wanglab/bioreason-pro-rl-reasoning-data huggingface dataset:
Protein: Lysozyme-like protein 3 (Q9XXS1)
Organism: Caenorhabditis elegans
Function: Plays a role in the stress response to heavy metals such as copper, probably in a kgb-1-dependent manner.
Sequence: MKLFALLVSITLCYSFPAPLQTNVSEPFGLLQKVSEQVIDPDYNIPEVKDAPAIPYDERNSPTHAYSVDISFHTTPSDMDCLRDQGYKSVFVRALNPIGNTYFDRNALNTINNAFEAGLGSEVYITPNINSTRSGADQISLVYQNLLANGINVRSIWIQVTSPTNWVAPMAVRIEFIQDMIRSAKNLGLSVGIYTSFYDWLEITGGWNTFSSDVFLWYWHVLSMGTDGETTPTLEDFRPFGPWRQATVKQFGQVEKLCGMIVNRNVYSTGNQHLSQIVHFSTHQENSSSEKKLIRVGGIGF
InterPro domains: - IPR002053: Glycoside hydrolase, family 25 (family) [64-282]
- IPR017853: Glycoside hydrolase superfamily (homologous_superfamily) [66-277]
- IPR051595: Glycosyl Hydrolase 25 Enzymes (family) [61-291]
Interaction partners: - Protein kreg-1
- Invertebrate-type lysozyme 3
- Invertebrate-type lysozyme 2
Gene Ontology annotations:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0005515 (protein binding)
Biological Process (BP): GO:0008150 (biological process), GO:0050896 (response to stimulus), GO:0002376 (immune system process), GO:0044419 (biological process involved in interspecies interaction between organisms), GO:0009605 (response to external stimulus), GO:0051707 (response to other organism), GO:0006955 (immune response), GO:0009607 (response to biotic stimulus), GO:0006950 (response to stress), GO:0006952 (defense response), GO:0045087 (innate immune response), GO:0098542 (defense response to other organism), GO:0043207 (response to external biotic stimulus)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0045177 (apical part of cell), GO:0005737 (cytoplasm), GO:0031410 (cytoplasmic vesicle), GO:0043229 (intracellular organelle), GO:0043227 (membrane-bounded organelle), GO:0031982 (vesicle), GO:0043231 (intracellular membrane-bounded organelle), GO:0097708 (intracellular vesicle)
Protein: Mitochondrial import receptor subunit TOM5 homolog (Q8N4H5)
Organism: Homo sapiens (Human)
Function: Not known
Subcellular location: Mitochondrion outer membrane {ECO:0000269|PubMed:18331822}; Single-pass membrane protein {ECO:0000269|PubMed:18331822}.
Sequence: MFRIEGLAPKLDPEEMKRKMREDVISSIRNFLIYVALLRVTPFILKKLDSI
InterPro domains: - IPR019603: Mitochondrial outer membrane translocase complex, subunit Tom5 (family) [1-48]
- IPR029179: Mitochondrial import receptor subunit TOM5, metazoa (family) [1-51]
Interaction partners: - Mitochondrial import receptor subunit TOM7 homolog
- Mitochondrial import receptor subunit TOM6 homolog
- Mitochondrial import receptor subunit TOM40 homolog
- Mitochondrial import receptor subunit TOM22 homolog
- Mitochondrial import receptor subunit TOM70
- Mitochondrial import receptor subunit TOM20 homolog
- Mitofusin-1
- Stress-70 protein, mitochondrial
- MICOS complex subunit MIC13
- Mitochondrial import receptor subunit TOM40B
Gene Ontology annotations:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0005515 (protein binding)
Biological Process (BP): GO:0008150 (biological process), GO:0009987 (cellular process), GO:0051179 (localization), GO:0051234 (establishment of localization), GO:0051641 (cellular localization), GO:0071840 (cellular component organization or biogenesis), GO:0033036 (macromolecule localization), GO:0070727 (cellular macromolecule localization), GO:0051649 (establishment of localization in cell), GO:0016043 (cellular component organization), GO:0046907 (intracellular transport), GO:0045184 (establishment of protein localization), GO:0006810 (transport), GO:0006839 (mitochondrial transport), GO:0071702 (organic substance transport), GO:0006886 (intracellular protein transport), GO:0071705 (nitrogen compound transport), GO:0008104 (protein localization), GO:0006996 (organelle organization), GO:0015031 (protein transport), GO:0072594 (establishment of protein localization to organelle), GO:0072655 (establishment of protein localization to mitochondrion), GO:0007005 (mitochondrion organization), GO:0033365 (protein localization to organelle), GO:0006605 (protein targeting), GO:0006626 (protein targeting to mitochondrion), GO:0070585 (protein localization to mitochondrion)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0005737 (cytoplasm), GO:0043229 (intracellular organelle), GO:0005739 (mitochondrion), GO:0043227 (membrane-bounded organelle), GO:0043231 (intracellular membrane-bounded organelle)
Protein: ribose-phosphate diphosphokinase (EC 2.7.6.1) (Q5ALK3)
Organism: Candida albicans (strain SC5314 / ATCC MYA-2876) (Yeast)
Function: Not known
Sequence: MSTNSIKLLASDVHRGLAELVSKRLGLRLTPSELKRESTGEVQFSIGESVRDEDIFIICQIGSGEVNDRVFELMIMINACKTASARRITVILPNFPYARQDRKDKSRAPITAKLMADMLTTAGCDHVITMDLHASQIQGFFDVPVDNLYAEPSVVRYIKETIDYSEAIIISPDAGGAKRAAGLADRLDLNFALIHKERARANEVSRMVLVGDVTDKICVIVDDMADTCGTLAKAAEVLLDNNAKDVIAIVTHGILSGNAIKNINNSKLKKVVCTNTVPFEDKLKLCPKLDTIDISAVIAESIRRLHNGESISYLFKNAPL
InterPro domains: - IPR000842: Phosphoribosyl pyrophosphate synthetase, conserved site (conserved_site) [131-146]
- IPR000836: Phosphoribosyltransferase domain (domain) [154-276]
- IPR029057: Phosphoribosyltransferase-like (homologous_superfamily) [13-308]
- IPR029099: Ribose-phosphate pyrophosphokinase, N-terminal domain (domain) [6-123]
- IPR005946: Ribose-phosphate pyrophosphokinase (family) [5-317]
Interaction partners: - ribose-phosphate diphosphokinase
- Amidophosphoribosyltransferase
- Ribose-phosphate pyrophosphokinase 1
- Transketolase
- Ribokinase
- Ribose-5-phosphate isomerase
- Phosphoribomutase
- phosphoglucomutase
- ADP-ribose diphosphatase
- ATP phosphoribosyltransferase
Gene Ontology annotations:
Molecular Function (MF): GO:0003674 (molecular function), GO:0003824 (catalytic activity), GO:0016740 (transferase activity), GO:0016772 (transferase activity, transferring phosphorus-containing groups), GO:0016778 (diphosphotransferase activity)
Biological Process (BP): GO:0008150 (biological process), GO:0008152 (metabolic process), GO:0009987 (cellular process), GO:0065007 (biological regulation), GO:0065008 (regulation of biological quality), GO:0071840 (cellular component organization or biogenesis), GO:0009058 (biosynthetic process), GO:0044237 (cellular metabolic process), GO:0071704 (organic substance metabolic process), GO:0071554 (cell wall organization or biogenesis), GO:0016043 (cellular component organization), GO:0071852 (fungal-type cell wall organization or biogenesis), GO:1901576 (organic substance biosynthetic process), GO:0071555 (cell wall organization), GO:0090066 (regulation of anatomical structure size), GO:0019637 (organophosphate metabolic process), GO:1901135 (carbohydrate derivative metabolic process), GO:0006793 (phosphorus metabolic process), GO:0032535 (regulation of cellular component size), GO:0006796 (phosphate-containing compound metabolic process), GO:0031505 (fungal-type cell wall organization), GO:0045229 (external encapsulating structure organization), GO:1901137 (carbohydrate derivative biosynthetic process), GO:0019693 (ribose phosphate metabolic process), GO:0090407 (organophosphate biosynthetic process), GO:0046390 (ribose phosphate biosynthetic process), GO:0008361 (regulation of cell size)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0071944 (cell periphery), GO:0030312 (external encapsulating structure), GO:0031012 (extracellular matrix), GO:0062039 (biofilm matrix), GO:0062040 (fungal biofilm matrix)
Protein: Trigger factor (TF) (EC 5.2.1.8) (PPIase) (C4ZTJ3)
Organism: Escherichia coli (strain K12 / MC4100 / BW2952)
Function: Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase.
Subcellular location: Cytoplasm. Note=About half TF is bound to the ribosome near the polypeptide exit tunnel while the other half is free in the cytoplasm. {ECO:0000255|HAMAP-Rule:MF_00303}.
Sequence: MQVSVETTQGLGRRVTITIAADSIETAVKSELVNVAKKVRIDGFRKGKVPMNIVAQRYGASVRQDVLGDLMSRNFIDAIIKEKINPAGAPTYVPGEYKLGEDFTYSVEFEVYPEVELQGLEAIEVEKPIVEVTDADVDGMLDTLRKQQATWKEKDGAVEAEDRVTIDFTGSVDGEEFEGGKASDFVLAMGQGRMIPGFEDGIKGHKAGEEFTIDVTFPEEYHAENLKGKAAKFAINLKKVEERELPELTAEFIKRFGVEDGSVEGLRAEVRKNMERELKSAIRNRVKSQAIEGLVKANDIDVPAALIDSEIDVLRRQAAQRFGGNEKQALELPRELFEEQAKRRVVVGLLLGEVIRTNELKADEERVKGLIEEMASAYEDPKEVIEFYSKNKELMDNMRNVALEEQAVEAVLAKAKVTEKETTFNELMNQQA
InterPro domains: - IPR005215: Trigger factor (family) [1-432]
- IPR008880: Trigger factor, C-terminal (domain) [262-412]
- IPR027304: Trigger factor/SurA domain superfamily (homologous_superfamily) [248-429]
- IPR001179: FKBP-type peptidyl-prolyl cis-trans isomerase domain (domain) [158-249]
- IPR008881: Trigger factor, ribosome-binding, bacterial (domain) [1-144]
- IPR046357: Peptidyl-prolyl cis-trans isomerase domain superfamily (homologous_superfamily) [150-246]
- IPR036611: Trigger factor ribosome-binding domain superfamily (homologous_superfamily) [1-131]
- IPR037041: Trigger factor, C-terminal domain superfamily (homologous_superfamily) [116-417]
Gene Ontology annotations:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0044183 (protein folding chaperone), GO:0003824 (catalytic activity), GO:0044877 (protein-containing complex binding), GO:0016853 (isomerase activity), GO:0140096 (catalytic activity, acting on a protein), GO:0043021 (ribonucleoprotein complex binding), GO:0043022 (ribosome binding)
Biological Process (BP): GO:0008150 (biological process), GO:0050896 (response to stimulus), GO:0009987 (cellular process), GO:0009628 (response to abiotic stimulus), GO:0006950 (response to stress), GO:0006457 (protein folding), GO:0009408 (response to heat), GO:0009266 (response to temperature stimulus), GO:0006458 ('de novo' protein folding), GO:0061077 (chaperone-mediated protein folding)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0018995 (host cellular component), GO:0033643 (host cell part), GO:0043657 (host cell), GO:0033646 (host intracellular part), GO:0043656 (host intracellular region), GO:0030430 (host cell cytoplasm)
Protein: Interferon alpha-10 (IFN-alpha-10) (Interferon alpha-6L) (Interferon alpha-C) (LeIF C) (P01566)
Organism: Homo sapiens (Human)
Function: Produced by macrophages, IFN-alpha have antiviral activities. Interferon stimulates the production of two enzymes: a protein kinase and an oligoadenylate synthetase.
Subcellular location: Secreted.
Sequence: MALSFSLLMAVLVLSYKSICSLGCDLPQTHSLGNRRALILLGQMGRISPFSCLKDRHDFRIPQEEFDGNQFQKAQAISVLHEMIQQTFNLFSTEDSSAAWEQSLLEKFSTELYQQLNDLEACVIQEVGVEETPLMNEDSILAVRKYFQRITLYLIERKYSPCAWEVVRAEIMRSLSFSTNLQKRLRRKD
InterPro domains: - IPR000471: Interferon alpha/beta/delta (family) [1-187]
- IPR009079: Four-helical cytokine-like, core (homologous_superfamily) [21-189]
Interaction partners: - Interferon alpha-16
- Interferon alpha-17
- Interferon alpha/beta receptor 1
- Interferon alpha-14
- Interferon alpha-7
- Interleukin-2
- Interferon alpha-21
- Interferon alpha/beta receptor 2
- Interferon gamma receptor 1
- Tyrosine-protein kinase JAK2
Gene Ontology annotations:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0044877 (protein-containing complex binding), GO:0005515 (protein binding), GO:0005102 (signaling receptor binding), GO:0005126 (cytokine receptor binding)
Biological Process (BP): GO:0008150 (biological process), GO:0050896 (response to stimulus), GO:0044419 (biological process involved in interspecies interaction between organisms), GO:0009605 (response to external stimulus), GO:0009607 (response to biotic stimulus), GO:0051707 (response to other organism), GO:0009615 (response to virus), GO:0043207 (response to external biotic stimulus)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005576 (extracellular region)
Protein: LP10272p (Tetraspan membrane protein in hair cell stereocilia, isoform A) (Tetraspan membrane protein in hair cell stereocilia, isoform B) (Q9W068)
Organism: Drosophila melanogaster (Fruit fly)
Function: Not known
Subcellular location: Membrane {ECO:0000256|ARBA:ARBA00004141}; Multi-pass membrane protein {ECO:0000256|ARBA:ARBA00004141}.
Sequence: MGTKIEYVDTTHLYASKYIRNSKAIGVLWAIFTICYAIIGIVAFVTPEWIGDPDNDGAGRLGLWQQCQRDEIFDNCRRRWESIFEVPTFSFQLATFFMLGAIALALLTIFFLVCLLFMKSTRVFHLCGWMQIISAICMIVACAAFPFGWNSDDFRKICGPEANRFELGLCGIRWAYPLAIIGCIDGVVLATLAFILATRHVRLQPDPIYQNSLYKGEINNAYLTDAISLAGSRKSNPRITGLNLQPILLVAPPNEDSISQFSRYH
InterPro domains: - IPR019372: Lipoma HMGIC fusion partner-like protein (family) [10-204]
Interaction partners: - Cadherin-99C
Gene Ontology annotations:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0005515 (protein binding)
Biological Process (BP): GO:0008150 (biological process), GO:0009987 (cellular process), GO:0051179 (localization), GO:0045177 (apical part of cell), GO:0051234 (establishment of localization), GO:0051641 (cellular localization), GO:0071840 (cellular component organization or biogenesis), GO:0051649 (establishment of localization in cell), GO:0016043 (cellular component organization), GO:0044085 (cellular component biogenesis), GO:0046907 (intracellular transport), GO:0006810 (transport), GO:0016192 (vesicle-mediated transport), GO:0030030 (cell projection organization), GO:0006996 (organelle organization), GO:0022607 (cellular component assembly), GO:0070925 (organelle assembly), GO:0030031 (cell projection assembly), GO:0016050 (vesicle organization), GO:0120036 (plasma membrane bounded cell projection organization), GO:0044782 (cilium organization), GO:0060271 (cilium assembly), GO:0120031 (plasma membrane bounded cell projection assembly)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0071944 (cell periphery), GO:0016020 (membrane), GO:0030054 (cell junction), GO:0070161 (anchoring junction), GO:0005886 (plasma membrane), GO:0005911 (cell-cell junction), GO:0043296 (apical junction complex), GO:0070160 (tight junction), GO:0005918 (septate junction)
Protein: Phosphatidylinositol mannoside acyltransferase (PIM acyltransferase) (EC 2.3.1.265) (P9WMB5)
Organism: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Function: Catalyzes the transfer of a palmitoyl moiety from palmitoyl-CoA to the 6-position of the mannose ring linked to the 2-position of myo-inositol in phosphatidyl-myo-inositol monomannoside (PIM1) or dimannoside (PIM2). Essential for growth and survival in axenic cultures and during macrophage infection and in a mouse model of infection.
Subcellular location: Cell inner membrane {ECO:0000269|PubMed:12851411}; Peripheral membrane protein {ECO:0000250|UniProtKB:A0QWG5}; Cytoplasmic side {ECO:0000250|UniProtKB:A0QWG5}. Note=Permanently associated with the membrane. {ECO:0000250|UniProtKB:A0QWG5}.
Sequence: MIAGLKGLKLPKDPRSSVTRTATDWAYAAGWMAVRALPEFAVRNAFDTGARYFARHGGPEQLRKNLARVLGVPPAAVPDPLMCASLESYGRYWREVFRLPTINHRKLARQLDRVIGGLDHLDAALAAGLGAVLALPHSGNWDMAGMWLVQRHGTFTTVAERLKPESLYQRFIDYRESLGFEVLPLSGGERPPFEVLSERLRNNRVVCLMAERDLTRTGVEVDFFGEPTRMPVGPAKLAVETGAALLPTHCWFEGRGWGFQVYPALDCTSGDVAAITQALADRFAQNIAAHPADWHMLQPQWLADLSESRRAQLRSR
InterPro domains: - IPR004960: Bacterial lipid A biosynthesis acyltransferase (family) [12-308]
Interaction partners: - Phosphatidyl-myo-inositol mannosyltransferase
- GDP-mannose-dependent alpha-
- Phosphatidylinositol phosphate synthase
- AP-4-A phosphorylase
- Probable conserved membrane protein
- GDP-mannose-dependent alpha-mannosyltransferase
- Threonine--tRNA ligase
Gene Ontology annotations:
Molecular Function (MF): GO:0003674 (molecular function), GO:0003824 (catalytic activity), GO:0016740 (transferase activity), GO:0016746 (acyltransferase activity)
Biological Process (BP): GO:0008150 (biological process), GO:0008152 (metabolic process), GO:0009987 (cellular process), GO:0009058 (biosynthetic process), GO:0044237 (cellular metabolic process), GO:0071704 (organic substance metabolic process), GO:0044238 (primary metabolic process), GO:0044255 (cellular lipid metabolic process), GO:0044249 (cellular biosynthetic process), GO:1901576 (organic substance biosynthetic process), GO:0006629 (lipid metabolic process), GO:1901135 (carbohydrate derivative metabolic process), GO:1903509 (liposaccharide metabolic process), GO:1901137 (carbohydrate derivative biosynthetic process), GO:0046467 (membrane lipid biosynthetic process), GO:0008610 (lipid biosynthetic process), GO:0006643 (membrane lipid metabolic process), GO:0009247 (glycolipid biosynthetic process), GO:0006664 (glycolipid metabolic process)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0071944 (cell periphery), GO:0016020 (membrane), GO:0005886 (plasma membrane)
Protein: Metal-nicotianamine transporter YSL3 (Protein YELLOW STRIPE LIKE 3) (AtYSL3) (Q2EF88)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: May be involved in the lateral transport of nicotianamine-chelated metals in the vasculature.
Subcellular location: Membrane {ECO:0000305}; Multi-pass membrane protein {ECO:0000305}.
Sequence: MRSMMMEREGRNEIEREVIDDLEETQNEGDDFKSIPPWKEQITFRGIVASLIIGIIYSVIVMKLNLTTGLVPNLNVSAALLAFVFLRSWTKLLTKAGIVTKPFTKQENTVVQTCAVACYSIAVGGGFGSYLLGLNRITYEQSGGTHTDGNYPEGTKEPGIGWMTAFLFFTCFVGLLALVPLRKIMIIDYKLTYPSGTATAVLINGFHTPKGNKMAKKQVFGFVKYFSFSFIWAFFQWFFSGGTECGFIQFPTFGLEALKNTFYFDFSMTYVGAGMICPHIVNISLLFGAVLSWGIMWPLIKGLKGDWFPSTLPENSMKSLNGYKVFISISLILGDGLYQFIKILFKTGINMYVKLNNRNSGKSNSEKDKQSIADLKRDEIFVRDSIPLWVAAVGYAAFSVVSIIAIPIMFPELKWYFIVVAYMLAPSLGFSNAYGAGLTDMNMAYNYGKVALFILAAMAGKQNGVVAGLVGCGLIKSIVSISSDLMHDFKTGHLTLTSPRSMLVSQAIGTAIGCVVAPLTFFLFYKAFDVGNQEGEYKAPYALVYRNMAILGVEGFSALPQHCLQLCYGFFAFAVAANLVRDRLPDKIGNWVPLPMAMAVPFLVGGYFAIDMCVGSLIVFAWNMRDRVKAGLMVPAVASGLICGDGLWILPSSVLALAGVRPPICMGFMPSKYSS
InterPro domains: - IPR045035: Metal-nicotianamine transporter YSL-like (family) [24-670]
- IPR004813: Oligopeptide transporter, OPT superfamily (family) [37-655]
Interaction partners: - Oligopeptide transporter 3
- Metal transporter Nramp3
- Nicotianamine synthase 3
- Protein DETOXIFICATION 43
- Oligopeptide transporter 9
- Oligopeptide transporter 7
- Ferric reduction oxidase 2
- Oligopeptide transporter 1
- Oligopeptide transporter 8
- Oligopeptide transporter 2
Gene Ontology annotations:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005215 (transporter activity), GO:0022857 (transmembrane transporter activity), GO:0015075 (monoatomic ion transmembrane transporter activity), GO:0015318 (inorganic molecular entity transmembrane transporter activity), GO:0022890 (inorganic cation transmembrane transporter activity), GO:0008324 (monoatomic cation transmembrane transporter activity), GO:0046873 (metal ion transmembrane transporter activity), GO:0046915 (transition metal ion transmembrane transporter activity), GO:0005381 (iron ion transmembrane transporter activity)
Biological Process (BP): GO:0008150 (biological process), GO:0050896 (response to stimulus), GO:0042221 (response to chemical), GO:0010035 (response to inorganic substance), GO:0010038 (response to metal ion), GO:0010043 (response to zinc ion), GO:0010039 (response to iron ion)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0071944 (cell periphery), GO:0016020 (membrane), GO:0005886 (plasma membrane)
Protein: AT4g14420/dl3250c (Elicitor like protein) (HR-like lesion-inducing protein-like protein) (O23298)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Not known
Sequence: MELASFLGRALFVSVFLLSAWQEFNDFGEDGGRSAKSLKPKFNAFVNHVTTHTGQQLPPVDMKILVAAAIALKGIGGLLFVFGSSLGAYLLLLHQAVATPILYDFYNYDVDRKEFGQLFSKFTQSLALLGGLLFFIGMKNSRKHGRQLRKKAPKAKAN
InterPro domains: - IPR008637: HR-like lesion-inducer (family) [1-138]
Interaction partners: - At1g27330
- T29M8.11
- F-box/kelch-repeat protein At3g06240
- Large ribosomal subunit protein uL1c
- Protein STRICTOSIDINE SYNTHASE-LIKE 10
- Membrane protein of ER body 1
- At2g32380
- S-protein homolog 12
- Autophagy-related protein 8b
- At2g15220/F15A23.4
Gene Ontology annotations:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0005515 (protein binding)
Biological Process (BP): GO:0008150 (biological process), GO:0050896 (response to stimulus), GO:0006950 (response to stress), GO:0009628 (response to abiotic stimulus), GO:0006970 (response to osmotic stress), GO:0009651 (response to salt stress)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0005737 (cytoplasm), GO:0012505 (endomembrane system), GO:0043229 (intracellular organelle), GO:0005783 (endoplasmic reticulum), GO:0043227 (membrane-bounded organelle), GO:0043231 (intracellular membrane-bounded organelle)
Protein: YTH domain-containing family protein (Q56XH8)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Not known
Sequence: MATEKNTLDSEATFAQTVPALDSTTKKQDESPPKSTPSLTVTACANGSDVVSSQPNDNGQAHTTDFRKGNHRDKNSSDVYADSTLRGDRPKGSNCLSQTSFSAPKPLGNFNGAGRLPPNTQAHAFRPPFKGKEAAGQFLTFSNQKTSCVPYSGYINGNSNNGFWDQRDHNKKPERNGESDYLVELKCGPRANAKTRPPSESSPLKQNNSFALALRREMYNLPDFQTDYEDAKFFVIKSYSEDDVHKSIKYSVWSSTINGNKKLDAAFRDAETKTLEDGKKRPIFLFFSVNASRQFVGLAEMVGYVDFNKDLDFWQVDKWSGFFPVEWHVVKDIPNWELRHIILDNNEDKPVTHTRDTHEIKLKEGLQMLSIFKKYSAVTFLLDDMDFYEEREKSLRAKKEHKPATLRMDLFKEKDYDYEMEGNRRMNHQERGYNWNRSSNSKTQASLVNQTKYLSIRGYSGYKKNTGNST
InterPro domains: - IPR007275: YTH domain (domain) [231-373]
- IPR045168: YTH domain containing protein (family) [33-432]
Gene Ontology annotations:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0097159 (organic cyclic compound binding), GO:1901363 (heterocyclic compound binding), GO:0003676 (nucleic acid binding), GO:0003723 (RNA binding), GO:0003729 (mRNA binding)
Biological Process (BP): GO:0008150 (biological process), GO:0050896 (response to stimulus), GO:0050789 (regulation of biological process), GO:0065007 (biological regulation), GO:0009987 (cellular process), GO:0023052 (signaling), GO:0051716 (cellular response to stimulus), GO:0050794 (regulation of cellular process), GO:0007154 (cell communication), GO:0007165 (signal transduction), GO:0035556 (intracellular signal transduction), GO:0019932 (second-messenger-mediated signaling), GO:0019722 (calcium-mediated signaling)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0005737 (cytoplasm), GO:0043229 (intracellular organelle), GO:0043227 (membrane-bounded organelle), GO:0043231 (intracellular membrane-bounded organelle), GO:0005634 (nucleus)