wanglab/bioreason-pro-rl-reasoning-data huggingface dataset:
Protein: Peroxisomal biogenesis factor 11 beta (A0A8I5ZPC8)
Organism: Rattus norvegicus (Rat)
Function: Not known
Subcellular location: Peroxisome membrane {ECO:0000256|ARBA:ARBA00046271}.
Sequence: MGKLRAAQYACSLLGHALQRHGASPELQKQIRQLEGHLSLGRKLLRLGNSADALESAKRAVHLSDVVLRFCITVSHLNRALYFACDNVLWAGKSGLAPRVDQEKWAQRSFRYYLFSLIMNLSRDAYEIRLLMEQETSAHSRRMKISGVGVSGLETGGPGGPGTPGGCLPQLALKFRLRILLLARVLRDHPPLLLDVLRNACDLFIPLDKLGLWRCGPGIVGLCGLISSVLSILTLICPWLRLKP
InterPro domains: - IPR008733: Peroxisomal biogenesis factor 11 (family) [4-235]
Gene Ontology annotations:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0005515 (protein binding), GO:0042802 (identical protein binding), GO:0046983 (protein dimerization activity), GO:0042803 (protein homodimerization activity)
Biological Process (BP): GO:0008150 (biological process), GO:0009987 (cellular process), GO:0071840 (cellular component organization or biogenesis), GO:0016043 (cellular component organization), GO:0044085 (cellular component biogenesis), GO:0006996 (organelle organization), GO:0044091 (membrane biogenesis), GO:0007031 (peroxisome organization)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0005737 (cytoplasm), GO:0016020 (membrane), GO:0031090 (organelle membrane), GO:0042579 (microbody), GO:0043229 (intracellular organelle), GO:0043227 (membrane-bounded organelle), GO:0098588 (bounding membrane of organelle), GO:0031903 (microbody membrane), GO:0043231 (intracellular membrane-bounded organelle), GO:0005777 (peroxisome), GO:0005778 (peroxisomal membrane)
Protein: Probable glutathione-independent glyoxalase hsp3104 (EC 4.2.1.130) (Glyoxalase 3 homolog 4) (Heat shock protein 31 homolog 4) (Q10092)
Organism: Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Function: Catalyzes the conversion of methylglyoxal (MG) to D-lactate in a single glutathione (GSH)-independent step. May play a role in detoxifying endogenously produced glyoxals. Involved in protection against reactive oxygen species (ROS).
Subcellular location: Cytoplasm {ECO:0000269|PubMed:16823372}.
Sequence: MVLFMKTVQRPEHISLKSCIPFKSLQRQGIVFRLSVRMVMLADDHSISDSALSDSDKNAFKDKNNDFWKAIKNAKNASDINFSDYSIFFAAGGHGTLFDFPSATNLHKGAAKIYSMGGVIAAVCHGPVILPCIKDSTGFSIVKGKTVTAFNEIAEQQMNLMPTFEKYHFKTLNKLFQEAGSNFVDPQEPFDDFVKTDGKLVTGANPASAASTAKAALNSLNS
InterPro domains: - IPR002818: DJ-1/PfpI (domain) [75-215]
- IPR029062: Class I glutamine amidotransferase-like (homologous_superfamily) [19-221]
- IPR050325: Protein/nucleic acid deglycase (family) [62-221]
Interaction partners: - Probable hydroxyacylglutathione hydrolase SPCC13B11.03c
- Lactoylglutathione lyase
- Probable hydroxyacylglutathione hydrolase glo2
- Putative D-lactate dehydrogenase C713.03, mitochondrial
- 2-hydroxyacid dehydrogenase homolog 2
- Glutathione-independent glyoxalase DJ-1
- Probable nudix hydrolase C6G9.05
- Threonine dehydratase, mitochondrial
- Tryptophan synthase
- Copper amine oxidase 1
Gene Ontology annotations:
Molecular Function (MF): GO:0003674 (molecular function), GO:0003824 (catalytic activity), GO:0016829 (lyase activity), GO:0016835 (carbon-oxygen lyase activity), GO:0016836 (hydro-lyase activity)
Biological Process (BP): GO:0008150 (biological process), GO:0008152 (metabolic process), GO:0009987 (cellular process), GO:0044237 (cellular metabolic process), GO:0071704 (organic substance metabolic process), GO:0044281 (small molecule metabolic process), GO:0009056 (catabolic process), GO:0042180 (cellular ketone metabolic process), GO:1901615 (organic hydroxy compound metabolic process), GO:0044282 (small molecule catabolic process), GO:1901575 (organic substance catabolic process), GO:0006081 (cellular aldehyde metabolic process), GO:0044248 (cellular catabolic process), GO:0006082 (organic acid metabolic process), GO:0006089 (lactate metabolic process), GO:0042182 (ketone catabolic process), GO:0046185 (aldehyde catabolic process), GO:0009438 (methylglyoxal metabolic process), GO:0043436 (oxoacid metabolic process), GO:0019752 (carboxylic acid metabolic process), GO:0051596 (methylglyoxal catabolic process), GO:0032787 (monocarboxylic acid metabolic process)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005829 (cytosol), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0005737 (cytoplasm), GO:0043229 (intracellular organelle), GO:0043227 (membrane-bounded organelle), GO:0043231 (intracellular membrane-bounded organelle), GO:0005634 (nucleus)
Protein: Ras-related protein RabC (P34143)
Organism: Dictyostelium discoideum (Social amoeba)
Function: Not known
Subcellular location: Cell membrane {ECO:0000305}; Lipid-anchor {ECO:0000305}; Cytoplasmic side {ECO:0000305}.
Sequence: MEEEILYKIILVGESGVGKSSILVRFTDNTFSQHFAPTLGVDFNVKTIRNKETGQTVKLQLWDTAGQERFKSITQTFYRGSHGVIVVYDVTDPKSFERCKNWVEDINQYTQDGMIIILVGNKSDMVAQRKVTFEQGQEMAEQLKTKFLEVSAKENNGVTQVFDLLVQDIEATMKNSKVAQNQLNLNSEVGQKRGCC
InterPro domains: - IPR001806: Small GTPase (family) [1-196]
- IPR050227: Ras-related protein Rab (family) [6-186]
- IPR027417: P-loop containing nucleoside triphosphate hydrolase (homologous_superfamily) [1-194]
- IPR005225: Small GTP-binding domain (domain) [7-165]
Gene Ontology annotations:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0005515 (protein binding)
Biological Process (BP): GO:0008150 (biological process), GO:0065007 (biological regulation), GO:0051179 (localization), GO:0048518 (positive regulation of biological process), GO:0050789 (regulation of biological process), GO:0051234 (establishment of localization), GO:0051050 (positive regulation of transport), GO:0032879 (regulation of localization), GO:0050794 (regulation of cellular process), GO:0048522 (positive regulation of cellular process), GO:0060627 (regulation of vesicle-mediated transport), GO:0051130 (positive regulation of cellular component organization), GO:0051049 (regulation of transport), GO:0045807 (positive regulation of endocytosis), GO:0051128 (regulation of cellular component organization), GO:0006810 (transport), GO:0030100 (regulation of endocytosis), GO:0033043 (regulation of organelle organization), GO:0016192 (vesicle-mediated transport), GO:0006909 (phagocytosis), GO:0048548 (regulation of pinocytosis), GO:1905301 (regulation of macropinocytosis)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0018995 (host cellular component), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0016020 (membrane), GO:0005737 (cytoplasm), GO:0031090 (organelle membrane), GO:0031410 (cytoplasmic vesicle), GO:0043229 (intracellular organelle), GO:0043657 (host cell), GO:0043228 (non-membrane-bounded organelle), GO:0005773 (vacuole), GO:0033643 (host cell part), GO:0043227 (membrane-bounded organelle), GO:0000323 (lytic vacuole), GO:0030139 (endocytic vesicle), GO:0043231 (intracellular membrane-bounded organelle), GO:0000331 (contractile vacuole), GO:0098588 (bounding membrane of organelle), GO:0043232 (intracellular non-membrane-bounded organelle), GO:0012506 (vesicle membrane), GO:0140220 (pathogen-containing vacuole), GO:0005774 (vacuolar membrane), GO:0031982 (vesicle), GO:0030659 (cytoplasmic vesicle membrane), GO:0005811 (lipid droplet), GO:0005764 (lysosome), GO:0031164 (contractile vacuolar membrane), GO:0097708 (intracellular vesicle), GO:0045335 (phagocytic vesicle), GO:0098852 (lytic vacuole membrane), GO:0062159 (contractile vacuole complex), GO:0005765 (lysosomal membrane)
Protein: Rac-like GTP-binding protein RAC13 (Q41253)
Organism: Gossypium hirsutum (Upland cotton) (Gossypium mexicanum)
Function: Could participate in a signal transduction pathway that controls cytoskeletal organization.
Subcellular location: Cytoplasm {ECO:0000250}. Membrane {ECO:0000250}; Peripheral membrane protein {ECO:0000250}. Note=Associated with the membrane when activated.
Sequence: MSTARFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENIYKKWIPELRHYAHNVPVVLVGTKLDLRDDKQFLIDHPGATPISTSQGEELKKMIGAVTYIECSSKTQQNVKAVFDAAIKVALRPPKPKRKPCKRRTCAFL
InterPro domains: - IPR001806: Small GTPase (family) [2-196]
- IPR003578: Small GTPase Rho (family) [5-187]
- IPR027417: P-loop containing nucleoside triphosphate hydrolase (homologous_superfamily) [5-193]
- IPR005225: Small GTP-binding domain (domain) [7-171]
Interaction partners: - Protein LOL2-like
- Protein LOL2-like
- Kinesin-like calmodulin-binding protein
- Kinesin-like calmodulin-binding protein
- Protein TIME FOR COFFEE-like
- Guanine nucleotide exchange factor SPIKE 1-like
- Guanine nucleotide exchange factor SPIKE 1-like
- Protein NAP1-like isoform X1
- RING-type E3 ubiquitin transferase
- RING-type E3 ubiquitin transferase
Gene Ontology annotations:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0003824 (catalytic activity), GO:0097367 (carbohydrate derivative binding), GO:0036094 (small molecule binding), GO:1901363 (heterocyclic compound binding), GO:0016787 (hydrolase activity), GO:0043167 (ion binding), GO:0097159 (organic cyclic compound binding), GO:0005515 (protein binding), GO:0016817 (hydrolase activity, acting on acid anhydrides), GO:1901265 (nucleoside phosphate binding), GO:0043168 (anion binding), GO:0000166 (nucleotide binding), GO:0019899 (enzyme binding), GO:0032553 (ribonucleotide binding), GO:0035639 (purine ribonucleoside triphosphate binding), GO:0019900 (kinase binding), GO:0032555 (purine ribonucleotide binding), GO:0016818 (hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides), GO:0017076 (purine nucleotide binding), GO:0016462 (pyrophosphatase activity), GO:0005525 (GTP binding), GO:0019001 (guanyl nucleotide binding), GO:0032561 (guanyl ribonucleotide binding), GO:0017111 (ribonucleoside triphosphate phosphatase activity), GO:0003924 (GTPase activity)
Biological Process (BP): GO:0008150 (biological process), GO:0009987 (cellular process), GO:0071840 (cellular component organization or biogenesis), GO:0071554 (cell wall organization or biogenesis), GO:0042546 (cell wall biogenesis), GO:0071669 (plant-type cell wall organization or biogenesis), GO:0044085 (cellular component biogenesis), GO:0009832 (plant-type cell wall biogenesis), GO:0009834 (plant-type secondary cell wall biogenesis)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0016020 (membrane)
Protein: UDP-N-acetylmuramoylpentapeptide-lysine N(6)-alanyltransferase (EC 2.3.2.10) (Q9EY50)
Organism: Weissella viridescens (Lactobacillus viridescens)
Function: Involved in the synthesis of the bacterial cell wall. Catalyzes the addition of alanine into the interchain peptide bridge of peptidoglycan precursor using aminoacyl-tRNA(Ala) as amino acid donor. This alanine is added to the epsilon-amino group of the L-lysine of the peptidoglycan UDP-N-acetyl-alpha-D-muramoyl-L-alanyl-D-glutamyl-L-lysyl-D-alanyl-D-alanine, in a ribosome-independent mechanism. Specific for UDP-N-acetyl-muramoyl-pentapeptide. Has no activity toward UDP-N-acetyl-muramoyl-tetrapeptide or UDP-N-acetyl-muramoyl-tripeptide. Also acts on L-seryl-tRNA(Ser).
Sequence: MPVLNLNDPQAVERYEEFMRQSPYGQVTQDLGWAKVKNNWEPVDVYLEDDQGAIIAAMSMLLGDTPTDKKFAYASKGPVMDVTDVDLLDRLVDEAVKALDGRAYVLRFDPEVAYSDEFNTTLQDHGYVTRNRNVADAGMHATIQPRLNMVLDLTKFPDAKTTLDLYPSKTKSKIKRPFRDGVEVHSGNSATELDEFFKTYTTMAERHGITHRPIEYFQRMQAAFDADTMRIFVAEREGKLLSTGIALKYGRKIWYMYAGSMDGNTYYAPYAVQSEMIQWALDTNTDLYDLGGIESESTDDSLYVFKHVFVKDAPREYIGEIDKVLDPEVYAELVKD
InterPro domains: - IPR003447: FemABX peptidyl transferase (family) [1-336]
- IPR016181: Acyl-CoA N-acyltransferase (homologous_superfamily) [4-334]
- IPR050644: Peptidoglycan Glycine Bridge Synthesis (family) [6-331]
Interaction partners: - Aminoacyltransferase FemA
- UDP-N-acetylglucosamine--N-acetylmuramyl-
- Lipid II isoglutaminyl synthase subunit MurT
- Aminoacyltransferase FemA
Gene Ontology annotations:
Molecular Function (MF): GO:0003674 (molecular function), GO:0003824 (catalytic activity), GO:0016740 (transferase activity), GO:0016757 (glycosyltransferase activity), GO:0016758 (hexosyltransferase activity)
Biological Process (BP): GO:0008150 (biological process), GO:0008152 (metabolic process), GO:0009987 (cellular process), GO:0044237 (cellular metabolic process), GO:0071704 (organic substance metabolic process), GO:0071554 (cell wall organization or biogenesis), GO:0044238 (primary metabolic process), GO:0044036 (cell wall macromolecule metabolic process), GO:0005975 (carbohydrate metabolic process), GO:0044260 (cellular macromolecule metabolic process), GO:0043170 (macromolecule metabolic process), GO:0044262 (cellular carbohydrate metabolic process), GO:0010383 (cell wall polysaccharide metabolic process), GO:0043412 (macromolecule modification), GO:0005976 (polysaccharide metabolic process), GO:0044264 (cellular polysaccharide metabolic process), GO:1990937 (xylan acetylation), GO:0010410 (hemicellulose metabolic process), GO:0045491 (xylan metabolic process)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0071944 (cell periphery), GO:0016020 (membrane), GO:0005886 (plasma membrane)
Protein: Capsid protein (Core antigen) (Core protein) (HBcAg) (p21.5) (B1Q2W9)
Organism: Hepatitis B virus subtype adr (HBV)
Function: Not known
Subcellular location: Secreted {ECO:0000256|RuleBase:RU361253}. Virion {ECO:0000256|HAMAP-Rule:MF_04076}. Host cytoplasm {ECO:0000256|HAMAP-Rule:MF_04076}.
Sequence: MQLFHLCLIISCSCPTVQASKLCLGWLWGMDIDPYKEFGASVELLSFLPSDFFPSIRDLLDTASALYREALESPEHCSPHHTALRQAILCWGELMNLATWVGSNLEDPASRELVVSYVNVNMGLKIRQLLWFHISCLTFGRETVLEYLVSFGVWIRTPPAYRPPNAPILSTLPETTVVRRRGRSPRRRTPSPRRRRSQSPRRRRSQSRESQC
InterPro domains: - IPR002006: Hepatitis core antigen (family) [30-212]
- IPR036459: Viral capsid core domain supefamily, Hepatitis B virus (homologous_superfamily) [20-178]
- IPR013195: Hepatitis B virus, capsid N-terminal (domain) [1-27]
Gene Ontology annotations:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0005515 (protein binding)
Biological Process (BP): GO:0008150 (biological process), GO:0050896 (response to stimulus), GO:0044419 (biological process involved in interspecies interaction between organisms), GO:0009605 (response to external stimulus), GO:0044403 (biological process involved in symbiotic interaction), GO:0051707 (response to other organism), GO:0009607 (response to biotic stimulus), GO:0051701 (biological process involved in interaction with host), GO:0075136 (response to host), GO:0043207 (response to external biotic stimulus), GO:0052173 (response to defenses of other organism), GO:0052200 (response to host defenses), GO:0052572 (response to host immune response), GO:0052553 (modulation by symbiont of host immune response), GO:0042783 (evasion of host immune response)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0018995 (host cellular component), GO:0033643 (host cell part), GO:0043657 (host cell), GO:0033646 (host intracellular part), GO:0043656 (host intracellular region), GO:0030430 (host cell cytoplasm)
Protein: G-protein coupled receptor family C group 5 member C (Retinoic acid-induced gene 3 protein) (RAIG-3) (Q9NQ84)
Organism: Homo sapiens (Human)
Function: This retinoic acid-inducible G-protein coupled receptor provide evidence for a possible interaction between retinoid and G-protein signaling pathways.
Subcellular location: Cell membrane; Multi-pass membrane protein. Cytoplasmic vesicle membrane; Multi-pass membrane protein. Note=Localized in the plasma membrane and perinuclear vesicles.
Sequence: MAIHKALVMCLGLPLFLFPGAWAQGHVPPGCSQGLNPLYYNLCDRSGAWGIVLEAVAGAGIVTTFVLTIILVASLPFVQDTKKRSLLGTQVFFLLGTLGLFCLVFACVVKPDFSTCASRRFLFGVLFAICFSCLAAHVFALNFLARKNHGPRGWVIFTVALLLTLVEVIINTEWLIITLVRGSGEGGPQGNSSAGWAVASPCAIANMDFVMALIYVMLLLLGAFLGAWPALCGRYKRWRKHGVFVLLTTATSVAIWVVWIVMYTYGNKQHNSPTWDDPTLAIALAANAWAFVLFYVIPEVSQVTKSSPEQSYQGDMYPTRGVGYETILKEQKGQSMFVENKAFSMDEPVAAKRPVSPYSGYNGQLLTSVYQPTEMALMHKVPSEGAYDIILPRATANSQVMGSANSTLRAEDMYSAQSHQAATPPKDGKNSQVFRNPYVWD
InterPro domains: - IPR051753: Retinoic acid-inducible GPCR family 3 (family) [1-401]
- IPR017978: GPCR family 3, C-terminal (domain) [45-299]
Interaction partners: - Metabotropic glutamate receptor 2
Gene Ontology annotations:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0005515 (protein binding)
Biological Process (BP): GO:0008150 (biological process), GO:0050896 (response to stimulus), GO:0050789 (regulation of biological process), GO:0009987 (cellular process), GO:0023052 (signaling), GO:0065007 (biological regulation), GO:0051716 (cellular response to stimulus), GO:0007154 (cell communication), GO:0007165 (signal transduction), GO:0050794 (regulation of cellular process)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0005615 (extracellular space), GO:0005829 (cytosol), GO:0005737 (cytoplasm), GO:0031974 (membrane-enclosed lumen), GO:0005654 (nucleoplasm), GO:0005576 (extracellular region), GO:0043230 (extracellular organelle), GO:0043233 (organelle lumen), GO:0043229 (intracellular organelle), GO:0070062 (extracellular exosome), GO:0043227 (membrane-bounded organelle), GO:0043228 (non-membrane-bounded organelle), GO:0065010 (extracellular membrane-bounded organelle), GO:0043231 (intracellular membrane-bounded organelle), GO:0070013 (intracellular organelle lumen), GO:0031982 (vesicle), GO:0043232 (intracellular non-membrane-bounded organelle), GO:0031981 (nuclear lumen), GO:0005730 (nucleolus), GO:1903561 (extracellular vesicle), GO:0005634 (nucleus)
Protein: Prespore protein Dp87 (Q04503)
Organism: Dictyostelium discoideum (Social amoeba)
Function: Not known
Subcellular location: Spore wall. Note=Stored in prespore vacuoles until it is discharged into the interspace of spores during spore formation.
Sequence: MRILYLASLLFLITLYLSPTFGWGGGRDCESHRSEYTCKSDRSCAYLPFVSCCGKKEFFCVNRDHRNCCDDLSCAKNTRTGEIFEIWSSCKPHRDFVPYHSPNTTTCESLGCEARGMECEWVESSPCYGTSCCPRIPRCVGHHGGGHKCDRMRCPEGFYCEEQGGSACCVPHHDGCGNIQCPWGHYCVNEHGKCRCVPHRPPPRPPVDQCRNQHCPHGYSCRVIKGCATCVRDARPPHNLCRGFGCPEGSHCEVLEKHPVCVRNHVPPHPPPPPQICGSVNCGPGYICTIINGHPTCIRGDGYLCNQTRCPHDYQCETISTNIVKCSPKNDECKWHRCPPGSSCFNSRNGPHCLANNVFPQLCKVTQCPTDFSCKMIRGNPTCIKARPPVPPPHCSTCAELSSACNHVGMICIQVPSNCTNTRFPCCPSHPICIHPSTTAASTIATTASTVATTTSATTAGTTTGGTTTGGSTSDSSAASSADSSAASSSPSSSAASSAASSEPSSSAASSSAPSSASSSAPSSASSSAPSSSASSSAASSAASSESSESSSATS
InterPro domains: - IPR053121: Spore Coat Assembly Protein (family) [10-554]
- IPR007643: Dictyostelium spore coat protein, N-terminal (domain) [28-140]
- IPR003645: Follistatin-like, N-terminal (domain) [148-384]
Interaction partners: - Prestalk protein
- Uncharacterized protein DDB_G0272420
Gene Ontology annotations:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0005515 (protein binding)
Biological Process (BP): GO:0008150 (biological process), GO:0032502 (developmental process), GO:0009987 (cellular process), GO:0048869 (cellular developmental process), GO:0048856 (anatomical structure development), GO:0071840 (cellular component organization or biogenesis), GO:0043934 (sporulation), GO:0009653 (anatomical structure morphogenesis), GO:0048646 (anatomical structure formation involved in morphogenesis), GO:0071554 (cell wall organization or biogenesis), GO:0032989 (cellular component morphogenesis), GO:0030435 (sporulation resulting in formation of a cellular spore), GO:0016043 (cellular component organization), GO:0044085 (cellular component biogenesis), GO:0071555 (cell wall organization), GO:0010927 (cellular component assembly involved in morphogenesis), GO:0042546 (cell wall biogenesis), GO:0070726 (cell wall assembly), GO:0042244 (spore wall assembly), GO:0045229 (external encapsulating structure organization), GO:0070590 (spore wall biogenesis), GO:0022607 (cellular component assembly)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0071944 (cell periphery), GO:0030312 (external encapsulating structure), GO:0031012 (extracellular matrix)
Protein: Glycophorin-C (CD antigen CD236) (Q78HU7)
Organism: Mus musculus (Mouse)
Function: Not known
Subcellular location: Cell membrane {ECO:0000250}; Single-pass type III membrane protein {ECO:0000250}. Note=Linked to the membrane via band 4.1. {ECO:0000250}.
Sequence: MSSPVSKPPPELLEPNPGKSYGIMEIAIIAAVITAVALVLVCLLFLMLRYLYRHKGTYHTNEAKGTEFAESADAALQSDPALQDAGDTSKKEYFI
InterPro domains: - IPR042192: Glycophorin-C (family) [17-95]
- IPR003585: Neurexin/syndecan/glycophorin C (domain) [47-65]
Interaction partners: - Protein 4.1
- Band 3 anion transport protein
- Dematin
- 55 kDa erythrocyte membrane protein
- Glycophorin-A
- Beta-adducin
- Alpha-adducin
- Gamma-adducin
- Ankyrin-1
Gene Ontology annotations:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0005515 (protein binding)
Biological Process (BP): GO:0008150 (biological process), GO:0065007 (biological regulation), GO:0050789 (regulation of biological process), GO:0032502 (developmental process), GO:0009987 (cellular process), GO:0048519 (negative regulation of biological process), GO:0032501 (multicellular organismal process), GO:0048869 (cellular developmental process), GO:0048856 (anatomical structure development), GO:0007275 (multicellular organism development), GO:0009653 (anatomical structure morphogenesis), GO:0050794 (regulation of cellular process), GO:0071840 (cellular component organization or biogenesis), GO:0048523 (negative regulation of cellular process), GO:0032989 (cellular component morphogenesis), GO:0000902 (cell morphogenesis), GO:0060548 (negative regulation of cell death), GO:0010941 (regulation of cell death), GO:0048468 (cell development), GO:0030154 (cell differentiation), GO:0048731 (system development), GO:0016043 (cellular component organization), GO:0022008 (neurogenesis), GO:0000904 (cell morphogenesis involved in differentiation), GO:0030030 (cell projection organization), GO:0007399 (nervous system development), GO:0043069 (negative regulation of programmed cell death), GO:0043067 (regulation of programmed cell death), GO:0032990 (cell part morphogenesis), GO:0048858 (cell projection morphogenesis), GO:0030182 (neuron differentiation), GO:0048666 (neuron development), GO:0048667 (cell morphogenesis involved in neuron differentiation), GO:0042981 (regulation of apoptotic process), GO:0031175 (neuron projection development), GO:0048699 (generation of neurons), GO:0043066 (negative regulation of apoptotic process), GO:0120039 (plasma membrane bounded cell projection morphogenesis), GO:0120036 (plasma membrane bounded cell projection organization), GO:0048812 (neuron projection morphogenesis), GO:0061564 (axon development), GO:0007409 (axonogenesis)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0071944 (cell periphery), GO:0016020 (membrane), GO:0005886 (plasma membrane)