Assertion: proteotypic peptide | /r/CapableOf | predict with 99% confidence
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text: Although the experimental bias is evident in our prediction, we note that (i) 95% of all yeast proteins have at least one proteotypic peptide predicted with 99% confidence, (ii) 2,394 yeast proteins (36% of the proteome) have a high-confidence predicted proteotypic peptide in all experimental designs, (iii) 770 proteins have a proteotypic peptide predicted in one experimental condition only and (iv) 304 proteins have no predicted high-confidence proteotypic peptide for any experimental design, suggesting that these proteins might be more difficult to analyze by current proteomic methods (Supplementary Fig. 3, Supplementary Table 15, Supplementary Table 16 online).