Protein: RNA polymerase sigma factor (O51712)
Organism: Borreliella burgdorferi (strain ATCC 35210 / DSM 4680 / CIP 102532 / B31) (Borrelia burgdorferi)
Function: Not known
Sequence: MNIFSNEDLNIYLKSVREHKLITHEEEIKLAGQIQRGNAKAKNKMINANLRLVLKIIKRYAGKGLKIEDLIQEGNLGLIRAAEKYDPNKNTKFSTYASFWIKQSLQRALNTKTRLVKVPYRKENLILQINKYLTEEEKSPKKEEIMKRFNLSPAQYIKIIPYLEKEYSLDKEIEGSENSTLLNLYEDNSFNPEITLEQDSTLKHLNYILETKLNEKERYIIKKRYNLDNSPKKSTLKDISTELGISSETVRQIEKRVLKKLKEEIN
InterPro domains: - IPR007627: RNA polymerase sigma-70 region 2 (domain) [45-114]
- IPR050239: Sigma-70 factor family, RNA polymerase initiation factors (family) [40-263]
- IPR013324: RNA polymerase sigma factor, region 3/4-like (homologous_superfamily) [173-265]
- IPR014284: RNA polymerase sigma-70-like domain (domain) [41-264]
- IPR013325: RNA polymerase sigma factor, region 2 (homologous_superfamily) [4-114]
- IPR000943: RNA polymerase sigma-70 (domain) [2-266]
- IPR009042: RNA polymerase sigma-70 region 1.2 (domain) [9-38]
- IPR007630: RNA polymerase sigma-70 region 4 (domain) [212-263]
Interaction partners: - DNA-directed RNA polymerase subunit alpha
- DNA-directed RNA polymerase, omega subunit
- Borrelia oxidative stress regulator protein BosR
- DNA-directed RNA polymerase subunit beta'
- Transcription factor, putative
- RNA polymerase sigma-54 factor
- Translational regulator CsrA
- Glycerol uptake facilitator
- Glycerol kinase
- Divergent polysaccharide deacetylase superfamily
Gene Ontology annotations:
Molecular Function (MF): GO:0003674 (molecular function), GO:0003824 (catalytic activity), GO:0016787 (hydrolase activity), GO:0016798 (hydrolase activity, acting on glycosyl bonds), GO:0004553 (hydrolase activity, hydrolyzing O-glycosyl compounds), GO:0004568 (chitinase activity)
Biological Process (BP): GO:0008150 (biological process), GO:0008152 (metabolic process), GO:0009987 (cellular process), GO:0009058 (biosynthetic process), GO:0044237 (cellular metabolic process), GO:0071704 (organic substance metabolic process), GO:0044238 (primary metabolic process), GO:0006807 (nitrogen compound metabolic process), GO:0044249 (cellular biosynthetic process), GO:0006725 (cellular aromatic compound metabolic process), GO:1901360 (organic cyclic compound metabolic process), GO:0034641 (cellular nitrogen compound metabolic process), GO:1901576 (organic substance biosynthetic process), GO:0006139 (nucleobase-containing compound metabolic process), GO:0043170 (macromolecule metabolic process), GO:0046483 (heterocycle metabolic process), GO:0009059 (macromolecule biosynthetic process), GO:1901362 (organic cyclic compound biosynthetic process), GO:0044271 (cellular nitrogen compound biosynthetic process), GO:0090304 (nucleic acid metabolic process), GO:0019438 (aromatic compound biosynthetic process), GO:0010467 (gene expression), GO:0018130 (heterocycle biosynthetic process), GO:0034654 (nucleobase-containing compound biosynthetic process), GO:0016070 (RNA metabolic process), GO:0032774 (RNA biosynthetic process), GO:0097659 (nucleic acid-templated transcription), GO:0006351 (DNA-templated transcription), GO:0006352 (DNA-templated transcription initiation)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005737 (cytoplasm), GO:0005829 (cytosol), GO:0005622 (intracellular anatomical structure)