wanglab/bioreason-pro-rl-reasoning-data huggingface dataset:
Protein: Cytospin-A (E7FG55)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Function: Not known
Subcellular location: Cytoplasm, cytoskeleton, spindle {ECO:0000256|ARBA:ARBA00004186, ECO:0000256|RuleBase:RU367063}. Cytoplasm, cytoskeleton {ECO:0000256|RuleBase:RU367063}. Cell junction, gap junction {ECO:0000256|RuleBase:RU367063}.
Sequence: MKKATKPTAATSRTSVGTKAPGRSEGSSNMGTGGKMTNKTQSSAPLSKAKSSDDLPAVSAGSGSVSASNSNTTARNKRGSSSQITSNTETRSKTTSGLSGRRATSTVSKEPGLTRDNLRERSRTSVAKKPTDTMPQKRSRCRTLPDSESKMSKSRSDSQISHKAVLECQVNDLLGLAKSKDLEILHLRSELRGMRTQLGLEELEAPNQEQVSQETMQPPEKEVISATDVESTLLLLQDQNQGILDELNMLKSENRMLKDRLNALGFSLEQRLDSPEKSLRCLPMSPEHVVGGDSSSGGHSESVRGGMRASSAEGSAQGSTEDLLSEQRHLGSPDAVDSECSEAYQPITSSDDALDAPSGCGSSSESEGGLPSREHSRRGSSGNTSEVSVACLTERIHQMEENQHSTSEELQATLQELADLQQITQELSTENERLGEERAILVDSLCQQGERLELYGRQLEYFRGLLDEHCVAYVKDDEDAKSGRYVELERRYAELNEGSRFEREQLLGVQQQLSSALKMAEHENAEAQGLMAALKERVIMAERAVEIERRERAVAKAELEALRVLSEGEQVELNRCRIQLEQERQRVAQLLSIHNAGDKTDIRHLLESERLDKERAEAKAAQLKEELGHTRSEAAQLQEAISKLEDEFRAFRDDVQSQLAEQKRLLEQQCSELEEKDTEIADMKETIFELEDEVEQHRAVKLHDNLIISDLENSIKKLHDQKYDMEKEIKVLHRKLREESAEWRQFQADLQTAVIIANDIKTEAQEEIGDLRRRLQEAQEKNEKMNKELEELKSRKQDEERGRVYNYMNAVERDLAALRQGMGLSRRSSTSSEPSPTVKTLIKSFDSASQGPVQGSPTAAAAAVAAATAISRTPLSPSPVKTPPAAAVSPIQRHTISSKPLSSMLDKRPSFNDLNIPAEHLLRTSPVTRPGCPIQRVTNMDTSKAISVSRRSSEELKRDLLAPESSAPSSLMSSPQLSLSSNASSPTASITPTTRGRLREERKDPLSALAREYGGSKRNALLRWCQKKTEGYQNIDITNFSSSWNDGLAFCAILHTYLPAHIPYHELNSLDKRRNFTLAFQAAESVGIKSTLDIGEMVHTERPDWQSVMTYVTSIYKYFET
InterPro domains: - IPR001715: Calponin homology domain (domain) [1015-1120]
- IPR036872: CH domain superfamily (homologous_superfamily) [1014-1121]
- IPR050540: F-actin Monooxygenase Mical (family) [382-1120]
Gene Ontology annotations:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0005515 (protein binding), GO:0008013 (beta-catenin binding)
Biological Process (BP): GO:0008150 (biological process), GO:0032502 (developmental process), GO:0048856 (anatomical structure development), GO:0009653 (anatomical structure morphogenesis), GO:0060324 (face development), GO:0060322 (head development), GO:0060323 (head morphogenesis), GO:0060325 (face morphogenesis), GO:0010171 (body morphogenesis)
Cellular Component (CC): GO:0005575 (cellular component), GO:0032991 (protein-containing complex), GO:0110165 (cellular anatomical entity), GO:0005815 (microtubule organizing center), GO:0031941 (filamentous actin), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0005737 (cytoplasm), GO:0030054 (cell junction), GO:0099080 (supramolecular complex), GO:0099081 (supramolecular polymer), GO:0043229 (intracellular organelle), GO:0070161 (anchoring junction), GO:0043228 (non-membrane-bounded organelle), GO:0099512 (supramolecular fiber), GO:0005911 (cell-cell junction), GO:0043232 (intracellular non-membrane-bounded organelle), GO:0005856 (cytoskeleton), GO:0099513 (polymeric cytoskeletal fiber), GO:0005884 (actin filament), GO:0015629 (actin cytoskeleton), GO:0015630 (microtubule cytoskeleton)
Protein: Fibronectin-binding protein (Q93ED6)
Organism: Streptococcus equi subsp. equi
Function: Not known
Sequence: MKTKSFRKVLTTSATCIVLATSFAGGTLRVWAEQLYYGWNDGTRQSSPYFLYVSPKNAPKRELKDEYVVYCFNKKLYWPDQWESIYSNFNDIRSPYNDLPVYEKKLGYDGIFKQYAPDYKKDISDIASALVAVLSNGYPTNKSQLSTSYHLNNDSSRKVTQLAIWYFSDSLTKEYLKDTGGYNLNDMEKKALDFLISKGEDSKLKSEQSNYSLDIYVYQSGGHDHMKDYQNLLGSTLIPKEPLKPQLGGFSGHNGNGLSGLEGGSSGSQETNEDGKKGLIGFHGGLSGSEGKRDPFQD
InterPro domains: - IPR013552: Thioester domain (domain) [69-199]
- IPR023849: TQXA domain (domain) [130-172]
Gene Ontology annotations:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0005515 (protein binding)
Biological Process (BP): GO:0008150 (biological process), GO:0009987 (cellular process), GO:0008219 (cell death), GO:0012501 (programmed cell death), GO:0006915 (apoptotic process)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0016020 (membrane)
Protein: Probable inactive serine protease 37 (Probable inactive trypsin-X2) (Q9DAA4)
Organism: Mus musculus (Mouse)
Function: Plays a role in male fertility. May have a role in sperm migration or binding to zona-intact eggs. Involved in the activation of the proacrosin/acrosin system (By similarity).
Subcellular location: Cytoplasmic vesicle, secretory vesicle, acrosome {ECO:0000250|UniProtKB:A4D1T9}. Secreted {ECO:0000305}.
Sequence: MKLIIYLTILAGTALVTHSSVQKEDHAPYLAYLKSNFNPCVGVLIKASWVLAPSHCYLPNLRVMLGNFKSRVRDGTEQTIYPIQIIRYWNYSHTAPQDDLMLIKLAKPATFNHKVQVLPIATTNVRPGTVCTLSGLDWSQENNGRHPDLRQNLEAPVMTDKDCQKTQQGSSHRNSLCVRFVKVFSRIFGEVAVATVICKNKLQGIEVGHFMGGDVGIYTNIYSYVPWIEKTTKEKMT
InterPro domains: - IPR043504: Peptidase S1, PA clan, chymotrypsin-like fold (homologous_superfamily) [28-229]
- IPR009003: Peptidase S1, PA clan (homologous_superfamily) [23-233]
- IPR001254: Serine proteases, trypsin domain (domain) [9-233]
Interaction partners: - Inactive serine protease 54
- A disintegrin and metallopeptidase domain 3
- Serine protease 44
Gene Ontology annotations:
Molecular Function (MF): GO:0003674 (molecular function), GO:0003824 (catalytic activity), GO:0140096 (catalytic activity, acting on a protein), GO:0016787 (hydrolase activity), GO:0017171 (serine hydrolase activity), GO:0008233 (peptidase activity), GO:0008236 (serine-type peptidase activity), GO:0004175 (endopeptidase activity), GO:0004252 (serine-type endopeptidase activity)
Biological Process (BP): GO:0008150 (biological process), GO:0032502 (developmental process), GO:0032501 (multicellular organismal process), GO:0048856 (anatomical structure development), GO:0007275 (multicellular organism development), GO:0060322 (head development), GO:0048731 (system development), GO:0048513 (animal organ development), GO:0007420 (brain development), GO:0007417 (central nervous system development), GO:0007399 (nervous system development)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005576 (extracellular region), GO:0005615 (extracellular space)
Protein: Replication enhancer protein (REn) (Protein AC3) (Protein AL3) (P03563)
Organism: Tomato golden mosaic virus (strain Yellow vein) (TGMV)
Function: Increases viral DNA accumulation. Enhances infectivity and symptom expression (By similarity).
Sequence: MDSRTGEPITVPQAENGVYIWEITNPLYFKIISVEDPLYTNTRIYHLQIRFNHNLRRALDLHKAFLNFQVWTTSTTASGRTYLNRFKYLVMLYLEQLGVICINNVIRAVRFATDRSYITHVLENHSIKYKFY
InterPro domains: - IPR000657: Geminivirus AL3 coat protein (family) [2-120]
Gene Ontology annotations:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0005515 (protein binding)
Biological Process (BP): GO:0008150 (biological process), GO:0008152 (metabolic process), GO:0009987 (cellular process), GO:0016032 (viral process), GO:0009058 (biosynthetic process), GO:0044237 (cellular metabolic process), GO:0019058 (viral life cycle), GO:0006807 (nitrogen compound metabolic process), GO:0019079 (viral genome replication), GO:0071704 (organic substance metabolic process), GO:0044238 (primary metabolic process), GO:1901360 (organic cyclic compound metabolic process), GO:1901576 (organic substance biosynthetic process), GO:0039693 (viral DNA genome replication), GO:0006139 (nucleobase-containing compound metabolic process), GO:0046483 (heterocycle metabolic process), GO:0044249 (cellular biosynthetic process), GO:0006725 (cellular aromatic compound metabolic process), GO:0034641 (cellular nitrogen compound metabolic process), GO:0044260 (cellular macromolecule metabolic process), GO:0043170 (macromolecule metabolic process), GO:0009059 (macromolecule biosynthetic process), GO:1901362 (organic cyclic compound biosynthetic process), GO:0090304 (nucleic acid metabolic process), GO:0019438 (aromatic compound biosynthetic process), GO:0018130 (heterocycle biosynthetic process), GO:0006259 (DNA metabolic process), GO:0044271 (cellular nitrogen compound biosynthetic process), GO:0039687 (viral DNA strand displacement replication), GO:0034654 (nucleobase-containing compound biosynthetic process), GO:0071897 (DNA biosynthetic process)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0018995 (host cellular component), GO:0033643 (host cell part), GO:0043657 (host cell), GO:0033646 (host intracellular part), GO:0043656 (host intracellular region), GO:0033647 (host intracellular organelle), GO:0030430 (host cell cytoplasm), GO:0033648 (host intracellular membrane-bounded organelle), GO:0042025 (host cell nucleus)
Protein: Virion infectivity factor (Vif) (SOR protein) [Cleaved into: p17; p7] (Q77YG0)
Organism: Human immunodeficiency virus type 1 (HIV-1)
Function: Not known
Subcellular location: Host cell membrane {ECO:0000256|ARBA:ARBA00004501, ECO:0000256|HAMAP-Rule:MF_04081}; Peripheral membrane protein {ECO:0000256|ARBA:ARBA00004501, ECO:0000256|HAMAP-Rule:MF_04081}; Cytoplasmic side {ECO:0000256|ARBA:ARBA00004501, ECO:0000256|HAMAP-Rule:MF_04081}. Host cytoplasm {ECO:0000256|HAMAP-Rule:MF_04081}. Virion {ECO:0000256|ARBA:ARBA00004328, ECO:0000256|HAMAP-Rule:MF_04081}. Note=In the cytoplasm, seems to colocalize with intermediate filament vimentin. A fraction is associated with the cytoplasmic side of cellular membranes, presumably via the interaction with Pr55Gag precursor. Incorporated in virions at a ratio of approximately 7 to 20 molecules per virion. {ECO:0000256|HAMAP-Rule:MF_04081}.
Sequence: MENRWQVMIVWQVDRMRIRTWKSLVKHHMYVSGKARGWFYRHHYESPHPRISSEVHIPLGDARLVITTYWGLHTGERDWHLGQGVSIEWRKKRYSTQVDPELADQLIHLYYFDCFSDSAIRKALLGHIVSPRCEYQAGHNKVGSLQYLALAALITPKKIKPPLPSVTKLTEDRWNKPQKTKGHRGSHTMNGH
InterPro domains: - IPR000475: Retroviral Vif (Viral infectivity) protein (family) [1-192]
Gene Ontology annotations:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0005515 (protein binding)
Biological Process (BP): GO:0008150 (biological process), GO:0016032 (viral process), GO:0019079 (viral genome replication), GO:0019058 (viral life cycle)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0032991 (protein-containing complex), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0140535 (intracellular protein-containing complex), GO:0043229 (intracellular organelle), GO:0043227 (membrane-bounded organelle), GO:0043231 (intracellular membrane-bounded organelle), GO:0005634 (nucleus)
Protein: Keratin 13 (K7ERE3)
Organism: Homo sapiens (Human)
Function: Not known
Sequence: MSLRLQSSSASYGGGFGGGSCQLGGGRGVSTCSTRFVSGGSAGGYGGGVSCGFGGGAGSGFGGGYGGGLGGGYGGGLGGGFGGGFAGGFVDFGACDGGLLTGNEKITMQNLNDRLASYLEKVRALEEANADLEVKIRDWHLKQSPASPERDYSPYYKTIEELRDKILTATIENNRVILEIDNARLAADDFRLKYENELALRQSVEADINGLRRVLDELTLSKTDLEMQIESLNEELAYMKKNHEEEMKEFSNQVVGQVNVEMDATPGIDLTRVLAEMREQYEAMAERNRRDAEEWFHTKSAELNKEVSTNTAMIQTSKTEITELRRTLQGLEIELQSQLSMKAGLENTVAETECRYALQLQQIQGLISSIEAQLSELRSEMECQNQEYKMLLDIKTRLEQEIATYRSLLEGQDAK
InterPro domains: - IPR018039: Intermediate filament protein, conserved site (conserved_site) [402-410]
- IPR002957: Keratin, type I (family) [9-412]
- IPR039008: Intermediate filament, rod domain (domain) [103-415]
Gene Ontology annotations:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0005515 (protein binding)
Biological Process (BP): GO:0008150 (biological process), GO:0009987 (cellular process), GO:0071840 (cellular component organization or biogenesis), GO:0016043 (cellular component organization), GO:0006996 (organelle organization), GO:0007010 (cytoskeleton organization)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0005615 (extracellular space), GO:0005829 (cytosol), GO:0005737 (cytoplasm), GO:0005576 (extracellular region), GO:0099080 (supramolecular complex), GO:0099081 (supramolecular polymer), GO:0043230 (extracellular organelle), GO:0043229 (intracellular organelle), GO:0070062 (extracellular exosome), GO:0043227 (membrane-bounded organelle), GO:0043228 (non-membrane-bounded organelle), GO:0065010 (extracellular membrane-bounded organelle), GO:0043231 (intracellular membrane-bounded organelle), GO:0099512 (supramolecular fiber), GO:0031982 (vesicle), GO:0043232 (intracellular non-membrane-bounded organelle), GO:0005856 (cytoskeleton), GO:0099513 (polymeric cytoskeletal fiber), GO:1903561 (extracellular vesicle), GO:0005634 (nucleus), GO:0005882 (intermediate filament), GO:0045111 (intermediate filament cytoskeleton), GO:0045095 (keratin filament)
Protein: WD repeat domain-containing protein 83 (Mitogen-activated protein kinase organizer 1) (Q9VJL9)
Organism: Drosophila melanogaster (Fruit fly)
Function: Not known
Subcellular location: Cytoplasm {ECO:0000256|ARBA:ARBA00004496}.
Sequence: MPEFENFNVKTTIDCKQGAVRAVRYNVDGTYCLSCGSDKKIKLWNPASGLLLKTYGGHADEVTDAAGSCDSSYIVSASLDKSIIYWDVSTGAPVRRLRSHAGGVRCVCFNEDSSIAISGGRDNAVMCWDIRTRRLDPVQVMKEARDCITTVATNENRIYAASLDGCVRTYDIRVGELTCDKIGEPITYLAQTRDEQCLVAGCQDSVVRLLDCETGGLLSEYRGHRGDDYHIECGILSNDAQIVTGSSDGDAFVYDLLDGKVLQRIRISDNGGVVHSLATHPKRQEMLFARRRDMYVFSTDLQIEEEQL
InterPro domains: - IPR001680: WD40 repeat (repeat) [6-255]
- IPR020472: PAC1/LIS1-like, WD-40 repeat (repeat) [32-130]
- IPR015943: WD40/YVTN repeat-like-containing domain superfamily (homologous_superfamily) [2-298]
- IPR036322: WD40-repeat-containing domain superfamily (homologous_superfamily) [4-286]
- IPR051980: WD repeat domain-containing protein MORG1 (family) [9-294]
Interaction partners: - Splicing factor 3B subunit 4
- Pre-mRNA-processing-splicing factor 8
- G patch domain-containing protein 1 homolog
- Ragulator complex protein LAMTOR3 homolog
- Ragulator complex protein LAMTOR2 homolog
Gene Ontology annotations:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0005515 (protein binding)
Biological Process (BP): GO:0008150 (biological process), GO:0065007 (biological regulation), GO:0050896 (response to stimulus), GO:0050789 (regulation of biological process), GO:0044419 (biological process involved in interspecies interaction between organisms), GO:0048583 (regulation of response to stimulus), GO:0009605 (response to external stimulus), GO:0023051 (regulation of signaling), GO:0006950 (response to stress), GO:0042221 (response to chemical), GO:0009607 (response to biotic stimulus), GO:0051707 (response to other organism), GO:0050794 (regulation of cellular process), GO:0006952 (defense response), GO:1901700 (response to oxygen-containing compound), GO:0043207 (response to external biotic stimulus), GO:0010646 (regulation of cell communication), GO:0010033 (response to organic substance), GO:0010646 (regulation of cell communication), GO:0009620 (response to fungus), GO:0009617 (response to bacterium), GO:0009966 (regulation of signal transduction), GO:0002237 (response to molecule of bacterial origin), GO:0032496 (response to lipopolysaccharide), GO:0006954 (inflammatory response), GO:0090594 (inflammatory response to wounding), GO:0033993 (response to lipid), GO:1902531 (regulation of intracellular signal transduction), GO:0007507 (heart development), GO:0043122 (regulation of I-kappaB kinase/NF-kappaB signaling)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0032991 (protein-containing complex), GO:1990904 (ribonucleoprotein complex), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0140513 (nuclear protein-containing complex), GO:0043229 (intracellular organelle), GO:0005681 (spliceosomal complex), GO:0043227 (membrane-bounded organelle), GO:0071011 (precatalytic spliceosome), GO:0043231 (intracellular membrane-bounded organelle), GO:0005634 (nucleus)
Protein: Protein commissureless 1 (Protein commissureless) (Q24139)
Organism: Drosophila melanogaster (Fruit fly)
Function: Controls axon guidance across the CNS midline by preventing the delivery of Robo to the growth cone.
Subcellular location: Cytoplasmic vesicle membrane {ECO:0000305}; Single-pass membrane protein {ECO:0000305}. Cell membrane {ECO:0000305}; Single-pass membrane protein {ECO:0000305}.
Sequence: MISTTDYPTVETTTTAEELYAEYISAPASSMSPAAIAEHLQQNQITFEIPSAHDLRHIDALNSFNALLQRIGNAAVSYDPAPPSGWSPDGSISTEQLSKSVVLDLADLRDRSEESGESSWWSQIFGDADMHVIINYLWIGVVSSLVILSLVFILFSCYFYRKFRTWKKCNKDIRAQIHAASDSYSSHLVGCDASRLLLHQQMQHPHHRSSEAGFYQIESPPCYTIATGLPSYDEALHHQPRHFAYGMKFVYPSLAAVHHHHHCISNWEKQEPLNKLQKCKLSAAAAVEEDKADSSSSTSASASPSSSESSNLATATPAICINMPSGRQDEEVDNSDSDSAIAVAVAVAQSLQPAAPADDDCASLVVVVAA
InterPro domains: - IPR031878: Commissureless (family) [129-262]
Interaction partners: - Roundabout 1, isoform A
- E3 ubiquitin-protein ligase Nedd-4
- Roundabout 2, isoform B
- LP22668p
Gene Ontology annotations:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0005515 (protein binding)
Biological Process (BP): GO:0008150 (biological process), GO:0032501 (multicellular organismal process), GO:0032502 (developmental process), GO:0007275 (multicellular organism development), GO:0048856 (anatomical structure development), GO:0048731 (system development), GO:0007399 (nervous system development)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0005737 (cytoplasm), GO:0012505 (endomembrane system), GO:0031410 (cytoplasmic vesicle), GO:0043229 (intracellular organelle), GO:0005768 (endosome), GO:0043227 (membrane-bounded organelle), GO:0005769 (early endosome), GO:0031982 (vesicle), GO:0043231 (intracellular membrane-bounded organelle), GO:0097708 (intracellular vesicle)
Protein: rRNA-processing protein fyv7 (O14276)
Organism: Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Function: Involved in the processing of the 20S pre-rRNA.
Subcellular location: Nucleus, nucleolus {ECO:0000269|PubMed:16823372}.
Sequence: MANHSSSSSDQGTKKKGFKFRQLPEHAYQGKAKRIKQDLILKAKTKKHFYKNVRPEEYIKKGSGERKRKFSKKSHLQELYERSEEKRRIQQEKEDAKVQKRLEIEKKQKDREQTRNMLSKKTKRGQPIMRNQINHLLAKVKQTS
InterPro domains: - IPR013730: Fyv7/TAP26 (family) [14-142]
- IPR017265: rRNA-processing protein Fyv7, fungi (family) [6-144]
Interaction partners: - Nucleolar protein 16
- Ribosomal RNA-processing protein 1 homolog
- Splicing factor YJU2
- 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase 1
- Potassium transport protein 2
- Uncharacterized hydrolase C215.10
- rRNA biogenesis protein rrp36
- DNA-directed RNA polymerase I subunit rpa14
Gene Ontology annotations:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0005515 (protein binding)
Biological Process (BP): GO:0008150 (biological process), GO:0008152 (metabolic process), GO:0009987 (cellular process), GO:0071840 (cellular component organization or biogenesis), GO:0044238 (primary metabolic process), GO:0044237 (cellular metabolic process), GO:0071704 (organic substance metabolic process), GO:0006807 (nitrogen compound metabolic process), GO:0006725 (cellular aromatic compound metabolic process), GO:0034641 (cellular nitrogen compound metabolic process), GO:1901360 (organic cyclic compound metabolic process), GO:0044085 (cellular component biogenesis), GO:0006139 (nucleobase-containing compound metabolic process), GO:0043170 (macromolecule metabolic process), GO:0046483 (heterocycle metabolic process), GO:0090304 (nucleic acid metabolic process), GO:0010467 (gene expression), GO:0022613 (ribonucleoprotein complex biogenesis), GO:0042254 (ribosome biogenesis), GO:0042274 (ribosomal small subunit biogenesis), GO:0016070 (RNA metabolic process), GO:0006396 (RNA processing), GO:0034470 (ncRNA processing), GO:0030490 (maturation of SSU-rRNA), GO:0006364 (rRNA processing), GO:0034660 (ncRNA metabolic process), GO:0016072 (rRNA metabolic process), GO:0000462 (maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA))
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0031974 (membrane-enclosed lumen), GO:0043229 (intracellular organelle), GO:0043233 (organelle lumen), GO:0043227 (membrane-bounded organelle), GO:0043228 (non-membrane-bounded organelle), GO:0070013 (intracellular organelle lumen), GO:0043232 (intracellular non-membrane-bounded organelle), GO:0043231 (intracellular membrane-bounded organelle), GO:0031981 (nuclear lumen), GO:0005730 (nucleolus), GO:0005634 (nucleus)
Protein: Calcium-binding EF hand family protein (Q9FNN0)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Not known
Sequence: MSKASVILYITVGILVLFLVSYSPKKKGDHDHHHGGHNQHHRLKLRSSFNFKPTRHDPVPFDPLVADMERRREDKEWERQYIEHSHPELVSHSQKETTGGGHEHAPGHESQPEWEEFMDAEDYLNDEEKFNVTDRLILLFPKIDVSPADGFMTESELTEWTMQSSAKEVVHRTQRDLDVHDRNKDGFISFSEYEPPSWVRKSDNNSFGYDMGWWKEEHFNASDANGDGLLNLTEFNDFLHPADTKNPKLLLWLCKEEVRERDSDKDGKISFEEFFHGLFDTVRNYEEDNHNSTHPYHDLPEGPAKQLFSQLDKNDDGYLSDVELLPIISKIHPTEHYYAKQQADYIISQADSDKDRRLTLAEMIEHPYVFYSAIFDEDDTDDDYGFHDEFR
InterPro domains: - IPR011992: EF-hand domain pair (homologous_superfamily) [134-370]
- IPR018247: EF-Hand 1, calcium-binding site (binding_site) [181-363]
- IPR002048: EF-hand domain (domain) [172-365]
Interaction partners: - Uncharacterized protein F7J8_130
- Leucine-rich repeat protein kinase family protein
- RING-type E3 ubiquitin transferase
- Mitochondrial carrier protein CoAc2
- SNF1-related protein kinase regulatory subunit beta-3
- Glycoside hydrolase family 28 protein/polygalacturonase family protein
- At5g51840
- At2g23910
- Cation/H
- Cellulose synthase-like protein B1
Gene Ontology annotations:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0043167 (ion binding), GO:0043169 (cation binding), GO:0046872 (metal ion binding), GO:0005509 (calcium ion binding)
Biological Process (BP): GO:0008150 (biological process), GO:0050896 (response to stimulus), GO:0006950 (response to stress), GO:0009611 (response to wounding)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0005737 (cytoplasm), GO:0012505 (endomembrane system), GO:0005794 (Golgi apparatus), GO:0043229 (intracellular organelle), GO:0043227 (membrane-bounded organelle), GO:0043231 (intracellular membrane-bounded organelle)