Protein: ATP-dependent RNA helicase (EC 3.6.4.13) (D6XFK8)
Organism: Trypanosoma brucei brucei (strain 927/4 GUTat10.1)
Function: Not known
Sequence: MQRNVIQSNSGRGLRSILDQYEDFKLIMQLRKNGRGNYYRYQQKLWPSAEALERDMTERLYSSTERTPLALLPQPKRAPSPRTCVLEGCGAAALLEGAENAVQISEDLNDNQKEVNEPLDLTDSTETMFAELYGTDQSINNKIITDNDLQGTVLEAAQQRARTLIFNDLRVNELATSPAVASTNSRRTTTILSAKDKGSMAWEALGLCPTLSKQVIAKYSAAPTRLQCRLLPALLHEDHNDVLFNGVTGSGKTSALLLALLQAVRNESAGLNVFVASNAITAMRARDQLQALCGELGGAMVDRPRDDFTWLFMGIFSGEYEAYYRTLRRSLNSDHGPVRIFITTADTFCQLLFEKKMEFEAFGYLRRVYVDDVGVQLPMVPPHAPVHEMRERLRNPLPCELLLGTLHQLPGPHIRSILQLGLVSADMETALKDHLKSLCVKLERHTIVLSAVRIPSTIHCLFSFHLAHEDVYEYVVQLIWNARATIPGRAVIYVRYEDNILQVRTKLRQLGMDVKLFSEVYHDGVFRDSWKFLLLHESEAFGVDLPLVSHVFITFCPHSTCSFQHMCGRTGRLGNVGWVYTITDKREAKAVREVVTQLEVDFCSHVVDSNLAQVPPSDMDRLTKEFELYGLDPQYAVRQHYVVQSENPDMAYRSREFFSKPAEKQFQMEDYTPTPVLHRRFVNAKKLAKDVERDPSVALTLQKEGLLNSKLAPTKKMRNLLNNKSRSFNAALYGMKSNK
InterPro domains: - IPR011545: DEAD/DEAH-box helicase domain (domain) [224-276]
- IPR001650: Helicase, C-terminal domain-like (domain) [474-622]
- IPR027417: P-loop containing nucleoside triphosphate hydrolase (homologous_superfamily) [180-613]
Interaction partners: - Nucleolar protein, putative
- Ribosome biogenesis protein BOP1 homolog
- RNA-binding protein, putative
- Pescadillo homolog
- Nop14-like protein
- Sas10 C-terminal domain-containing protein
- Nucleolar complex protein 2
- RNA helicase
- U3 small nucleolar RNA-associated protein 14
- BING4 C-terminal domain-containing protein
Gene Ontology annotations:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0097159 (organic cyclic compound binding), GO:1901363 (heterocyclic compound binding), GO:0003676 (nucleic acid binding), GO:0003723 (RNA binding), GO:0003729 (mRNA binding)
Biological Process (BP): GO:0008150 (biological process), GO:0008152 (metabolic process), GO:0009987 (cellular process), GO:0044237 (cellular metabolic process), GO:0006807 (nitrogen compound metabolic process), GO:0071840 (cellular component organization or biogenesis), GO:0071704 (organic substance metabolic process), GO:0044238 (primary metabolic process), GO:1901360 (organic cyclic compound metabolic process), GO:0044085 (cellular component biogenesis), GO:0006139 (nucleobase-containing compound metabolic process), GO:0046483 (heterocycle metabolic process), GO:0016043 (cellular component organization), GO:0006725 (cellular aromatic compound metabolic process), GO:0034641 (cellular nitrogen compound metabolic process), GO:0043170 (macromolecule metabolic process), GO:0090304 (nucleic acid metabolic process), GO:0022613 (ribonucleoprotein complex biogenesis), GO:0043933 (protein-containing complex organization), GO:0006996 (organelle organization), GO:0010467 (gene expression), GO:0022607 (cellular component assembly), GO:0070925 (organelle assembly), GO:0042254 (ribosome biogenesis), GO:0016070 (RNA metabolic process), GO:0022618 (ribonucleoprotein complex assembly), GO:0065003 (protein-containing complex assembly), GO:0006396 (RNA processing), GO:0071826 (ribonucleoprotein complex subunit organization), GO:0042255 (ribosome assembly), GO:0034470 (ncRNA processing), GO:0140694 (non-membrane-bounded organelle assembly), GO:0006364 (rRNA processing), GO:0034660 (ncRNA metabolic process), GO:0016072 (rRNA metabolic process)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0020023 (kinetoplast), GO:0005737 (cytoplasm), GO:0005739 (mitochondrion), GO:0043229 (intracellular organelle), GO:0043227 (membrane-bounded organelle), GO:0043231 (intracellular membrane-bounded organelle)