wanglab/bioreason-pro-rl-reasoning-data huggingface dataset:
Protein: Ovalbumin-related protein Y (Gene Y protein) (P01014)
Organism: Gallus gallus (Chicken)
Function: Not known
Subcellular location: Secreted {ECO:0000269|PubMed:16428832}.
Sequence: MDSISVTNAKFCFDVFNEMKVHHVNENILYCPLSILTALAMVYLGARGNTESQMKKVLHFDSITGAGSTTDSQCGSSEYVHNLFKELLSEITRPNATYSLEIADKLYVDKTFSVLPEYLSCARKFYTGGVEEVNFKTAAEEARQLINSWVEKETNGQIKDLLVSSSIDFGTTMVFINTIYFKGIWKIAFNTEDTREMPFSMTKEESKPVQMMCMNNSFNVATLPAEKMKILELPYASGDLSMLVLLPDEVSGLERIEKTINFDKLREWTSTNAMAKKSMKVYLPRMKIEEKYNLTSILMALGMTDLFSRSANLTGISSVDNLMISDAVHGVFMEVNEEGTEATGSTGAIGNIKHSLELEEFRADHPFLFFIRYNPTNAILFFGRYWSP
InterPro domains: - IPR042178: Serpin superfamily, domain 1 (homologous_superfamily) [13-335]
- IPR000215: Serpin family (family) [7-388]
- IPR023795: Serpin, conserved site (conserved_site) [361-371]
- IPR036186: Serpin superfamily (homologous_superfamily) [3-388]
- IPR042185: Serpin superfamily, domain 2 (homologous_superfamily) [187-381]
- IPR023796: Serpin domain (domain) [7-388]
Interaction partners: - Protein TENP
Gene Ontology annotations:
Molecular Function (MF): GO:0003674 (molecular function), GO:0098772 (molecular function regulator activity), GO:0005488 (binding), GO:0030234 (enzyme regulator activity), GO:0005515 (protein binding), GO:0140678 (molecular function inhibitor activity), GO:0061134 (peptidase regulator activity), GO:0019899 (enzyme binding), GO:0004857 (enzyme inhibitor activity), GO:0061135 (endopeptidase regulator activity), GO:0030414 (peptidase inhibitor activity), GO:0002020 (protease binding), GO:0004866 (endopeptidase inhibitor activity), GO:0004867 (serine-type endopeptidase inhibitor activity)
Biological Process (BP): GO:0008150 (biological process), GO:0050896 (response to stimulus), GO:0002376 (immune system process), GO:0009987 (cellular process), GO:0032501 (multicellular organismal process), GO:0045321 (leukocyte activation), GO:0001775 (cell activation), GO:0042221 (response to chemical), GO:0010033 (response to organic substance), GO:0002274 (myeloid leukocyte activation), GO:0034097 (response to cytokine), GO:0042116 (macrophage activation)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0005829 (cytosol), GO:0005737 (cytoplasm), GO:0031974 (membrane-enclosed lumen), GO:0012505 (endomembrane system), GO:0005576 (extracellular region), GO:0031410 (cytoplasmic vesicle), GO:0043229 (intracellular organelle), GO:0005768 (endosome), GO:0005773 (vacuole), GO:0043233 (organelle lumen), GO:0005783 (endoplasmic reticulum), GO:0043227 (membrane-bounded organelle), GO:0000323 (lytic vacuole), GO:0030139 (endocytic vesicle), GO:0043231 (intracellular membrane-bounded organelle), GO:0005769 (early endosome), GO:0031904 (endosome lumen), GO:0031982 (vesicle), GO:0070013 (intracellular organelle lumen), GO:0005764 (lysosome), GO:0097708 (intracellular vesicle), GO:0045335 (phagocytic vesicle), GO:0005767 (secondary lysosome), GO:0032010 (phagolysosome)
Protein: KH RNA binding domain containing, signal transduction associated 3 (E5RJZ9)
Organism: Homo sapiens (Human)
Function: Not known
Sequence: MEIEKFQKGEGKDEEKYIDVVINKNMKLGQKVLIPVKQFPKFNFVGKLLGPRGNSLKRLQEETLTKMSILGKGSMRDKAKEEELRKSGEAKYFHLNDDLHVLIEVFAPPAEAYARMGHALEEIKKFLIPDYNDEIRQAQLQELTYLNGGSENADVPVVRGKPTLRTRGVPAPAITRGRGGVTARPVGVVVPRGTPTPRGVLSTRGPVSRGRGLLTPRARGVPPTGYRPPPPPPTQETYGEYDYDDGYGTAYDEQSYDSYDNSYST
InterPro domains: - IPR036612: K Homology domain, type 1 superfamily (homologous_superfamily) [1-157]
- IPR045071: KH domain-containing BBP-like (family) [10-264]
- IPR004087: K Homology domain (domain) [26-124]
- IPR055256: KHDC4/BBP-like, KH-domain type I (domain) [39-104]
- IPR032571: KHDRBS, Qua1 domain (domain) [2-25]
Gene Ontology annotations:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0097159 (organic cyclic compound binding), GO:1901363 (heterocyclic compound binding), GO:0005515 (protein binding), GO:0003676 (nucleic acid binding), GO:0042802 (identical protein binding), GO:0019904 (protein domain specific binding), GO:0003723 (RNA binding)
Biological Process (BP): GO:0008150 (biological process), GO:0008152 (metabolic process), GO:0009987 (cellular process), GO:0044237 (cellular metabolic process), GO:0071704 (organic substance metabolic process), GO:0044238 (primary metabolic process), GO:0006807 (nitrogen compound metabolic process), GO:0006725 (cellular aromatic compound metabolic process), GO:0034641 (cellular nitrogen compound metabolic process), GO:1901360 (organic cyclic compound metabolic process), GO:0006139 (nucleobase-containing compound metabolic process), GO:0043170 (macromolecule metabolic process), GO:0046483 (heterocycle metabolic process), GO:0090304 (nucleic acid metabolic process), GO:0010467 (gene expression), GO:0016070 (RNA metabolic process), GO:0006396 (RNA processing), GO:0008380 (RNA splicing), GO:0006397 (mRNA processing), GO:0016071 (mRNA metabolic process), GO:0000398 (mRNA splicing, via spliceosome), GO:0000375 (RNA splicing, via transesterification reactions), GO:0000377 (RNA splicing, via transesterification reactions with bulged adenosine as nucleophile)
Cellular Component (CC): GO:0005575 (cellular component), GO:0032991 (protein-containing complex), GO:0110165 (cellular anatomical entity), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0031974 (membrane-enclosed lumen), GO:0005654 (nucleoplasm), GO:0043233 (organelle lumen), GO:0043229 (intracellular organelle), GO:0043227 (membrane-bounded organelle), GO:0043231 (intracellular membrane-bounded organelle), GO:0070013 (intracellular organelle lumen), GO:0031981 (nuclear lumen), GO:0005634 (nucleus)
Protein: TM2 domain-containing protein 2 (Beta-amyloid-binding protein-like protein 1) (BBP-like protein 1) (Q9BX73)
Organism: Homo sapiens (Human)
Function: Not known
Subcellular location: Membrane {ECO:0000305}; Multi-pass membrane protein {ECO:0000305}.
Sequence: MVLGGCPVSYLLLCGQAALLLGNLLLLHCVSRSHSQNATAEPELTSAGAAQPEGPGGAASWEYGDPHSPVILCSYLPDEFIECEDPVDHVGNATASQELGYGCLKFGGQAYSDVEHTSVQCHALDGIECASPRTFLRENKPCIKYTGHYFITTLLYSFFLGCFGVDRFCLGHTGTAVGKLLTLGGLGIWWFVDLILLITGGLMPSDGSNWCTVY
InterPro domains: - IPR050932: TM2 domain-containing protein 1-3-like (family) [69-213]
- IPR007829: TM2 domain (domain) [147-195]
Interaction partners: - TM2 domain-containing protein 1
Gene Ontology annotations:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0005515 (protein binding)
Biological Process (BP): GO:0008150 (biological process), GO:0065007 (biological regulation), GO:0048518 (positive regulation of biological process), GO:0050789 (regulation of biological process), GO:0048583 (regulation of response to stimulus), GO:0023051 (regulation of signaling), GO:0023056 (positive regulation of signaling), GO:0048584 (positive regulation of response to stimulus), GO:0050794 (regulation of cellular process), GO:0048522 (positive regulation of cellular process), GO:0009967 (positive regulation of signal transduction), GO:0010647 (positive regulation of cell communication), GO:0009966 (regulation of signal transduction), GO:0010646 (regulation of cell communication), GO:0045747 (positive regulation of Notch signaling pathway), GO:0008593 (regulation of Notch signaling pathway)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0071944 (cell periphery), GO:0016020 (membrane), GO:0005886 (plasma membrane)
Protein: Calbindin (H0ZNK9)
Organism: Taeniopygia guttata (Zebra finch) (Poephila guttata)
Function: Not known
Sequence: MTAETHLQGVEISAAQFFEIWHHYDSDGNGFMDGKELQNFIQELQQARKKAGLDLTPEMKAFVDQYGKSTDGKIGIVELAQVLPTEENFLLFFRCQQLKSSEDFMQTWRKYDSDHSGFIDSEELKSFLKDLLQKANKQIEDSKLTEYTEIMLRMFDANNDGKLELTELARLLPVQENFLIKFQGVKMCAKEFNNAFEMYDQDGNGYIDENELDALLKDLCEKNKKTLPTLQHTRKASWPCLMEESFTEQNWLLFSVLRKTRALLSCPLN
InterPro domains: - IPR011992: EF-hand domain pair (homologous_superfamily) [15-225]
- IPR018247: EF-Hand 1, calcium-binding site (binding_site) [25-212]
- IPR002048: EF-hand domain (domain) [12-222]
- IPR051001: Calbindin Calcium-Binding (family) [15-235]
Gene Ontology annotations:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0043167 (ion binding), GO:0043169 (cation binding), GO:0046872 (metal ion binding), GO:0005509 (calcium ion binding)
Biological Process (BP): GO:0008150 (biological process), GO:0051179 (localization), GO:0051234 (establishment of localization), GO:0006810 (transport), GO:0006811 (monoatomic ion transport), GO:0071702 (organic substance transport), GO:0006812 (monoatomic cation transport), GO:0006816 (calcium ion transport), GO:0030001 (metal ion transport)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0150034 (distal axon), GO:0042995 (cell projection), GO:0098793 (presynapse), GO:0071944 (cell periphery), GO:0030054 (cell junction), GO:0044306 (neuron projection terminus), GO:0036477 (somatodendritic compartment), GO:0005737 (cytoplasm), GO:0098862 (cluster of actin-based cell projections), GO:0120025 (plasma membrane bounded cell projection), GO:0043679 (axon terminus), GO:0043229 (intracellular organelle), GO:0045202 (synapse), GO:0005938 (cell cortex), GO:0032421 (stereocilium bundle), GO:0032420 (stereocilium), GO:0043228 (non-membrane-bounded organelle), GO:0043197 (dendritic spine), GO:0099523 (presynaptic cytosol), GO:0097447 (dendritic tree), GO:0043227 (membrane-bounded organelle), GO:0043195 (terminal bouton), GO:0098858 (actin-based cell projection), GO:0043231 (intracellular membrane-bounded organelle), GO:0043232 (intracellular non-membrane-bounded organelle), GO:0030425 (dendrite), GO:0043005 (neuron projection), GO:0044305 (calyx of Held), GO:0030864 (cortical actin cytoskeleton), GO:0005634 (nucleus), GO:0005856 (cytoskeleton), GO:0030424 (axon), GO:0044309 (neuron spine), GO:0015629 (actin cytoskeleton)
Protein: Ribosome biogenesis protein, putative (Q388D6)
Organism: Trypanosoma brucei brucei (strain 927/4 GUTat10.1)
Function: Not known
Subcellular location: Nucleus, nucleolus {ECO:0000256|ARBA:ARBA00004604}.
Sequence: MVKREKRQRLADSSEEHGGTQETKQEVHGERGVVEESMIGEMQLKRATTDKRMTNRQKCLVLGSRNISSRDRHLLLDIRNLMPHAREHPKLGRTGGLGDSVIELCELHQCNSSLFIEAHRQDISYLWIAQAPRGPSVKMQLTNVHTADELRMAGNCLKYSRPLLHFDRDFETQPHLRVVKSLLQMTFNTPRYHPRSKPFVDHILCFFYLDGHIWFRHYQIIDTEPKSLMEIGPRFTLEPTSIFNGCFKGNVIWKNALARTPTEQRRDRKTRRLEKVHMNEAVKAKSKIHKALNPAPEPNPLDSVFRD
InterPro domains: - IPR007109: Brix domain (domain) [57-248]
- IPR026532: Ribosome biogenesis protein BRX1 (family) [5-306]
Interaction partners: - RNA-binding protein, putative
- rRNA processing protein, putative
- 60S ribosome subunit biogenesis protein NIP7 homolog
- Uncharacterized protein
- Ribosome biogenesis protein BOP1 homolog
- NLE domain-containing protein
- Nucleolar GTP-binding protein 1
- RNA processing factor 1, putative
- Nucleolar complex protein 2
- Pescadillo homolog
Gene Ontology annotations:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0097159 (organic cyclic compound binding), GO:1901363 (heterocyclic compound binding), GO:0005515 (protein binding), GO:0003676 (nucleic acid binding), GO:0003723 (RNA binding), GO:0019843 (rRNA binding), GO:0008097 (5S rRNA binding)
Biological Process (BP): GO:0008150 (biological process), GO:0008152 (metabolic process), GO:0009987 (cellular process), GO:0071840 (cellular component organization or biogenesis), GO:0044238 (primary metabolic process), GO:0044237 (cellular metabolic process), GO:0071704 (organic substance metabolic process), GO:0006807 (nitrogen compound metabolic process), GO:0006725 (cellular aromatic compound metabolic process), GO:0034641 (cellular nitrogen compound metabolic process), GO:1901360 (organic cyclic compound metabolic process), GO:0044085 (cellular component biogenesis), GO:0006139 (nucleobase-containing compound metabolic process), GO:0043170 (macromolecule metabolic process), GO:0046483 (heterocycle metabolic process), GO:0090304 (nucleic acid metabolic process), GO:0010467 (gene expression), GO:0022613 (ribonucleoprotein complex biogenesis), GO:0042254 (ribosome biogenesis), GO:0016070 (RNA metabolic process), GO:0006396 (RNA processing), GO:0042273 (ribosomal large subunit biogenesis), GO:0034470 (ncRNA processing), GO:0006364 (rRNA processing), GO:0034660 (ncRNA metabolic process), GO:0016072 (rRNA metabolic process)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0031974 (membrane-enclosed lumen), GO:0043233 (organelle lumen), GO:0043229 (intracellular organelle), GO:0043227 (membrane-bounded organelle), GO:0043228 (non-membrane-bounded organelle), GO:0043231 (intracellular membrane-bounded organelle), GO:0070013 (intracellular organelle lumen), GO:0043232 (intracellular non-membrane-bounded organelle), GO:0031981 (nuclear lumen), GO:0005730 (nucleolus), GO:0005634 (nucleus)
Protein: Mannitol operon repressor (Mannitol repressor protein) (P0AF10)
Organism: Escherichia coli (strain K12)
Function: Involved in the repression of the expression of the mannitol mtlADR operon. Does not bind the operator/promoter regulatory region of this operon. Therefore, seems to belong to a new class of transcription factors in bacteria that may regulate gene expression indirectly, perhaps as a part of a larger transcriptional complex.
Sequence: MVDQAQDTLRPNNRLSDMQATMEQTQAFENRVLERLNAGKTVRSFLITAVELLTEAVNLLVLQVFRKDDYAVKYAVEPLLDGDGPLGDLSVRLKLIYGLGVINRQEYEDAELLMALREELNHDGNEYAFTDDEILGPFGELHCVAALPPPPQFEPADSSLYAMQIQRYQQAVRSTMVLSLTELISKISLKKAFQK
InterPro domains: - IPR038026: MtlR-like superfamily (homologous_superfamily) [26-187]
- IPR007761: Mannitol repressor MtlR-like (family) [6-195]
Interaction partners: - Mannitol-1-phosphate 5-dehydrogenase
- Phosphocarrier protein HPr
- PTS system mannitol-specific EIICBA component
- Uncharacterized protein YibL
Gene Ontology annotations:
Molecular Function (MF): GO:0003674 (molecular function), GO:0003824 (catalytic activity), GO:0016829 (lyase activity), GO:0016835 (carbon-oxygen lyase activity), GO:0016836 (hydro-lyase activity)
Biological Process (BP): GO:0008150 (biological process), GO:0008152 (metabolic process), GO:0009987 (cellular process), GO:0009058 (biosynthetic process), GO:0044237 (cellular metabolic process), GO:0019748 (secondary metabolic process), GO:0071704 (organic substance metabolic process), GO:0044550 (secondary metabolite biosynthetic process), GO:0044249 (cellular biosynthetic process), GO:0009404 (toxin metabolic process), GO:0006725 (cellular aromatic compound metabolic process), GO:1901360 (organic cyclic compound metabolic process), GO:1901576 (organic substance biosynthetic process), GO:0046483 (heterocycle metabolic process), GO:0009698 (phenylpropanoid metabolic process), GO:1901362 (organic cyclic compound biosynthetic process), GO:0043385 (mycotoxin metabolic process), GO:0009403 (toxin biosynthetic process), GO:0009311 (oligosaccharide metabolic process), GO:0019438 (aromatic compound biosynthetic process), GO:0018130 (heterocycle biosynthetic process), GO:0009699 (phenylpropanoid biosynthetic process)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005737 (cytoplasm), GO:0005829 (cytosol), GO:0005622 (intracellular anatomical structure)
Protein: Ribonuclease VapC5 (RNase VapC5) (EC 3.1.-.-) (Toxin VapC5) (P96917)
Organism: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Function: Probable toxic component of a type II toxin-antitoxin (TA) system. The cognate antitoxin is VapB5. Has limited RNase activity on substrates; activity is seen with a VapC5-VapB5 complex.
Subcellular location: Secreted. Note=Following 6 weeks of nutrient starvation. {ECO:0000269|PubMed:23345537}.
Sequence: MSTTPAAGVLDTSVFIATESGRQLDEALIPDRVATTVVTLAELRVGVLAAATTDIRAQRLATLESVADMETLPVDDDAARMWARLRIHLAESGRRVRINDLWIAAVAASRALPVITQDDDFAALDGAASVEIIRV
InterPro domains: - IPR002716: PIN domain (domain) [9-125]
- IPR022907: VapC family (family) [8-131]
- IPR050556: Type II toxin-antitoxin system RNase (family) [8-128]
- IPR029060: PIN-like domain superfamily (homologous_superfamily) [9-126]
Interaction partners: - Putative antitoxin VapB5
- Antitoxin VapB2
- Ribonuclease VapC30
- Antitoxin VapB30
- Ribonuclease VapC2
- Ribonuclease VapC15
- Antitoxin VapB4
- Antitoxin VapB15
Gene Ontology annotations:
Molecular Function (MF): GO:0003674 (molecular function), GO:0140313 (molecular sequestering activity), GO:0097351 (toxin sequestering activity)
Biological Process (BP): GO:0008150 (biological process), GO:0044419 (biological process involved in interspecies interaction between organisms), GO:0035821 (modulation of process of another organism), GO:0044403 (biological process involved in symbiotic interaction), GO:0051701 (biological process involved in interaction with host), GO:0044003 (modulation by symbiont of host process)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0071944 (cell periphery), GO:0016020 (membrane), GO:0005886 (plasma membrane)
Protein: Serine/threonine-protein kinase mos (EC 2.7.11.1) (pp39-mos) (P12965)
Organism: Xenopus laevis (African clawed frog)
Function: Not known
Subcellular location: Cytoplasm {ECO:0000250|UniProtKB:P00540}.
Sequence: MPSPIPVERFLPRDLSPSIDLRPCSSPLELSHRKLPGGLPACSGRPRLLPPRLAWCSIDWEQVLLLEPLGSGGFGSVYRATYRGETVALKKVKRSTKNSLASRQSFWAELNAARLRHPHVVRVVAASASCPGDPGCPGTIIMEYTGTGTLHQRIYGRSPPLGAEICMRYARHVADGLRFLHRDGVVHLDLKPANVLLAPGDLCKIGDFGCSQRLREGDEAAGGEPCCTQLRHVGGTYTHRAPELLKGEPVTAKADIYSFAITLWQMVSRELPYTGDRQCVLYAVVAYDLRPEMGPLFSHTEEGRAARTIVQSCWAARPQERPNAEQLLERLEQECAMCTGGPPSCSPESNAPPPLGTGL
InterPro domains: - IPR011009: Protein kinase-like domain superfamily (homologous_superfamily) [48-332]
- IPR008271: Serine/threonine-protein kinase, active site (active_site) [185-197]
- IPR017441: Protein kinase, ATP binding site (binding_site) [69-90]
- IPR000719: Protein kinase domain (domain) [63-336]
- IPR051681: Serine/Threonine Kinases and Pseudokinases (family) [56-333]
Gene Ontology annotations:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0005515 (protein binding)
Biological Process (BP): GO:0008150 (biological process), GO:0065007 (biological regulation), GO:0050789 (regulation of biological process), GO:0048519 (negative regulation of biological process), GO:0048583 (regulation of response to stimulus), GO:0023051 (regulation of signaling), GO:0023057 (negative regulation of signaling), GO:0048523 (negative regulation of cellular process), GO:0048585 (negative regulation of response to stimulus), GO:0050794 (regulation of cellular process), GO:0009968 (negative regulation of signal transduction), GO:0010648 (negative regulation of cell communication), GO:0010646 (regulation of cell communication), GO:0009966 (regulation of signal transduction), GO:0030111 (regulation of Wnt signaling pathway), GO:0030178 (negative regulation of Wnt signaling pathway)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005737 (cytoplasm), GO:0005829 (cytosol), GO:0005622 (intracellular anatomical structure)
Protein: Ras-related protein Rab-7b (Q6DUB4)
Organism: Paramecium octaurelia
Function: Not known
Subcellular location: Cytoplasm, cytoskeleton {ECO:0000269|PubMed:22030555}. Note=Localizes to the oral apparatus where it is associated with microtubules. {ECO:0000269|PubMed:22030555}.
Sequence: MASQKKQLFKIIILGDSGVGKTSLMNQYVNARFTQQYRATVGADFMAKEVMIDDRMVTLQIWDTAGQERFQSLGGAFYRGADCCVLVYDITNPKSFDSLDSWRDEFLMQGQPKDPEHFPFVVLGNKLDKATERKVQESKSQQWCKSHGNIQFFEVSAKDATNIEQAFQDIAKAAASQEKDEEIFFPTTVTLTKQDPKKQTKQGGCC
InterPro domains: - IPR001806: Small GTPase (family) [3-206]
- IPR027417: P-loop containing nucleoside triphosphate hydrolase (homologous_superfamily) [1-187]
- IPR005225: Small GTP-binding domain (domain) [8-169]
Gene Ontology annotations:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0005515 (protein binding)
Biological Process (BP): GO:0008150 (biological process), GO:0009987 (cellular process), GO:0065007 (biological regulation), GO:0042592 (homeostatic process), GO:0048878 (chemical homeostasis), GO:0071840 (cellular component organization or biogenesis), GO:0019725 (cellular homeostasis), GO:0006885 (regulation of pH), GO:0050801 (monoatomic ion homeostasis), GO:0055082 (intracellular chemical homeostasis), GO:0016043 (cellular component organization), GO:0030641 (regulation of cellular pH), GO:0055080 (monoatomic cation homeostasis), GO:0006873 (intracellular monoatomic ion homeostasis), GO:0006996 (organelle organization), GO:0051453 (regulation of intracellular pH), GO:0051452 (intracellular pH reduction), GO:0090382 (phagosome maturation), GO:0030003 (intracellular monoatomic cation homeostasis)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0016020 (membrane), GO:0005737 (cytoplasm), GO:0031090 (organelle membrane), GO:0031410 (cytoplasmic vesicle), GO:0043229 (intracellular organelle), GO:0043227 (membrane-bounded organelle), GO:0030139 (endocytic vesicle), GO:0043231 (intracellular membrane-bounded organelle), GO:0098588 (bounding membrane of organelle), GO:0031982 (vesicle), GO:0012506 (vesicle membrane), GO:0030659 (cytoplasmic vesicle membrane), GO:0045335 (phagocytic vesicle), GO:0030666 (endocytic vesicle membrane), GO:0097708 (intracellular vesicle), GO:0030670 (phagocytic vesicle membrane)