wanglab/bioreason-pro-rl-reasoning-data huggingface dataset:
Protein: Tgtp protein (Q8K242)
Organism: Mus musculus (Mouse)
Function: Not known
Sequence: MAWASSFDAFFKNFKRESKIISEYDITLIMTYIEENKLQKAVSVIEKVLRDIEDAPLNIAVTGETGTGKSTFINALRGVGHEEKDAAPTGAIETTMKRTPYPHPKLPNVTIWDLPGIGSTTFTPQNYLTEMKFGEYDFFIIISATRFKENDAQLAKAIAQMGMNFYLVRTKIDSDLDNEQKFKPKSFNKEKLLKKIKDYCSNHLQESLYSEPLVFLVSNVDISKYDFPKLETKLLQDLPAHKRHVFSLSLQSLTEATINCKRDSLKQKVFLEAVKAGVLATIPLGGMISDILENLDETFNLYRSYFGLDDASLENVAKDLNMSVDDFKVHLRFPHLFSEHNDESLEDKLFKYIKHISSVTGGPVAAVTYYRMAYYLQNLFLDTAANDAIALLNSKALFEKKVGPYISEPPEYWEA
InterPro domains: - IPR030385: IRG-type guanine nucleotide-binding (G) domain (domain) [55-237]
- IPR051515: Immunity-related GTPase (family) [7-399]
- IPR007743: Immunity-related GTPases-like (family) [22-394]
- IPR027417: P-loop containing nucleoside triphosphate hydrolase (homologous_superfamily) [33-261]
Gene Ontology annotations:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0003824 (catalytic activity), GO:0097367 (carbohydrate derivative binding), GO:0036094 (small molecule binding), GO:1901363 (heterocyclic compound binding), GO:0016787 (hydrolase activity), GO:0043167 (ion binding), GO:0097159 (organic cyclic compound binding), GO:0005515 (protein binding), GO:0016817 (hydrolase activity, acting on acid anhydrides), GO:1901265 (nucleoside phosphate binding), GO:0043168 (anion binding), GO:0000166 (nucleotide binding), GO:0032553 (ribonucleotide binding), GO:0035639 (purine ribonucleoside triphosphate binding), GO:0019003 (GDP binding), GO:0032555 (purine ribonucleotide binding), GO:0016818 (hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides), GO:0017076 (purine nucleotide binding), GO:0016462 (pyrophosphatase activity), GO:0005525 (GTP binding), GO:0019001 (guanyl nucleotide binding), GO:0032561 (guanyl ribonucleotide binding), GO:0017111 (ribonucleoside triphosphate phosphatase activity), GO:0003924 (GTPase activity)
Biological Process (BP): GO:0008150 (biological process), GO:0050896 (response to stimulus), GO:0044419 (biological process involved in interspecies interaction between organisms), GO:0009605 (response to external stimulus), GO:0009607 (response to biotic stimulus), GO:0051707 (response to other organism), GO:0009617 (response to bacterium), GO:0043207 (response to external biotic stimulus)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0005737 (cytoplasm), GO:0012505 (endomembrane system), GO:0043229 (intracellular organelle), GO:0005783 (endoplasmic reticulum), GO:0043227 (membrane-bounded organelle), GO:0043231 (intracellular membrane-bounded organelle)
Protein: Actin-related protein 2/3 complex subunit 1 (Arp2/3 complex 41 kDa subunit) (p41-ARC) (P78774)
Organism: Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Function: Functions as component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks.
Subcellular location: Cytoplasm, cytoskeleton, actin patch.
Sequence: MATSQVLHILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWANESAIVAAGYNYSPILLQGNESGWAHTRDLDAGTSKTSFTHTGNTGEGREEEGPVSFTALRSTFRNMDLKGSSQSISSLPTVHQNMIATLRPYAGTPGNITAFTSSGTDGRVVLWTL
InterPro domains: - IPR015943: WD40/YVTN repeat-like-containing domain superfamily (homologous_superfamily) [1-377]
- IPR036322: WD40-repeat-containing domain superfamily (homologous_superfamily) [18-376]
- IPR001680: WD40 repeat (repeat) [44-233]
- IPR017383: Actin-related protein 2/3 complex subunit 1 (family) [1-377]
Interaction partners: - Actin-related protein 2/3 complex subunit 2
- Actin-related protein 2/3 complex subunit 3
- Actin-related protein 2/3 complex subunit 5
- Actin-related protein 3
- Actin-related protein 2/3 complex subunit 4
- Actin-related protein 2
- Actin
- Actin-binding protein wsp1
- Structure-specific endonuclease subunit slx4
- Protein dip1
Gene Ontology annotations:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0044877 (protein-containing complex binding), GO:0005515 (protein binding), GO:0051015 (actin filament binding), GO:0008092 (cytoskeletal protein binding), GO:0003779 (actin binding)
Biological Process (BP): GO:0008150 (biological process), GO:0009987 (cellular process), GO:0051179 (localization), GO:0051234 (establishment of localization), GO:0071840 (cellular component organization or biogenesis), GO:0030029 (actin filament-based process), GO:0016043 (cellular component organization), GO:0030036 (actin cytoskeleton organization), GO:0006810 (transport), GO:0016192 (vesicle-mediated transport), GO:0006996 (organelle organization), GO:0097435 (supramolecular fiber organization), GO:0007015 (actin filament organization), GO:0007010 (cytoskeleton organization), GO:0006897 (endocytosis), GO:0045010 (actin nucleation), GO:0034314 (Arp2/3 complex-mediated actin nucleation)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0032991 (protein-containing complex), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0005885 (Arp2/3 protein complex), GO:0043229 (intracellular organelle), GO:0043228 (non-membrane-bounded organelle), GO:0043232 (intracellular non-membrane-bounded organelle), GO:0005856 (cytoskeleton), GO:0015629 (actin cytoskeleton)
Protein: Putative U-box domain-containing protein 46 (EC 2.3.2.27) (Plant U-box protein 46) (RING-type E3 ubiquitin transferase PUB46) (Q3E9F7)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Functions as an E3 ubiquitin ligase.
Sequence: MADSTETNADTLRRELQKVLTEILNDGGGNDRDETEAFSGVVKAIDEAVRILTCLRKVESKIPESDISPVEVPKEFICTLSNTIMIEPVIIASGQTYEKRYITEWLKHERTCPKTKQVLSHRLWIPNHLISDLITQWCLVNKYDHQKPSDELVAELFTSDIEALLQRVSSSSSVADQIEAAKELRHQTKKFPNVRVFFVAGIHDSITRLLSPLSTLDEAVDSSLELQENIVTALFNLSILESNKTVIAENCLVIPLLTKSLKQGTDETRRNAAATLSSLSAIDSNKIIIGNSEAVKALIDLIEEGDLLATKEATSTVFNLCIVLENKGKVVSAGLIHAATKKIKAGSNVDELLSLLALISTHNRAVEEMDKLGFIYDLFSILRKPSSLLTGENAVVIVFNMYDRNRDRSRLKVVGEEENQHGTFTKLAKQGSVRAARKAQGILQWIKRFVTGKEPQRA
InterPro domains: - IPR016024: Armadillo-type fold (homologous_superfamily) [153-446]
- IPR003613: U-box domain (domain) [71-144]
- IPR045210: PUB protein, U-box domain, plant (domain) [73-122]
- IPR013083: Zinc finger, RING/FYVE/PHD-type (homologous_superfamily) [56-151]
- IPR011989: Armadillo-like helical (homologous_superfamily) [152-454]
Interaction partners: - Putative U-box domain-containing protein 42
- Ferrochelatase-2, chloroplastic
Gene Ontology annotations:
Molecular Function (MF): GO:0003674 (molecular function), GO:0003824 (catalytic activity), GO:0016740 (transferase activity), GO:0140096 (catalytic activity, acting on a protein), GO:0019787 (ubiquitin-like protein transferase activity), GO:0004842 (ubiquitin-protein transferase activity)
Biological Process (BP): GO:0008150 (biological process), GO:0050789 (regulation of biological process), GO:0065007 (biological regulation), GO:0048583 (regulation of response to stimulus), GO:0050794 (regulation of cellular process), GO:0080135 (regulation of cellular response to stress), GO:0080134 (regulation of response to stress), GO:1900034 (regulation of cellular response to heat)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0071944 (cell periphery), GO:0016020 (membrane), GO:0043229 (intracellular organelle), GO:0043227 (membrane-bounded organelle), GO:0005886 (plasma membrane), GO:0043231 (intracellular membrane-bounded organelle), GO:0005634 (nucleus)
Protein: Uncharacterized transporter YdhK (P76186)
Organism: Escherichia coli (strain K12)
Function: Not known
Subcellular location: Cell membrane {ECO:0000305}; Multi-pass membrane protein {ECO:0000305}.
Sequence: MNASSWSLRNLPWFRATLAQWRYALRNTIAMCLALTVAYYLNLDEPYWAMTSAAVVSFPTVGGVISKSLGRIAGSLLGAIAALLLAGHTLNEPWFFLLSMSAWLGFCTWACAHFTNNVAYAFQLAGYTAAIIAFPMVNITEASQLWDIAQARVCEVIVGILCGGMMMMILPSSSDATALLTALKNMHARLLEHASLLWQPETTDAIRAAHEGVIGQILTMNLLRIQAFWSHYRFRQQNARLNALLHQQLRMTSVISSLRRMLLNWPSPPGATREILEQLLTALASSQTDVYTVARIIAPLRPTNVADYRHVAFWQRLRYFCRLYLQSSQELHRLQSGVDDHTRLPRTSGLARHTDNAEAMWSGLRTFCTLMMIGAWSIASQWDAGANALTLAAISCVLYSAVAAPFKSLSLLMRTLVLLSLFSFVVKFGLMVQISDLWQFLLFLFPLLATMQLLKLQMPKFAALWGQLIVFMGSFIAVTNPPVYDFADFLNDNLAKIVGVALAWLAFAILRPGSDARKSRRHIRALRRDFVDQLSRHPTLSESEFESLTYHHVSQLSNSQDALARRWLLRWGVVLLNCSHVVWQLRDWESRSDPLSRVRDNCISLLRGVMSERGVQQKSLAATLEELQRICDSLARHHQPAARELAAIVWRLYCSLSQLEQAPPQGTLAS
InterPro domains: - IPR006726: Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein (family) [20-661]
Interaction partners: - Uncharacterized protein YdhJ
- Uncharacterized protein YdhI
- Uncharacterized protein YfeS
- Uncharacterized protein YfeK
Gene Ontology annotations:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005215 (transporter activity), GO:0022857 (transmembrane transporter activity), GO:0022804 (active transmembrane transporter activity), GO:0015291 (secondary active transmembrane transporter activity)
Biological Process (BP): GO:0008150 (biological process), GO:0051179 (localization), GO:0051234 (establishment of localization), GO:0006810 (transport), GO:0071702 (organic substance transport), GO:0015849 (organic acid transport), GO:0015711 (organic anion transport), GO:0046942 (carboxylic acid transport)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0071944 (cell periphery), GO:0016020 (membrane), GO:0005886 (plasma membrane)
Protein: Transmembrane protein 192 (Q8IY95)
Organism: Homo sapiens (Human)
Function: Not known
Subcellular location: Lysosome membrane {ECO:0000269|PubMed:17897319, ECO:0000269|PubMed:20370317}; Multi-pass membrane protein {ECO:0000269|PubMed:17897319}. Late endosome {ECO:0000269|PubMed:20370317}.
Sequence: MAAGGRMEDGSLDITQSIEDDPLLDAQLLPHHSLQAHFRPRFHPLPTVIIVNLLWFIHLVFVVLAFLTGVLCSYPNPNEDKCPGNYTNPLKVQTVIILGKVILWILHLLLECYIQYHHSKIRNRGYNLIYRSTRHLKRLALMIQSSGNTVLLLILCMQHSFPEPGRLYLDLILAILALELICSLICLLIYTVKIRRFNKAKPEPDILEEEKIYAYPSNITSETGFRTISSLEEIVEKQGDTIEYLKRHNALLSKRLLALTSSDLGCQPSRT
InterPro domains: - IPR029399: TMEM192 family (family) [16-266]
Interaction partners: - SPRY domain-containing protein 4
- Lysosome-associated membrane glycoprotein 2
Gene Ontology annotations:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0005515 (protein binding)
Biological Process (BP): GO:0008150 (biological process), GO:0065007 (biological regulation), GO:0050789 (regulation of biological process), GO:0048519 (negative regulation of biological process), GO:0048583 (regulation of response to stimulus), GO:0023051 (regulation of signaling), GO:0023057 (negative regulation of signaling), GO:0048523 (negative regulation of cellular process), GO:0048585 (negative regulation of response to stimulus), GO:0050794 (regulation of cellular process), GO:0009968 (negative regulation of signal transduction), GO:0010648 (negative regulation of cell communication), GO:0010646 (regulation of cell communication), GO:0009966 (regulation of signal transduction), GO:0030111 (regulation of Wnt signaling pathway), GO:0030178 (negative regulation of Wnt signaling pathway), GO:0090090 (negative regulation of canonical Wnt signaling pathway), GO:0060828 (regulation of canonical Wnt signaling pathway)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0005737 (cytoplasm), GO:0005773 (vacuole), GO:0043229 (intracellular organelle), GO:0043227 (membrane-bounded organelle), GO:0000323 (lytic vacuole), GO:0043231 (intracellular membrane-bounded organelle), GO:0005764 (lysosome)
Protein: RanBP2-type domain-containing protein (Q389A9)
Organism: Trypanosoma brucei brucei (strain 927/4 GUTat10.1)
Function: Not known
Sequence: MRRPREALTLPSSSVFQMEERLVFEREISGGISDYFANGGVCITGLSHSFYPFTAIALWAGGAPHSPDDVRLPLLLLALKTDGAFMTAHEANLFGGTSVAGCRYAQLTLRCFGASCPAVRPHRDTRCIQLVVSFLNAAWASTNDDGGKQFATISSELEEFRGPVPLHIVQLLLSVPAIPTLLECVVRRELERCSSDEGISKGLFCACVEGLLSSDNFFTSHHFDEMDAILRCIIGKIGDSFDYLSVRWTPILNKLSRIYMRQWRGEALMSLHDELLAKIPALETKLPLSYLLRCVGSLVDAGATGEADDGGDDARIWRKIVAVTTLAVRLYGSCQSNLQSVWVIFFKGAITLKPQSMVYIRVVEAYHVCASLGHPVIVDKSAFSQVVRLLVSVVGVRSLKETATAVSEFYRFLKEHPSINFLWVIDSLIPIMSEIWKAHGELGCSIVQNITANLQADYFPSRCLSGIRLGDNPMVRRLLEDFKVMERSQFWWRCGCGTQLPSCAQRCLTCLRQGNISWTCGVCGARHSGRVVETVCNCGSPHPRMREAELMDVGVCEGCGEILPPTGECGKCGEIDREKQATRECPSCGCLYSKQALCCPTCYAANEAKSSLLWHCDACGEFNHSAWSKCQHCPGKRKVGCIVTPLQPWVCGCGGRNHPCRTSCESCSLLHRGAYTCACCSIVSTCQKAIEVPLHNSKLRLIVCERCGNVHPRDCNVLCSPFLPRHCHRCGVGYTRESMLSEECCNVCHTRLCYDELRPFCCSHCGQKPAQIGFQCTSCRAPREDVAAADVYVWRCLRETTPATAVTGTHVCGQWNYSWSDHCISCREARARSQYECRARFLPWVCASCGSDNLPTDVLLCPNCENGLQMAPECSVCGLPHLSLDCTVKEDI
InterPro domains: - IPR001876: Zinc finger, RanBP2-type (domain) [614-633]
Gene Ontology annotations:
Molecular Function (MF): GO:0003674 (molecular function), GO:0003824 (catalytic activity), GO:0016740 (transferase activity), GO:0140096 (catalytic activity, acting on a protein), GO:0019787 (ubiquitin-like protein transferase activity), GO:0004842 (ubiquitin-protein transferase activity)
Biological Process (BP): GO:0008150 (biological process), GO:0008152 (metabolic process), GO:0009987 (cellular process), GO:0044237 (cellular metabolic process), GO:0071704 (organic substance metabolic process), GO:0044238 (primary metabolic process), GO:0006807 (nitrogen compound metabolic process), GO:0006725 (cellular aromatic compound metabolic process), GO:1901360 (organic cyclic compound metabolic process), GO:0034641 (cellular nitrogen compound metabolic process), GO:0006139 (nucleobase-containing compound metabolic process), GO:0043170 (macromolecule metabolic process), GO:0046483 (heterocycle metabolic process), GO:0090304 (nucleic acid metabolic process), GO:0010467 (gene expression), GO:0016070 (RNA metabolic process), GO:0006396 (RNA processing), GO:0034470 (ncRNA processing), GO:0034660 (ncRNA metabolic process), GO:0006399 (tRNA metabolic process), GO:0008033 (tRNA processing)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005737 (cytoplasm), GO:0005622 (intracellular anatomical structure)
Protein: High-affinity choline transporter 1 (Q8UWF0)
Organism: Torpedo marmorata (Marbled electric ray)
Function: Imports choline from the extracellular space to the neuron with high affinity. Rate-limiting step in acetylcholine synthesis. Sodium ion and chloride ion dependent.
Subcellular location: Membrane {ECO:0000250}; Multi-pass membrane protein {ECO:0000250}.
Sequence: MTVHIDGIVAIVLFYLLILFVGLWAAWKSKNTSMEGAMDRSEAIMIGGRDIGLLVGGFTMTATWVGGGYINGTAEAVYVPGYGLAWAQAPFGYALSLVIGGLFFAKPMRSRGYVTMLDPFQQMYGKRMGGLLFIPALLGEIFWSAAILSALGATLSVIVDININVSVVVSAVIAVLYTLVGGLYSVAYTDVVQLFCIFLGLWISIPFALLNPAVTDIIVTANQEVYQEPWVGNIQSKDSLIWIDNFLLLMLGGIPWQVYFQRVLSASSATYAQVLSFLAAFGCVLMAIPSVLIGAIGTSTDWNQTSYGLPGPIGKNETDMILPIVLQHLCPPYISFFGLGAVSAAVMSSADSSILSASSMFARNIYHLAFRQEASDKEIVWVMRITIFLFGGAATSMALLAQSIYGLWYLSSDLVYVIIFPQLISVLFVKGTNTYGSIAGYIIGFLLRISGGEPYLHMQPFIYYPGCYLDHSFGDDPVYVQRFPFKTMAMLFSFLGNTGVSYLVKYLFVSGILPPKLDFLDSVVSKHSKEIMDKTFLMNQDNITLSELVHVNPIHSASVSAALTNKEAFEDIEPNPELSKSGND
InterPro domains: - IPR052244: High-affinity choline transporter (family) [1-543]
- IPR038377: Sodium/glucose symporter superfamily (homologous_superfamily) [37-510]
- IPR001734: Sodium/solute symporter (family) [4-458]
Gene Ontology annotations:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005215 (transporter activity), GO:0022857 (transmembrane transporter activity), GO:0015101 (organic cation transmembrane transporter activity), GO:0072349 (modified amino acid transmembrane transporter activity), GO:0015651 (quaternary ammonium group transmembrane transporter activity)
Biological Process (BP): GO:0008150 (biological process), GO:0008152 (metabolic process), GO:0009987 (cellular process), GO:0065007 (biological regulation), GO:0051179 (localization), GO:0051234 (establishment of localization), GO:0065008 (regulation of biological quality), GO:0009058 (biosynthetic process), GO:0044237 (cellular metabolic process), GO:0055085 (transmembrane transport), GO:0071704 (organic substance metabolic process), GO:0006807 (nitrogen compound metabolic process), GO:0001505 (regulation of neurotransmitter levels), GO:0044249 (cellular biosynthetic process), GO:1901576 (organic substance biosynthetic process), GO:1901564 (organonitrogen compound metabolic process), GO:0042133 (neurotransmitter metabolic process), GO:1900619 (acetate ester metabolic process), GO:0006810 (transport), GO:1901566 (organonitrogen compound biosynthetic process), GO:0006836 (neurotransmitter transport), GO:1900620 (acetate ester biosynthetic process)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0071944 (cell periphery), GO:0016020 (membrane), GO:0005886 (plasma membrane)
Protein: Receptor-like protein tyrosine phosphatase kappa (A5HV09)
Organism: Rattus norvegicus (Rat)
Function: Not known
Sequence: MDVAAAALPAFVALWLLSPWPLLGSVQGQFSAGGCTFDDGPGACDYHQDLYDDFEWVHVSAQEPHYLPPEMPQ
InterPro domains: - IPR000998: MAM domain (domain) [33-73]
Gene Ontology annotations:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0005515 (protein binding)
Biological Process (BP): GO:0008150 (biological process), GO:0002376 (immune system process), GO:0009987 (cellular process), GO:0065007 (biological regulation), GO:0050896 (response to stimulus), GO:0050789 (regulation of biological process), GO:0048519 (negative regulation of biological process), GO:0032501 (multicellular organismal process), GO:0044419 (biological process involved in interspecies interaction between organisms), GO:0009605 (response to external stimulus), GO:0001775 (cell activation), GO:0006950 (response to stress), GO:0045321 (leukocyte activation), GO:0048523 (negative regulation of cellular process), GO:0051707 (response to other organism), GO:0009607 (response to biotic stimulus), GO:0050794 (regulation of cellular process), GO:0006952 (defense response), GO:0002274 (myeloid leukocyte activation), GO:0043207 (response to external biotic stimulus), GO:0060548 (negative regulation of cell death), GO:0010941 (regulation of cell death), GO:0009615 (response to virus), GO:0046649 (lymphocyte activation), GO:0098542 (defense response to other organism), GO:0042110 (T cell activation), GO:1901214 (regulation of neuron death), GO:1901215 (negative regulation of neuron death), GO:0140546 (defense response to symbiont), GO:0051607 (defense response to virus), GO:0043069 (negative regulation of programmed cell death), GO:0043067 (regulation of programmed cell death), GO:0050678 (regulation of epithelial cell proliferation), GO:0043066 (negative regulation of apoptotic process), GO:0042981 (regulation of apoptotic process), GO:0043524 (negative regulation of neuron apoptotic process), GO:0043523 (regulation of neuron apoptotic process)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0071944 (cell periphery), GO:0016020 (membrane), GO:0005886 (plasma membrane)
Protein: RING finger protein 113 homolog (Q55G16)
Organism: Dictyostelium discoideum (Social amoeba)
Function: Not known
Sequence: MEKEESTNKNNENIQSENEINKIDNKSNTENPTIKCIFKKPNKQRNIRKRSDDLILNTSNNADEEDEDGNEEKDKKKLKSKINQYTTKQDKKNEFSYDSSGNAGSSINSAELSSTQYMNEEEEFKKEVVLSSSRNNNNNNNNNNNNNNDNISNSEGSGGSDNNDDGIYRGMKSYSTFVEKKSDLTYKGGGVKAGPMKTSTTFKLSNRIDHQPDVCKDYKQTGQCTFGDACKFLHDRSDYKSGWQIDKEYEEEQKQKRLNNINGIKNNNNDNKNNDDDKEQQQFPFACFICKKQYVDPVQTKCKHFFCEDCALTHNRKNKKCALCGEPTLGTFITPPKKILDQLMEISKSHFKNQS
InterPro domains: - IPR039971: Pre-mRNA-splicing factor CWC24-like (family) [28-349]
- IPR017907: Zinc finger, RING-type, conserved site (conserved_site) [302-311]
- IPR013083: Zinc finger, RING/FYVE/PHD-type (homologous_superfamily) [240-352]
- IPR036855: Zinc finger, CCCH-type superfamily (homologous_superfamily) [207-240]
- IPR000571: Zinc finger, CCCH-type (domain) [209-237]
- IPR001841: Zinc finger, RING-type (domain) [287-324]
Interaction partners: - Cell division cycle 5-like protein
- Activating signal cointegrator 1 complex subunit 3-like
- Pre-mRNA-processing factor 19
- PSP proline-rich domain-containing protein
- Cyclophilin-type peptidylprolyl cis-trans isomerase
- Pre-mRNA-splicing factor CWC26
- Initiation factor eIF-4 gamma middle domain-containing protein
- Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
- Splicing factor 3A subunit 2
- Protein BUD31 homolog
Gene Ontology annotations:
Molecular Function (MF): GO:0003674 (molecular function), GO:0003824 (catalytic activity), GO:0016740 (transferase activity), GO:0140096 (catalytic activity, acting on a protein), GO:0019787 (ubiquitin-like protein transferase activity), GO:0004842 (ubiquitin-protein transferase activity)
Biological Process (BP): GO:0008150 (biological process), GO:0008152 (metabolic process), GO:0009987 (cellular process), GO:0044237 (cellular metabolic process), GO:0071704 (organic substance metabolic process), GO:0044238 (primary metabolic process), GO:0006807 (nitrogen compound metabolic process), GO:0006725 (cellular aromatic compound metabolic process), GO:0034641 (cellular nitrogen compound metabolic process), GO:1901360 (organic cyclic compound metabolic process), GO:0006139 (nucleobase-containing compound metabolic process), GO:0043170 (macromolecule metabolic process), GO:0046483 (heterocycle metabolic process), GO:0090304 (nucleic acid metabolic process), GO:0010467 (gene expression), GO:0016070 (RNA metabolic process), GO:0006396 (RNA processing), GO:0008380 (RNA splicing), GO:0006397 (mRNA processing), GO:0016071 (mRNA metabolic process), GO:0000398 (mRNA splicing, via spliceosome), GO:0000375 (RNA splicing, via transesterification reactions), GO:0000377 (RNA splicing, via transesterification reactions with bulged adenosine as nucleophile)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0043229 (intracellular organelle), GO:0043227 (membrane-bounded organelle), GO:0043231 (intracellular membrane-bounded organelle), GO:0005634 (nucleus)