Protein: Nucleolar and coiled-body phosphoprotein 1 (B8JIY2)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Function: Not known
Sequence: MAEDSTVPSDLYQHVYSFLVENKFAKAAKEFLRQAKVKPQDQNEDSLMDIFNFWVKSPETKKRKAVTSGPAAVNGPSAKKAKKDADSSSSEDSSSEEEQAAPAKKAVQVKAPPPKKPAAVATKESSSEDSSDSEDEAPAKTTAKKPAAVKAAVQPAAAARKKDTSSSSEESDSEEEPSKTPAKVVKPVTGTPKTVSTPVSAAQKKQDSSSEDSSSDSEDEPPAKSAVKAAVPVKTPPPAKPAAPAVSSSDDSSSDEEDAPPSKKPKTGQFSAVPPPGTLTAQAPVKTPAASVKTVTPKAAAKNDSSSSDSSDSSSEDEAKKPAVKAAPAKAAPAKKAPTKVAPAQKKDSSSSDSSSSEDEATKPAIKVTPAKAASAKSTPAKAAQAKAAPAKVTPAAEESSSSSSEESEEESKKPAAKVAPGKAAAKRAPPKKTPAKVTPAAKESSPSSSDSEEDEPPTPAKATPAKAAPAKATPAKATPAKAAPAKKDDSSSSDSESSEDEAPAKPAATSKPVSTPKPGAKPAESSSASDSSSDEDEGPQKKPVTTPVSKPAPAKPPAAKTTNKPAESSSSSSDSSSDEEPKKKPATTPVSKPTPAKPTPTVKTTNKQAESSSDSSSDEEDKPQKKAATTPASKPVATSAKTTPAAKPAESSSDSDSSSDEEAQKKTTTPVPSKPATPAKPAAKAAESSSDSSDSEDETPAAKTAKPAAATATKSPAAASKPPVSASKPAAESSSSDSDSSSEDEKQAKTTVTPKAAPKPAVTPVNAKKAESSSSESSDSSDSETEAKKTPAKPVVANGKPVTKTPTSAAKTPAKKTAESSSSSDSSSDEEEPSKTPATKTPPATKTPPATKTPPATKTPPATKKQAAEAKAESSSSEESSEEEETPAATNGTQSAKKATPKNKKIATSTPQTFPRTKQKDSNAPFRRIREEDVEVDPRLKDNSFDAKMGANGDWGQKANNVLKFTKGKSFRHEKTKKKRGSYRGGAISTTVNSIKFDSD
InterPro domains: - IPR007718: Srp40, C-terminal (domain) [926-998]
- IPR039191: Nopp140-like (family) [3-756]
- IPR006594: LIS1 homology motif (conserved_site) [7-39]
Interaction partners: - Nucleolar protein 56
- Nucleolar protein 58
- H/ACA ribonucleoprotein complex subunit DKC1
- rRNA 2'-O-methyltransferase fibrillarin
- DNA-directed RNA polymerase subunit
- DNA-directed RNA polymerase I subunit RPA2
- Ribosomal L1 domain-containing protein 1
- RNA polymerase I and III subunit C.
- Ribosome biogenesis protein BRX1 homolog
- Kelch repeat and BTB domain-containing protein 8
Gene Ontology annotations:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0097159 (organic cyclic compound binding), GO:1901363 (heterocyclic compound binding), GO:0005515 (protein binding), GO:0003676 (nucleic acid binding), GO:0003677 (DNA binding), GO:0003723 (RNA binding), GO:0003690 (double-stranded DNA binding), GO:0043565 (sequence-specific DNA binding), GO:1990837 (sequence-specific double-stranded DNA binding), GO:0000182 (rDNA binding)
Biological Process (BP): GO:0008150 (biological process), GO:0008152 (metabolic process), GO:0050789 (regulation of biological process), GO:0032501 (multicellular organismal process), GO:0065007 (biological regulation), GO:0032502 (developmental process), GO:0009987 (cellular process), GO:0048856 (anatomical structure development), GO:0007275 (multicellular organism development), GO:0009058 (biosynthetic process), GO:0009653 (anatomical structure morphogenesis), GO:0019222 (regulation of metabolic process), GO:0006807 (nitrogen compound metabolic process), GO:0071704 (organic substance metabolic process), GO:0048646 (anatomical structure formation involved in morphogenesis), GO:0044237 (cellular metabolic process), GO:0050794 (regulation of cellular process), GO:0044238 (primary metabolic process), GO:0048729 (tissue morphogenesis), GO:1901576 (organic substance biosynthetic process), GO:0035148 (tube formation), GO:0046483 (heterocycle metabolic process), GO:0048731 (system development), GO:0048513 (animal organ development), GO:0060255 (regulation of macromolecule metabolic process), GO:0044249 (cellular biosynthetic process), GO:0006725 (cellular aromatic compound metabolic process), GO:0034641 (cellular nitrogen compound metabolic process), GO:0043170 (macromolecule metabolic process), GO:0035295 (tube development), GO:0009887 (animal organ morphogenesis), GO:1901360 (organic cyclic compound metabolic process), GO:0048598 (embryonic morphogenesis), GO:0006139 (nucleobase-containing compound metabolic process), GO:0009888 (tissue development), GO:0060322 (head development), GO:0009790 (embryo development), GO:0035239 (tube morphogenesis), GO:0009059 (macromolecule biosynthetic process), GO:1901362 (organic cyclic compound biosynthetic process), GO:0060562 (epithelial tube morphogenesis), GO:0021915 (neural tube development), GO:0019438 (aromatic compound biosynthetic process), GO:0003143 (embryonic heart tube morphogenesis), GO:0002009 (morphogenesis of an epithelium), GO:0016331 (morphogenesis of embryonic epithelium), GO:0010468 (regulation of gene expression), GO:0072175 (epithelial tube formation), GO:0007420 (brain development), GO:0048568 (embryonic organ development), GO:0007399 (nervous system development), GO:0003007 (heart morphogenesis), GO:0001501 (skeletal system development), GO:0090304 (nucleic acid metabolic process), GO:0035050 (embryonic heart tube development), GO:0072359 (circulatory system development), GO:0007417 (central nervous system development), GO:0044271 (cellular nitrogen compound biosynthetic process), GO:0060429 (epithelium development), GO:0010467 (gene expression), GO:0007507 (heart development), GO:0009792 (embryo development ending in birth or egg hatching), GO:0001838 (embryonic epithelial tube formation), GO:0043009 (chordate embryonic development), GO:0016070 (RNA metabolic process), GO:0006396 (RNA processing), GO:0001843 (neural tube closure), GO:0001947 (heart looping), GO:0001841 (neural tube formation), GO:0032774 (RNA biosynthetic process), GO:0097659 (nucleic acid-templated transcription), GO:0034470 (ncRNA processing), GO:0006364 (rRNA processing), GO:0034660 (ncRNA metabolic process), GO:0098781 (ncRNA transcription), GO:0016072 (rRNA metabolic process), GO:0009303 (rRNA transcription)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0031974 (membrane-enclosed lumen), GO:0043229 (intracellular organelle), GO:0043233 (organelle lumen), GO:0043227 (membrane-bounded organelle), GO:0043228 (non-membrane-bounded organelle), GO:0070013 (intracellular organelle lumen), GO:0043232 (intracellular non-membrane-bounded organelle), GO:0043231 (intracellular membrane-bounded organelle), GO:0031981 (nuclear lumen), GO:0005730 (nucleolus), GO:0005634 (nucleus)