Protein: PIN domain-like family protein (Q8L8C2)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Not known
Subcellular location: Nucleus, nucleolus {ECO:0000256|ARBA:ARBA00004604}.
Sequence: MRVKRQKKNRRTVRFFTVCYGFRQPYKVLCDGTFVHHLVTNEITPADTAVSELLGGPVKLFTTRCVIAELEKLGKDFAESLEAAQTLNTATCEHEEAKTADECLSEVIGVQNTEHFFLGTQDAEFRRKLQQESIVPLVFGLRNILLIDQPSDFQRQSAKDSENKRLTMTDTEKKLLVKRTAKIIASNRKEATIANEEWGMPRVVSTKNGLGVKDRPQFKRNRAKGPNPLSCMKKKKENPQSKSKADSNSNAQKEKKEGGSDTQKRSRKRSKKGKSGPERTE
InterPro domains: - IPR006984: Fcf1/UTP23 (family) [53-148]
- IPR029060: PIN-like domain superfamily (homologous_superfamily) [25-149]
- IPR057776: UTP23, sensor motif region (domain) [218-236]
Interaction partners: - KRR1 small subunit processome component
- Probable U3 small nucleolar RNA-associated protein 11
- F18K10.11 protein
- AT1G07840 protein
- U3 small nucleolar ribonucleoprotein protein IMP3
- WD repeat protein
- At5g11240
- Nucleolar-like protein
- At3g57000
- Protein NUCLEOLAR FACTOR 1
Gene Ontology annotations:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0097159 (organic cyclic compound binding), GO:1901363 (heterocyclic compound binding), GO:0003676 (nucleic acid binding), GO:0003723 (RNA binding), GO:0003729 (mRNA binding)
Biological Process (BP): GO:0008150 (biological process), GO:0008152 (metabolic process), GO:0009987 (cellular process), GO:0044237 (cellular metabolic process), GO:0006807 (nitrogen compound metabolic process), GO:0071840 (cellular component organization or biogenesis), GO:0071704 (organic substance metabolic process), GO:0044238 (primary metabolic process), GO:1901360 (organic cyclic compound metabolic process), GO:0044085 (cellular component biogenesis), GO:0006139 (nucleobase-containing compound metabolic process), GO:0046483 (heterocycle metabolic process), GO:0006725 (cellular aromatic compound metabolic process), GO:0034641 (cellular nitrogen compound metabolic process), GO:0043170 (macromolecule metabolic process), GO:0090304 (nucleic acid metabolic process), GO:0022613 (ribonucleoprotein complex biogenesis), GO:0010467 (gene expression), GO:0042254 (ribosome biogenesis), GO:0016070 (RNA metabolic process), GO:0090305 (nucleic acid phosphodiester bond hydrolysis), GO:0006396 (RNA processing), GO:0090501 (RNA phosphodiester bond hydrolysis), GO:0034470 (ncRNA processing), GO:0006364 (rRNA processing), GO:0034660 (ncRNA metabolic process), GO:0000469 (cleavage involved in rRNA processing), GO:0090502 (RNA phosphodiester bond hydrolysis, endonucleolytic), GO:0016072 (rRNA metabolic process), GO:0000478 (endonucleolytic cleavage involved in rRNA processing)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0031974 (membrane-enclosed lumen), GO:0043229 (intracellular organelle), GO:0043233 (organelle lumen), GO:0043227 (membrane-bounded organelle), GO:0043228 (non-membrane-bounded organelle), GO:0070013 (intracellular organelle lumen), GO:0043232 (intracellular non-membrane-bounded organelle), GO:0043231 (intracellular membrane-bounded organelle), GO:0031981 (nuclear lumen), GO:0005730 (nucleolus), GO:0005634 (nucleus)