Protein: RNP domain-containing protein (J9VJ75)
Organism: Cryptococcus neoformans var. grubii serotype A (strain H99 / ATCC 208821 / CBS 10515 / FGSC 9487) (Filobasidiella neoformans var. grubii)
Function: Not known
Sequence: MEDDREMRGDEPMAPEAGDRYRRDDRDRSRSRERHSSRRDEDRYRSRRRSYSRSRSRSRTRSPHRHRHRSPSRSRSRSRDRRDRDRSRSRDRGERRSYREDRHGGDHRGSGRPRSPRRGSGRYGAPRQDWEKSVGGPMNAPASEAEAHAKVSKRENRLYVGNLAYDCNYKDLANFMERGGGKVVFSEVLTTPAGQSKGCGIVEFASQEEAQRAKAELSDKPFFGRSVFIREDREETARFGAPPIPGKIGIALGEARHFLGNQQPHGFHGHGPAIPNRNLFVGNLPLQASWQDLKDLMRQAGEVIRADIGFRPDGTPKGNGTVVFLNADDAKAAIEMFNGFDWFGNVLEVREDRFAHGGAFRGRGGFRGAFFPRGGFGFRGGFRGGFRGGFMGGGMGMGHMGMNAVAGGVGAGGAAAAAGGRNFSNDLYADYNGPEGGEGMAVDQVAPSGLEPIPAEPNQQILVRNLPWSTSNEDLVELFETIGTVTLAEILYSGGQSKGEGIVQFAETADAANASEKFMGWPYGGRALDVQFNPRWHEFSASAIKVPQA
InterPro domains: - IPR035979: RNA-binding domain superfamily (homologous_superfamily) [78-534]
- IPR012677: Nucleotide-binding alpha-beta plait domain superfamily (homologous_superfamily) [150-533]
- IPR050374: RRT5/SRSF/Splicing Factor SR (family) [146-310]
- IPR000504: RNA recognition motif domain (domain) [156-535]
Gene Ontology annotations:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0097159 (organic cyclic compound binding), GO:1901363 (heterocyclic compound binding), GO:0003676 (nucleic acid binding), GO:0003723 (RNA binding), GO:0003729 (mRNA binding)
Biological Process (BP): GO:0008150 (biological process), GO:0008152 (metabolic process), GO:0009987 (cellular process), GO:0044237 (cellular metabolic process), GO:0006807 (nitrogen compound metabolic process), GO:0071840 (cellular component organization or biogenesis), GO:0071704 (organic substance metabolic process), GO:0044238 (primary metabolic process), GO:1901360 (organic cyclic compound metabolic process), GO:0044085 (cellular component biogenesis), GO:0006139 (nucleobase-containing compound metabolic process), GO:0046483 (heterocycle metabolic process), GO:0016043 (cellular component organization), GO:0006725 (cellular aromatic compound metabolic process), GO:0034641 (cellular nitrogen compound metabolic process), GO:0043170 (macromolecule metabolic process), GO:0090304 (nucleic acid metabolic process), GO:0022613 (ribonucleoprotein complex biogenesis), GO:0043933 (protein-containing complex organization), GO:0010467 (gene expression), GO:0022607 (cellular component assembly), GO:0016070 (RNA metabolic process), GO:0022618 (ribonucleoprotein complex assembly), GO:0065003 (protein-containing complex assembly), GO:0006396 (RNA processing), GO:0071826 (ribonucleoprotein complex subunit organization), GO:0008380 (RNA splicing), GO:0000245 (spliceosomal complex assembly), GO:0006397 (mRNA processing), GO:0016071 (mRNA metabolic process), GO:0006376 (mRNA splice site selection), GO:0000398 (mRNA splicing, via spliceosome), GO:0000375 (RNA splicing, via transesterification reactions), GO:0000377 (RNA splicing, via transesterification reactions with bulged adenosine as nucleophile)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0043229 (intracellular organelle), GO:0043227 (membrane-bounded organelle), GO:0043231 (intracellular membrane-bounded organelle), GO:0005634 (nucleus)