Protein: Collagen type XI alpha-1b (D6MUD3)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Subcellular location: Secreted, extracellular space, extracellular matrix
Sequence: MDKDKERWSTRWKTKKCLRNSVLSAIFSLTFVLQATQVRAAEPVDVLKVLDFKSSPEGVKKTPGFCTIRRGSKPDVAYRVDKRAQISAPTKQLFPGGVFPEDFSILMTIKPKAGIQSFLLSVYNEQGIQQLGVEVGRSPLFLYEDQHGKPAPEDYPLFRAINLADGKWHRVAISIEKKTVTMIVDCKKKISKPLSRSDHAIINTDGIAIFGTRILDEEVFEGDIQQLLLVADPRAAYDYCEHYSPDCETPHQDTPQAQEPEEEYNPEYSDAYGFYEYTDEVTATENPTDNVRTDTKPSTVDTGDYYVEQDYGTEAPSVSNPANENPSPKEEIVDDYITGVEQVGVDATAATEESVKYVESKSTNGGETEDFKEYDLNTYDAKEIDPSNYDDSFYDYTNGVKPTGSTYEDEIGPGRPAETEVTESNVGGGYGGEKGQKGEPAVIEPGMLIEGPPGPPGPAGLPGTPGIQGSPGLHGDPGERGPPGRPGLPGGDGAPGPSGTILMLPFRAGGESSKGPVVSAQEAQAQAILAQARLTMRGPPGPMGLTGRSGPVGGPGAPGAKGESGDSGPQGPRGLQGPTGSPGKPGKRGRNGADGARGIPGESGAKGDRGFDGLPGLPGEKGHRGEQGPIGLPGSPGEDGPRGEDGEIGQRGMPGESGPRGLLGPRGSPGTAGQRGLTGLDGPPGPKGNMGPQGEPGPPGQQGNTGPHGLPGPQGPIGPPGEKGPAGKQGLHGLAGADGPPGHPGKEGPPGDKGAAGQPGPQGSIGYPGPRGVKGAEGVRGLKGGKGEKGEDGFPGFKGDMGLKGDKGEVGVIGPRGEDGPEGPKGKSGPSGEAGPMGTAGEKGKLGVPGLPGYPGRQGPKGSTGFIGFPGANGEKGGRGIAGKAGPRGQRGPTGPRGGRGARGPTGKPGAKGTSGNDGPSGGPGERGPQGPQGPVGLTGPKGPPGPPGKDGLPGHPGQRGETGFQGKTGPPGPGGVVGPQGSTGETGPVGERGHPGSPGPPGEQGLPGAAGKEGGKGDPGPQGISGKPGPAGLKGFPGQRGLPGAAGLSGLKGGEGPQGPQGPSGSPGERGPAGPGGPIGQTGRNGPQGPPGPAGEKGGPGEKGPAGPAGRDGIQGPVGLPGPAGPQGPPGEDGDKGEVGEPGQKGSKGDKGEHGPPGPAGPLGVVGAPGPAGSDGESGPRGQQGMFGQKGDEGPRGFPGLPGPVGLQGLPGPPGEKGENGDVGPMGPPGPPGPRGPQGSSGADGAPGPPGGIGAMGGNGEKGETGEAGNPGPPGEPGTLGPKGELGEKGEAGPPGAAGPAGGRGPPGDDGPKGNPGPIGFPGDPGPPGEPGVGGLDGLPGDKGDDGDAGQPGPPGPSGEAGSPGPPGKRGPAGPAGTEGRQGEKGAKGEAGAEGPGGKTGPVGPQGPPGKSGAEGLRGIPGPVGEQGLPGAAGQDGPPGPLGPPGLPGLKGDPGSKGEKGHPGLIGLIGPPGESGEKGDRGLQGPQGIGGGKGDAGPAGSSGPVGPPGPPGIPGTQGQKGSKGSTGPAGQKGEPGLIGPPGPPGPAGDIIQSLPLQMNKKAKRSPDVQDDEAAPIADYGMEGMEDVFGSLNTLKQDIERMKFPLGTQDNPSRTCKDLQLSQPDFPDGYYWIDPNMGCISDAFKVHCNFTAGGETCIYPDKKSSGVRISNWPKESPGSWFSEFKRGKILSYVDVEESSINSVQMTFLKLLSSSARQNFTYICHQSVAWYDAKADNYDKALRFLGSNDEEMSYDNNPFIKALSDGCSLKQGYSKSVMEINTPRIEQVPIIDVMLNDFGESSQRFGFEVGPVCFLG
InterPro domains: - IPR013320: Concanavalin A-like lectin/glucanase domain superfamily (homologous_superfamily) [42-247]
- IPR000885: Fibrillar collagen, C-terminal (domain) [1585-1814]
- IPR001791: Laminin G domain (domain) [160-221]
- IPR048287: Thrombospondin-like, N-terminal domain (domain) [43-233]
- IPR050149: Collagen superfamily (family) [595-949]
- IPR008160: Collagen triple helix repeat (repeat) [451-1549]
Interaction partners: - Myogenesis-regulating glycosidase
- Myosin-binding protein H
Gene Ontology annotations:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:1901681 (sulfur compound binding), GO:0097367 (carbohydrate derivative binding), GO:0008201 (heparin binding), GO:0005539 (glycosaminoglycan binding)
Biological Process (BP): GO:0008150 (biological process), GO:0032502 (developmental process), GO:0032501 (multicellular organismal process), GO:0048856 (anatomical structure development), GO:0007275 (multicellular organism development), GO:0009653 (anatomical structure morphogenesis), GO:0009887 (animal organ morphogenesis), GO:0048729 (tissue morphogenesis), GO:0009888 (tissue development), GO:0048731 (system development), GO:0048513 (animal organ development), GO:0051216 (cartilage development), GO:0001501 (skeletal system development), GO:0060536 (cartilage morphogenesis), GO:0061448 (connective tissue development)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0032991 (protein-containing complex), GO:0071944 (cell periphery), GO:0005581 (collagen trimer), GO:0030312 (external encapsulating structure), GO:0031012 (extracellular matrix), GO:0062023 (collagen-containing extracellular matrix)