wanglab/bioreason-pro-rl-reasoning-data huggingface dataset:
Protein: Ubiquitin carboxyl-terminal hydrolase family protein (Q9FM53)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Not known
Sequence: MMMALTQLVPSSPEKLFCFSSFFLPSIPLEIRRSNVTTKTSSKKLGSLSLNISCSAHKIVRSPSLDRHVVKQNRVRFVQKLNTLLLSKPKHYIPIEILYKCRSYLCIENPLAILSMIRRYPTIFELFTTPTPHLPMNATKPLSQLCVRLTSAASSLAMQELNLKSEISDKLATKLQKLLMLSSHRRLLLSKLVHIAPDFGFPPNFRSRLCNDYPDKFKTVDTSYGRALELVSSDPELANQMPSPEVDRGLIVDRPLKFKRLNLRRGLNLKRRHQGFLIKFRESPDVCPYKMSSDYLASESIEAEKRACAVVREVLGLTVEKRTLIDHLTHFRKEFSLPNKLRDLIVRHPELFYVSIKGMRDSVFLVEAYNDNGDLLDKDERLVIRERLIDLIQEGKRIRRERRRKGATLGDKSVEEKRKDDETIDDYDSDLDDEYEDGFENLFDSEDLGVEYHFDEEDDDDEAGVNGESVEYWSRKLSSSGSSSDEANSAVESW
InterPro domains: - IPR021099: Plant organelle RNA recognition domain (domain) [60-397]
- IPR045040: PORR family (family) [56-430]
Interaction partners: - Uncharacterized protein At3g14900
- Embryo defective 1703
- Pentatricopeptide repeat-containing protein At5g50280, chloroplastic
- Small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial
- Large ribosomal subunit protein uL13x
- Telomere repeat-binding factor 5
- DNA-binding protein S1FA3
- Chitinase-like protein 2
Gene Ontology annotations:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0097159 (organic cyclic compound binding), GO:1901363 (heterocyclic compound binding), GO:0005515 (protein binding), GO:0003676 (nucleic acid binding), GO:0003723 (RNA binding), GO:0003729 (mRNA binding)
Biological Process (BP): GO:0008150 (biological process), GO:0008152 (metabolic process), GO:0009987 (cellular process), GO:0044237 (cellular metabolic process), GO:0071704 (organic substance metabolic process), GO:0044238 (primary metabolic process), GO:0006807 (nitrogen compound metabolic process), GO:0006725 (cellular aromatic compound metabolic process), GO:0034641 (cellular nitrogen compound metabolic process), GO:1901360 (organic cyclic compound metabolic process), GO:0006139 (nucleobase-containing compound metabolic process), GO:0043170 (macromolecule metabolic process), GO:0046483 (heterocycle metabolic process), GO:0090304 (nucleic acid metabolic process), GO:0010467 (gene expression), GO:0016070 (RNA metabolic process), GO:0006396 (RNA processing), GO:0008380 (RNA splicing), GO:0000375 (RNA splicing, via transesterification reactions), GO:0000377 (RNA splicing, via transesterification reactions with bulged adenosine as nucleophile), GO:0000373 (Group II intron splicing)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0005737 (cytoplasm), GO:0043229 (intracellular organelle), GO:0043227 (membrane-bounded organelle), GO:0009536 (plastid), GO:0009507 (chloroplast), GO:0043231 (intracellular membrane-bounded organelle)
Protein: Insulinoma-associated protein 1a (Insulinoma-associated 1-like protein a) (Zinc finger protein IA-1a) (Q6P0F9)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Function: May act as a transcriptional regulator. May play a role in neurogenesis and neuroendocrine cell differentiation during embryonic development (By similarity).
Subcellular location: Nucleus {ECO:0000250|UniProtKB:Q63ZV0}.
Sequence: MPRGFLVKRNKKATPVSYRVRSEEDEQGAFVAQDVPCARRPVSPVQFGNPETVYRAMYSPTRPVSREHERACLERRFNLGSPISAESFPAAPNCSDQAPVDLKIGTSNSNRTGTTVTTKRPASDTERKGKPASKKAKAMRKLQFEDEMTTSPVLGLKIKEGPVEQKPRSQCASGDKPLGEFVCQLCREAYADPFSLAQHKCSRIVRIEYRCPECDKLFSCPANLASHRRWHKPKQSAESNKTPAPEKEETSSDRDTPSPGLSESGSEDGLYDCQHCGKKFKRQAYLKKHVTAHHDAPEKPQSHAPLNLSASECHLCPVCGENFPSRMSQERHIRLQHSAQVYPCKYCPAMFYSSPGLTRHINKCHPSENRQVILLQMPVRPAC
InterPro domains: - IPR013087: Zinc finger C2H2-type (domain) [181-370]
- IPR036236: Zinc finger C2H2 superfamily (homologous_superfamily) [181-361]
- IPR042972: Insulinoma-associated protein 1/2 (family) [118-383]
Interaction partners: - Achaete-scute homolog 1a
- Paired box protein Pax-6
Gene Ontology annotations:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0003682 (chromatin binding)
Biological Process (BP): GO:0008150 (biological process), GO:0032502 (developmental process), GO:0009987 (cellular process), GO:0032501 (multicellular organismal process), GO:0048869 (cellular developmental process), GO:0048856 (anatomical structure development), GO:0007275 (multicellular organism development), GO:0009653 (anatomical structure morphogenesis), GO:0048646 (anatomical structure formation involved in morphogenesis), GO:0001525 (angiogenesis), GO:0035295 (tube development), GO:0009888 (tissue development), GO:0001568 (blood vessel development), GO:0048468 (cell development), GO:0030154 (cell differentiation), GO:0048731 (system development), GO:0035239 (tube morphogenesis), GO:0048514 (blood vessel morphogenesis), GO:0002064 (epithelial cell development), GO:0001944 (vasculature development), GO:0072359 (circulatory system development), GO:0060856 (establishment of blood-brain barrier), GO:0007417 (central nervous system development), GO:0060429 (epithelium development), GO:0002040 (sprouting angiogenesis), GO:0030855 (epithelial cell differentiation), GO:0045446 (endothelial cell differentiation), GO:0001885 (endothelial cell development), GO:0003158 (endothelium development), GO:0061028 (establishment of endothelial barrier)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0043229 (intracellular organelle), GO:0043227 (membrane-bounded organelle), GO:0043231 (intracellular membrane-bounded organelle), GO:0005634 (nucleus)
Protein: Sphingolipid delta(4)-desaturase DES1-like (EC 1.14.19.17) (Q9ZPH4)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Sphingolipid-delta-4-desaturase required for the biosynthesis of delta-4-unsaturated sphingolipids and derivatives. May be required for the biosynthesis of glucosylceramides.
Subcellular location: Endoplasmic reticulum membrane {ECO:0000305}; Multi-pass membrane protein {ECO:0000305}.
Sequence: MGKGGREKISSNEEEREGVMATDFFWSYTDEPHASRRRQILSCYPQIRQLFGPDPWAFLKITLVVILQLSTAAILHNSGWLKILSIAYFFGSFLNHNLFLAIHELSHNLAFSTPVYNRCLGIFANLPIGVPMSVTFQKYHLEHHRFQGVDGIDMDVPTYTEAHLVTNIFAKTIWVFLQLFFYALRPIFIKPKPPGYWEFINFLIQIVLDVSVVLFFGWRSFAYLILSTFVGGGMHPMAGHFISEHYVFNPNQETYSYYGPLNLLTWSVGYHNEHHDFPRIPGNKLHLVKEIAGEYYEGLESYKSWSQVIYMYIMDTTVGPYSRMKRKLSKSD
InterPro domains: - IPR011388: Sphingolipid delta4-desaturase (family) [1-332]
- IPR005804: Fatty acid desaturase domain (domain) [79-297]
- IPR013866: Sphingolipid delta4-desaturase, N-terminal (domain) [19-57]
Interaction partners: - 3-dehydrosphinganine reductase TSC10A
- 3-dehydrosphinganine reductase TSC10B
- ceramide glucosyltransferase
- Alkaline ceramidase
- Ceramide kinase
- Sphingosine kinase 2
- Sphingosine kinase 1
- Neutral ceramidase 2
- Neutral ceramidase 3
- Neutral ceramidase 1
Gene Ontology annotations:
Molecular Function (MF): GO:0003674 (molecular function), GO:0003824 (catalytic activity), GO:0016491 (oxidoreductase activity), GO:0016705 (oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen)
Biological Process (BP): GO:0008150 (biological process), GO:0008152 (metabolic process), GO:0009987 (cellular process), GO:0009058 (biosynthetic process), GO:0044237 (cellular metabolic process), GO:0071704 (organic substance metabolic process), GO:0044238 (primary metabolic process), GO:0006807 (nitrogen compound metabolic process), GO:0044255 (cellular lipid metabolic process), GO:0044249 (cellular biosynthetic process), GO:1901576 (organic substance biosynthetic process), GO:1901564 (organonitrogen compound metabolic process), GO:0006629 (lipid metabolic process), GO:1901566 (organonitrogen compound biosynthetic process), GO:0006665 (sphingolipid metabolic process), GO:0046467 (membrane lipid biosynthetic process), GO:0008610 (lipid biosynthetic process), GO:0006643 (membrane lipid metabolic process), GO:0030148 (sphingolipid biosynthetic process)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0005737 (cytoplasm), GO:0012505 (endomembrane system), GO:0043229 (intracellular organelle), GO:0005783 (endoplasmic reticulum), GO:0043227 (membrane-bounded organelle), GO:0043231 (intracellular membrane-bounded organelle)
Protein: Malate dehydrogenase 2, cytoplasmic (EC 1.1.1.37) (Cytosolic NAD-dependent malate dehydrogenase 2) (cNAD-MDH2) (Cytosolic malate dehydrogenase 2) (Cytosolic MDH2) (P57106)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Catalyzes a reversible NAD-dependent dehydrogenase reaction involved in central metabolism and redox homeostasis between organelle compartments.
Subcellular location: Cytoplasm {ECO:0000250}.
Sequence: MAKEPVRVLVTGAAGQIGYALVPMIARGIMLGADQPVILHMLDIPFAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNVAVMVGGFPRKEGMERKDVMSKNVSIYKSQASALEKHAAPNCKVLVVANPANTNALILKEFAPSIPEKNITCLTRLDHNRALGQVSERLSVPVSDVKNVIIWGNHSSTQYPDVNHATVKTSVGEKPVRELVKNDEWLNGEFISTVQQRGAAIIKARKLSSALSAASSACDHIRDWVVGTPEGTFVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLPIDDASRKKMDLTAEELKEEKDLAYSCLS
InterPro domains: - IPR001557: L-lactate/malate dehydrogenase (family) [2-329]
- IPR036291: NAD(P)-binding domain superfamily (homologous_superfamily) [4-154]
- IPR001236: Lactate/malate dehydrogenase, N-terminal (domain) [6-153]
- IPR022383: Lactate/malate dehydrogenase, C-terminal (domain) [157-326]
- IPR011274: Malate dehydrogenase, NAD-dependent, cytosolic (family) [4-329]
- IPR015955: Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal (homologous_superfamily) [156-332]
- IPR001252: Malate dehydrogenase, active site (active_site) [156-168]
- IPR010945: Malate dehydrogenase, type 2 (family) [3-330]
Interaction partners: - Fumarate hydratase 1, mitochondrial
- Malate synthase
- Citrate synthase 3, peroxisomal
- Citrate synthase 2, peroxisomal
- NAD-dependent malic enzyme 2, mitochondrial
- Citrate synthase 4, mitochondrial
- Citrate synthase 1, peroxisomal
- Citrate synthase 5, mitochondrial
- NAD-dependent malic enzyme 1, mitochondrial
- Fumarate hydratase 2
Gene Ontology annotations:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0097159 (organic cyclic compound binding), GO:1901363 (heterocyclic compound binding), GO:0005515 (protein binding), GO:0003676 (nucleic acid binding), GO:0003723 (RNA binding), GO:0003729 (mRNA binding)
Biological Process (BP): GO:0008150 (biological process), GO:0050896 (response to stimulus), GO:0042221 (response to chemical), GO:0010035 (response to inorganic substance), GO:0010038 (response to metal ion), GO:0010043 (response to zinc ion)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0009532 (plastid stroma), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0016020 (membrane), GO:0030054 (cell junction), GO:0005829 (cytosol), GO:0055044 (symplast), GO:0005737 (cytoplasm), GO:0071944 (cell periphery), GO:0005576 (extracellular region), GO:0005773 (vacuole), GO:0048046 (apoplast), GO:0043229 (intracellular organelle), GO:0009506 (plasmodesma), GO:0070161 (anchoring junction), GO:0043227 (membrane-bounded organelle), GO:0005886 (plasma membrane), GO:0009536 (plastid), GO:0009570 (chloroplast stroma), GO:0000325 (plant-type vacuole), GO:0009507 (chloroplast), GO:0043231 (intracellular membrane-bounded organelle), GO:0005911 (cell-cell junction), GO:0005634 (nucleus)
Protein: Mycinamicin VI 2''-O-methyltransferase (EC 2.1.1.238) (Mycinamicin biosynthesis protein E) (Q83WF2)
Organism: Micromonospora griseorubida
Function: O-methyltransferase that catalyzes the conversion of mycinamicin VI to mycinamicin III in the biosynthesis of mycinamicin, a 16-membered macrolide antibiotic.
Sequence: MTAQTEFDEATVQDVVRLAGGHDSELRELTQKYDPAMISRLLVAEILSRCPPPSNDTPVLVELAIVHGSERFRHFLRVVRDSPIRPVGADEGFVGMLVEYELTELLRELFGVTHERPAGVRGTKLFPYLTDDEEAVEQIGTYLLAAQQGTEAVLAGCGSRKPDLSELSSRYFTPKFGFLHWFTPHYDRHFRDYRNQQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSHVDELRIRTIQGDQNDAEFLDRIARRYGPFDIVIDDGSHINAHVRTSFAALFPHVRPGGLYVIEDMWTAYWPGFGGQADPQECSGTSLGLLKSLIDAIQHQELPSDPNRSPGYVDRNIVGLHVYHNVAFVEKGRNDEGGIPTWIPRDFESLVQASSGGAT
InterPro domains: - IPR029063: S-adenosyl-L-methionine-dependent methyltransferase superfamily (homologous_superfamily) [160-382]
- IPR040800: Methyltransferase MycE, N-terminal (domain) [13-121]
Gene Ontology annotations:
Molecular Function (MF): GO:0003674 (molecular function), GO:0003824 (catalytic activity), GO:0016740 (transferase activity), GO:0016741 (transferase activity, transferring one-carbon groups), GO:0008168 (methyltransferase activity), GO:0008757 (S-adenosylmethionine-dependent methyltransferase activity)
Biological Process (BP): GO:0008150 (biological process), GO:0008152 (metabolic process), GO:0009987 (cellular process), GO:0016999 (antibiotic metabolic process), GO:0032259 (methylation), GO:0009058 (biosynthetic process), GO:0044237 (cellular metabolic process), GO:0017000 (antibiotic biosynthetic process), GO:0044249 (cellular biosynthetic process)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005737 (cytoplasm), GO:0005622 (intracellular anatomical structure)
Protein: RNA polymerase sigma factor FliA (RNA polymerase sigma factor for flagellar operon) (Sigma F) (Sigma-28) (A0A0F6B2T8)
Organism: Salmonella typhimurium (strain 14028s / SGSC 2262)
Function: Not known
Subcellular location: Cytoplasm {ECO:0000256|HAMAP-Rule:MF_00962}.
Sequence: MNSLYTAEGVMDKHSLWQRYVPLVRHEALRLQVRLPASVELDDLLQAGGIGLLNAVDRYDALQGTAFTTYAVQRIRGAMLDELRSRDWVPRSVRRNAREVAQAMGQLEQELGRNATETEVAERLGIPVAEYRQMLLDTNNSQLFSYDEWREEHGDSIELVTEEHQQENPLHQLLEGDLRQRVMDAIESLPEREQLVLTLYYQEELNLKEIGAVLEVGESRVSQLHSQAIKRLRTKLGKL
InterPro domains: - IPR007627: RNA polymerase sigma-70 region 2 (domain) [16-88]
- IPR028617: RNA polymerase sigma factor FliA (family) [5-239]
- IPR013324: RNA polymerase sigma factor, region 3/4-like (homologous_superfamily) [89-237]
- IPR014284: RNA polymerase sigma-70-like domain (domain) [15-236]
- IPR013325: RNA polymerase sigma factor, region 2 (homologous_superfamily) [5-88]
- IPR000943: RNA polymerase sigma-70 (domain) [1-238]
- IPR007630: RNA polymerase sigma-70 region 4 (domain) [185-233]
- IPR007624: RNA polymerase sigma-70 region 3 (domain) [97-167]
- IPR012845: RNA polymerase sigma factor, FliA/WhiG (family) [16-236]
Gene Ontology annotations:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0005515 (protein binding)
Biological Process (BP): GO:0008150 (biological process), GO:0050789 (regulation of biological process), GO:0065007 (biological regulation), GO:0048518 (positive regulation of biological process), GO:0009893 (positive regulation of metabolic process), GO:0019222 (regulation of metabolic process), GO:0010604 (positive regulation of macromolecule metabolic process), GO:0060255 (regulation of macromolecule metabolic process), GO:0010628 (positive regulation of gene expression), GO:0010468 (regulation of gene expression)
Cellular Component (CC): GO:0005575 (cellular component), GO:0032991 (protein-containing complex), GO:0110165 (cellular anatomical entity), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0016020 (membrane), GO:0140513 (nuclear protein-containing complex), GO:0005737 (cytoplasm), GO:0005667 (transcription regulator complex), GO:0098796 (membrane protein complex), GO:0098797 (plasma membrane protein complex), GO:0090575 (RNA polymerase II transcription regulator complex), GO:0034357 (photosynthetic membrane), GO:0043229 (intracellular organelle), GO:0043227 (membrane-bounded organelle), GO:0005886 (plasma membrane), GO:0000428 (DNA-directed RNA polymerase complex), GO:0043231 (intracellular membrane-bounded organelle), GO:0005675 (transcription factor TFIIH holo complex), GO:0061695 (transferase complex, transferring phosphorus-containing groups), GO:0009535 (chloroplast thylakoid membrane), GO:0009534 (chloroplast thylakoid)
Protein: Ribosomal Protein, Small subunit (A8WIR1)
Organism: Caenorhabditis elegans
Function: Not known
Sequence: MLKVIVRFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKASVISPRLNIRLNDLEKYTNTLLPSRQFGYLILTTSAGIMDHEEARRKHLGGKILGFFF
InterPro domains: - IPR047863: Small ribosomal subunit protein uS8, conserved site (conserved_site) [71-88]
- IPR035987: Small ribosomal subunit protein uS8 superfamily (homologous_superfamily) [3-101]
- IPR000630: Small ribosomal subunit protein uS8 (family) [3-100]
Gene Ontology annotations:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0005515 (protein binding)
Biological Process (BP): GO:0008150 (biological process), GO:0032501 (multicellular organismal process), GO:0008340 (determination of adult lifespan)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0005737 (cytoplasm), GO:0043229 (intracellular organelle), GO:0005739 (mitochondrion), GO:0043227 (membrane-bounded organelle), GO:0043231 (intracellular membrane-bounded organelle)
Protein: Diglucosylglycerate octanoyltransferase (DGG octanoyltransferase) (EC 2.3.1.273) (K5BJH8)
Organism: Mycolicibacterium hassiacum (strain DSM 44199 / CIP 105218 / JCM 12690 / 3849) (Mycobacterium hassiacum)
Function: Sugar octanoyltransferase likely involved in the biosynthesis of mycobacterial methylglucose lipopolysaccharide (MGLP). Catalyzes the transfer of an octanoyl group from octanoyl-CoA to the C6 OH of the second glucose in diglucosylglycerate (DGG). Can also use hexanoyl-CoA as acyl donor in vitro. DGG is the preferred acceptor, but to a lesser extent, GG (glucosylglycerate) can be used as substrate. DGG and GG are the two earliest intermediates in MGLP biosynthesis.
Sequence: MSGRRPTLLVFCDSLSYYGPRGGLPADDPRIWPNIVASQLDWDVELIGRVGWTSRDVWWAATQDPRAWAALPRAGAVIFATGGMDSLPSPLPTALRELIRYIRPPWLRRRVRDLYGWLQPRLSPVSRNALPPHLTAEYLEMTRGAIDFNRPGIPVVAALPSVHIADSYGRAHHGREATARAITEWARQHGVVLVDLKAAVADQVLNGRGNPDGIHWNFEAHQAVAELMLKALAEAGVPCR
InterPro domains: - IPR013830: SGNH hydrolase-type esterase domain (domain) [13-223]
- IPR050023: Diglucosylglycerate octanoyltransferase (family) [11-232]
- IPR036514: SGNH hydrolase superfamily (homologous_superfamily) [2-234]
Interaction partners: - EDD, DegV family domain protein
- Histidine phosphatase super family protein
- Oligomerisation domain protein
- Probable nicotinate-nucleotide adenylyltransferase
- Bacterial transferase hexapeptide family protein
- Glycosyl hydrolase 57 family protein
- UbiE/COQ5 methyltransferase family protein
- Alpha/beta hydrolase family protein
- Uncharacterized protein
- Glycosyl transferases group 1 family protein
Gene Ontology annotations:
Molecular Function (MF): GO:0003674 (molecular function), GO:0003824 (catalytic activity), GO:0016740 (transferase activity), GO:0016746 (acyltransferase activity), GO:0016747 (acyltransferase activity, transferring groups other than amino-acyl groups), GO:0008374 (O-acyltransferase activity)
Biological Process (BP): GO:0008150 (biological process), GO:0009987 (cellular process), GO:0071840 (cellular component organization or biogenesis), GO:0016043 (cellular component organization), GO:0044085 (cellular component biogenesis), GO:0043933 (protein-containing complex organization), GO:0022607 (cellular component assembly), GO:0065003 (protein-containing complex assembly), GO:0051259 (protein complex oligomerization), GO:0051262 (protein tetramerization)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0016020 (membrane)
Protein: Glutamate racemase (EC 5.1.1.3) (Q3XZW8)
Organism: Enterococcus faecium (strain ATCC BAA-472 / TX0016 / DO)
Function: Not known
Sequence: MKKRMIRLTDNRPIGFIDSGVGGLTVVKEALKQLPNENILFVGDTARCPYGPRPAEQVIQYTWEMTDYLVEQGIKMLVIACNTATAVALEEIKAALSIPVIGVILPGTRAAVKKTQNKQVGIIGTIGTVKSQAYEKALKEKVPELTVTSLACPKFVSVVESNEYHSSVAKKIVAETLAPLTTKKIDTLILGCTHYPLLRPIIQNVMGENVQLIDSGAETVGEVSMLLDYFNLSNSPQNGRTLCQFYTTGSAKLFEEIAEDWLGIGHLNVEHIELGGK
InterPro domains: - IPR033134: Asp/Glu racemase, active site 2 (active_site) [188-198]
- IPR004391: Glutamate racemase (family) [12-265]
- IPR001920: Asp/Glu racemase (homologous_superfamily) [13-272]
- IPR018187: Asp/Glu racemase, active site 1 (active_site) [78-86]
- IPR015942: Asp/Glu/hydantoin racemase (family) [29-220]
Gene Ontology annotations:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0005515 (protein binding), GO:0042802 (identical protein binding)
Biological Process (BP): GO:0008150 (biological process), GO:0008152 (metabolic process), GO:0009987 (cellular process), GO:0071840 (cellular component organization or biogenesis), GO:0009058 (biosynthetic process), GO:0044237 (cellular metabolic process), GO:0071704 (organic substance metabolic process), GO:0071554 (cell wall organization or biogenesis), GO:0006807 (nitrogen compound metabolic process), GO:0044249 (cellular biosynthetic process), GO:0044036 (cell wall macromolecule metabolic process), GO:0044085 (cellular component biogenesis), GO:1901564 (organonitrogen compound metabolic process), GO:1901576 (organic substance biosynthetic process), GO:0044260 (cellular macromolecule metabolic process), GO:0042546 (cell wall biogenesis), GO:0043170 (macromolecule metabolic process), GO:1901135 (carbohydrate derivative metabolic process), GO:1901566 (organonitrogen compound biosynthetic process), GO:0009059 (macromolecule biosynthetic process), GO:0009273 (peptidoglycan-based cell wall biogenesis), GO:0034645 (cellular macromolecule biosynthetic process), GO:1901137 (carbohydrate derivative biosynthetic process), GO:0044038 (cell wall macromolecule biosynthetic process), GO:0070589 (cellular component macromolecule biosynthetic process), GO:0006022 (aminoglycan metabolic process), GO:0030203 (glycosaminoglycan metabolic process), GO:0006023 (aminoglycan biosynthetic process), GO:0009252 (peptidoglycan biosynthetic process), GO:0006024 (glycosaminoglycan biosynthetic process), GO:0000270 (peptidoglycan metabolic process)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0071944 (cell periphery), GO:0030312 (external encapsulating structure), GO:0005618 (cell wall), GO:0009274 (peptidoglycan-based cell wall)