Assertion: antibody's structure | /r/HasProperty | energy
Facets:
Source sentences:
text: The initial structures were energy minimized by the conjugate gradient method (10,000 steps), and heated from 50 to 300 K during 100 ps, and the simulations were continued by 1 ns with NVT ensemble, where protein atoms were initially held fixed whereas non-protein atoms freely moved, gradually releasing the whole system to facilitate a stable simulation over the 1 ns.
text: The 10 representative structures were chosen from the top 10 largest clusters and these representative structures were energy minimized by the conjugate gradient method (10,000 steps) in a rectangular water box.