Protein: RNA polymerase sigma-54 factor rpoN (E0SE58)
Organism: Dickeya dadantii (strain 3937) (Erwinia chrysanthemi (strain 3937))
Function: Not known
Sequence: METITLKQMDACQIHTPANTVDWEQVFRLHGKRLQNFIRKRVSNREDVEDLQQMTYLEVLKNREKFAGASRPETWVFGIALNLVRNHFKQARYRAVDISDDALEVAEILSTDIDPSRITECDHSLNRALAASAHLPEETRKMLMMLLDADVSYQDIAEQLNIPIGTVRSRLSRARGYLRQAVDA
InterPro domains: - IPR007627: RNA polymerase sigma-70 region 2 (domain) [27-92]
- IPR013249: RNA polymerase sigma factor 70, region 4 type 2 (domain) [128-175]
- IPR013324: RNA polymerase sigma factor, region 3/4-like (homologous_superfamily) [125-182]
- IPR014284: RNA polymerase sigma-70-like domain (domain) [23-181]
- IPR013325: RNA polymerase sigma factor, region 2 (homologous_superfamily) [22-107]
- IPR039425: RNA polymerase sigma-70-like (family) [22-182]
- IPR036388: Winged helix-like DNA-binding domain superfamily (homologous_superfamily) [120-183]
Interaction partners: - Anti-sigma-E factor RseA
- Type III protein secretion system sensor kinase
- DNA-binding response regulator, LuxR family, near polyamine transporter
- Transmembrane anti-sigma factor
- Type III secretion protein
Gene Ontology annotations:
Molecular Function (MF): GO:0003674 (molecular function), GO:0140110 (transcription regulator activity), GO:0003700 (DNA-binding transcription factor activity), GO:0016987 (sigma factor activity)
Biological Process (BP): GO:0008150 (biological process), GO:0008152 (metabolic process), GO:0065007 (biological regulation), GO:0050896 (response to stimulus), GO:0050789 (regulation of biological process), GO:0044419 (biological process involved in interspecies interaction between organisms), GO:0009987 (cellular process), GO:0009605 (response to external stimulus), GO:0009058 (biosynthetic process), GO:0044237 (cellular metabolic process), GO:0042221 (response to chemical), GO:0009607 (response to biotic stimulus), GO:0006807 (nitrogen compound metabolic process), GO:0048583 (regulation of response to stimulus), GO:0035821 (modulation of process of another organism), GO:0071704 (organic substance metabolic process), GO:0044403 (biological process involved in symbiotic interaction), GO:0051707 (response to other organism), GO:0048585 (negative regulation of response to stimulus), GO:0044238 (primary metabolic process), GO:0051701 (biological process involved in interaction with host), GO:1901576 (organic substance biosynthetic process), GO:1901564 (organonitrogen compound metabolic process), GO:0043207 (response to external biotic stimulus), GO:0052173 (response to defenses of other organism), GO:0080134 (regulation of response to stress), GO:0044003 (modulation by symbiont of host process), GO:0019538 (protein metabolic process), GO:0075136 (response to host), GO:0044249 (cellular biosynthetic process), GO:0034641 (cellular nitrogen compound metabolic process), GO:0043603 (amide metabolic process), GO:0043170 (macromolecule metabolic process), GO:0031348 (negative regulation of defense response), GO:1901566 (organonitrogen compound biosynthetic process), GO:0031347 (regulation of defense response), GO:0009059 (macromolecule biosynthetic process), GO:0052200 (response to host defenses), GO:0006518 (peptide metabolic process), GO:0000165 (MAPK cascade), GO:0043604 (amide biosynthetic process), GO:0044271 (cellular nitrogen compound biosynthetic process), GO:0052031 (modulation by symbiont of host defense response), GO:0010467 (gene expression), GO:0043043 (peptide biosynthetic process), GO:0052572 (response to host immune response), GO:0030682 (mitigation of host defenses by symbiont), GO:0052553 (modulation by symbiont of host immune response), GO:0052167 (modulation by symbiont of host innate immune response)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0005737 (cytoplasm), GO:0043229 (intracellular organelle), GO:0043227 (membrane-bounded organelle), GO:0043231 (intracellular membrane-bounded organelle), GO:0005634 (nucleus)