wanglab/bioreason-pro-rl-reasoning-data huggingface dataset:
Protein: Cytochrome P450 (Q86SK2)
Organism: Homo sapiens (Human)
Function: Not known
Subcellular location: Endoplasmic reticulum membrane {ECO:0000256|ARBA:ARBA00004586}.
Sequence: MDLIPNFAMETWVLVATSLVLLYIVFGAYSMDVITSTSFGVNIDSLNNPQDPFVENTKKLLRFDFLDPFFLSITVFPFLIPILEVLNICVFPREVTNFLRKSVKRMKESRLEDTQKHRVDFLQLMIDSQNSKETESHKALSDLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPPTYDTVLQMEYLDMVVNETLRLFPIAMRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNKDNIDPYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNFSFKPCKETQIPLKLSLGGLLQPEKPVVLKVESRDGTVSGA
InterPro domains: - IPR036396: Cytochrome P450 superfamily (homologous_superfamily) [13-351]
- IPR017972: Cytochrome P450, conserved site (conserved_site) [285-294]
- IPR001128: Cytochrome P450 (family) [26-343]
- IPR002401: Cytochrome P450, E-class, group I (family) [144-315]
- IPR050705: Cytochrome P450 3A (family) [25-347]
Gene Ontology annotations:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0003824 (catalytic activity), GO:0036094 (small molecule binding), GO:0008289 (lipid binding), GO:0097159 (organic cyclic compound binding), GO:0043167 (ion binding), GO:0016491 (oxidoreductase activity), GO:0005496 (steroid binding), GO:0004497 (monooxygenase activity), GO:0043177 (organic acid binding), GO:0016705 (oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen), GO:0043168 (anion binding), GO:0005501 (retinoid binding), GO:0016709 (oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen), GO:0031406 (carboxylic acid binding), GO:0001972 (retinoic acid binding), GO:0033293 (monocarboxylic acid binding)
Biological Process (BP): GO:0008150 (biological process), GO:0008152 (metabolic process), GO:0050896 (response to stimulus), GO:0009987 (cellular process), GO:0051716 (cellular response to stimulus), GO:0044237 (cellular metabolic process), GO:0042221 (response to chemical), GO:0009410 (response to xenobiotic stimulus), GO:0070887 (cellular response to chemical stimulus), GO:0006805 (xenobiotic metabolic process), GO:0071466 (cellular response to xenobiotic stimulus)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0005737 (cytoplasm), GO:0012505 (endomembrane system), GO:0043229 (intracellular organelle), GO:0005783 (endoplasmic reticulum), GO:0043227 (membrane-bounded organelle), GO:0043231 (intracellular membrane-bounded organelle)
Protein: Os09g0410700 protein (Q6ESL3)
Organism: Oryza sativa subsp. japonica (Rice)
Function: Not known
Sequence: MWEGGSHDAAAQLLPWFVGEPAAAAVGGYGGCVDVVGQGGVFGFGFEAAAAPVVTRQQRGGAAAAEGSSRGGGGKPAVVSGLLGSLQAELGRVTAREIMDAKALAASRSHSEAERRRRQRINGHLARLRSLLPNTTKTDKASLLAEVIEHVKELKRQTTAIAAAAAAGDYHGNDEDDDDAVVGRRSAAAQQLLPTEADELAVDAAVDAEGKLVVRASLCCEDRPDLIPDIARALAALRLRARRAEITTLGGRVRSVLLITADEQQQQHCDDVDDDEDGHRLLLRHGIDGAGAAADDDDECAASHRRHECIATVQEALRGVMDRRAAASSGDTSSSGGAVVAGGGGGSIKRQRMNYGVHEQCSV
InterPro domains: - IPR011598: Myc-type, basic helix-loop-helix (bHLH) domain (domain) [105-160]
- IPR045865: ACT-like domain (homologous_superfamily) [217-264]
- IPR036638: Helix-loop-helix DNA-binding domain superfamily (homologous_superfamily) [99-163]
- IPR045847: Transcription factor AIG1-like (family) [73-354]
Gene Ontology annotations:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0005515 (protein binding)
Biological Process (BP): GO:0008150 (biological process), GO:0065007 (biological regulation), GO:0050789 (regulation of biological process), GO:0019222 (regulation of metabolic process), GO:0050794 (regulation of cellular process), GO:0060255 (regulation of macromolecule metabolic process), GO:0031323 (regulation of cellular metabolic process), GO:0080090 (regulation of primary metabolic process), GO:0009889 (regulation of biosynthetic process), GO:0051171 (regulation of nitrogen compound metabolic process), GO:0019219 (regulation of nucleobase-containing compound metabolic process), GO:0051252 (regulation of RNA metabolic process), GO:0010556 (regulation of macromolecule biosynthetic process), GO:0010468 (regulation of gene expression), GO:0031326 (regulation of cellular biosynthetic process), GO:2001141 (regulation of RNA biosynthetic process), GO:0006355 (regulation of DNA-templated transcription), GO:1903506 (regulation of nucleic acid-templated transcription)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0043229 (intracellular organelle), GO:0043227 (membrane-bounded organelle), GO:0043231 (intracellular membrane-bounded organelle), GO:0005634 (nucleus)
Protein: SSD domain-containing protein (G5ECF2)
Organism: Caenorhabditis elegans
Function: Not known
Sequence: MSSSYFGASGPDPISRQSPAAVRFQRKVSTGSAPTVPPPAVPPPESSADEEEPRASSNNNYSSTSTVAAPTREPTRVSTLKREEKEKKQKERMERERRELEEKRVQEDEMKKEEHNHTVHPSLGERTSYVEEPPSTTTTLDRRDRKAEKALVRRITNEMQMATYVQQIDLSTVKQPVGAYTQGVFRIRMLRFAEAILRRTFWALGKFIANHKIVSILVALLCFATAFILPTLHKEHLYIDLPFSHILGSDSDVISNGIGISPKMQEFNSSNPAFSCMKWRDSNRFAVLLRTMASRDTILRKDAVLAYTALKKKLDHFPVEKREFMTQCSLECETDKDMVDRIIKKSPQVALTYPETFVSMSKDSTNLTRVYLGAAIGGVETDTDGAISKATSLLMNFELKDDLTGKEHNSWHRHFEDQTRLTAASNISLMSWSPETFKDTVVASLKDQYWCLQFCVIILFVFCFLGSFGINAYQSKPCLGIMIFITLVVGSITGLSMQFYRDLPVDPLVYPICFVTIGIGLLWLFQLQFSWSRYSSAAVHPTEKIAFILAHDAPGIAASAVVIVLTFLAMGAAIQNGHMVSSFLGIASSVAILLVFTVFFISVFVFIGGSREARGVKWYQIFKTGDTHFTAPQLASFDSASLFSLHDRLLDARPCASRAVGAFVISPKIRYPIIMLCTAYVFFAIYGFYNTGIDIKEEYFLPAGSSEKSFIEQYRDQFGKTTQFVELTIESSIEYHDHEVQNNIFDIMDFAIAEGYATRAVNWLAEFAKFEKASIYDVNPDTFVPVVNLVFLPSETYRKYTSDIVMDRFQTQIIKSRMYLELTAKGFAERTSFVDTILKKAAAKGIPLSVDIPSSMSLRHDISVFTSGMLAFGVAIVMLFFVSLLLLGQPALTVMLLITSIAVLGETVGYAYFWSVPMNIVTLTMALAGNALTCVIVIAFCYSYSMSGKSQIRAGVRIQYTFQATLVPVLFACIVPVLTFLPLLYVDVPVVNHLFKIVVLNATASLIHYLFFLPNMMLAFSERFGFSCTSFQCAELCCDMDDESSIYYIPTGGRAIHPEGLYHHPSYTYTVPKPLMNAPPPHYLAIAAPPVNSIYGQTEYTSRGEMKRVSRRNRRHSESSIGETENDGTPGRDRESRRRRQRRAVSRDSEIYEDLPSPRAVNSSRSTSPRRQQPGSMRRPNNHHSGSQNPRPQAFHYDEGAQWRPYVQPSPYMFYPGPVYGQQQRR
InterPro domains: - IPR051697: Patched domain-containing protein (family) [193-1022]
- IPR000731: Sterol-sensing domain (domain) [448-606]
Gene Ontology annotations:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0005515 (protein binding)
Biological Process (BP): GO:0008150 (biological process), GO:0032501 (multicellular organismal process), GO:0042303 (molting cycle), GO:0018996 (molting cycle, collagen and cuticulin-based cuticle)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0031975 (envelope), GO:0005737 (cytoplasm), GO:0012505 (endomembrane system), GO:0031967 (organelle envelope), GO:0005783 (endoplasmic reticulum), GO:0005635 (nuclear envelope), GO:0043229 (intracellular organelle), GO:0043227 (membrane-bounded organelle), GO:0043231 (intracellular membrane-bounded organelle), GO:0005634 (nucleus)
Protein: Os05g0421900 protein (Q6L4Y3)
Organism: Oryza sativa subsp. japonica (Rice)
Function: Not known
Sequence: MVYISNAQDASKLIVTAKGGGGEADDAAASSAAVVLDLWRQPAKIPAPFVWPRADVALPPSSPPTGELDVPVVDLAAALRDAAGMRRAVAQVAAACASHGFFQVSGHGVPPSLARAALDGAAGFFRLPPAAKQRARRAPGTVTGYTAAHADRFVDNLPWKETLSFGHRHANAAGNNSSTVADYFSTLGDDFKHLGEVYQEYCEAMEEVTKAIMAVLGESLGVGGGYYREFFEDSSSIMRCNYYPPCPEPERTLGTGPHCDPSALTVLLQDGDVDGLQVLVAGAWRPVRPLPGAFVVNIGDTFMALTNGRYKSCLHRAVVHREQERRSLAFFLCPREDRVVRPPAGAGAGERRLYPDFTWADFMRFTQRHYRADTRTLDAFARWLRPPACSGAAPVVGPPTTATQAATV
InterPro domains: - IPR026992: Non-haem dioxygenase, N-terminal domain (domain) [70-171]
- IPR050231: Iron/ascorbate-dependent oxidoreductase (family) [70-365]
- IPR005123: Oxoglutarate/iron-dependent dioxygenase domain (domain) [233-334]
- IPR044861: Isopenicillin N synthase-like, Fe(2+) 2OG dioxygenase domain (domain) [235-334]
- IPR027443: Isopenicillin N synthase-like superfamily (homologous_superfamily) [32-365]
Gene Ontology annotations:
Molecular Function (MF): GO:0003674 (molecular function), GO:0003824 (catalytic activity), GO:0016491 (oxidoreductase activity), GO:0051213 (dioxygenase activity), GO:0016705 (oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen), GO:0016706 (2-oxoglutarate-dependent dioxygenase activity)
Biological Process (BP): GO:0008150 (biological process), GO:0008152 (metabolic process), GO:0009987 (cellular process), GO:0044237 (cellular metabolic process), GO:0071704 (organic substance metabolic process), GO:0044281 (small molecule metabolic process), GO:0044238 (primary metabolic process), GO:0044255 (cellular lipid metabolic process), GO:0006629 (lipid metabolic process), GO:0006082 (organic acid metabolic process), GO:0006720 (isoprenoid metabolic process), GO:0043436 (oxoacid metabolic process), GO:0019752 (carboxylic acid metabolic process), GO:0006721 (terpenoid metabolic process), GO:0016101 (diterpenoid metabolic process), GO:0009685 (gibberellin metabolic process)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005737 (cytoplasm), GO:0005622 (intracellular anatomical structure)
Protein: Anthrone oxygenase encC (EC 1.-.-.-) (Endocrocin synthesis protein C) (A4DA85)
Organism: Aspergillus fumigatus (strain ATCC MYA-4609 / CBS 101355 / FGSC A1100 / Af293) (Neosartorya fumigata)
Function: Anthrone oxygenase; part of the gene cluster that mediates the biosynthesis of endocrocin, a simple anthraquinone interesting for many biotechnological applications. The pathway begins with the synthesis of atrochrysone thioester by the polyketide synthase (PKS) encA. The atrochrysone carboxyl ACP thioesterase encB then breaks the thioester bond and releases the atrochrysone carboxylic acid from encA. The atrochrysone carboxylic acid is then converted to endocrocin anthrone which is further oxidized into endocrocin by the anthrone oxygenase encC. The exact function of encD has not been identified yet, but it negatively regulates endocrocin production, likely through the modification of endocrocin itself.
Subcellular location: Membrane {ECO:0000255}; Multi-pass membrane protein {ECO:0000255}.
Sequence: MASVQGLIKIVAITGGVWLSGKITAHSLVSVPALLQTRSADGLSPCTILRVWRRIYEQGHRHSPQIAACTSTAFAYLAWCASDRTPRLLYGTAACSVMGIVPYTLLFMGPTNSRLLERSAAEEEKVPGATRGEDMVNVPSEMTTEELLSHWRFLAGIRGLLPLAGGILGLFAALYSNEGAR
InterPro domains: - IPR013901: Anthrone oxygenase (family) [52-168]
Interaction partners: - Atrochrysone carboxyl ACP thioesterase
- Atrochrysone carboxylic acid synthase
Gene Ontology annotations:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0005515 (protein binding)
Biological Process (BP): GO:0008150 (biological process), GO:0008152 (metabolic process), GO:0009987 (cellular process), GO:0009058 (biosynthetic process), GO:0044237 (cellular metabolic process), GO:0019748 (secondary metabolic process), GO:0071704 (organic substance metabolic process), GO:0042440 (pigment metabolic process), GO:0044550 (secondary metabolite biosynthetic process), GO:1901615 (organic hydroxy compound metabolic process), GO:0044249 (cellular biosynthetic process), GO:0006725 (cellular aromatic compound metabolic process), GO:1901360 (organic cyclic compound metabolic process), GO:1901576 (organic substance biosynthetic process), GO:0006582 (melanin metabolic process), GO:0046148 (pigment biosynthetic process), GO:1901617 (organic hydroxy compound biosynthetic process), GO:1901362 (organic cyclic compound biosynthetic process), GO:0042438 (melanin biosynthetic process), GO:0019438 (aromatic compound biosynthetic process), GO:0018958 (phenol-containing compound metabolic process), GO:0046189 (phenol-containing compound biosynthetic process)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0005737 (cytoplasm), GO:0043229 (intracellular organelle), GO:0005739 (mitochondrion), GO:0043227 (membrane-bounded organelle), GO:0043231 (intracellular membrane-bounded organelle)
Protein: Alpha-lactalbumin (Lactose synthase B protein) (allergen Bos d 4) (P00711)
Organism: Bos taurus (Bovine)
Function: Regulatory subunit of lactose synthase, changes the substrate specificity of galactosyltransferase in the mammary gland making glucose a good acceptor substrate for this enzyme. This enables LS to synthesize lactose, the major carbohydrate component of milk. In other tissues, galactosyltransferase transfers galactose onto the N-acetylglucosamine of the oligosaccharide chains in glycoproteins.
Subcellular location: Secreted.
Sequence: MMSFVSLLLVGILFHATQAEQLTKCEVFRELKDLKGYGGVSLPEWVCTTFHTSGYDTQAIVQNNDSTEYGLFQINNKIWCKDDQNPHSSNICNISCDKFLDDDLTDDIMCVKKILDKVGINYWLAHKALCSEKLDQWLCEKL
InterPro domains: - IPR023346: Lysozyme-like domain superfamily (homologous_superfamily) [21-141]
- IPR019799: Glycoside hydrolase family 22 domain (domain) [92-110]
- IPR001916: Glycoside hydrolase, family 22 (family) [2-142]
- IPR000545: Lactalbumin (family) [26-138]
Interaction partners: - Beta-lactoglobulin
- Lactotransferrin
- Beta-1,4-galactosyltransferase 1
- Albumin
- Alpha-S1-casein
- Beta-casein
- Lactoperoxidase
- Kappa-casein
- Alpha-S2-casein
- UDP-glucose 4-epimerase
Gene Ontology annotations:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0005515 (protein binding)
Biological Process (BP): GO:0008150 (biological process), GO:0050896 (response to stimulus), GO:0042221 (response to chemical), GO:0009719 (response to endogenous stimulus), GO:1901700 (response to oxygen-containing compound), GO:0010033 (response to organic substance), GO:0009725 (response to hormone), GO:0048545 (response to steroid hormone), GO:0097305 (response to alcohol), GO:0014070 (response to organic cyclic compound), GO:1901654 (response to ketone), GO:0032355 (response to estradiol), GO:0033993 (response to lipid), GO:0031960 (response to corticosteroid), GO:0032570 (response to progesterone), GO:0051385 (response to mineralocorticoid)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005576 (extracellular region), GO:0005615 (extracellular space)
Protein: Curcumin synthase 3 (EC 2.3.1.217) (Demethoxycurcumin synthase) (EC 2.3.1.219) (C6L7V9)
Organism: Curcuma longa (Turmeric) (Curcuma domestica)
Function: Catalyzes the synthesis of curcumin by condensing feruloyl-CoA with a diketide-CoA in the curcuminoid biosynthesis. Also acts as a demethoxycurcumin synthase by accepting 4-coumaroyl-CoA as a starter substrate instead of feruloyl-CoA.
Sequence: MGSLQAMRRAQRAQGPATIMAVGTSNPPNLYEQTSYPDFYFRVTNSDHKHALKNKFRVICEKTKVKRRYLHLTEEILKQRPKLCSYMEPSFDDRQDIVVEEIPKLAKEAAEKAIKEWGRPKSEITHLVFCSISGIDMPGADYRLATLLGLPLSVNRLMLYSQACHMGAQMLRIAKDLAENNRGARVLAVSCEITVLSFRGPDAGDFEALACQAGFGDGAAAVVVGADPLPGVERPIYEIAAAMQETVPESERAVGGHLREIGWTFHFFNQLPKLIAENIEGSLARAFKPLGISEWNDVFWVAHPGNWGIMDAIETKLGLEQGKLATARHVFSEYGNMQSATVYFVMDEVRKRSAAEGRATTGEGLEWGVLFGFGPGLTIETVVLRSVPLP
InterPro domains: - IPR001099: Chalcone/stilbene synthase, N-terminal (domain) [6-228]
- IPR016039: Thiolase-like (homologous_superfamily) [1-388]
- IPR012328: Chalcone/stilbene synthase, C-terminal (domain) [238-388]
- IPR011141: Polyketide synthase, type III (family) [3-389]
Gene Ontology annotations:
Molecular Function (MF): GO:0003674 (molecular function), GO:0003824 (catalytic activity), GO:0016740 (transferase activity), GO:0016746 (acyltransferase activity), GO:0016747 (acyltransferase activity, transferring groups other than amino-acyl groups)
Biological Process (BP): GO:0008150 (biological process), GO:0008152 (metabolic process), GO:0009058 (biosynthetic process), GO:0071704 (organic substance metabolic process), GO:0009812 (flavonoid metabolic process), GO:1901576 (organic substance biosynthetic process), GO:0009813 (flavonoid biosynthetic process)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0032991 (protein-containing complex), GO:1902494 (catalytic complex), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0005737 (cytoplasm), GO:0043229 (intracellular organelle), GO:0043227 (membrane-bounded organelle), GO:0043231 (intracellular membrane-bounded organelle)
Protein: Phosphatidate cytidylyltransferase (EC 2.7.7.41) (F4JL60)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Not known
Subcellular location: Membrane {ECO:0000256|ARBA:ARBA00004141}; Multi-pass membrane protein {ECO:0000256|ARBA:ARBA00004141}.
Sequence: MLDVLKFNFKFSQVVSVFVSNSSNMQKEIAGDAPSAPTTRVRHRKRNSDVGAGAGKPNGNHLLVNDSKKYKSFLIRAYSTFWMIGGFALIVYLGHLYITAMVVVIQIFMARELFNLLRKTHEDKQLPGFRLLNWHFFFTAMLFVYGRILSQRLVNTVTPDKVLYRLVTSLIKYHMAICYSLYISGFVWFILTLKKKMYKYQFSQYAWTHMILIVVFTQSSFTVANIFEGIFWFLLPASLIVINDIFAYICGFFFGRTPLIKLSPKKTWEGFIGASITTVISAFLLANIMGRFLWLTCPREDLSTGWLLCDPGPLFKQETHALPGWISDWLPWKEISILPVQWHALCLGLFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGITDRMDCQMVMAVFAYIYHQSFVVPEVLSVDKLLDQIITSLTLEEQQALLVKLGQMLQEKVIGS
InterPro domains: - IPR016720: Phosphatidate cytidylyltransferase, eukaryota (family) [18-447]
- IPR000374: Phosphatidate cytidylyltransferase (family) [363-389]
Gene Ontology annotations:
Molecular Function (MF): GO:0003674 (molecular function), GO:0003824 (catalytic activity), GO:0016740 (transferase activity), GO:0016772 (transferase activity, transferring phosphorus-containing groups), GO:0016779 (nucleotidyltransferase activity), GO:0070567 (cytidylyltransferase activity)
Biological Process (BP): GO:0008150 (biological process), GO:0008152 (metabolic process), GO:0032502 (developmental process), GO:0040007 (growth), GO:0009987 (cellular process), GO:0048589 (developmental growth), GO:0009058 (biosynthetic process), GO:0044237 (cellular metabolic process), GO:0071704 (organic substance metabolic process), GO:0044238 (primary metabolic process), GO:0044255 (cellular lipid metabolic process), GO:1901576 (organic substance biosynthetic process), GO:0006629 (lipid metabolic process), GO:0019637 (organophosphate metabolic process), GO:0006793 (phosphorus metabolic process), GO:0006796 (phosphate-containing compound metabolic process), GO:0008610 (lipid biosynthetic process), GO:0006644 (phospholipid metabolic process), GO:0090407 (organophosphate biosynthetic process), GO:0008654 (phospholipid biosynthetic process)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0005737 (cytoplasm), GO:0012505 (endomembrane system), GO:0043229 (intracellular organelle), GO:0005783 (endoplasmic reticulum), GO:0043227 (membrane-bounded organelle), GO:0043231 (intracellular membrane-bounded organelle), GO:0005634 (nucleus)
Protein: Small ribosomal subunit protein uS5 (30S ribosomal protein S5) (P9WH33)
Organism: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Function: With S4 and S12 plays an important role in translational accuracy.
Sequence: MAEQPAGQAGTTDNRDARGDREGRRRDSGRGSRERDGEKSNYLERVVAINRVSKVVKGGRRFSFTALVIVGDGNGMVGVGYGKAKEVPAAIAKGVEEARKSFFRVPLIGGTITHPVQGEAAAGVVLLRPASPGTGVIAGGAARAVLECAGVHDILAKSLGSDNAINVVHATVAALKLLQRPEEVAARRGLPIEDVAPAGMLKARRKSEALAASVLPDRTI
InterPro domains: - IPR018192: Small ribosomal subunit protein uS5, N-terminal, conserved site (conserved_site) [59-91]
- IPR014721: Small ribosomal subunit protein uS5 domain 2-type fold, subgroup (homologous_superfamily) [106-197]
- IPR020568: Ribosomal protein uS5 domain 2-type superfamily (homologous_superfamily) [110-189]
- IPR013810: Small ribosomal subunit protein uS5, N-terminal (domain) [42-106]
- IPR005712: Small ribosomal subunit protein uS5, bacterial-type (family) [1-194]
- IPR005324: Small ribosomal subunit protein uS5, C-terminal (domain) [119-188]
- IPR000851: Small ribosomal subunit protein uS5 (family) [38-198]
Interaction partners: - Small ribosomal subunit protein uS13
- Small ribosomal subunit protein bS1
- Large ribosomal subunit protein bL35
- Small ribosomal subunit protein bS16
- Large ribosomal subunit protein uL3
- Large ribosomal subunit protein uL14
- Large ribosomal subunit protein uL29
- Small ribosomal subunit protein bS20
- Small ribosomal subunit protein uS17
- Large ribosomal subunit protein uL24
Gene Ontology annotations:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0005515 (protein binding)
Biological Process (BP): GO:0008150 (biological process), GO:0050896 (response to stimulus), GO:0009987 (cellular process), GO:0071840 (cellular component organization or biogenesis), GO:0042221 (response to chemical), GO:0044085 (cellular component biogenesis), GO:0016043 (cellular component organization), GO:1901700 (response to oxygen-containing compound), GO:0010033 (response to organic substance), GO:0033993 (response to lipid), GO:0043933 (protein-containing complex organization), GO:0006996 (organelle organization), GO:0022613 (ribonucleoprotein complex biogenesis), GO:0022607 (cellular component assembly), GO:0070925 (organelle assembly), GO:0065003 (protein-containing complex assembly), GO:0042254 (ribosome biogenesis), GO:0042274 (ribosomal small subunit biogenesis), GO:0022618 (ribonucleoprotein complex assembly), GO:0071826 (ribonucleoprotein complex subunit organization), GO:0000028 (ribosomal small subunit assembly), GO:0042255 (ribosome assembly), GO:0140694 (non-membrane-bounded organelle assembly)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0071944 (cell periphery), GO:0030312 (external encapsulating structure), GO:0005618 (cell wall), GO:0009274 (peptidoglycan-based cell wall)