wanglab/bioreason-pro-rl-reasoning-data huggingface dataset:
Protein: Small ribosomal subunit protein uS14 (C3SR07)
Organism: Escherichia coli
Function: Not known
Sequence: MAKQSMKAREVKRVALADKYFAKRAELKAIISDVNASDEDRWNAVLKLQTLPRDSSPSRQRNRCRQTGRPHGFLRKFGLSRIKVREAAMRGEIPGLKKASW
InterPro domains: - IPR023036: Small ribosomal subunit protein uS14, bacteria/plastid (family) [1-101]
- IPR001209: Small ribosomal subunit protein uS14 (family) [2-101]
- IPR018271: Small ribosomal subunit protein uS14, conserved site (conserved_site) [63-85]
Interaction partners: - Large ribosomal subunit protein uL18
- Large ribosomal subunit protein uL6
- Alternative ribosome-rescue factor A
- GTP pyrophosphokinase
- Small ribosomal subunit protein uS7
- Small ribosomal subunit protein uS11
- 50S ribosomal protein L11
- Large ribosomal subunit protein uL5
- Small ribosomal subunit protein uS12
- 30S ribosomal protein S5
Gene Ontology annotations:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005198 (structural molecule activity), GO:0003735 (structural constituent of ribosome)
Biological Process (BP): GO:0008150 (biological process), GO:0009987 (cellular process), GO:0071840 (cellular component organization or biogenesis), GO:0016043 (cellular component organization), GO:0044085 (cellular component biogenesis), GO:0043933 (protein-containing complex organization), GO:0006996 (organelle organization), GO:0022613 (ribonucleoprotein complex biogenesis), GO:0022607 (cellular component assembly), GO:0070925 (organelle assembly), GO:0065003 (protein-containing complex assembly), GO:0042254 (ribosome biogenesis), GO:0042274 (ribosomal small subunit biogenesis), GO:0022618 (ribonucleoprotein complex assembly), GO:0071826 (ribonucleoprotein complex subunit organization), GO:0000028 (ribosomal small subunit assembly), GO:0042255 (ribosome assembly), GO:0140694 (non-membrane-bounded organelle assembly)
Cellular Component (CC): GO:0005575 (cellular component), GO:0032991 (protein-containing complex), GO:0110165 (cellular anatomical entity), GO:1990904 (ribonucleoprotein complex), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0005829 (cytosol), GO:0005737 (cytoplasm), GO:0044391 (ribosomal subunit), GO:0043229 (intracellular organelle), GO:0022626 (cytosolic ribosome), GO:0043228 (non-membrane-bounded organelle), GO:0022627 (cytosolic small ribosomal subunit), GO:0015935 (small ribosomal subunit), GO:0043232 (intracellular non-membrane-bounded organelle), GO:0005840 (ribosome)
Protein: E-cadherin (Q95LE0)
Organism: Canis lupus familiaris (Dog) (Canis familiaris)
Function: Not known
Subcellular location: Cell membrane {ECO:0000256|ARBA:ARBA00004236}.
Sequence: MGPRYGGAPALLLPLLLLLQVSSGLCQEPEPCRPGFGADSYTFTVPRRHLERGRVLGRVSFEGCTGLPRTAYVSDDTRFKVGTDGVITVKRPLQLHKPEISFLVHAWDSSRRKLSTRVRLKAATHHHHHHHDAPSKTQTEVLTFPSSQHGLRRQKRDWVIPPISCPENEKGPFP
InterPro domains: - IPR014868: Cadherin prodomain (domain) [31-120]
- IPR015919: Cadherin-like superfamily (homologous_superfamily) [31-174]
Gene Ontology annotations:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0005515 (protein binding)
Biological Process (BP): GO:0008150 (biological process), GO:0050896 (response to stimulus), GO:0009987 (cellular process), GO:0009605 (response to external stimulus), GO:0042221 (response to chemical), GO:0007163 (establishment or maintenance of cell polarity), GO:0051716 (cellular response to stimulus), GO:0007584 (response to nutrient), GO:0070887 (cellular response to chemical stimulus), GO:0048729 (tissue morphogenesis), GO:0009991 (response to extracellular stimulus), GO:0071496 (cellular response to external stimulus), GO:0031667 (response to nutrient levels), GO:0031670 (cellular response to nutrient), GO:0031669 (cellular response to nutrient levels)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0071944 (cell periphery), GO:0030312 (external encapsulating structure), GO:0031012 (extracellular matrix), GO:0062023 (collagen-containing extracellular matrix)
Protein: Protein VASCULAR ASSOCIATED DEATH 1, chloroplastic (F4HVW5)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Involved in ethylene- and salicylic acid-dependent cell death control associated with cells in the vicinity of vascular bundles.
Subcellular location: Membrane {ECO:0000255}; Single-pass membrane protein {ECO:0000255}. Plastid, chloroplast {ECO:0000255}.
Sequence: MAMLSTASVSGSVDLPRGTMKVDSSASPEVVSDLPPSSPKGSPDRHDPSTSSPSPSRGGDNQSEVISKSEEYRQLFRLPADEILVQDFNCACQESILMQGHMYLFIHYICFYSNIFGYETKKIIPFAEISCVKRAKTAGIFPNAIEILAGGKKYFFASFLSRDEAFKLIHDGWLEYGSAVKSEGEILVTEPQVSDGVVKRARSSMDLANELDIPVRDETLHLSSSSSLPVISQNGVPPSSVQRHAEPDVDVVAANTFNWKPEDTDAPKLSSDFTKVAEAKFSIPVEEFFRLFFSDGAVSFVESFHKNCGDKEFRCTSWQPHEKLGHTRNVSFQHPIKIYFGAKFGGCQESQKFRMYRNSHLVIETSQEISDVPYADYFTVEGVWDLKRDCRDSVEGCILDVYVNVAFSKRTVWKGKIVQSTLEECREAYAHWIRMAHELLKQKKLENQEGNKLIEDGEPLAAREERVSECDEEGKVEMVGEGVVKKSLKEAWVNLTSFVKRQSGTRQVIVLAFAVILLMQVTIVVLLKKGGGGQVEYHERYDEYSVNGETLGWLEKRMHFLREEMMMVEDRLQRMRQDHAALKAQFHHLERLLRRNKQ
InterPro domains: - IPR004182: GRAM domain (domain) [70-172]
- IPR031968: VASt domain (domain) [272-444]
- IPR011993: PH-like domain superfamily (homologous_superfamily) [68-175]
Interaction partners: - Two pore calcium channel protein 1
- non-specific serine/threonine protein kinase
- Disease resistance-like protein DSC2
- GEM-like protein 1
Gene Ontology annotations:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0097159 (organic cyclic compound binding), GO:1901363 (heterocyclic compound binding), GO:0003676 (nucleic acid binding), GO:0003723 (RNA binding), GO:0003729 (mRNA binding)
Biological Process (BP): GO:0008150 (biological process), GO:0050896 (response to stimulus), GO:0044419 (biological process involved in interspecies interaction between organisms), GO:0009605 (response to external stimulus), GO:0051707 (response to other organism), GO:0009607 (response to biotic stimulus), GO:0006950 (response to stress), GO:0006952 (defense response), GO:0009620 (response to fungus), GO:0098542 (defense response to other organism), GO:0043207 (response to external biotic stimulus), GO:0050832 (defense response to fungus)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0016020 (membrane), GO:0044232 (organelle membrane contact site), GO:0031984 (organelle subcompartment), GO:0071944 (cell periphery), GO:0005737 (cytoplasm), GO:0012505 (endomembrane system), GO:0042175 (nuclear outer membrane-endoplasmic reticulum membrane network), GO:0031090 (organelle membrane), GO:0005783 (endoplasmic reticulum), GO:0043229 (intracellular organelle), GO:0043227 (membrane-bounded organelle), GO:0005886 (plasma membrane), GO:0098827 (endoplasmic reticulum subcompartment), GO:0043231 (intracellular membrane-bounded organelle), GO:0005789 (endoplasmic reticulum membrane)
Protein: Uncharacterized BCR (Q8NPY8)
Organism: Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / BCRC 11384 / CCUG 27702 / LMG 3730 / NBRC 12168 / NCIMB 10025 / NRRL B-2784 / 534)
Function: Not known
Sequence: MKKFFVAGAVLSSALVMAACSPANQSDSTSTSVETTSSSSTQVSDAVITTENAVVRASVEDSDMTAVFATLVNNSDDEINVSGFTADVDAASFEVHEVVDGVMQEKPGGFVIPAGESIELAPGGDHLMIMGLANPIEAGDEVTVTLELADGSEVKLDPIPARTIAAGDEDYGDLGTEGHEGH
InterPro domains: - IPR036182: Copper chaperone PCuAC superfamily (homologous_superfamily) [48-159]
- IPR007410: Copper chaperone PCuAC (family) [3-157]
Interaction partners: - Predicted iron-dependent peroxidase
- Uncharacterized protein, homolog of Cu resistance protein CopC
- Two-component system, response regulators consisting of a CheY-like receiver domain and a HTH DNA-binding domain
- Thiol-disulfide isomerase and thioredoxins
Gene Ontology annotations:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0043167 (ion binding)
Biological Process (BP): GO:0008150 (biological process), GO:0050896 (response to stimulus), GO:0009987 (cellular process), GO:0009605 (response to external stimulus), GO:0051716 (cellular response to stimulus), GO:0007154 (cell communication), GO:0006950 (response to stress), GO:0009991 (response to extracellular stimulus), GO:0071496 (cellular response to external stimulus), GO:0031668 (cellular response to extracellular stimulus), GO:0033554 (cellular response to stress), GO:0006974 (cellular response to DNA damage stimulus), GO:0009432 (SOS response)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0071944 (cell periphery), GO:0016020 (membrane), GO:0005886 (plasma membrane)
Protein: Glycoprotein endo-alpha-1,2-mannosidase (EC 3.2.1.130) (A7RDN7)
Organism: Cricetulus griseus (Chinese hamster) (Cricetulus barabensis griseus)
Function: Not known
Subcellular location: Golgi apparatus membrane {ECO:0000256|ARBA:ARBA00004323}; Single-pass type II membrane protein {ECO:0000256|ARBA:ARBA00004323}.
Sequence: MAKFRRKTCIILSLFILFIFSLMMGLKMLRPNTSAFGTPFGLDLLPELHPPNAPLENKVDFQKSDRINMETNTKDLKAAVETVQPPKASEVNLEELPPLNYFLHVFYYSWYGNPQFDGKYIHWNHPVLEHWDPRIAKNYPQGIHTPPDDIGSSFYPELGSYSSRDPSVIETHMRQMCSASIGVLALSCYPPDSNDENGEATDHLVPTILDKAHKYNLKVTFHVEPYSNRNDQNMYTNVKYIIDKYGSHPAFYRYKTRTGHSLPMFYIYDSYITKPNVWANLLTPSGSQSVRNSPYDGLFIALLVEEKHKNDILQSGFDGIYTYFATNGFTYGSSHQNWGNLKSFCDKNNLIFIPSVGPGYIDTSIRPWNTQNTRNRINGKYYEVGLSAALQTHPNLISITSFNEWHEGTQIEKAVPKRTTTTVYLDYRPHKPSYYLELTRKWPEKYSKERKTYALDQQLPTS
InterPro domains: - IPR026071: Glycosyl hydrolase family 99 (family) [1-453]
Gene Ontology annotations:
Molecular Function (MF): GO:0003674 (molecular function), GO:0003824 (catalytic activity), GO:0016787 (hydrolase activity), GO:0016798 (hydrolase activity, acting on glycosyl bonds), GO:0004553 (hydrolase activity, hydrolyzing O-glycosyl compounds), GO:0015923 (mannosidase activity), GO:0004559 (alpha-mannosidase activity)
Biological Process (BP): GO:0008150 (biological process), GO:0008152 (metabolic process), GO:0009987 (cellular process), GO:0044238 (primary metabolic process), GO:0044237 (cellular metabolic process), GO:0071704 (organic substance metabolic process), GO:0006807 (nitrogen compound metabolic process), GO:1901564 (organonitrogen compound metabolic process), GO:0044260 (cellular macromolecule metabolic process), GO:0043170 (macromolecule metabolic process), GO:1901135 (carbohydrate derivative metabolic process), GO:0019538 (protein metabolic process), GO:0009100 (glycoprotein metabolic process), GO:0006491 (N-glycan processing)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0005737 (cytoplasm), GO:0016020 (membrane), GO:0012505 (endomembrane system), GO:0031090 (organelle membrane), GO:0005794 (Golgi apparatus), GO:0043229 (intracellular organelle), GO:0043227 (membrane-bounded organelle), GO:0098588 (bounding membrane of organelle), GO:0000139 (Golgi membrane), GO:0043231 (intracellular membrane-bounded organelle)
Protein: D-gluconate dehydratase (EC 4.2.1.39) (Q704D2)
Organism: Thermoproteus tenax
Function: Involved in the degradation of glucose via the Entner-Doudoroff pathway. Catalyzes the dehydration of gluconate to produce 2-keto-3-deoxygluconate (KDG). It is not able to use D-galactonate as substrate.
Sequence: MASAMASSALREATCTMTRLAADVAASVSSIFSCKDSAGPRPVVPATKTTSTPLDVMFFTWFAKSSGSSLPPLKVVMTGATISIDSTRGALKKLARKGIKGWLNQYMATIKEIEPIVLYEQETDARWASYSILVRVVTSDGRVSYGEAVPTLRILPVVSAVRQTARAFLGRDPHEISAAFYEWYRQDFFLSRSFESATALSAIDMALWDLKARELGAPLYELLGGKLRDRVKVYANGWYGGCRDPQCFAEKAKEVVARGYDALKFDPFGPSFNSITSEELRRAEEAVAAVRDAVGDDVDILIEHHGRFNANAAVEIAKRFEPYRPYFMEEPLHHEDIEGYRKYRSLTSARIAMGERLISAKEALQYLVEGLVDVIQPDACNIGGVTGSMKVAALAEAFSVEVSYHNAYGPVQFALEVQLSAVTPTLYRLESFYDYWPQWKRDLIGDPFRLSQSSVEVPRGPGIGVAVNERVLEKYRAEPSEIPVGEEPVWVVRGTWR
InterPro domains: - IPR029065: Enolase C-terminal domain-like (domain) [248-470]
- IPR018110: Mandelate racemase/muconate lactonizing enzyme, conserved site (conserved_site) [199-224]
- IPR013341: Mandelate racemase/muconate lactonizing enzyme, N-terminal domain (domain) [132-224]
- IPR034599: Gluconate dehydratase (family) [109-497]
- IPR013342: Mandelate racemase/muconate lactonizing enzyme, C-terminal (domain) [245-350]
- IPR029017: Enolase-like, N-terminal (homologous_superfamily) [111-472]
- IPR034593: D-galactonate dehydratase DgoD-like (family) [109-478]
- IPR036849: Enolase-like, C-terminal domain superfamily (homologous_superfamily) [212-478]
Gene Ontology annotations:
Molecular Function (MF): GO:0003674 (molecular function), GO:0003824 (catalytic activity), GO:0016829 (lyase activity), GO:0016835 (carbon-oxygen lyase activity), GO:0016836 (hydro-lyase activity)
Biological Process (BP): GO:0008150 (biological process), GO:0008152 (metabolic process), GO:0009987 (cellular process), GO:0009056 (catabolic process), GO:0044237 (cellular metabolic process), GO:0044238 (primary metabolic process), GO:0071704 (organic substance metabolic process), GO:1901575 (organic substance catabolic process), GO:0044248 (cellular catabolic process), GO:0005975 (carbohydrate metabolic process), GO:0044262 (cellular carbohydrate metabolic process), GO:0016052 (carbohydrate catabolic process), GO:0044275 (cellular carbohydrate catabolic process)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0005737 (cytoplasm), GO:0043229 (intracellular organelle), GO:0043227 (membrane-bounded organelle), GO:0009536 (plastid), GO:0043231 (intracellular membrane-bounded organelle)
Protein: Calcium-binding protein 4a (Q54RF4)
Organism: Dictyostelium discoideum (Social amoeba)
Function: Not known
Sequence: MVTKKEFLEDLTNATNEMIKAGDKNGDNQLSKKELYELFKKCKYPNPTLVTNSLLELFDLDKDGKLSVNEVKTALLVDYIIEAETCLKKFVDSIFKADSNKDNKITWDEARQFFVTSGSNEAQAKVFANSMFEDVDSDDDKCITREELREYAIEYYEIYPTE
InterPro domains: - IPR011992: EF-hand domain pair (homologous_superfamily) [17-153]
- IPR018247: EF-Hand 1, calcium-binding site (binding_site) [23-148]
- IPR002048: EF-hand domain (domain) [10-158]
Interaction partners: - Nucleomorphin
- Probable serine/threonine-protein kinase roco11
- Probable serine/threonine-protein kinase roco6
- Probable serine/threonine-protein kinase roco5
- Probable serine/threonine-protein kinase qkgA
- Probable serine/threonine-protein kinase roco8
- Protein BUD31 homolog
Gene Ontology annotations:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0043167 (ion binding), GO:0043169 (cation binding), GO:0046872 (metal ion binding), GO:0005509 (calcium ion binding)
Biological Process (BP): GO:0008150 (biological process), GO:0032502 (developmental process), GO:0051703 (biological process involved in intraspecies interaction between organisms), GO:0099120 (socially cooperative development), GO:0048856 (anatomical structure development), GO:0030587 (sorocarp development)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0071944 (cell periphery), GO:0030312 (external encapsulating structure), GO:0031012 (extracellular matrix)
Protein: Large ribosomal subunit protein mL46 (39S ribosomal protein L46, mitochondrial) (L46mt) (MRP-L46) (Q9EQI8)
Organism: Mus musculus (Mouse)
Function: Not known
Subcellular location: Mitochondrion {ECO:0000250|UniProtKB:Q9H2W6}.
Sequence: MAAPVGRTLLGLARGWRQLDRFWAGSSRGLSLEAASSSSRSPWRLSGALCLQRPPLITKALTPLQEEMAGLLQQIEVERSLYSDHELRALDEAQRLAKKKADLYDEEQEQGITLAQDLEDMWEQAFLQFRPGARETEADKKNDRTSLHRKLDRNLVLLVREKLGDQDVWMLPQVEWQPGETLRGTAERILATLSENNMEAKFLGNAPCGHYKFKFPKAIQTESDLGVKVFFFKALLLTGDFVQAGKKSRHVWASKEELGDYLQPKYLAQVRRFLLDSDGLSCL
InterPro domains: - IPR033650: Large ribosomal subunit protein mL46, NUDIX domain (domain) [134-273]
- IPR021757: Large ribosomal subunit protein mL46, N-terminal (domain) [43-139]
- IPR040008: Large ribosomal subunit protein mL46 (family) [33-276]
- IPR015797: NUDIX hydrolase-like domain superfamily (homologous_superfamily) [152-276]
Interaction partners: - 39S ribosomal protein L40
- Large ribosomal subunit protein uL16m
- Small ribosomal subunit protein uS11m
- Large ribosomal subunit protein bL21m
- Large ribosomal subunit protein uL3m
- Large ribosomal subunit protein bL27m
- Large ribosomal subunit protein mL44
- Small ribosomal subunit protein uS15m
- Large ribosomal subunit protein bL36m
- Large ribosomal subunit protein mL43
Gene Ontology annotations:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0005515 (protein binding)
Biological Process (BP): GO:0008150 (biological process), GO:0008152 (metabolic process), GO:0009987 (cellular process), GO:0009058 (biosynthetic process), GO:0044238 (primary metabolic process), GO:0044237 (cellular metabolic process), GO:0071704 (organic substance metabolic process), GO:0006807 (nitrogen compound metabolic process), GO:0044249 (cellular biosynthetic process), GO:0034641 (cellular nitrogen compound metabolic process), GO:0043603 (amide metabolic process), GO:1901564 (organonitrogen compound metabolic process), GO:1901576 (organic substance biosynthetic process), GO:0044260 (cellular macromolecule metabolic process), GO:0043170 (macromolecule metabolic process), GO:0019538 (protein metabolic process), GO:1901566 (organonitrogen compound biosynthetic process), GO:0006412 (translation), GO:0009059 (macromolecule biosynthetic process), GO:0043604 (amide biosynthetic process), GO:0044271 (cellular nitrogen compound biosynthetic process), GO:0034645 (cellular macromolecule biosynthetic process), GO:0006518 (peptide metabolic process), GO:0010467 (gene expression), GO:0140053 (mitochondrial gene expression), GO:0043043 (peptide biosynthetic process), GO:0032543 (mitochondrial translation)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0005737 (cytoplasm), GO:0043229 (intracellular organelle), GO:0005739 (mitochondrion), GO:0043227 (membrane-bounded organelle), GO:0043231 (intracellular membrane-bounded organelle)
Protein: C-type lectin domain family 18 member C (Mannose receptor-like protein 3) (Q8NCF0)
Organism: Homo sapiens (Human)
Function: Binds polysaccharidesin a Ca(2+)-independent manner with a preferentially binding to fucoidan, beta-glucans and galactans.
Subcellular location: Secreted {ECO:0000250|UniProtKB:A5D8T8}. Endoplasmic reticulum {ECO:0000305|PubMed:26170455}. Golgi apparatus {ECO:0000305|PubMed:26170455}. Endosome {ECO:0000305|PubMed:26170455}.
Sequence: MLHPETSPGRGHLLAVLLALLGTAWAEVWPPQLQEQAPMAGALNRKESFLLLSLHNRLRSWVQPPAADMRRLDWSDSLAQLAQARAALCGIPTPSLASGLWRTLQVGWNMQLLPAGLASFVEVVSLWFAEGQRYSHAAGECARNATCTHYTQLVWATSSQLGCGRHLCSAGQAAIEAFVCAYSPRGNWEVNGKTIVPYKKGAWCSLCTASVSGCFKAWDHAGGLCEVPRNPCRMSCQNHGRLNISTCHCHCPPGYTGRYCQVRCSLQCVHGRFREEECSCVCDIGYGGAQCATKVHFPFHTCDLRIDGDCFMVSSEADTYYRARMKCQRKGGVLAQIKSQKVQDILAFYLGRLETTNEVIDSDFETRNFWIGLTYKTAKDSFRWATGEHQAFTSFAFGQPDNHGFGNCVELQASAAFNWNNQRCKTRNRYICQFAQEHISRWGPGS
InterPro domains: - IPR001283: Cysteine-rich secretory protein-related (family) [51-204]
- IPR016186: C-type lectin-like/link domain superfamily (homologous_superfamily) [296-434]
- IPR018378: C-type lectin, conserved site (conserved_site) [408-432]
- IPR016187: C-type lectin fold (homologous_superfamily) [303-436]
- IPR001304: C-type lectin-like (domain) [297-434]
- IPR035940: CAP superfamily (homologous_superfamily) [14-225]
- IPR000742: EGF-like domain (domain) [228-292]
- IPR014044: CAP domain (domain) [44-190]
Interaction partners: - Trifunctional purine biosynthetic protein adenosine-3
Gene Ontology annotations:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0030246 (carbohydrate binding), GO:0005515 (protein binding), GO:0030247 (polysaccharide binding)
Biological Process (BP): GO:0008150 (biological process), GO:0051179 (localization), GO:0051234 (establishment of localization), GO:0006810 (transport), GO:0016192 (vesicle-mediated transport), GO:0006909 (phagocytosis)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0005615 (extracellular space), GO:0005737 (cytoplasm), GO:0012505 (endomembrane system), GO:0005576 (extracellular region), GO:0005794 (Golgi apparatus), GO:0005783 (endoplasmic reticulum), GO:0031410 (cytoplasmic vesicle), GO:0043229 (intracellular organelle), GO:0005768 (endosome), GO:0043227 (membrane-bounded organelle), GO:0043231 (intracellular membrane-bounded organelle), GO:0031982 (vesicle), GO:0097708 (intracellular vesicle)
Protein: SAFB like transcription modulator (H0YL55)
Organism: Homo sapiens (Human)
Function: Not known
Subcellular location: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
Sequence: MAAATGAVAASAASGQAEGKKITDLRVIDLKSELKRRNLDITGVKTVLISRLKQAIEEEGGDPDNIELTVSTDTPNKKPTKGKGKKHEADELSGDASVEDDAFIKDCELENQEAHEQDGNDELKDSEEFGENEEENVHSKELLSAEENKRAHELIEAEGIEDIEKEDIESQEIEAQEGEDDTFLTAQDGEEEENEKDSEASKPKDGQDAIAQSPEKESKDYEMNANHKD
InterPro domains: - IPR051738: Scaffold Attachment Factor and Modulators (family) [10-225]
- IPR003034: SAP domain (domain) [22-57]
- IPR036361: SAP domain superfamily (homologous_superfamily) [7-66]
Gene Ontology annotations:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0097159 (organic cyclic compound binding), GO:1901363 (heterocyclic compound binding), GO:0005515 (protein binding), GO:0003676 (nucleic acid binding), GO:0003677 (DNA binding), GO:0003723 (RNA binding), GO:0003690 (double-stranded DNA binding)
Biological Process (BP): GO:0008150 (biological process), GO:0065007 (biological regulation), GO:0050789 (regulation of biological process), GO:0019222 (regulation of metabolic process), GO:0050794 (regulation of cellular process), GO:0060255 (regulation of macromolecule metabolic process), GO:0031323 (regulation of cellular metabolic process), GO:0080090 (regulation of primary metabolic process), GO:0009889 (regulation of biosynthetic process), GO:0051171 (regulation of nitrogen compound metabolic process), GO:0019219 (regulation of nucleobase-containing compound metabolic process), GO:0051252 (regulation of RNA metabolic process), GO:0010556 (regulation of macromolecule biosynthetic process), GO:0010468 (regulation of gene expression), GO:0031326 (regulation of cellular biosynthetic process), GO:2001141 (regulation of RNA biosynthetic process), GO:0006355 (regulation of DNA-templated transcription), GO:1903506 (regulation of nucleic acid-templated transcription), GO:0006357 (regulation of transcription by RNA polymerase II)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0031974 (membrane-enclosed lumen), GO:0016604 (nuclear body), GO:0005654 (nucleoplasm), GO:0043233 (organelle lumen), GO:0043229 (intracellular organelle), GO:0043227 (membrane-bounded organelle), GO:0043231 (intracellular membrane-bounded organelle), GO:0070013 (intracellular organelle lumen), GO:0031981 (nuclear lumen), GO:0005634 (nucleus)