTKKLDIVSVTSDPSSITNSEIKFIYEEPMEVSQVIQSHISSMHFPEEKAFKSLAIMSCGNDNFGSQVESESQKYRWVKDAPNIYFYNESYET
InterPro domains: - IPR013112: FAD-binding 8 (domain) [315-380]
- IPR017927: FAD-binding domain, ferredoxin reductase-type (domain) [271-402]
- IPR017938: Riboflavin synthase-like beta-barrel (homologous_superfamily) [300-364]
- IPR039261: Ferredoxin-NADP reductase (FNR), nucleotide-binding domain (homologous_superfamily) [392-590]
- IPR013121: Ferric reductase, NAD binding domain (domain) [406-570]
- IPR051410: Ferric/Cupric Reductase Transmembrane Component (family) [10-590]
- IPR013130: Ferric reductase transmembrane component-like domain (domain) [122-236]
Gene Ontology annotations:
Molecular Function (MF): GO:0003674 (molecular function), GO:0003824 (catalytic activity), GO:0016491 (oxidoreductase activity), GO:0016722 (oxidoreductase activity, acting on metal ions), GO:0000293 (ferric-chelate reductase activity)
Biological Process (BP): GO:0008150 (biological process), GO:0050789 (regulation of biological process), GO:0040007 (growth), GO:0065007 (biological regulation), GO:0030447 (filamentous growth), GO:0040008 (regulation of growth), GO:0044182 (filamentous growth of a population of unicellular organisms), GO:0010570 (regulation of filamentous growth), GO:0070783 (growth of unicellular organism as a thread of attached cells), GO:1900428 (regulation of filamentous growth of a population of unicellular organisms), GO:0070784 (regulation of growth of unicellular organism as a thread of attached cells)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0071944 (cell periphery), GO:0016020 (membrane), GO:0005886 (plasma membrane)
Protein: Prn1p (A0A1D8PDN9)
Organism: Candida albicans (strain SC5314 / ATCC MYA-2876) (Yeast)
Sequence: MSTRSIAKIVTANEQAEGAGARVRRSIGIMNQRNFDPFLMFDHFSSAGTNGFPEHPHRGQETITLVLNGAMAHEDFTGSKGILYAGDLQFMTAGKGVVHSEMPVANADGSPTVGLQLWVDLPNNMKGVKPRYRDLREWEIPEVVTDDGKVTIKVISGRSHGVESVKELAYTPINYYYYKVKAGGEFKQELQPGFNYFLYVLNGRNLVLNEDTKVDRYQNVFFGDKGDFITGKNAATKDNNETEVQFILVGGKKLEQEVVQYGPFVASSRDNIQKAFQDYQYGRNGFENIKTWQTLISGGVTKEMIEGPLNGNLEKRAAKKKAFLEKQQKKAAPVAAQPELVKDEL
InterPro domains: - IPR012093: Pirin (family) [2-295]
- IPR014710: RmlC-like jelly roll fold (homologous_superfamily) [17-280]
- IPR008778: Pirin, C-terminal domain (domain) [177-285]
- IPR003829: Pirin, N-terminal domain (domain) [21-119]
- IPR011051: RmlC-like cupin domain superfamily (homologous_superfamily) [4-295]
Gene Ontology annotations:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0003824 (catalytic activity), GO:0036094 (small molecule binding), GO:0043167 (ion binding), GO:0097159 (organic cyclic compound binding), GO:1901363 (heterocyclic compound binding), GO:0097367 (carbohydrate derivative binding), GO:0016491 (oxidoreductase activity), GO:0043168 (anion binding), GO:0000166 (nucleotide binding), GO:0032553 (ribonucleotide binding), GO:1901265 (nucleoside phosphate binding), GO:0010181 (FMN binding)
Biological Process (BP): GO:0008150 (biological process), GO:0042592 (homeostatic process), GO:0048878 (chemical homeostasis), GO:0019725 (cellular homeostasis), GO:0050801 (monoatomic ion homeostasis), GO:0055082 (intracellular chemical homeostasis), GO:0098771 (inorganic ion homeostasis), GO:0006873 (intracellular monoatomic ion homeostasis), GO:0055072 (iron ion homeostasis), GO:0055080 (monoatomic cation homeostasis), GO:0006879 (intracellular iron ion homeostasis), GO:0030003 (intracellular monoatomic cation homeostasis)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0071944 (cell periphery), GO:0030312 (external encapsulating structure), GO:0031012 (extracellular matrix), GO:0062039 (biofilm matrix), GO:0062040 (fungal biofilm matrix)
Protein: GTPase Ypt3 (B6K5E1)
Organism: Schizosaccharomyces japonicus (strain yFS275 / FY16936) (Fission yeast)
Subcellular location: Golgi apparatus membrane; Lipid-anchor
Sequence: MSQEDEYDYLFKTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDITKQSSFDNVGRWLKELRDHADSNIVIMLVGNKTDLLHLRAVSTEEAQAFAAENNLSFIETSAMDASNVEEAFQTVLTEIFRIVSNRAMEGGDEGAHPSAGQTLNIAPTIGDSGKSKSSGQCC
InterPro domains: - IPR050209: Rab GTPases family involved in membrane trafficking (family) [6-183]
- IPR001806: Small GTPase (family) [2-214]
- IPR005225: Small GTP-binding domain (domain) [10-168]
- IPR027417: P-loop containing nucleoside triphosphate hydrolase (homologous_superfamily) [3-214]
Interaction partners: - Phosphatidylinositol kinase Pik1
- Rab GDP dissociation inhibitor
- Guanyl-nucleotide exchange factor Sec2
- Myosin-52
- Rho-type GTPase activating protein Rga3
- Rho-type GTPase activating protein Rga4
- Myosin-51
- Rab geranylgeranyltransferase escort protein
- GTP-binding protein ypt1
- AP-1 adaptor complex mu subunit Apm1
Gene Ontology annotations:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0005515 (protein binding)
Biological Process (BP): GO:0008150 (biological process), GO:0009987 (cellular process), GO:0051179 (localization), GO:0051234 (establishment of localization), GO:0051641 (cellular localization), GO:0140352 (export from cell), GO:0033036 (macromolecule localization), GO:0070727 (cellular macromolecule localization), GO:0051649 (establishment of localization in cell), GO:0032940 (secretion by cell), GO:0046907 (intracellular transport), GO:0045184 (establishment of protein localization), GO:0006810 (transport), GO:0006888 (endoplasmic reticulum to Golgi vesicle-mediated transport), GO:0035592 (establishment of protein localization to extracellular region), GO:0071702 (organic substance transport), GO:0046903 (secretion), GO:0016192 (vesicle-mediated transport), GO:0008104 (protein localization), GO:0071705 (nitrogen compound transport), GO:0009306 (protein secretion), GO:0015031 (protein transport), GO:0048193 (Golgi vesicle transport), GO:0071692 (protein localization to extracellular region)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0016020 (membrane), GO:0005737 (cytoplasm), GO:0031090 (organelle membrane), GO:0031410 (cytoplasmic vesicle), GO:0043229 (intracellular organelle), GO:0043227 (membrane-bounded organelle), GO:0030139 (endocytic vesicle), GO:0043231 (intracellular membrane-bounded organelle), GO:0098588 (bounding membrane of organelle), GO:0031982 (vesicle), GO:0012506 (vesicle membrane), GO:0030659 (cytoplasmic vesicle membrane), GO:0045335 (phagocytic vesicle), GO:0030666 (endocytic vesicle membrane), GO:0097708 (intracellular vesicle), GO:0030670 (phagocytic vesicle membrane)