wanglab/bioreason-pro-rl-reasoning-data huggingface dataset:
Protein: pyruvate decarboxylase (EC 4.1.1.1) (A6MUS9)
Organism: Gossypium hirsutum (Upland cotton) (Gossypium mexicanum)
Function: Not known
Sequence: AADGYARSRGVGACVVTFTVGGLSVLNAIAGAYSENLPLICIVGGPNSNDYGTNRILHHTIGLPDFSQELRCFQTVTCYQAVVNNLEDAHEMIDTAISTALKESKPVYISISCNLPAIPHPTFDREPVPFSLSPKLSNKIGLEAAVEAAAEFLNKAVKPVLVGGPKLRVAKACEAFVELADASGYAVAVMPSGKGLVPEHHPHFIGTYWGAVS
InterPro domains: - IPR047213: Pyruvate decarboxylase/indolepyruvate decarboxylase-like, pyrimidine-binding domain (domain) [1-113]
- IPR029061: Thiamin diphosphate-binding fold (homologous_superfamily) [1-124]
- IPR029035: DHS-like NAD/FAD-binding domain superfamily (homologous_superfamily) [129-212]
- IPR012001: Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain (domain) [1-54]
- IPR012000: Thiamine pyrophosphate enzyme, central domain (domain) [146-211]
- IPR012110: Pyruvate decarboxylase/indolepyruvate decarboxylase-like (family) [1-213]
Gene Ontology annotations:
Molecular Function (MF): GO:0003674 (molecular function), GO:0003824 (catalytic activity), GO:0016829 (lyase activity), GO:0016835 (carbon-oxygen lyase activity), GO:0016836 (hydro-lyase activity)
Biological Process (BP): GO:0008150 (biological process), GO:0022414 (reproductive process), GO:0032502 (developmental process), GO:0040007 (growth), GO:0009987 (cellular process), GO:0000003 (reproduction), GO:0032501 (multicellular organismal process), GO:0048869 (cellular developmental process), GO:0048589 (developmental growth), GO:0048856 (anatomical structure development), GO:0007275 (multicellular organism development), GO:0009653 (anatomical structure morphogenesis), GO:0016049 (cell growth), GO:0022412 (cellular process involved in reproduction in multicellular organism), GO:0032504 (multicellular organism reproduction), GO:0003006 (developmental process involved in reproduction), GO:0009791 (post-embryonic development), GO:0000902 (cell morphogenesis), GO:0048316 (seed development), GO:0090378 (seed trichome elongation), GO:0009888 (tissue development), GO:0048468 (cell development), GO:0060560 (developmental growth involved in morphogenesis), GO:0030154 (cell differentiation), GO:0009826 (unidimensional cell growth), GO:0048731 (system development), GO:0090376 (seed trichome differentiation), GO:0048608 (reproductive structure development), GO:0061458 (reproductive system development), GO:0000904 (cell morphogenesis involved in differentiation), GO:0090558 (plant epidermis development), GO:0010026 (trichome differentiation), GO:0010154 (fruit development)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0005737 (cytoplasm), GO:0043229 (intracellular organelle), GO:0043227 (membrane-bounded organelle), GO:0043231 (intracellular membrane-bounded organelle), GO:0005634 (nucleus)
Protein: Transcription factor MafB (Maf-B) (Transcription factor Val) (Valentino) (Q98UK5)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Function: May act as a transcriptional activator or repressor. Involved in neurogenesis. Involved in the development of rhombomeres (r) 5 and 6 segments from their common precursor 'proto-segment' in the hindbrain.
Subcellular location: Nucleus {ECO:0000255|PROSITE-ProRule:PRU00978}.
Sequence: MSADLAMGPELPTSPLALEYVNDFDLMKFEVKKEAMAAHDRANIRQCNRLQPQGSVSSTPISTPCSSVPSSPSFSPTEQKNHLEELYWMPSGAYPQQIDPQTLSLTPEDAVEALIGATAHGHPPPPHVQQQLQAGAFDGYRGAHHHHGHAQQQQQQQPQHHHHQHQYGAIPHHPDDLSGHPGAHGHHPHHHHHHHHSQDPDSPSPTSPEQLHHRHHHHHHPHGHPGQQGHHGVGGGLNVEDRFSDDQLVTMSVRELNRHLRGFTKDEVIRLKQKRRTLKNRGYAQSCRFKRVQQKHLLENEKTQLINQVEQLKQEINRLARERDAYKLKCEKLTGANGFREAGSTSDNPSSPEFFM
InterPro domains: - IPR046347: Basic-leucine zipper domain superfamily (homologous_superfamily) [271-325]
- IPR013592: Maf transcription factor, N-terminal (domain) [81-116]
- IPR024874: Transcription factor Maf family (family) [5-347]
- IPR004827: Basic-leucine zipper domain (domain) [266-333]
- IPR004826: Basic leucine zipper domain, Maf-type (domain) [243-333]
- IPR008917: Transcription factor, Skn-1-like, DNA-binding domain superfamily (homologous_superfamily) [243-283]
Interaction partners: - Early growth response protein 2b
- Homeobox protein Hox-B1a
- E3 SUMO-protein ligase EGR2a isoform 1
- Protein c-Fos
Gene Ontology annotations:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0097159 (organic cyclic compound binding), GO:1901363 (heterocyclic compound binding), GO:0003676 (nucleic acid binding), GO:0003677 (DNA binding), GO:0043565 (sequence-specific DNA binding)
Biological Process (BP): GO:0008150 (biological process), GO:0032502 (developmental process), GO:0002376 (immune system process), GO:0009987 (cellular process), GO:0032501 (multicellular organismal process), GO:0042592 (homeostatic process), GO:0048869 (cellular developmental process), GO:0048856 (anatomical structure development), GO:0048871 (multicellular organismal-level homeostasis), GO:0002262 (myeloid cell homeostasis), GO:0034101 (erythrocyte homeostasis), GO:0048468 (cell development), GO:0030154 (cell differentiation), GO:0048872 (homeostasis of number of cells), GO:0030097 (hemopoiesis), GO:0030218 (erythrocyte differentiation), GO:0030099 (myeloid cell differentiation)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0043229 (intracellular organelle), GO:0043227 (membrane-bounded organelle), GO:0043231 (intracellular membrane-bounded organelle), GO:0005634 (nucleus)
Protein: O-acyltransferase (Q0QJI1)
Organism: Vernicia fordii (Tung) (Aleurites fordii)
Function: Not known
Subcellular location: Endoplasmic reticulum membrane {ECO:0000256|ARBA:ARBA00004477, ECO:0000256|PIRNR:PIRNR000439}; Multi-pass membrane protein {ECO:0000256|ARBA:ARBA00004477, ECO:0000256|PIRNR:PIRNR000439}.
Sequence: MTIPETPDNSTDATTSGGAESSSDLNLSLRRRRTASNSDGAVAELASKIDELESDAGGGQVIKDPGAEMDSGTLKSNGKDCGTVKDRIENRENRGGSDVKFTYRPSVPAHRALKESPLSSDNIFKQSHAGLFNLCIVVLVAVNSRLIIENIMKYGWLIKTGFWFSSRSLRDWPLLMCCLTLPIFSLAAYLVEKLACRKYISAPTVVFLHILFSSTAVLYPVSVILSCESAVLSGVALMLFACIVWLKLVSYAHTNFDMRAIANSVDKGDALSNASSAESSHDVSFKSLVYFMVAPTLCYQPSYPRTASIRKGWVVRQFVKLIIFTGFMGFIIEQYINPIVQNSQHPLKGDLLYAIERVLKLSVPNLYVWLCMFYCFFHLWLNILAELLRFGDREFYKDWWNARTVEEYWRMWNMPVHKWMVRHIYFPCLRHKIPRGVALLITFFVSAVFHELCIAVPCHIFKLWAFIGIMFQIPLVGITNYLQNKFRSSMVGNMIFWFIFCILGQPMCLLLYYHDLMNRKGTTESR
InterPro domains: - IPR027251: Diacylglycerol O-acyltransferase 1 (family) [5-525]
- IPR004299: Membrane bound O-acyl transferase, MBOAT (family) [268-511]
- IPR014371: Sterol O-acyltransferase, ACAT/DAG/ARE types (family) [6-524]
Gene Ontology annotations:
Molecular Function (MF): GO:0003674 (molecular function), GO:0003824 (catalytic activity), GO:0016740 (transferase activity), GO:0016746 (acyltransferase activity), GO:0016747 (acyltransferase activity, transferring groups other than amino-acyl groups), GO:0008374 (O-acyltransferase activity), GO:0016411 (acylglycerol O-acyltransferase activity), GO:0004144 (diacylglycerol O-acyltransferase activity)
Biological Process (BP): GO:0008150 (biological process), GO:0008152 (metabolic process), GO:0009987 (cellular process), GO:0009058 (biosynthetic process), GO:0044237 (cellular metabolic process), GO:0071704 (organic substance metabolic process), GO:0044238 (primary metabolic process), GO:0044255 (cellular lipid metabolic process), GO:0044249 (cellular biosynthetic process), GO:1901576 (organic substance biosynthetic process), GO:0006629 (lipid metabolic process), GO:0006638 (neutral lipid metabolic process), GO:0046460 (neutral lipid biosynthetic process), GO:0046486 (glycerolipid metabolic process), GO:0008610 (lipid biosynthetic process), GO:0045017 (glycerolipid biosynthetic process), GO:0046463 (acylglycerol biosynthetic process), GO:0006639 (acylglycerol metabolic process), GO:0006641 (triglyceride metabolic process), GO:0019432 (triglyceride biosynthetic process)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0016020 (membrane), GO:0005737 (cytoplasm), GO:0012505 (endomembrane system), GO:0031984 (organelle subcompartment), GO:0042175 (nuclear outer membrane-endoplasmic reticulum membrane network), GO:0031090 (organelle membrane), GO:0005783 (endoplasmic reticulum), GO:0043229 (intracellular organelle), GO:0043227 (membrane-bounded organelle), GO:0098827 (endoplasmic reticulum subcompartment), GO:0043231 (intracellular membrane-bounded organelle), GO:0005789 (endoplasmic reticulum membrane)
Protein: Basal-body rod modification protein FlgD (P75936)
Organism: Escherichia coli (strain K12)
Function: Required for flagellar hook formation. May act as a scaffolding protein.
Sequence: MSIAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNGGTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQII
InterPro domains: - IPR025965: FlgD/Vpr, Ig-like domain (domain) [119-189]
- IPR005648: Flagellar hook capping protein (family) [8-78]
- IPR025963: FlgD Tudor-like domain (domain) [87-228]
Interaction partners: - Flagellar basal-body rod protein FlgF
- Flagella basal body P-ring formation protein FlgA
- Flagellar hook-associated protein 3
- Flagellar hook protein FlgE
- Flagellar M-ring protein
- Flagellar basal-body rod protein FlgC
- Flagellar P-ring protein
- Flagellar hook-length control protein
- Flagellar basal-body rod protein FlgG
- Flagellar hook-associated protein 1
Gene Ontology annotations:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0005515 (protein binding)
Biological Process (BP): GO:0008150 (biological process), GO:0009987 (cellular process), GO:0051179 (localization), GO:0051234 (establishment of localization), GO:0051641 (cellular localization), GO:0055085 (transmembrane transport), GO:0140352 (export from cell), GO:0033036 (macromolecule localization), GO:0070727 (cellular macromolecule localization), GO:0032940 (secretion by cell), GO:0045184 (establishment of protein localization), GO:0071806 (protein transmembrane transport), GO:0006810 (transport), GO:0030254 (protein secretion by the type III secretion system), GO:0035592 (establishment of protein localization to extracellular region), GO:0071702 (organic substance transport), GO:0046903 (secretion), GO:0071705 (nitrogen compound transport), GO:0008104 (protein localization), GO:0009306 (protein secretion), GO:0015031 (protein transport), GO:0071692 (protein localization to extracellular region)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0071944 (cell periphery), GO:0016020 (membrane), GO:0005886 (plasma membrane)
Protein: Cyclin-dependent kinase D-3 (CDKD;3) (EC 2.7.11.22) (EC 2.7.11.23) (CDK-activating kinase 2-At) (CAK2-At) (Q9LMT0)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: May form a stable complex with cyclin CYCH1-1 that phosphorylates human CDK2 and the C-terminal domain (CTD) of the large subunit of RNA polymerase II.
Subcellular location: Nucleus {ECO:0000269|PubMed:15486101}.
Sequence: MPEQPKKVADRYLKQEVLGQGTYGVVFKATDTKTEQTVAIKKIRLGKQREGVNITALREIKMLKELKHPHIILLIDAFPHKENLHLVFEFMETDLEAVIRDSNIFLSPADIKSYLLMTFKGLAYCHDKWVLHRDMKPNNLLIGVDGQLKLADFGLARIFGSPNRKFTHQVFARWYRAPELLFGAKQYGAAVDVWAVACIFAELLLRRPFLQGNSDIDQLSKIFAAFGTPKADQWPDLTKLPDYVEYQFVPAPSLRSLFPAVSDDALDLLSKMFTYDPKARISIKQALEHRYFTSAPAPTDPAKLPKPVPKQDGKSSYGKHEAITVQSPPRKLRRVMPERGRVDSLKSHVDKDQQAPMSLDFTILAERPPNRPTITSADRSHLKRKLDLEFQ
InterPro domains: - IPR011009: Protein kinase-like domain superfamily (homologous_superfamily) [7-299]
- IPR037770: Cyclin-dependent kinase 7 (family) [11-305]
- IPR008271: Serine/threonine-protein kinase, active site (active_site) [130-142]
- IPR050108: Cyclin-dependent kinase (family) [10-296]
- IPR017441: Protein kinase, ATP binding site (binding_site) [18-42]
- IPR000719: Protein kinase domain (domain) [12-292]
Interaction partners: - Cyclin-H1-1
- General transcription and DNA repair factor IIH subunit TFB4
- Pentatricopeptide repeat-containing protein At4g30825
- General transcription factor IIH subunit 2
- General transcription and DNA repair factor IIH subunit TFB2
- General transcription and DNA repair factor IIH helicase subunit XPD
- General transcription and DNA repair factor IIH subunit TFB1-1
- General transcription and DNA repair factor IIH subunit TFB1-3
- General transcription and DNA repair factor IIH helicase/translocase subunit XPB1
- General transcription and DNA repair factor IIH helicase/translocase subunit XPB2
Gene Ontology annotations:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0005515 (protein binding)
Biological Process (BP): GO:0008150 (biological process), GO:0032502 (developmental process), GO:0050789 (regulation of biological process), GO:0009987 (cellular process), GO:0065007 (biological regulation), GO:0048869 (cellular developmental process), GO:0050794 (regulation of cellular process), GO:0051726 (regulation of cell cycle), GO:0030154 (cell differentiation)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0043229 (intracellular organelle), GO:0043227 (membrane-bounded organelle), GO:0043231 (intracellular membrane-bounded organelle), GO:0005634 (nucleus)
Protein: Cobalamin binding intrinsic factor (Gastric intrinsic factor) (Intrinsic factor) (IF) (INF) (P52787)
Organism: Mus musculus (Mouse)
Function: Promotes absorption of the essential vitamin cobalamin (Cbl) in the ileum. After interaction with CUBN, the CBLIF-cobalamin complex is internalized via receptor-mediated endocytosis (By similarity).
Subcellular location: Secreted.
Sequence: MAWLTLYLLSVLWAVAGTSTRAQSSCSVPPDQQPWVDGLQALMENSVTDSDFPNPSILIAMNLAGAYNVEAQKLLTYQLMASDSADLTSGQLALTVMALTSSCRDPGSKVSTLLKKMENWSPSSPGAESSAFYGPGLAILALCQKSSEATLPIAVRFAKTLMMEPSPFNVDTGAVATLALTCMYNKIPVGSQENYRDLFGQALKAIVEKISLRIKADGIIGDIYSTGLAMQALSVTPEQPTKKWDCEKTMHTILNEIKQGKFQNPMSIAQILPSLKGKTYLDVPQVTCGPDHEVPPTLTDYPTPVPTSVSNITVIYTINNQLRGVDLLFNVTIEVSVKSGSVLLAVLEEAQRKNSMFKFETTMTSWGLIVSSINNIAENVNHKTYWEFLSGKTPLDEGVAYYIPFNHEHITANFTQY
InterPro domains: - IPR051588: Eukaryotic Cobalamin Transport (family) [1-417]
- IPR002157: Cobalamin (vitamin B12)-binding protein (family) [9-307]
Interaction partners: - Cubilin
- Potassium-transporting ATPase subunit beta
- Trefoil factor 2
- Protein amnionless
Gene Ontology annotations:
Molecular Function (MF): GO:0003674 (molecular function), GO:0098772 (molecular function regulator activity), GO:0005488 (binding), GO:0036094 (small molecule binding), GO:0097159 (organic cyclic compound binding), GO:1901363 (heterocyclic compound binding), GO:0019842 (vitamin binding), GO:0046906 (tetrapyrrole binding), GO:0031419 (cobalamin binding)
Biological Process (BP): GO:0008150 (biological process), GO:0008152 (metabolic process), GO:0009987 (cellular process), GO:0044281 (small molecule metabolic process), GO:0044237 (cellular metabolic process), GO:0006807 (nitrogen compound metabolic process), GO:0071704 (organic substance metabolic process), GO:0046483 (heterocycle metabolic process), GO:0006725 (cellular aromatic compound metabolic process), GO:1901360 (organic cyclic compound metabolic process), GO:1901564 (organonitrogen compound metabolic process), GO:0006766 (vitamin metabolic process), GO:0006767 (water-soluble vitamin metabolic process), GO:0033013 (tetrapyrrole metabolic process), GO:0009235 (cobalamin metabolic process)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0098552 (side of membrane), GO:0009986 (cell surface), GO:0071944 (cell periphery), GO:0016020 (membrane), GO:0005576 (extracellular region), GO:0005615 (extracellular space), GO:0009897 (external side of plasma membrane), GO:0005886 (plasma membrane)
Protein: Uncharacterized protein (Q386U0)
Organism: Trypanosoma brucei brucei (strain 927/4 GUTat10.1)
Function: Not known
Subcellular location: Mitochondrion inner membrane {ECO:0000256|ARBA:ARBA00004273}.
Sequence: MSEQRVSQPKTPVSNEEKWDHSLENFFRKTTLGLAYSILPAFLLARSAAARGAILMFATGIGSGIAYGEARYLFDHDVVFDRRHLVHIELLKPKESKIN
InterPro domains: - IPR007512: MICOS complex subunit Mic10 (family) [4-87]
Interaction partners: - Rhodanese domain-containing protein
- Uncharacterized protein
- Uncharacterized protein
- Uncharacterized protein
- MICOS complex subunit MIC10
- Transmembrane protein
- Mitochondrial fission process protein 1
- Thioredoxin domain-containing protein
Gene Ontology annotations:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0005515 (protein binding)
Biological Process (BP): GO:0008150 (biological process), GO:0008152 (metabolic process), GO:0009987 (cellular process), GO:0071840 (cellular component organization or biogenesis), GO:0044237 (cellular metabolic process), GO:0016043 (cellular component organization), GO:0044085 (cellular component biogenesis), GO:0006091 (generation of precursor metabolites and energy), GO:0043933 (protein-containing complex organization), GO:0015980 (energy derivation by oxidation of organic compounds), GO:0006996 (organelle organization), GO:0022900 (electron transport chain), GO:0022607 (cellular component assembly), GO:0065003 (protein-containing complex assembly), GO:0007005 (mitochondrion organization), GO:0045333 (cellular respiration), GO:0022904 (respiratory electron transport chain), GO:0033108 (mitochondrial respiratory chain complex assembly), GO:0019646 (aerobic electron transport chain), GO:0009060 (aerobic respiration), GO:0017004 (cytochrome complex assembly), GO:0042773 (ATP synthesis coupled electron transport), GO:0008535 (respiratory chain complex IV assembly), GO:0033617 (mitochondrial cytochrome c oxidase assembly), GO:0006119 (oxidative phosphorylation), GO:0006120 (mitochondrial electron transport, NADH to ubiquinone), GO:0042775 (mitochondrial ATP synthesis coupled electron transport)
Cellular Component (CC): GO:0005575 (cellular component), GO:0032991 (protein-containing complex), GO:0110165 (cellular anatomical entity), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0098798 (mitochondrial protein-containing complex), GO:0031975 (envelope), GO:0016020 (membrane), GO:0005737 (cytoplasm), GO:0098796 (membrane protein complex), GO:0031090 (organelle membrane), GO:0031967 (organelle envelope), GO:0005739 (mitochondrion), GO:0043229 (intracellular organelle), GO:0098800 (inner mitochondrial membrane protein complex), GO:0043227 (membrane-bounded organelle), GO:0005740 (mitochondrial envelope), GO:0019866 (organelle inner membrane), GO:0043231 (intracellular membrane-bounded organelle), GO:0031966 (mitochondrial membrane), GO:0005743 (mitochondrial inner membrane)
Protein: Noelin-2a (Olfactomedin 2) (Q803W5)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Function: Not known
Subcellular location: Secreted {ECO:0000256|ARBA:ARBA00004613}. Synapse {ECO:0000256|ARBA:ARBA00034103}.
Sequence: MKFDHSIKQALYPSPEEGWQIYSSAQDADGKCICTVVAPAQNMCNRDPRSRQLRQLMEKVQNITQSMEVLDLRTYRDLQYVRDTENLMKTVDGKLKTASENPRSLNPKSFQELKDKVTQLLPLLPVLEQYKADARMILRLREEVRNLSLVLMAIQEEMGAYDYEELRQRVLLLETRLHSCMQKLGCGKLTGVSNPITVRASGSRFGSWMTDTMIPSSDNRVWSMDGYFKGRRVLEYRTMNDFMKGQNFVQHLLPHPWAGTGHVVYNGSLYYNKYQSNILIKYHFRSRSVLVQRSLSGAGYNNTFPYSWGGSSDIDLMADENGLWAVYTTIPNAGNIVISRLEPQSLEVLQTWDTGFPKRSAGESFMICGTLYVTNSHLAGAKIYFAYYTNTSTYEYTDIPFHNQYSHISMMDYNPRERVLYTWNNGHQVLYNVTLFQVIKTAED
InterPro domains: - IPR050605: Olfactomedin-like domain-containing protein (family) [21-434]
- IPR022082: Noelin domain (domain) [13-112]
- IPR003112: Olfactomedin-like domain (domain) [185-437]
Gene Ontology annotations:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0005515 (protein binding)
Biological Process (BP): GO:0008150 (biological process), GO:0032502 (developmental process), GO:0009987 (cellular process), GO:0048869 (cellular developmental process), GO:0048856 (anatomical structure development), GO:0009888 (tissue development), GO:0048468 (cell development), GO:0030154 (cell differentiation), GO:0048513 (animal organ development), GO:0048762 (mesenchymal cell differentiation), GO:0048863 (stem cell differentiation), GO:0048864 (stem cell development), GO:0060485 (mesenchyme development), GO:0014033 (neural crest cell differentiation), GO:0014032 (neural crest cell development)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0071944 (cell periphery), GO:0016020 (membrane), GO:0005886 (plasma membrane)
Protein: Large ribosomal subunit protein uL1z (60S ribosomal protein L10a-1) (Q8VZB9)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Not known
Sequence: MSKLQSEAVREAITTITGKSEAKKRNFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICMLGDAQHVEEAEKMGLENMDVESLKKLNKNKKLVKKLAKKYHAFLASESVIKQIPRLLGPGLNKAGKFPTLVSHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPPQRIF
InterPro domains: - IPR023673: Large ribosomal subunit protein uL1, conserved site (conserved_site) [116-135]
- IPR023674: Ribosomal protein uL1-like (homologous_superfamily) [20-216]
- IPR028364: Ribosomal protein uL1/ribosomal biogenesis protein (family) [9-215]
- IPR050257: Large ribosomal subunit protein eL8/uL1-like (family) [11-209]
- IPR016095: Large ribosomal subunit protein uL1, 3-layer alpha/beta-sandwich domain (homologous_superfamily) [65-154]
- IPR002143: Large ribosomal subunit protein uL1 (family) [1-216]
Interaction partners: - Large ribosomal subunit protein uL22z
- Large ribosomal subunit protein uL22y
- Large ribosomal subunit protein eL13z
- Large ribosomal subunit protein eL31x
- Large ribosomal subunit protein eL8z
- Large ribosomal subunit protein uL23y
- Large ribosomal subunit protein uL2x
- Large ribosomal subunit protein eL38z/eL38y
- Large ribosomal subunit protein uL30y
- Large ribosomal subunit protein eL37y
Gene Ontology annotations:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005198 (structural molecule activity), GO:0003735 (structural constituent of ribosome)
Biological Process (BP): GO:0008150 (biological process), GO:0032502 (developmental process), GO:0032501 (multicellular organismal process), GO:0048856 (anatomical structure development), GO:0007275 (multicellular organism development), GO:0009791 (post-embryonic development), GO:0099402 (plant organ development), GO:0048731 (system development), GO:0090696 (post-embryonic plant organ development)
Cellular Component (CC): GO:0005575 (cellular component), GO:0032991 (protein-containing complex), GO:0110165 (cellular anatomical entity), GO:1990904 (ribonucleoprotein complex), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0005829 (cytosol), GO:0005737 (cytoplasm), GO:0044391 (ribosomal subunit), GO:0042579 (microbody), GO:0005844 (polysome), GO:0043229 (intracellular organelle), GO:0022626 (cytosolic ribosome), GO:0043227 (membrane-bounded organelle), GO:0043228 (non-membrane-bounded organelle), GO:0042788 (polysomal ribosome), GO:0043231 (intracellular membrane-bounded organelle), GO:0005777 (peroxisome), GO:0015934 (large ribosomal subunit), GO:0043232 (intracellular non-membrane-bounded organelle), GO:0022625 (cytosolic large ribosomal subunit), GO:0005840 (ribosome)