Protein: ATP-dependent RNA helicase (Q3BQH9)
Organism: Xanthomonas euvesicatoria pv. vesicatoria (strain 85-10) (Xanthomonas campestris pv. vesicatoria)
Function: Not known
Sequence: MSAIDSTLADTLRERRRAVDGAMSRDRGRLLGLWSRWQGKPGNPQVRDAFEQALAASQAQRQARAEQQPAITLDDQLPIAREAERIIALIRNHQVVVIAGETGSGKTTQLPKLCLAAGRGAAGMIGCTQPRRIAARAVAARVADELKTPLGTTVGFQVRFTDRVSDQSRIKFMTDGILLAEIASDRWLSSYDTIIVDEAHERSLNIDFLLGYLKQLLRKRSDLKLIVTSATIDTERFARHFDDAPVISVEGRTFPVEVRYRPLEGDTGDSDDGEHGSGRDGERSVNDAIVAAIDEITRIDPRGDVLMFLPGEREIRDAHQSLERRKYRETEVVPLYARLSAADQDRVFNPGPRRRLVLATNVAETSLTVPRIRYVVDPGLARVKRYSPRQKLDRLHIEPISQASANQRMGRCGRIAEGICYRLYAEADFAARPAFTDPEIRRSSLSGVILRMLQLGLGRIEDFPFLEAPDERALADGWQQLLELGAIDAQRRLTATGRQMARLPVDVKLARMLVAAQQHGCLREMIIIAAFLGIQDPRERPPEAREAADNAHALFADARSEFVGILRLWDAYRQVHEDLTQSKLRDWCNRHFLGFLRMREWRELHRQLRLLCEELGWSEEPANVMLAPLLAGASAPAREDGHSVNRPTRGQLHRAARLAREGKPDPNAAPVQPAPAATNKQAEAAEASARTTERERAAAYQALHRALLAGLPTQIGHRTEKGDYLAARQRRFVPFPGSALARKPPPWILAATLLDTQKVWGMTNAAIEPDWAIAELPHLLARKHFDAHWSRAQGQVVASEQISLFGLVLAPKKPVHFGKIDPAAAHDLFVRQGLVTGEINTRAAFVADNLKVLEQAREEEAKLRRAGIVADEGWQARWYLDRIPAELHSASGLDAWWKTLPPDKRRSLHWSLNDLLPGEGSEADRFPKYFPLGDARLPLHYRFEPGAIDDGVTLEVPLHLLNALDPARLSWLAPGFVADKASALIRSLPKAQRRNYVPAPDFGRAFYEAFSIASADDIRGELARFLTKATGTQVTALDFDEQALDTHLLMNLRLRDDDGKVLAESRDLDGLRARFGERAGQAFAARAGRALAAEGLRDFPSAPIPEQVAGEAGVPAYPALVDQGDNAALHIFADRNDAARAHPRGVRRLLEIALADKIKQARKQLPVSPKTGLLYAAIESQERLRGDLVDAALNAVLADGLGAIRDPGAFAQRRDDAGKRLFGEAMERLKLAESILGAVAELKPLLEAPLMGWARGNLDDMEQQLRALVHAGFLRDTPADALANYPRYLRAMILRTERAKRDPARDQARMLELKPFVDAVEAAAAHGLQDRQEWQALRWDLEELRVSVFAQELGAKSGVSAKKLSQRVAALRS
InterPro domains: - IPR010222: RNA helicase HrpA (family) [46-620]
- IPR011709: DEAD-box helicase, OB fold (domain) [703-778]
- IPR003593: AAA+ ATPase domain (domain) [92-382]
- IPR007502: Helicase-associated domain (domain) [476-566]
- IPR027417: P-loop containing nucleoside triphosphate hydrolase (homologous_superfamily) [38-613]
- IPR014001: Helicase superfamily 1/2, ATP-binding domain (domain) [68-259]
- IPR011545: DEAD/DEAH-box helicase domain (domain) [85-233]
- IPR048333: Helicase associated domain (HA2), winged-helix domain (domain) [479-505]
- IPR024590: RNA helicase HrpA, C-terminal (domain) [793-1369]
- IPR001650: Helicase, C-terminal domain-like (domain) [284-456]
Interaction partners: - 30S ribosomal protein S1
- Ribonuclease D
- Small ribosomal subunit protein uS4
- Small ribosomal subunit protein uS11
- Transcriptional regulator HrpG
- HrpF protein
- Elongation factor G
- Small ribosomal subunit protein uS5
Gene Ontology annotations:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0005515 (protein binding)
Biological Process (BP): GO:0008150 (biological process), GO:0008152 (metabolic process), GO:0009987 (cellular process), GO:0050896 (response to stimulus), GO:0071840 (cellular component organization or biogenesis), GO:0044238 (primary metabolic process), GO:0044237 (cellular metabolic process), GO:0042221 (response to chemical), GO:0071704 (organic substance metabolic process), GO:0006807 (nitrogen compound metabolic process), GO:0006725 (cellular aromatic compound metabolic process), GO:0034641 (cellular nitrogen compound metabolic process), GO:1901360 (organic cyclic compound metabolic process), GO:0044085 (cellular component biogenesis), GO:0006139 (nucleobase-containing compound metabolic process), GO:0043170 (macromolecule metabolic process), GO:0046483 (heterocycle metabolic process), GO:0046677 (response to antibiotic), GO:0090304 (nucleic acid metabolic process), GO:0010467 (gene expression), GO:0022613 (ribonucleoprotein complex biogenesis), GO:0042254 (ribosome biogenesis), GO:0016070 (RNA metabolic process), GO:0006396 (RNA processing), GO:0034470 (ncRNA processing), GO:0006364 (rRNA processing), GO:0034660 (ncRNA metabolic process), GO:0016072 (rRNA metabolic process)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0043229 (intracellular organelle), GO:0043227 (membrane-bounded organelle), GO:0043231 (intracellular membrane-bounded organelle), GO:0005634 (nucleus)