Protein: Protein trichome birefringence-like 39 (Q9SIN2)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: May act as a bridging protein that binds pectin and other cell wall polysaccharides. Probably involved in maintaining esterification of pectins (By similarity). May be involved in the specific O-acetylation of cell wall polymers (By similarity).
Subcellular location: Membrane {ECO:0000305}; Single-pass type II membrane protein {ECO:0000305}.
Sequence: MGFTSRGNPSFLFFFFFFLCLSTVSAYINSTSSNNDEVRRELASGRCNWFRGNWVYDVKYPLYDPYKCPFIDPQFNCKKYGRPDNAYLKYRWQPSSCSLPRFNGLYFLRRMRGKKIMFVGDSLSTNMWQSLACLIHSWVPNTRYTLIRQKGLASLTFEEYGVTLLLYRTQFLVDLNVEKVGRVLKLDSIKQGNMWRGMDVLIFNSWHWWTHTEHIQPWDYMEDGNRLYKDMNRLVAFYKGMTTWARWVNAYVDPSKTKVFFNGVSPTHYEGKDWGEPMNSCRSQTQPFYGRKYPGGTPMAWVILNKVMRRLKKPVHWLDITGLSQLRKDAHPSAFSGNHPGNDCSHWCLPGLPDTWNLLFYSTLFSS
InterPro domains: - IPR029962: Trichome birefringence-like family (family) [22-360]
- IPR025846: Trichome birefringence-like, N-terminal domain (domain) [46-98]
- IPR026057: Trichome birefringence-like, C-terminal domain (domain) [99-362]
Interaction partners: - Allergen-like protein BRSn20
- CBS domain-containing protein
Gene Ontology annotations:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0003824 (catalytic activity), GO:0097159 (organic cyclic compound binding), GO:0016740 (transferase activity), GO:1901363 (heterocyclic compound binding), GO:0003676 (nucleic acid binding), GO:0016746 (acyltransferase activity), GO:0003677 (DNA binding), GO:0016747 (acyltransferase activity, transferring groups other than amino-acyl groups), GO:0008374 (O-acyltransferase activity), GO:0043565 (sequence-specific DNA binding), GO:0016407 (acetyltransferase activity), GO:0016413 (O-acetyltransferase activity)
Biological Process (BP): GO:0008150 (biological process), GO:0065007 (biological regulation), GO:0050896 (response to stimulus), GO:0050789 (regulation of biological process), GO:0009987 (cellular process), GO:0023052 (signaling), GO:0042221 (response to chemical), GO:0071554 (cell wall organization or biogenesis), GO:0009719 (response to endogenous stimulus), GO:0050794 (regulation of cellular process), GO:0051716 (cellular response to stimulus), GO:0071840 (cellular component organization or biogenesis), GO:0007154 (cell communication), GO:0007165 (signal transduction), GO:0009755 (hormone-mediated signaling pathway), GO:0070887 (cellular response to chemical stimulus), GO:0071495 (cellular response to endogenous stimulus), GO:0016043 (cellular component organization), GO:1901700 (response to oxygen-containing compound), GO:0071669 (plant-type cell wall organization or biogenesis), GO:0071555 (cell wall organization), GO:0010033 (response to organic substance), GO:0009725 (response to hormone), GO:0042545 (cell wall modification), GO:0032870 (cellular response to hormone stimulus), GO:0071310 (cellular response to organic substance), GO:0033993 (response to lipid), GO:0009664 (plant-type cell wall organization), GO:0009867 (jasmonic acid mediated signaling pathway), GO:0045229 (external encapsulating structure organization), GO:1901701 (cellular response to oxygen-containing compound), GO:0070542 (response to fatty acid), GO:0009753 (response to jasmonic acid), GO:0071395 (cellular response to jasmonic acid stimulus), GO:0009827 (plant-type cell wall modification), GO:0071398 (cellular response to fatty acid), GO:0071396 (cellular response to lipid)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0005737 (cytoplasm), GO:0012505 (endomembrane system), GO:0005794 (Golgi apparatus), GO:0043229 (intracellular organelle), GO:0043227 (membrane-bounded organelle), GO:0043231 (intracellular membrane-bounded organelle)