wanglab/bioreason-pro-rl-reasoning-data huggingface dataset:
Protein: GTPase-activating protein gyp10 (O94661)
Organism: Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Function: Has a role in vesicular trafficking and septation during cytokinesis.
Subcellular location: Endoplasmic reticulum membrane {ECO:0000269|PubMed:16291723, ECO:0000269|PubMed:16823372}; Single-pass membrane protein {ECO:0000269|PubMed:16291723, ECO:0000269|PubMed:16823372}.
Sequence: MKKKEIKQLKNEIKIALLNSDVETLSHIGKEGHGFLMKSLRKSVWVSLCGLSCRHRMECLSRSTSQSSYADQNQVHLDSERSFFQYKLNPFLLRKHRSQLTKLLSVVFKHYPELCYYQGLHDIAQILLLTLPFSHALPLMEHLVFYRLRDFMLPTLDGTVKQLQLILAVIKARDPTLYEYLIKADIQCYFALSWLITWFAHDVSDISVVCRLFDFFISSHPLTVVYTCAQVVLDNRTSIIELLWDNSGADLLHSYLCKLPASINVNQLIKNTCATISAVPFSSLPLDRYQISPYSCLRNTGDPWEYMSRSNGLLLFRLQLAELQEEKHKPGTKVPAVFLQENIFNGCNMLAAITVIGIGIVASQLIPKSTSNS
InterPro domains: - IPR035969: Rab-GAP-TBC domain superfamily (homologous_superfamily) [38-271]
- IPR000195: Rab-GAP-TBC domain (domain) [35-243]
- IPR045913: GTPase-activating protein TBC20/Gyp8-like (family) [5-314]
Interaction partners: - GTP-binding protein ypt1
- Phosphatidylinositol 4-phosphate 5-kinase its3
- GTP-binding protein ryh1
- Guanine nucleotide exchange factor subunit ric1
Gene Ontology annotations:
Molecular Function (MF): GO:0003674 (molecular function), GO:0098772 (molecular function regulator activity), GO:0030234 (enzyme regulator activity), GO:0140677 (molecular function activator activity), GO:0008047 (enzyme activator activity), GO:0060589 (nucleoside-triphosphatase regulator activity), GO:0030695 (GTPase regulator activity), GO:0005096 (GTPase activator activity)
Biological Process (BP): GO:0008150 (biological process), GO:0051179 (localization), GO:0009987 (cellular process), GO:0051641 (cellular localization), GO:0051234 (establishment of localization), GO:0071840 (cellular component organization or biogenesis), GO:0033036 (macromolecule localization), GO:0046907 (intracellular transport), GO:0006810 (transport), GO:0070727 (cellular macromolecule localization), GO:0051649 (establishment of localization in cell), GO:0016043 (cellular component organization), GO:0051668 (localization within membrane), GO:0045184 (establishment of protein localization), GO:0006886 (intracellular protein transport), GO:0071705 (nitrogen compound transport), GO:0016197 (endosomal transport), GO:0098876 (vesicle-mediated transport to the plasma membrane), GO:0015031 (protein transport), GO:0071702 (organic substance transport), GO:0016192 (vesicle-mediated transport), GO:0008104 (protein localization), GO:0006996 (organelle organization), GO:0090150 (establishment of protein localization to membrane), GO:0072657 (protein localization to membrane), GO:0099638 (endosome to plasma membrane protein transport), GO:0072659 (protein localization to plasma membrane), GO:0032456 (endocytic recycling), GO:0042147 (retrograde transport, endosome to Golgi), GO:1990778 (protein localization to cell periphery), GO:0061951 (establishment of protein localization to plasma membrane)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005737 (cytoplasm), GO:0005622 (intracellular anatomical structure)
Protein: Uncharacterized protein, isoform F (M9PDK6)
Organism: Drosophila melanogaster (Fruit fly)
Function: Not known
Sequence: MTLLGPSAPGMAFMMKKKKYKFNVEVQLQDLVEVALVNEVLFAKIRLLDGGSFQEYSSREEVRNHRVEWNRSFEFPCKMSANASTGVLDPCHLRISIRKEMKGGRSYYKLGFIDLNLAEFAGAGLTSRRFLLEGYDSRHRLDNSMLRVSIKMHMLSGDILFKAPTPNLKSKQSKPSIDDFSNAATGVGLQIPTATALPSIGGGSGGASVSLGGSGVTLGGIPGNQSLPGTRPVSTTKEEDIDNQALIAAIVTDSGLSESSESGVTLTTDNLQQHGSVVVANPISPVTQALPQLGIIGSNNYGTTGGAIGFTGAGNATLIEMGHSRNSSNTSQMSKGSGYSSFSHSQHSRQSSEGDSGHASRFRKSVSLLNRLNQRAINVMKFNIPHSRQNGQKGDEHQQCNSLRVVVAKSHHVHTHLSLSTTVEYASDEQLYQTPNATMTNSQKLAFEDFRTPMAELAAPLFQPMGAGCSGTPSSTYRSAGSPSHNTQYYDSGEASDTDECLNDESGDNDSGLEENFHTPRVAKIKSMENLSILEMEFHKASMELDRNSPRRLKQLAEHAQIPKMKSLNNLCFDHYAEQSVREEFQRMHEQSLEERMRFQQHHQLRKNSNASNGSATKIYVKHLSHQNHYHIKVGNAKFIGQDGNDSPQSMHYPIQKMRSMGTIQDIVSDRIEPDPFLTPTTERKPNFSRLVQSAEKPVLGSSYVNRLLTYDAVDSPSEPFNSSVSFMSRTPFQRAYRRNIQQGSSSTPLATQDFFAVRPHSTNAAYELMRNPSSGSLVISETGSLDRTKSSGEKRKKGALDDGPRVSDRVEETRVNPDSLIDEILKDTKLDQLEESAETSGLQLYIARDGTASLGGHEVKSSVRAGALKQVVMQDRR
InterPro domains: - IPR019448: NT-type C2 domain (domain) [12-158]
- IPR039931: EEIG1/2-like (family) [10-877]
Gene Ontology annotations:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0005515 (protein binding)
Biological Process (BP): GO:0008150 (biological process), GO:0051179 (localization), GO:0051234 (establishment of localization), GO:0033036 (macromolecule localization), GO:0006403 (RNA localization), GO:0051236 (establishment of RNA localization), GO:0006810 (transport), GO:0071702 (organic substance transport), GO:0050658 (RNA transport), GO:0071705 (nitrogen compound transport), GO:0015931 (nucleobase-containing compound transport), GO:0033227 (dsRNA transport), GO:0050657 (nucleic acid transport)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0071944 (cell periphery), GO:0016020 (membrane), GO:0005886 (plasma membrane)
Protein: HMG box-containing protein C10F6.08c (O42648)
Organism: Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Function: Not known
Subcellular location: Nucleus {ECO:0000269|PubMed:16823372}.
Sequence: MENPPYHVSISKSEEIKYRQKCKDLKARIQEIQKGNQELLSKYEVIRRAVKRGRLERAILMEQLELQSEAKSREFGQRSEPSPPPPPEGIKIKISTKGAGNPSAKKLKISTEETSDTNVALNNTSEISHKSSNNSQPKDASVNDTDADFEQQNQVVQSKDEKITNTDPIPSPIITNLKTESSKSSGAKKATSNAKITDTMLFNHFSSIQKPKLKAEGSTLKGQALKKTLEDTWNNLTEEEKKPYHEGLLAAREKAREARRRRSAQNSAKLEKEKAKEKQKDKDQEQDTVSDKNQIDEIEKGQKEVDEEPVSEPTTSPILPPKNQEPIRMGGFTVVNRSSNA
InterPro domains: - IPR056513: INO80 complex subunit F (domain) [18-64]
- IPR036910: High mobility group box domain superfamily (homologous_superfamily) [188-296]
- IPR009071: High mobility group box domain (domain) [187-264]
Interaction partners: - Chromatin-remodeling ATPase INO80
- Probable actin-related protein 8
- INO80 complex subunit 1
- Chromatin-remodeling complex subunit ies6
- RuvB-like helicase 2
- Actin-like protein arp5
- RuvB-like helicase 1
- SWI/SNF and RSC complexes subunit arp42
- Uncharacterized protein C16C4.20c
- INO80 complex subunit 3
Gene Ontology annotations:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0005515 (protein binding)
Biological Process (BP): GO:0008150 (biological process), GO:0065007 (biological regulation), GO:0050789 (regulation of biological process), GO:0009987 (cellular process), GO:0048519 (negative regulation of biological process), GO:0019222 (regulation of metabolic process), GO:0071840 (cellular component organization or biogenesis), GO:0009892 (negative regulation of metabolic process), GO:0010605 (negative regulation of macromolecule metabolic process), GO:0060255 (regulation of macromolecule metabolic process), GO:0016043 (cellular component organization), GO:0006325 (chromatin organization), GO:0010629 (negative regulation of gene expression), GO:0010468 (regulation of gene expression), GO:0040029 (epigenetic regulation of gene expression), GO:0006338 (chromatin remodeling), GO:0045814 (negative regulation of gene expression, epigenetic), GO:0031507 (heterochromatin formation), GO:0070828 (heterochromatin organization), GO:0033696 (heterochromatin boundary formation)
Cellular Component (CC): GO:0005575 (cellular component), GO:0032991 (protein-containing complex), GO:0110165 (cellular anatomical entity), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0000785 (chromatin), GO:1902494 (catalytic complex), GO:0140513 (nuclear protein-containing complex), GO:0031974 (membrane-enclosed lumen), GO:0070603 (SWI/SNF superfamily-type complex), GO:0043229 (intracellular organelle), GO:0043228 (non-membrane-bounded organelle), GO:0043233 (organelle lumen), GO:1904949 (ATPase complex), GO:0043227 (membrane-bounded organelle), GO:0043231 (intracellular membrane-bounded organelle), GO:0097346 (INO80-type complex), GO:0043232 (intracellular non-membrane-bounded organelle), GO:0070013 (intracellular organelle lumen), GO:0031011 (Ino80 complex), GO:0005634 (nucleus), GO:0031981 (nuclear lumen), GO:0005694 (chromosome), GO:0000228 (nuclear chromosome)
Protein: Eukaryotic translation initiation factor 4E-4 (eIF-4E-4) (eIF4E-4) (eIF-4F 25 kDa subunit) (mRNA cap-binding protein) (Q22888)
Organism: Caenorhabditis elegans
Function: Recognizes and binds the 7-methylguanosine-containing mRNA cap during an early step in the initiation of protein synthesis and facilitates ribosome binding by inducing the unwinding of the mRNAs secondary structures. All 5 eIF4E proteins bind monomethyl cap structures. Only ife-1, ife-2 and ife-5 bind trimethyl cap structures which result from trans-splicing. Translation of trimethyl cap structure mRNAs may be regulated by intracellular redox state; disulfide bonds change the width and depth of the cap-binding cavity determining selectivity to mRNA caps.
Sequence: MEAETSTQEVVKQVKNLPILMEDAPVGSDDHQLQYSYTFSYFMRPTGKFDPEDYASYVQPVGIMKSVEQFWSIMVHFKRPTEMCDKADIHFFKTGVKPVWEDPANCKGGKWIIRLKKGLSTRIWENLLMAIIGEQFLVGDELCGAVCSIRNQEDIISLWNRNADDTPVTNRIRETLRSVLQLPQNTVLEYKRHDDCLRDQSSYRHTTKNICK
InterPro domains: - IPR023398: Translation Initiation factor eIF- 4e-like (homologous_superfamily) [2-205]
- IPR019770: Eukaryotic translation initiation factor 4E (eIF-4E), conserved site (conserved_site) [88-111]
- IPR001040: Translation Initiation factor eIF- 4e (family) [14-197]
Interaction partners: - GYF domain-containing protein gyf-1
- MIF4G domain-containing protein
- Cytoplasmic FMR1-interacting protein homolog
- Translational repressor ifet-1
- mRNA cap guanine-N
- Eukaryotic initiation factor 4A
- Suppressor of aph-1
- SUI1 domain-containing protein
Gene Ontology annotations:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0097159 (organic cyclic compound binding), GO:1901363 (heterocyclic compound binding), GO:0005515 (protein binding), GO:0003676 (nucleic acid binding), GO:0003723 (RNA binding), GO:0000339 (RNA cap binding), GO:0000340 (RNA 7-methylguanosine cap binding)
Biological Process (BP): GO:0008150 (biological process), GO:0032501 (multicellular organismal process), GO:0008340 (determination of adult lifespan)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0005737 (cytoplasm), GO:0043229 (intracellular organelle), GO:0043227 (membrane-bounded organelle), GO:0043231 (intracellular membrane-bounded organelle), GO:0005634 (nucleus)
Protein: Caldesmon 1b (E7EZ62)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Function: Not known
Sequence: MDEDFDFERRRELRRQKREEMQREAEKMNSYDDDEEAARERRRRARQERLRNMENEESSNITTESNSTETSSLINSSEPAEDDDDQALLERIAKREERRQKRMKEALERQKELDPTITNGTESTSAATENEPNTRRDDQESSRNDLTSTETNSWKEKEELKVEEKLQERNVDVEETVPVQEETVPEEPKASLEEINKPDDEDRPTRSYLREQESMEEKPKEPTNKVVEEKSKPSFLRDRLKVSTKPQDLPDSTAKAKKQESTLSPSRLRSPETEKQDPIAKLEAERKLQELKRRRNETDSEALEKMKQKQQTAEAELEELRKKREERKKVLEEEEKQKKQQQADKRAKEEEERRKMKEEIERRRAEAAEKKKQKEESKEGSKVAFIAPKGASAKIGEKAEFLNKSALKSPIKTSHTPLVCKIGNRLEQYTSAVQTKEVTKSPKSPVDVPVAEGLRSIKSMWEKGNVVNPTPSPASPPVATKETAGLNIGVAGRINSWKTKTPEPKPAEPKPAPEPEKTPAKTEQKPAEVTKPRGSWETKGSTPAKVFAAKSKFVTNGTRK
InterPro domains: - IPR006018: Caldesmon/lymphocyte specific protein (family) [32-537]
Interaction partners: - Mitogen-activated protein kinase
- Mitogen-activated protein kinase
- Lymphocyte specific protein 1.
- Rho guanine nucleotide exchange factor
- Ankyrin repeat and death domain-containing 1A.
- Sosondowah ankyrin repeat domain family d.
- Transmembrane protein 151A.
- Transmembrane protein 151A.
- Si:ch211-250g4.3.
- Ras association domain family member 4.
Gene Ontology annotations:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0005515 (protein binding), GO:0008092 (cytoskeletal protein binding), GO:0003779 (actin binding)
Biological Process (BP): GO:0008150 (biological process), GO:0032501 (multicellular organismal process), GO:0003008 (system process), GO:0003012 (muscle system process), GO:0006936 (muscle contraction), GO:0006939 (smooth muscle contraction), GO:0014821 (phasic smooth muscle contraction)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0030017 (sarcomere), GO:0031674 (I band), GO:0030018 (Z disc), GO:0005737 (cytoplasm), GO:0099080 (supramolecular complex), GO:0099081 (supramolecular polymer), GO:0043292 (contractile fiber), GO:0043229 (intracellular organelle), GO:0043228 (non-membrane-bounded organelle), GO:0099512 (supramolecular fiber), GO:0030016 (myofibril), GO:0043232 (intracellular non-membrane-bounded organelle)
Protein: Probable glycosidase CRH1 (EC 3.2.-.-) (Congo red hypersensitive protein 1) (P53301)
Organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Function: Probable glycosidase that plays a role in cell wall architecture. Required for the transfer of chitin to 1,6-beta-glucan in the cell wall.
Subcellular location: Secreted, cell wall. Membrane; Lipid-anchor, GPI-anchor. Note=Covalently-linked GPI-modified cell wall protein (GPI-CWP), localized particularly in chitin-rich areas. Found at the incipient bud site, around the septum area in later stages of budding, and in ascospore envelopes. Redistributes uniformly over the cell cortex upon heat stress.
Sequence: MKVLDLLTVLSASSLLSTFAAAESTATADSTTAASSTASCNPLKTTGCTPDTALATSFSEDFSSSSKWFTDLKHAGEIKYGSDGLSMTLAKRYDNPSLKSNFYIMYGKLEVILKAANGTGIVSSFYLQSDDLDEIDIEWVGGDNTQFQSNFFSKGDTTTYDRGEFHGVDTPTDKFHNYTLDWAMDKTTWYLDGESVRVLSNTSSEGYPQSPMYLMMGIWAGGDPDNAAGTIEWAGGETNYNDAPFTMYIEKVIVTDYSTGKKYTYGDQSGSWESIEADGGSIYGRYDQAQEDFAVLANGGSISSSSTSSSTVSSSASSTVSSSVSSTVSSSASSTVSSSVSSTVSSSSSVSSSSSTSPSSSTATSSKTLASSSVTTSSSISSFEKQSSSSSKKTVASSSTSESIISSTKTPATVSSTTRSTVAPTTQQSSVSSDSPVQDKGGVATSSNDVTSSTTQISSKYTSTIQSSSSEASSTNSVQISNGADLAQSLPREGKLFSVLVALLALL
InterPro domains: - IPR013320: Concanavalin A-like lectin/glucanase domain superfamily (homologous_superfamily) [52-257]
- IPR000757: Beta-glucanase-like, N-terminal domain (domain) [34-260]
- IPR050546: Glycosyl Hydrolase Family 16 (family) [11-258]
- IPR017168: CRH-like (family) [10-507]
Interaction partners: - Congo red hypersensitive protein 2
- Cell wall mannoprotein PST1
- 1,3-beta-glucanosyltransferase GAS1
- Glucan 1,3-beta-glucosidase
- Cell wall protein CWP1
Gene Ontology annotations:
Molecular Function (MF): GO:0003674 (molecular function), GO:0003824 (catalytic activity), GO:0016740 (transferase activity), GO:0016757 (glycosyltransferase activity)
Biological Process (BP): GO:0008150 (biological process), GO:0009987 (cellular process), GO:0071840 (cellular component organization or biogenesis), GO:0071554 (cell wall organization or biogenesis), GO:0071555 (cell wall organization), GO:0016043 (cellular component organization), GO:0071852 (fungal-type cell wall organization or biogenesis), GO:0045229 (external encapsulating structure organization), GO:0031505 (fungal-type cell wall organization)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0016020 (membrane), GO:0071944 (cell periphery), GO:0005737 (cytoplasm), GO:0030312 (external encapsulating structure), GO:0005773 (vacuole), GO:0043229 (intracellular organelle), GO:0043227 (membrane-bounded organelle), GO:0005618 (cell wall), GO:0005886 (plasma membrane), GO:0000323 (lytic vacuole), GO:0043231 (intracellular membrane-bounded organelle), GO:0009277 (fungal-type cell wall), GO:0000322 (storage vacuole), GO:0000324 (fungal-type vacuole)
Protein: Hyphally-regulated cell wall protein N-terminal domain-containing protein (G8B4T8)
Organism: Candida parapsilosis (strain CDC 317 / ATCC MYA-4646) (Yeast) (Monilia parapsilosis)
Function: Not known
Subcellular location: Secreted, cell wall {ECO:0000256|ARBA:ARBA00004191}.
Sequence: MQSLFRAQLVLWLFIATAWARNFQGGKTIDWGTQNVGYGDVHIFPGAIWSIINNAASDFHGNIQVDENGGLYVSAVSPSITLSATLYDSIYGFVNNGVVSFNAIKGASGYIFKIMGNKFENNGDLFFAASGQGSMESWIKAPDFHNNGLMHFYQSMKSDSYTYLGYDGKTMVNNGQICFTNQNWKQLTGMLGSGCVTAQGKSSFYFMNTNLQISEGEIFYLSNGETSIMAVGSINNPQTFHVRGFGTDKNGVANKLGLTATLSTPTPGKNPWAYNARDGILTLYVGLYTQNFEIGTGYDFTKFQIVSDTSRGLPGIYNGAVQYNGPPPNPGMPSECKPCKSVPGIPGVDPDERAETSLLSTNQETETSSTPTSTQPSVETLDNTSTSPEYYSTTTVTDIFTTTETTVLTTTWLVTKSDGSVETETGVVTQSGDSSSTITTFETPSDTLSYDSTTTVTDTFTTTETTVFTTTWIVTKSDGSVETETGIITQSGSSSSTITTFEPSETGASSSATDTGLLPNSSETGAGSVSPPESSDTLSYDSTTTVTDTFTTTETTVFTTTWIVTKTDGSVETETGIITQSGSSSSTITTFEPSETEISSTVTGFSSETGLGSGSATSTEPLTNSDETKISSGSTSEVSSNAASESSGEPTGEPTGEPSGSGSESTGEPTGEPTGEPSGSGSESTGEPTGEPSGSGSASTGEPTGEPSGSGSESTGEPTGEPTGEPSGSGSESTGEPTGEPTGEPTGEPSGSGSESTGVPTGEPSGSGSESTGEPTGEPTGESTGEPTGEPTGEPTGEPTGEPTGEPTGSASESTGGASGSGQPTGEPTGEPSGSGSASTGEPTGEPSGSGSESTGEPTGQPTGSASESTGGASEPTGEPTGEPTGQPTGQPTGQPTGQPTGQPTGQPTGQPTGQPTGQPTGQPTGQPTGQPTGQPTGEPTGQPTGQPTGQPTGQPTGQPTGQPTGQPTGQPTGQPTGQPTGQPTGQPTGQPTGQPTGQPTGQPTGQPTGQPTGSKGLSSSGNESTSSGVESATTGSDSGLGSTTESPGSHESGSGNTGAGDNGSGNTGAGDNGSGNTGAGNTGAGDNGAGSGNTGAGDNGAGSGNTGAGGNGSGNTGAGDNGSGSGNTGAGDNGSGSGNTGAGDNGAGSGNTGAGGNGSGNTGAGDNGAGSGNTGAGDNGSGNTGAGNTGAGDNGAGSGNTGAGDNGAGSGNTGAGGNGSGNTGAGDNGSGSGNTGAGDNGSGSGNTGAGDNGSGNTGAGNTGAGDNGAGSGNTGAGDNGAGDNGAGNTGAGDNGTGSGNTGAGDNGAGGNGSGNTGAGNTGAGSGNTGAGGNGSGNTGAGNTGAGNTGAGGNGSGNTGAGNTGAGDNGAGSNGSASNGGPSAHESLSASQPKESSPSNVTTYEGSGAVTKVSSVTSIIVCLVMLIAF
InterPro domains: - IPR006970: PT repeat (repeat) [875-909]
- IPR021031: Hyphally-regulated cell wall protein, N-terminal (domain) [12-346]
Interaction partners: - SPX domain-containing protein
- Ubiquitin-like domain-containing protein
- Glycerophosphodiester phosphodiesterase
- 60S ribosomal protein L21-A
- Large ribosomal subunit protein eL40 domain-containing protein
- Uncharacterized protein
- Large ribosomal subunit protein uL2 C-terminal domain-containing protein
- MPN domain-containing protein
- 60S ribosomal protein L16
- Complex 1 LYR protein domain-containing protein
Gene Ontology annotations:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0044877 (protein-containing complex binding)
Biological Process (BP): GO:0008150 (biological process), GO:0009987 (cellular process), GO:0007155 (cell adhesion), GO:0098609 (cell-cell adhesion)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0071944 (cell periphery), GO:0030312 (external encapsulating structure), GO:0005618 (cell wall), GO:0009277 (fungal-type cell wall)
Protein: BHLH domain-containing protein (Q75H21)
Organism: Oryza sativa subsp. japonica (Rice)
Function: Not known
Sequence: MQGDPGYGYGGYGYGYGYGYGGAGYDMAGYGGGGGGYYTSDPYNAAPAAYEDPLAVAGRRQHDFPAPLTGVEFQPSDTCPKNYVIFDQTYDRSRVMFHPSLANNLGNSGGGYDHHHHCGYGGFEQDYASKSAYYGVEDDGGGGCSIRQKEDTDEIDALMSTEDGEEEDDVLSTGRTPGCRAGGSPDSTCSSGASRSDCGGGRKPEAGGGERKKERMKKMMRTLKGIIPGGDRMDTPAVLDEAVRYLKSLKVEVKKLGPVRRRRRRNSSRAPPPLWSSSSLGMVAVGFAKLLPSSSRPPFPPKIAGAPLSPSTRTSPPPRPRRRHCRLSSIVVRALGEFAASPSTRRCCPFAPPRRHSPASTRCRAAIGNDVIVDVSATSAVDPW
InterPro domains: - IPR011598: Myc-type, basic helix-loop-helix (bHLH) domain (domain) [200-249]
- IPR036638: Helix-loop-helix DNA-binding domain superfamily (homologous_superfamily) [211-271]
- IPR037546: Transcription factor SAC51-like (family) [24-257]
Gene Ontology annotations:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0005515 (protein binding)
Biological Process (BP): GO:0008150 (biological process), GO:0065007 (biological regulation), GO:0050789 (regulation of biological process), GO:0019222 (regulation of metabolic process), GO:0050794 (regulation of cellular process), GO:0060255 (regulation of macromolecule metabolic process), GO:0031323 (regulation of cellular metabolic process), GO:0080090 (regulation of primary metabolic process), GO:0009889 (regulation of biosynthetic process), GO:0051171 (regulation of nitrogen compound metabolic process), GO:0019219 (regulation of nucleobase-containing compound metabolic process), GO:0051252 (regulation of RNA metabolic process), GO:0010556 (regulation of macromolecule biosynthetic process), GO:0010468 (regulation of gene expression), GO:0031326 (regulation of cellular biosynthetic process), GO:2001141 (regulation of RNA biosynthetic process), GO:0006355 (regulation of DNA-templated transcription), GO:1903506 (regulation of nucleic acid-templated transcription)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0043229 (intracellular organelle), GO:0043227 (membrane-bounded organelle), GO:0043231 (intracellular membrane-bounded organelle), GO:0005634 (nucleus)
Protein: Serine (Or cysteine) peptidase inhibitor, clade B (Ovalbumin), member 3B (Serpinb3b) (Q6UKZ2)
Organism: Mus musculus (Mouse)
Function: Not known
Sequence: MIRFHAADVKFAVEMYRQLRESDKNIFYSPISMMTALAMLQLGAKGNTEIQIEKVLQFIETTKKTTKKSEHCDDEENVHEQFQKLITQLNKSNDDYDLKAANSIYGAKGFPFLQTFLEDIKEYYQAKVESLDFEHATEESEKKINSWVESKTNGKIKDLFPSGSLSSSTILVLVNAVYFKGQWNRKFDENHTREEKFWLNKNTSKPVQMMKQRNKFNFSFLGDVHAQIVEIPYKGKDLSMFVLLPMEIDGLKQLEEQLTTDKLLEWIKAENMHLTELYLSLPRFKVEEKYDLQVPLEHMGMVDAFDPQKADFSGMSSIPGLVVSKVLHKSFVEVNEEGTEAAAATGVEVSVRSAQIAEDFCCDHPFLFFIIHRMTNSILFFGRISSP
InterPro domains: - IPR042178: Serpin superfamily, domain 1 (homologous_superfamily) [14-334]
- IPR000215: Serpin family (family) [6-387]
- IPR036186: Serpin superfamily (homologous_superfamily) [4-387]
- IPR042185: Serpin superfamily, domain 2 (homologous_superfamily) [185-380]
- IPR023796: Serpin domain (domain) [9-387]
Gene Ontology annotations:
Molecular Function (MF): GO:0003674 (molecular function), GO:0098772 (molecular function regulator activity), GO:0030234 (enzyme regulator activity), GO:0140678 (molecular function inhibitor activity), GO:0061134 (peptidase regulator activity), GO:0004857 (enzyme inhibitor activity), GO:0061135 (endopeptidase regulator activity), GO:0030414 (peptidase inhibitor activity), GO:0004866 (endopeptidase inhibitor activity), GO:0004867 (serine-type endopeptidase inhibitor activity), GO:0004869 (cysteine-type endopeptidase inhibitor activity)
Biological Process (BP): GO:0008150 (biological process), GO:0050896 (response to stimulus), GO:0002376 (immune system process), GO:0009987 (cellular process), GO:0001906 (cell killing), GO:0002252 (immune effector process), GO:0006955 (immune response), GO:0001909 (leukocyte mediated cytotoxicity), GO:0002443 (leukocyte mediated immunity), GO:0002250 (adaptive immune response), GO:0002449 (lymphocyte mediated immunity), GO:0001913 (T cell mediated cytotoxicity), GO:0002460 (adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains), GO:0002456 (T cell mediated immunity)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0005737 (cytoplasm), GO:0043229 (intracellular organelle), GO:0043227 (membrane-bounded organelle), GO:0043231 (intracellular membrane-bounded organelle), GO:0005634 (nucleus)