wanglab/bioreason-pro-rl-reasoning-data huggingface dataset:
Protein: Large ribosomal subunit protein eL8 (60S ribosomal protein L7a) (Q966C6)
Organism: Caenorhabditis elegans
Function: Not known
Sequence: MPSKKVIKKKVAAVPAHIRAQTQVQKEVKNPLFEKRARNFNIGQDIQPKKDVTRFVKWPKYIRLQRQSAILQKRLKVPPTINQFRTALDSQSARQAFKLLDKYRPESTEAKKNRLRARAEARAAGKKEEVTKRPNTVRHGVNTITRLVETRRAQLVLIAHDVNPLEIVLHLPALCRKYNVPYAIIKGKASLGTVVRRKTTAAVALVDVNPEDKSALNKLVETVNNNFSERHEEIRKHWGGGVMSAKSDAKKLKIERARARDLGKL
InterPro domains: - IPR004038: Ribosomal protein eL8/eL30/eS12/Gadd45 (domain) [126-215]
- IPR029064: Ribosomal protein eL30-like superfamily (homologous_superfamily) [58-242]
- IPR018492: Ribosomal protein eL8/Nhp2 family (family) [137-196]
- IPR004037: Large ribosomal subunit protein eL8-like, conserved site (conserved_site) [175-192]
- IPR050257: Large ribosomal subunit protein eL8/uL1-like (family) [50-245]
- IPR001921: Large ribosomal subunit protein eL8, eukaryota (family) [37-246]
Interaction partners: - Large ribosomal subunit protein eL18
- Ubiquitin-like domain-containing protein
- Large ribosomal subunit protein eL24
- Small ribosomal subunit protein eS6
- Small ribosomal subunit protein eS17
- Small ribosomal subunit protein uS15
- Large ribosomal subunit protein uL4
- Small ribosomal subunit protein uS9
- Small ribosomal subunit protein uS5
- Small ribosomal subunit protein eS4
Gene Ontology annotations:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0005515 (protein binding)
Biological Process (BP): GO:0008150 (biological process), GO:0032501 (multicellular organismal process), GO:0008340 (determination of adult lifespan)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0005737 (cytoplasm), GO:0043229 (intracellular organelle), GO:0005739 (mitochondrion), GO:0043227 (membrane-bounded organelle), GO:0043231 (intracellular membrane-bounded organelle)
Protein: (thale cress) hypothetical protein (A0A178VTR0)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Not known
Sequence: MEMDSTTTIKPETLSTVSSSPPEKIHLRPMTLSDVDDFMVWATDSNVTRFCTWEPYTSREAAIAYLNDALLPHPWLRAICLDNDRPIGSISVTPVDEIRGEIGYVLGSKYWGKGIATEAVRLVAGEIFKEKPEMQRLEALVDVDNVGSQKVLEKVGFVKEGVMRKFMYLKGNVRDMVMFSFLPSDSLH
InterPro domains: - IPR016181: Acyl-CoA N-acyltransferase (homologous_superfamily) [23-182]
- IPR000182: GNAT domain (domain) [25-183]
Gene Ontology annotations:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0005515 (protein binding)
Biological Process (BP): GO:0008150 (biological process), GO:0050896 (response to stimulus), GO:0009719 (response to endogenous stimulus), GO:0042221 (response to chemical), GO:0010033 (response to organic substance), GO:0009725 (response to hormone), GO:1901700 (response to oxygen-containing compound), GO:0033993 (response to lipid), GO:0097305 (response to alcohol), GO:0009737 (response to abscisic acid)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005829 (cytosol), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0005737 (cytoplasm), GO:0012505 (endomembrane system), GO:0043229 (intracellular organelle), GO:0005783 (endoplasmic reticulum), GO:0043227 (membrane-bounded organelle), GO:0043231 (intracellular membrane-bounded organelle)
Protein: C-X-C motif chemokine 3 (GRO-gamma(1-73)) (Growth-regulated protein gamma) (GRO-gamma) (Macrophage inflammatory protein 2-beta) (MIP2-beta) [Cleaved into: GRO-gamma(5-73)] (P19876)
Organism: Homo sapiens (Human)
Function: Ligand for CXCR2 (By similarity). Has chemotactic activity for neutrophils. May play a role in inflammation and exert its effects on endothelial cells in an autocrine fashion. In vitro, the processed form GRO-gamma(5-73) shows a fivefold higher chemotactic activity for neutrophilic granulocytes.
Subcellular location: Secreted.
Sequence: MAHATLSAAPSNPRLLRVALLLLLLVAASRRAAGASVVTELRCQCLQTLQGIHLKNIQSVNVRSPGPHCAQTEVIATLKNGKKACLNPASPMVQKIIEKILNKGSTN
InterPro domains: - IPR033899: CXC Chemokine domain (domain) [40-102]
- IPR036048: Chemokine interleukin-8-like superfamily (homologous_superfamily) [22-103]
- IPR001089: CXC chemokine (family) [42-97]
- IPR018048: CXC chemokine, conserved site (conserved_site) [43-87]
- IPR001811: Chemokine interleukin-8-like domain (domain) [40-100]
- IPR039809: Chemokine beta/gamma/delta (family) [18-105]
Interaction partners: - C-X-C motif chemokine 5
- C-X-C chemokine receptor type 2
- C-X-C motif chemokine 6
- Growth-regulated alpha protein
- C-X-C chemokine receptor type 1
- Eotaxin
- C-X-C motif chemokine 2
- Cytokine SCM-1 beta
- C-X-C motif chemokine 10
- C-X-C motif chemokine 11
Gene Ontology annotations:
Molecular Function (MF): GO:0003674 (molecular function), GO:0098772 (molecular function regulator activity), GO:0005488 (binding), GO:0030545 (signaling receptor regulator activity), GO:0140677 (molecular function activator activity), GO:0005515 (protein binding), GO:0005102 (signaling receptor binding), GO:0030546 (signaling receptor activator activity), GO:0005126 (cytokine receptor binding), GO:0048018 (receptor ligand activity), GO:0001664 (G protein-coupled receptor binding), GO:0005125 (cytokine activity), GO:0042379 (chemokine receptor binding), GO:0008009 (chemokine activity)
Biological Process (BP): GO:0008150 (biological process), GO:0040011 (locomotion), GO:0002376 (immune system process), GO:0050896 (response to stimulus), GO:0044419 (biological process involved in interspecies interaction between organisms), GO:0009605 (response to external stimulus), GO:0006950 (response to stress), GO:0042221 (response to chemical), GO:0042330 (taxis), GO:0009607 (response to biotic stimulus), GO:0051707 (response to other organism), GO:0006955 (immune response), GO:0006952 (defense response), GO:0043207 (response to external biotic stimulus), GO:0006935 (chemotaxis), GO:0010033 (response to organic substance), GO:0009617 (response to bacterium), GO:0006959 (humoral immune response), GO:0098542 (defense response to other organism), GO:0002237 (response to molecule of bacterial origin), GO:0019730 (antimicrobial humoral response), GO:0006954 (inflammatory response), GO:0061844 (antimicrobial humoral immune response mediated by antimicrobial peptide)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005576 (extracellular region), GO:0005615 (extracellular space)
Protein: OsmC-like protein (Q583X0)
Organism: Trypanosoma brucei brucei (strain 927/4 GUTat10.1)
Function: Not known
Sequence: MRRSSMKFGLRQILSEELGKAAIFLRFKANEYIASTARACQTLTGAETNPEQANKRRKHRQVYEEILRQRQQVAQEAARRAMEGKSLRERLMASASAALKGLKEATSTNAGALALLQHCTAAHAAEVAVEQGIDVKSVTMQVEERKTGSQVGSETVVVGYIDAPNTSEEEMMAFAEQLSKKCPMANAMRGKIEWRRANGEVQHNDEQTTGNDNSVGSTSDKAGDAGSIPHGMPGTRYYSHESMRRGAGGVGDGDELHLPGVTKGSGKGPDK
InterPro domains: - IPR036102: OsmC/Ohr superfamily (homologous_superfamily) [90-195]
- IPR003718: OsmC/Ohr family (family) [113-193]
- IPR015946: K homology domain-like, alpha/beta (homologous_superfamily) [55-198]
Gene Ontology annotations:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0005515 (protein binding)
Biological Process (BP): GO:0008150 (biological process), GO:0050789 (regulation of biological process), GO:0065007 (biological regulation), GO:0019222 (regulation of metabolic process), GO:0060255 (regulation of macromolecule metabolic process), GO:0010468 (regulation of gene expression), GO:0010608 (post-transcriptional regulation of gene expression)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0005737 (cytoplasm), GO:0043229 (intracellular organelle), GO:0005739 (mitochondrion), GO:0043227 (membrane-bounded organelle), GO:0043231 (intracellular membrane-bounded organelle)
Protein: tryptophan--tRNA ligase (EC 6.1.1.2) (Tryptophanyl-tRNA synthetase) (A0A8I6ANK9)
Organism: Rattus norvegicus (Rat)
Function: Not known
Sequence: MALFSVRKARECWRFIRALHKGPTATAAPQKESGERVFSGIQPTGIPHLGNYLGAIESWVKLQEEYDTVIYSIVDLHSITVPQDPGILQQSILDMTAVLLACGIDPERSILFQQSQAKAARQKHDGTVGLLTYPVLQAADILCYKSTHVPVGEDQVQHMELVQDLARSFNQKYGELFPLPRSILTSMKKVKSLRDPSAKMSKSDPDKLATVQITDSPEEIVRKFRKAVTDFTSEVTYEPDSRPGVSNMVAIHAAVSGLSVEEVVRNSAGVDTARYKLLVADAVIEKFAPIRSEIEKLKMDKDHLRKVLLVGSAKAKELASPVFEEVKKLVGIL
InterPro domains: - IPR002305: Aminoacyl-tRNA synthetase, class Ic (family) [36-265]
- IPR001412: Aminoacyl-tRNA synthetase, class I, conserved site (conserved_site) [43-52]
- IPR050203: Tryptophan--tRNA ligase (family) [118-332]
- IPR014729: Rossmann-like alpha/beta/alpha sandwich fold (homologous_superfamily) [25-192]
- IPR002306: Tryptophan-tRNA ligase (family) [36-285]
Gene Ontology annotations:
Molecular Function (MF): GO:0003674 (molecular function), GO:0003824 (catalytic activity), GO:0016874 (ligase activity), GO:0140640 (catalytic activity, acting on a nucleic acid), GO:0140098 (catalytic activity, acting on RNA), GO:0016875 (ligase activity, forming carbon-oxygen bonds), GO:0004812 (aminoacyl-tRNA ligase activity), GO:0140101 (catalytic activity, acting on a tRNA)
Biological Process (BP): GO:0008150 (biological process), GO:0050789 (regulation of biological process), GO:0065007 (biological regulation), GO:0048518 (positive regulation of biological process), GO:0051094 (positive regulation of developmental process), GO:0050793 (regulation of developmental process), GO:0051240 (positive regulation of multicellular organismal process), GO:0051239 (regulation of multicellular organismal process), GO:2000026 (regulation of multicellular organismal development), GO:1904018 (positive regulation of vasculature development), GO:0022603 (regulation of anatomical structure morphogenesis), GO:1901342 (regulation of vasculature development), GO:0045766 (positive regulation of angiogenesis), GO:0045765 (regulation of angiogenesis)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0005737 (cytoplasm), GO:0043229 (intracellular organelle), GO:0005739 (mitochondrion), GO:0043227 (membrane-bounded organelle), GO:0043231 (intracellular membrane-bounded organelle)
Protein: HPt domain-containing protein (Q9HYQ0)
Organism: Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Function: Not known
Sequence: MSAPHLDDRVLASLQEVMEDEYPVLLDTFVLDSEERLRSLHAALQAGDAQALRHTAHSFKGGSSNMGAVLLAGYCKELEESARRGELQRAPALIEQMEREFAIVRILFKQERQRYR
InterPro domains: - IPR036641: HPT domain superfamily (homologous_superfamily) [1-113]
- IPR008207: Signal transduction histidine kinase, phosphotransfer (Hpt) domain (domain) [18-116]
Interaction partners: - Probable two-component response regulator
- histidine kinase
- Sensory/regulatory protein RpfC
- histidine kinase
- STAS domain-containing protein
- histidine kinase
- GfdT protein
- FimX
Gene Ontology annotations:
Molecular Function (MF): GO:0003674 (molecular function), GO:0003824 (catalytic activity), GO:0060089 (molecular transducer activity), GO:0016740 (transferase activity), GO:0140096 (catalytic activity, acting on a protein), GO:0004672 (protein kinase activity), GO:0016772 (transferase activity, transferring phosphorus-containing groups), GO:0016773 (phosphotransferase activity, alcohol group as acceptor), GO:0016301 (kinase activity)
Biological Process (BP): GO:0008150 (biological process), GO:0065007 (biological regulation), GO:0048518 (positive regulation of biological process), GO:0050789 (regulation of biological process), GO:0048583 (regulation of response to stimulus), GO:0023051 (regulation of signaling), GO:0023056 (positive regulation of signaling), GO:0048584 (positive regulation of response to stimulus), GO:0050794 (regulation of cellular process), GO:0048522 (positive regulation of cellular process), GO:0009967 (positive regulation of signal transduction), GO:0010647 (positive regulation of cell communication), GO:0009966 (regulation of signal transduction), GO:0010646 (regulation of cell communication)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0032991 (protein-containing complex), GO:0071944 (cell periphery), GO:0030312 (external encapsulating structure), GO:0005618 (cell wall), GO:0009277 (fungal-type cell wall)
Protein: GPI ethanolamine phosphate transferase 1 (EC 2.-.-.-) (A0A1W2PRH3)
Organism: Homo sapiens (Human)
Function: Not known
Subcellular location: Endoplasmic reticulum membrane {ECO:0000256|RuleBase:RU367138}; Multi-pass membrane protein {ECO:0000256|RuleBase:RU367138}.
Sequence: MLLFFTLGLLIHFVFFASIFDIYFTSPLVHGMTPQFTPLPPPARRLVLFVADGLRADALYELDENGNSRAPFIRNIIMHEGSWGISHTRVPTESRPGHVALIAGFYEDVSAVAKGWKENPVEFDSLFNESKYTWSWGSPDILPMFAKGASGDHVYTYSYDAKREDFGAQDATKLDTWVFDNVKDFFHHARNNQSLFSKINEEKIVFFLHLLGIDTNGHAHRPSSRDYKHNIKKVDDGVKEIVSMFNHFYGNDGKTTFIFTSDHGMTDWGSHGAGHPSETLTPLVTWGAGIKYPQRVSAQQFDDAFLKEWRLENWKRLDVNQGILPVDYLNNTDLFKAESMFTNAVQILEQFKVKMTQKKEVTLPFLFTPFNCAGS
InterPro domains: - IPR017850: Alkaline-phosphatase-like, core domain superfamily (homologous_superfamily) [44-340]
- IPR002591: Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase (family) [46-268]
- IPR037671: GPI ethanolamine phosphate transferase 1, N-terminal (domain) [40-321]
- IPR007070: GPI ethanolamine phosphate transferase 1 (family) [2-371]
Gene Ontology annotations:
Molecular Function (MF): GO:0003674 (molecular function), GO:0003824 (catalytic activity), GO:0016740 (transferase activity), GO:0016772 (transferase activity, transferring phosphorus-containing groups), GO:0016780 (phosphotransferase activity, for other substituted phosphate groups)
Biological Process (BP): GO:0008150 (biological process), GO:0008152 (metabolic process), GO:0009987 (cellular process), GO:0009058 (biosynthetic process), GO:0044237 (cellular metabolic process), GO:0006807 (nitrogen compound metabolic process), GO:0071704 (organic substance metabolic process), GO:0044238 (primary metabolic process), GO:1901576 (organic substance biosynthetic process), GO:1901564 (organonitrogen compound metabolic process), GO:0006629 (lipid metabolic process), GO:0019637 (organophosphate metabolic process), GO:0044255 (cellular lipid metabolic process), GO:0044249 (cellular biosynthetic process), GO:0006793 (phosphorus metabolic process), GO:0046470 (phosphatidylcholine metabolic process), GO:1901566 (organonitrogen compound biosynthetic process), GO:0046486 (glycerolipid metabolic process), GO:0006644 (phospholipid metabolic process), GO:0090407 (organophosphate biosynthetic process), GO:0006796 (phosphate-containing compound metabolic process), GO:0008610 (lipid biosynthetic process), GO:0045017 (glycerolipid biosynthetic process), GO:0006650 (glycerophospholipid metabolic process), GO:0008654 (phospholipid biosynthetic process), GO:0006656 (phosphatidylcholine biosynthetic process), GO:0046474 (glycerophospholipid biosynthetic process)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005829 (cytosol), GO:0005622 (intracellular anatomical structure), GO:0071944 (cell periphery), GO:0005737 (cytoplasm), GO:0016020 (membrane), GO:0005886 (plasma membrane)
Protein: Probable serine/threonine-protein kinase PBL23 (EC 2.7.11.1) (PBS1-like protein 23) (F4JEQ2)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: May be involved in plant defense signaling.
Subcellular location: Cell membrane {ECO:0000250|UniProtKB:O48814}; Lipid-anchor {ECO:0000250|UniProtKB:O48814}.
Sequence: MKINCLFCCMSHRRFNRRSSSRQSIKDCIDAKNNITTFDNISFKTDSSRRRYISEEIAKLGKGNISAHIFTFRELCVATKNFNPDNQLGEGGFGRVYKGQIETPEQVVAVKQLDRNGYQGNREFLVEVMMLSLLHHQNLVNLVGYCADGDQRILVYEYMQNGSLEDHLLELARNKKKPLDWDTRMKVAAGAARGLEYLHETADPPVIYRDFKASNILLDEEFNPKLSDFGLAKVGPTGGETHVSTRVMGTYGYCAPEYALTGQLTVKSDVYSFGVVFLEMITGRRVIDTTKPTEEQNLVTWASPLFKDRRKFTLMADPLLEGKYPIKGLYQALAVAAMCLQEEAATRPMMSDVVTALEYLAVTKTEEDGQTVEGEEEEEEDERSKL
InterPro domains: - IPR011009: Protein kinase-like domain superfamily (homologous_superfamily) [65-355]
- IPR017441: Protein kinase, ATP binding site (binding_site) [88-111]
- IPR008271: Serine/threonine-protein kinase, active site (active_site) [206-218]
- IPR000719: Protein kinase domain (domain) [82-360]
Interaction partners: - At4g12735
- F-box protein At5g03100
- Transmembrane protein, putative
- Beta-glucosidase 8
- Plant invertase/pectin methylesterase inhibitor superfamily protein
- Protein SODIUM POTASSIUM ROOT DEFECTIVE 2
- Amidophosphoribosyltransferase 3, chloroplastic
- Protein TRANSPARENT TESTA 9
- Amidophosphoribosyltransferase 1, chloroplastic
- UDP-galactose/UDP-glucose transporter 3
Gene Ontology annotations:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0005515 (protein binding)
Biological Process (BP): GO:0008150 (biological process), GO:0008152 (metabolic process), GO:0009987 (cellular process), GO:0044237 (cellular metabolic process), GO:0071704 (organic substance metabolic process), GO:0044238 (primary metabolic process), GO:0006807 (nitrogen compound metabolic process), GO:1901564 (organonitrogen compound metabolic process), GO:0019538 (protein metabolic process), GO:0043170 (macromolecule metabolic process), GO:0006793 (phosphorus metabolic process), GO:0036211 (protein modification process), GO:0006796 (phosphate-containing compound metabolic process), GO:0043412 (macromolecule modification), GO:0016310 (phosphorylation), GO:0006468 (protein phosphorylation), GO:0046777 (protein autophosphorylation)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0071944 (cell periphery), GO:0016020 (membrane), GO:0005886 (plasma membrane)
Protein: Peroxisomal (S)-2-hydroxy-acid oxidase GLO4 (EC 1.1.3.15) (Glycolate oxidase 4) (GOX 4) (OsGLO4) (Short chain alpha-hydroxy acid oxidase GLO4) (Q8H3I4)
Organism: Oryza sativa subsp. japonica (Rice)
Function: Oxidase that catalyzes the oxidation of a broad range of 2-hydroxyacids to the corresponding 2-oxoacids, with a reduction of O2 to H2O2. May be involved in a general medium- and long-chain fatty acid catabolic pathway such as alpha-oxidation.
Subcellular location: Peroxisome {ECO:0000250}.
Sequence: MEDNLPVNVREYQELAKKALPKMAYDYINGGAEDEHTLRENIAAYTRIILRPRVLVDVSKIDMSTTLLGYTMRSPIIVAPTGGHKLAHPEGEKATARAAASCNAIMVLSFSSSCKIEDVASSCNAIRFYQLYVYKNRNVSATLVRRAESCGFKALLLTVDTPMLGRREADIRNKMVFPRSGNLEGLMTTDDHDTTNGSQLERFARATLDPSLSWKDIEWLKSITSMPIFLKGIVTAEDARRAVEAGVAGVIVSNHGARQLDYAPATIAALEEVVRAVAGAVPVLVDGGIRRGTDVFKALALGARAVMVGRPVFFGLAARGEAGARHVIEMLNGELEVAMALCGCRSVGEITRSHVMTEGDRIRSLL
InterPro domains: - IPR000262: FMN-dependent dehydrogenase (domain) [16-355]
- IPR008259: FMN-dependent alpha-hydroxy acid dehydrogenase, active site (active_site) [253-259]
- IPR012133: Alpha-hydroxy acid dehydrogenase, FMN-dependent (family) [1-360]
- IPR037396: FMN hydroxy acid dehydrogenase domain (domain) [1-360]
- IPR013785: Aldolase-type TIM barrel (homologous_superfamily) [6-365]
Interaction partners: - alanine--glyoxylate transaminase
- Malate synthase
- Isocitrate lyase
- glycerate dehydrogenase
- Catalase isozyme C
- Os04g0107500 protein
- Os04g0106400 protein
- Alanine aminotransferase 2
- Catalase isozyme A
- Catalase isozyme B
Gene Ontology annotations:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0003824 (catalytic activity), GO:0005515 (protein binding), GO:0016491 (oxidoreductase activity), GO:0016614 (oxidoreductase activity, acting on CH-OH group of donors), GO:0016899 (oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor)
Biological Process (BP): GO:0008150 (biological process), GO:0008152 (metabolic process), GO:0050789 (regulation of biological process), GO:0065007 (biological regulation), GO:0009987 (cellular process), GO:0019222 (regulation of metabolic process), GO:0044237 (cellular metabolic process), GO:0050794 (regulation of cellular process), GO:0031323 (regulation of cellular metabolic process), GO:0043094 (cellular metabolic compound salvage), GO:0010109 (regulation of photosynthesis), GO:0009853 (photorespiration)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0005737 (cytoplasm), GO:0043229 (intracellular organelle), GO:0042579 (microbody), GO:0043227 (membrane-bounded organelle), GO:0043231 (intracellular membrane-bounded organelle), GO:0005777 (peroxisome)
Protein: Reaction center protein M chain (Photosynthetic reaction center M subunit) (A8ASG6)
Organism: Thermochromatium tepidum (Chromatium tepidum)
Function: Not known
Subcellular location: Cellular chromatophore membrane {ECO:0000256|RuleBase:RU364137}; Multi-pass membrane protein {ECO:0000256|RuleBase:RU364137}. Endomembrane system {ECO:0000256|ARBA:ARBA00004127}; Multi-pass membrane protein {ECO:0000256|ARBA:ARBA00004127}.
Sequence: MPEYQNIFTAVQVRAPAYPGVPLPKGNLPRIGRPIFSYWLGKIGDAQIGPIYLGLTGTLSIFFGLVAISIIGFNMLASVHWDVFQFLKHFFWLGLEPPPPQYGLRIPPLSEGGWWLMAGLFLTLSILLWWVRTYKRAEALGMSQHLSWAFAAAIFFYLVLGFIRPVMMGSWAKAVPFGIFPHLDWTAAFSIRYGNLYYNPFHMLSIAFLYGSALLFAMHGATILSVSRFGGDREIDQITHRGTAAERAALFWRWTMGFNVTMESIHRWAWWCAVLTVITAGIGILLSGTVVDNWYLWAVKHGMAPAYPEVVTAVNPYETAAEVMQ
InterPro domains: - IPR000484: Photosynthetic reaction centre, L/M (family) [51-303]
- IPR036854: Photosystem II protein D1/D2 superfamily (homologous_superfamily) [1-315]
- IPR005781: Photosynthetic reaction centre, M subunit (family) [1-308]
- IPR055265: Photosynthetic reaction centre, L/M, conserved site (conserved_site) [195-221]
Gene Ontology annotations:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0005515 (protein binding)
Biological Process (BP): GO:0008150 (biological process), GO:0008152 (metabolic process), GO:0009987 (cellular process), GO:0009058 (biosynthetic process), GO:0044237 (cellular metabolic process), GO:0071704 (organic substance metabolic process), GO:0042440 (pigment metabolic process), GO:0006807 (nitrogen compound metabolic process), GO:0044249 (cellular biosynthetic process), GO:0006725 (cellular aromatic compound metabolic process), GO:0034641 (cellular nitrogen compound metabolic process), GO:1901360 (organic cyclic compound metabolic process), GO:1901564 (organonitrogen compound metabolic process), GO:1901576 (organic substance biosynthetic process), GO:0046483 (heterocycle metabolic process), GO:0046148 (pigment biosynthetic process), GO:1901566 (organonitrogen compound biosynthetic process), GO:0015995 (chlorophyll biosynthetic process), GO:1901362 (organic cyclic compound biosynthetic process), GO:0044271 (cellular nitrogen compound biosynthetic process), GO:0033013 (tetrapyrrole metabolic process), GO:0019438 (aromatic compound biosynthetic process), GO:0018130 (heterocycle biosynthetic process), GO:0006778 (porphyrin-containing compound metabolic process), GO:0033014 (tetrapyrrole biosynthetic process), GO:0006779 (porphyrin-containing compound biosynthetic process), GO:0015994 (chlorophyll metabolic process)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0005737 (cytoplasm), GO:0043229 (intracellular organelle), GO:0043227 (membrane-bounded organelle), GO:0009536 (plastid), GO:0043231 (intracellular membrane-bounded organelle)