Protein: RRM domain-containing protein (B6JV57)
Organism: Schizosaccharomyces japonicus (strain yFS275 / FY16936) (Fission yeast)
Sequence: MAKKVKSVEKKSKSSKAVAPKSGAVEKTSKNKEIAKKAAKAALKEKKEKSSKKSKKSKKEESESSESEESESEKEEDVKMEESSSSSESSSSESESSDSESSESEAEKKEEAKEAESSSSESESSDSESESEDAKKETKTESKKEESDSDSSSDSDSDDSSDSSSSDSDSDDSSSSESSDKKRKADDESEEQKPQKAAKSESGESCTVFVGRLSWNVDDEWLGKEFEEYGTVVNARVIMDGQSGRSKGFGYVDFDSPEAAKAAVAVNGQKEIDGRMVNLDISTPRPAQNNNGFAQQRASNFGDKQSPPSDTVFIGNLSFNATEDDVRNAFSSCGEIQSVRLPTDMNSGRPKGFGYVTFDSIDAAKQCVEMNGHFIAGRPCRLDFSTPRTGNAGGRGGFGGRGGFGGRGGGRGRGGFGGRGGFGGRGRGGARSGGFNRSTEFSGNKITFD
InterPro domains: - IPR052462: SRA stem-loop-interacting RNA-binding protein/Glycine-rich RNA-binding-like (family) [304-434]
- IPR000504: RNA recognition motif domain (domain) [206-387]
- IPR035979: RNA-binding domain superfamily (homologous_superfamily) [199-417]
- IPR012677: Nucleotide-binding alpha-beta plait domain superfamily (homologous_superfamily) [132-443]
Interaction partners: - rRNA 2'-O-methyltransferase fibrillarin
- Nucleolar protein 56
- PinX1-related protein 1
- RNA helicase
- 18S rRNA factor 2
- GTPase Grn1
- type I protein arginine methyltransferase
- H/ACA ribonucleoprotein complex subunit
- Nucleolar GTP-binding protein 1
- Nucleolar protein 58
Gene Ontology annotations:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0005515 (protein binding)
Biological Process (BP): GO:0008150 (biological process), GO:0008152 (metabolic process), GO:0009987 (cellular process), GO:0044237 (cellular metabolic process), GO:0006807 (nitrogen compound metabolic process), GO:0071840 (cellular component organization or biogenesis), GO:0071704 (organic substance metabolic process), GO:0044238 (primary metabolic process), GO:1901360 (organic cyclic compound metabolic process), GO:0044085 (cellular component biogenesis), GO:0006139 (nucleobase-containing compound metabolic process), GO:0046483 (heterocycle metabolic process), GO:0016043 (cellular component organization), GO:0006725 (cellular aromatic compound metabolic process), GO:0034641 (cellular nitrogen compound metabolic process), GO:0043170 (macromolecule metabolic process), GO:0090304 (nucleic acid metabolic process), GO:0022613 (ribonucleoprotein complex biogenesis), GO:0043933 (protein-containing complex organization), GO:0006996 (organelle organization), GO:0010467 (gene expression), GO:0022607 (cellular component assembly), GO:0070925 (organelle assembly), GO:0042254 (ribosome biogenesis), GO:0042274 (ribosomal small subunit biogenesis), GO:0016070 (RNA metabolic process), GO:0022618 (ribonucleoprotein complex assembly), GO:0065003 (protein-containing complex assembly), GO:0006396 (RNA processing), GO:0071826 (ribonucleoprotein complex subunit organization), GO:0000028 (ribosomal small subunit assembly), GO:0042255 (ribosome assembly), GO:0034470 (ncRNA processing), GO:0140694 (non-membrane-bounded organelle assembly), GO:0006364 (rRNA processing), GO:0034660 (ncRNA metabolic process), GO:0016072 (rRNA metabolic process)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0031974 (membrane-enclosed lumen), GO:0043229 (intracellular organelle), GO:0043233 (organelle lumen), GO:0043227 (membrane-bounded organelle), GO:0043228 (non-membrane-bounded organelle), GO:0070013 (intracellular organelle lumen), GO:0043232 (intracellular non-membrane-bounded organelle), GO:0043231 (intracellular membrane-bounded organelle), GO:0031981 (nuclear lumen), GO:0005730 (nucleolus), GO:0005634 (nucleus)