Protein: Phenylalanine--tRNA ligase beta subunit (EC 6.1.1.20) (Phenylalanyl-tRNA synthetase beta subunit) (PheRS) (Q728S0)
Organism: Nitratidesulfovibrio vulgaris (strain ATCC 29579 / DSM 644 / CCUG 34227 / NCIMB 8303 / VKM B-1760 / Hildenborough) (Desulfovibrio vulgaris)
Function: Not known
Subcellular location: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00283}.
Sequence: MLLSLKWLREFVPFEGTAAELGDRLTMLGLELEEIIRPFDAIEPIVVGHVVSRERHPEADKLSVCKVDVGQGEPLDIVCGAPNVAAGQRVPVALVGTTMPGGMVIKKAKLRGQPSHGMICSERELGLGEDHDGIMVLPESFRIGARLVDELDLDREVCDIAITPNRADCLSVLGLAREVALAFGLPLTMPALDLKEEGADASNALRIDIPDASLCPLFHGRVLEGAAVRKSPAWMRYRLIAVGVRPISNIVDVTNYILMELGQPLHAYDLDLLAGGRIEVSAAREGERLTTLDGVERVLTSNDLLIRDGEKPVGLAGVMGGAETEISDKSSRVFLEAAVFRPGTIRKTARRLGLSSEASYRFERGVDQVVCTYAMNRAAQLIAGLSGATLRPGICHNEPLPWQAPVLRFRRARGEALLGISLDETFCRETLERLGCKVDAADAADWKVTAPSHRRDFEREADLIEEVARVRGMDTIEPVLPKVMRPLDRAGAPESKYSFWLRLKHWAAGLGLNEAINYSFVGQKDLDHLNLAVDGRIPIMNPLTADQNVLRTELAPGLLQNLRHNIAQGNAGLRLFEVAHIFEADATSDTTARERARLDILVYGSRYDSQWPHVEADADYADIKGIVEHCLAFLHLEGATFTLAASHPFLMPCVDVAVQGRQVGVIGRVRPEIADAYHARKDAWLADLDLDVLRELHDAARIAFRSLPVYPPVRRDITVAAPGSLQVGAVLDHILGLRLPLLCGVELIDVFEPEGKDERNLTFRMTFRHASRTLKDAEVDKERDKVAHSLVEKLPVRI
InterPro domains: - IPR005147: tRNA synthetase, B5-domain (domain) [402-478]
- IPR041616: Phenylalanyl tRNA synthetase beta chain, core domain (domain) [491-693]
- IPR045864: Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL) (homologous_superfamily) [469-695]
- IPR002547: tRNA-binding domain (domain) [39-148]
- IPR036690: Ferrodoxin-fold anticodon-binding domain superfamily (homologous_superfamily) [703-798]
- IPR020825: Phenylalanyl-tRNA synthetase-like, B3/B4 (homologous_superfamily) [194-398]
- IPR005146: B3/B4 tRNA-binding domain (domain) [214-387]
- IPR009061: Putative DNA-binding domain superfamily (homologous_superfamily) [406-477]
- IPR005121: Ferrodoxin-fold anticodon-binding domain (domain) [708-798]
- IPR004532: Phenylalanine-tRNA ligase, class IIc, beta subunit, bacterial type (family) [1-797]
- IPR033714: Phenylalanly tRNA synthetase, tRNA-binding-domain (domain) [45-144]
- IPR045060: Phenylalanine-tRNA ligase, class IIc, beta subunit (family) [3-683]
- IPR012340: Nucleic acid-binding, OB-fold (homologous_superfamily) [39-191]
Interaction partners: - Phenylalanine--tRNA ligase alpha subunit
- Isoleucine--tRNA ligase
- Small ribosomal subunit protein uS2
- Leucine--tRNA ligase
- Small ribosomal subunit protein uS3
- Large ribosomal subunit protein uL15
- DNA-directed RNA polymerase subunit beta
- GMP synthase
- Tyrosine--tRNA ligase
- Small ribosomal subunit protein uS19
Gene Ontology annotations:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0005515 (protein binding)
Biological Process (BP): GO:0008150 (biological process), GO:0008152 (metabolic process), GO:0009987 (cellular process), GO:0009058 (biosynthetic process), GO:0044237 (cellular metabolic process), GO:0044281 (small molecule metabolic process), GO:0006807 (nitrogen compound metabolic process), GO:0071840 (cellular component organization or biogenesis), GO:0071704 (organic substance metabolic process), GO:0044238 (primary metabolic process), GO:1901360 (organic cyclic compound metabolic process), GO:1901564 (organonitrogen compound metabolic process), GO:1901576 (organic substance biosynthetic process), GO:0044085 (cellular component biogenesis), GO:0006139 (nucleobase-containing compound metabolic process), GO:0046483 (heterocycle metabolic process), GO:0006082 (organic acid metabolic process), GO:0019538 (protein metabolic process), GO:0044249 (cellular biosynthetic process), GO:0016043 (cellular component organization), GO:0006725 (cellular aromatic compound metabolic process), GO:0034641 (cellular nitrogen compound metabolic process), GO:0043603 (amide metabolic process), GO:0044260 (cellular macromolecule metabolic process), GO:0043170 (macromolecule metabolic process), GO:1901566 (organonitrogen compound biosynthetic process), GO:0006412 (translation), GO:0009059 (macromolecule biosynthetic process), GO:0006518 (peptide metabolic process), GO:0090304 (nucleic acid metabolic process), GO:0022613 (ribonucleoprotein complex biogenesis), GO:0043604 (amide biosynthetic process), GO:0044271 (cellular nitrogen compound biosynthetic process), GO:0034645 (cellular macromolecule biosynthetic process), GO:0043933 (protein-containing complex organization), GO:0006996 (organelle organization), GO:0010467 (gene expression), GO:0022607 (cellular component assembly), GO:0070925 (organelle assembly), GO:0042254 (ribosome biogenesis), GO:0042274 (ribosomal small subunit biogenesis), GO:0043043 (peptide biosynthetic process), GO:0065003 (protein-containing complex assembly), GO:0002181 (cytoplasmic translation), GO:0006396 (RNA processing), GO:0071826 (ribonucleoprotein complex subunit organization), GO:0000028 (ribosomal small subunit assembly)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0032991 (protein-containing complex), GO:1902494 (catalytic complex), GO:0005622 (intracellular anatomical structure), GO:0005737 (cytoplasm), GO:0016020 (membrane)