Protein: Protein FAR1-RELATED SEQUENCE 1 (Q5UBY2)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Putative transcription activator involved in regulating light control of development.
Subcellular location: Nucleus {ECO:0000269|PubMed:15591448}. Note=The nuclear localization is independent of the light treatment.
Sequence: MSSGECSNVQLDDHRKNNLEIDEGREFESKEEAFEFYKEYANSVGFTTIIKASRRSRMTGKFIDAKFVCTRYGSKKEDIDTGLGTDGFNIPQARKRGRINRSSSKTDCKAFLHVKRRQDGRWVVRSLVKEHNHEIFTGQADSLRELSGRRKLEKLNGAIVKEVKSRKLEDGDVERLLNFFTDMQVENPFFFYSIDLSEEQSLRNIFWVDAKAMHGCRPRVILTKHDQMLKEAVLEVFPSSRHCFYMWDTLGQMPEKLGHVIRLEKKLVDEINDAIYGSCQSEDFEKNWWEVVDRFHMRDNVWLQSLYEDREYWVPVYMKDVSLAGMCTAQRSDSVNSGLDKYIQRKTTFKAFLEQYKKMIQERYEEEEKSEIETLYKQPGLKSPSPFGKQMAEVYTREMFKKFQVEVLGGVACHPKKESEEDGVNKRTFRVQDYEQNRSFVVVWNSESSEVVCSCRLFELKGFLCRHAMIVLQMSGELSIPSQYVLKRWTKDAKSREVMESDQTDVESTKAQRYKDLCLRSLKLSEEASLSEESYNAVVNVLNEALRKWENKSNLIQNLEESESVTAQDLPIHEEQNNTYDMNKDDNVADTGQEYSLQEVWKVTALQEQRNRYSILDDYLSAQHMSHEMGQINSMASNRNGYCSVHQNIHSLQGQSITHPRLYETEQSSFRPEAMYERLQDMVKDLN
InterPro domains: - IPR004330: FAR1 DNA binding domain (domain) [35-136]
- IPR007527: Zinc finger, SWIM-type (domain) [440-476]
- IPR031052: FHY3/FAR1 family (family) [211-557]
- IPR006564: Zinc finger, PMZ-type (domain) [451-478]
Interaction partners: - Histone acetyltransferase subunit NuA4-domain protein
- Non-specific lipid transfer protein GPI-anchored 23
Gene Ontology annotations:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0140110 (transcription regulator activity), GO:0003700 (DNA-binding transcription factor activity), GO:0005515 (protein binding), GO:0001216 (DNA-binding transcription activator activity), GO:0000981 (DNA-binding transcription factor activity, RNA polymerase II-specific), GO:0001228 (DNA-binding transcription activator activity, RNA polymerase II-specific)
Biological Process (BP): GO:0008150 (biological process), GO:0048518 (positive regulation of biological process), GO:0050789 (regulation of biological process), GO:0023052 (signaling), GO:0065007 (biological regulation), GO:0050896 (response to stimulus), GO:0009987 (cellular process), GO:0048519 (negative regulation of biological process), GO:0009628 (response to abiotic stimulus), GO:0042752 (regulation of circadian rhythm), GO:0019222 (regulation of metabolic process), GO:0050793 (regulation of developmental process), GO:0050794 (regulation of cellular process), GO:0009893 (positive regulation of metabolic process), GO:0051716 (cellular response to stimulus), GO:0051093 (negative regulation of developmental process), GO:0042753 (positive regulation of circadian rhythm), GO:0007154 (cell communication), GO:0007165 (signal transduction), GO:0048522 (positive regulation of cellular process), GO:1900055 (regulation of leaf senescence), GO:0010604 (positive regulation of macromolecule metabolic process), GO:0009314 (response to radiation), GO:0060255 (regulation of macromolecule metabolic process), GO:0009891 (positive regulation of biosynthetic process), GO:0104004 (cellular response to environmental stimulus), GO:0031325 (positive regulation of cellular metabolic process), GO:0071214 (cellular response to abiotic stimulus), GO:0009889 (regulation of biosynthetic process), GO:0051171 (regulation of nitrogen compound metabolic process), GO:0051173 (positive regulation of nitrogen compound metabolic process), GO:0031323 (regulation of cellular metabolic process), GO:0010017 (red or far-red light signaling pathway), GO:0080090 (regulation of primary metabolic process), GO:0071478 (cellular response to radiation), GO:0009416 (response to light stimulus), GO:0010556 (regulation of macromolecule biosynthetic process), GO:0010468 (regulation of gene expression), GO:0010557 (positive regulation of macromolecule biosynthetic process), GO:0045935 (positive regulation of nucleobase-containing compound metabolic process), GO:0051254 (positive regulation of RNA metabolic process), GO:0031326 (regulation of cellular biosynthetic process), GO:0019219 (regulation of nucleobase-containing compound metabolic process), GO:0051252 (regulation of RNA metabolic process), GO:0031328 (positive regulation of cellular biosynthetic process), GO:2001141 (regulation of RNA biosynthetic process), GO:0006355 (regulation of DNA-templated transcription), GO:0071482 (cellular response to light stimulus), GO:0009639 (response to red or far red light), GO:1902680 (positive regulation of RNA biosynthetic process), GO:0045893 (positive regulation of DNA-templated transcription), GO:0010218 (response to far red light), GO:0071489 (cellular response to red or far red light), GO:1903508 (positive regulation of nucleic acid-templated transcription), GO:1903506 (regulation of nucleic acid-templated transcription)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0043229 (intracellular organelle), GO:0043227 (membrane-bounded organelle), GO:0043231 (intracellular membrane-bounded organelle), GO:0005634 (nucleus)