Spreadsheet: 6db8d253-bfa6-433d-b0fe-e0a22ba78d36
Sheet: Sheet1

SNP | Gene | 3'UTRlength | SNPprop | Signal | GU | DS Lymphoblastoid cell | pearson r | pvalue | BH pv | bonf pv | comments
rs3763406 | FAM62B | 3209 | 0.6650046743533811 | 2 | 0.5 | 0.1018392267 | 0.4175253 | 3.856582e-12 | 9.371494e-10 | 9.371494e-10
rs986475 | NCR3 | 172 | 0.7790697674418605 | 1 | 0.7 | 0.0004079585 | 0.4095014 | 1.047451e-11 | 1.272653e-09 | 2.545306e-09
rs3743955 | ITPRIPL2 | 5561 | 0.9091889947851106 | 9 | 0.59 | 0.0412744285 | 0.378411 | 3.944756e-10 | 3.195252e-08 | 9.585756e-08
rs10793442 | [NAME] | 358 | 0.9245810055865922 | 9 | 0.76 | 0.0001844813 | 0.3417778 | 1.78336e-08 | 1.083391e-06 | 4.333566e-06
rs1060379 | ZNF117 | 3667 | 0.8200163621488955 | 2 | 0.52 | 0.0531391814 | 0.3369021 | 2.857926e-08 | 1.388952e-06 | 6.94476e-06
rs15062 | BCKDHB | 2466 | 0.9209245742092458 | 2 | 0.48 | 0.0325706444 | 0.2825583 | 3.234109e-06 | 0.0001309814 | 0.0007858884
[NAME] | [NAME] | 2310 | 0.8047619047619048 | 6 | 0.59 | 0.0167942512 | 0.2672953 | 8.517116e-06 | 0.0002956656 | 0.002069659
rs9162 | CCDC74A | 268 | 0.7425373134328358 | 8 | 0.48 | 0.0004913068 | 0.2407536 | 3.762498e-05 | 0.001066786 | 0.009142869
rs6777019 | CGGBP1 | 3523 | 0.514902072097644 | 7 | 0.67 | 0.1320635156 | 0.2474732 | 4.230798e-05 | 0.001066786 | 0.01028084
rs4612984 | EXOC5 | 6133 | 0.7120495679112995 | 2 | 0.47 | 0.1748048344 | 0.2489113 | 4.390067e-05 | 0.001066786 | 0.01066786
rs1052873 | PBK | 684 | 0.04093567251461988 | 8 | 0.51 | 0.0749886683 | 0.2378183 | 6.108405e-05 | 0.001349402 | 0.01484342 | missing APA homozygotes
[NAME] | PPM1A | 6606 | 0.9037238873751136 | 6 | 0.69 | 0.009726319 | 0.2221122 | 0.0001305126 | 0.00264288 | 0.03171456
rs1942 | [NAME] | 2875 | 0.5349565217391304 | 9 | 0.49 | 0.103896239 | 0.2280497 | 0.0001509674 | 0.002821929 | 0.03668508
rs1043881 | BCAT1 | 6663 | 0.9842413327330032 | 13 | 0.44 | -0.007239784 | 0.2217723 | 0.0002227303 | 0.003865961
rs29069 | VAPA | 5810 | 0.3015490533562823 | 8 | 0.49 | 0.097079592 | 0.209848 | 0.0004528114 | 0.007335545
rs11920 | [NAME] | 1948 | 0.4430184804928131 | 4 | 0.51 | 0.17627157 | 0.2041888 | 0.0007023069 | 0.010666286
rs9242 | SRGAP2 | 3018 | 0.8714380384360504 | 13 | 0.45 | 0.02584348 | 0.1861795 | 0.0010839746 | 0.015494461
rs1188401 | MATN1 | 2303 | 0.6821537125488494 | 7 | 0.21 | 0.025219132 | 0.1777194 | 0.0026845985 | 0.03624208
rs7305647 | SUDS3 | 3602 | 0.9239311493614658 | 9 | 0.7 | 0.010686671 | 0.1740682 | 0.0030459851 | 0.038956546
rs1156 | CHD6 | 2063 | 0.5831313620940378 | 5 | 0.53 | 0.1559214871 | 0.156541 | 0.005064708 |  |  | missing APA homozygotes
rs702530 | PDE4D | 5625 | 0.5214222222222222 | 3 | 0.37 | 0.0244364629 | 0.1625847 | 0.005244026
rs3745008 | SLC14A2 | 576 | 0.02951388888888889 | 7 | 0.31 | 0.0793786681 | 0.1610447 | 0.005626476
rs1053489 | WDR48 | 1647 | 0.6338797814207651 | 13 | 0.63 | 0.0765404345 | 0.1574011 | 0.006725638
rs1653589 | CAMKK2 | 3007 | 0.3202527435982707 | 10 | 0.56 | 0.069415066 | 0.1540063 | 0.007705113
rs12608564 | ZNF551 | 1513 | 0.5558493060145406 | 8 | 0.55 | 0.0763615853 | 0.153966 | 0.007718747
rs1057403 | BTK | 431 | 0.4431554524361949 | 5 | 0.4 | 0.0029347597 | 0.1455341 | 0.011073442
rs10921309 | TROVE2 | 1582 | 0.1852085967130215 | 7 | 0.37 | 0.1069332006 | 0.1420901 | 0.01189912
[NAME] | VCL | 1987 | 0.7971816809260192 | 11 | 0.52 | 0.0841767982 | 0.1363538 | 0.012662507
rs11948089 | WDR36 | 3619 | 0.500690798563139 | 7 | 0.54 | 0.1380870737 | 0.1375738 | 0.012697475
rs1061686 | NUDT19 | 1839 | 0.9140837411636759 | 2 | 0.35 | 0.0003558767 | 0.139959 | 0.013152449
rs10686 | SEC23IP | 7966 | 0.9893296510168215 | 11 | 0.72 | 0.0042222917 | 0.1304628 | 0.016220465
rs2833955 | C21ORF62 | 3004 | 0.8508655126498003 | 9 | 0.64 | 0.06058355 | 0.1292413 | 0.017056317
rs1061646 | ZNF276 | 2678 | 0.4940253920836445 | 5 | 0.55 | 0.0946651691 | 0.1312682 | 0.019829371
rs506619 | DTNA | 2651 | 0.1169370049038099 | 13 | 0.53 | 0.1543307635 | 0.1277992 | 0.021964936
rs4145905 | SORBS1 | 3286 | 0.4065733414485697 | 10 | 0.67 | 0.1999335224 | 0.1267659 | 0.023283734
rs10143429 | C14ORF129 | 1542 | 0.9293125810635539 | 10 | 0.57 | 0.0013102479 | 0.1210797 | 0.026972885 |  |  | missing nonAPA homozygotes
rs4558 | TJP2 | 830 | 0.7469879518072289 | 8 | 0.63 | 0.0515177845 | 0.1180997 | 0.02812092 |  |  | missing nonAPA homozygotes
[NAME] | NLRC5 | 996 | 0.07429718875502007 | 9 | 0.5 | 0.1524821453 | 0.1166036 | 0.029484017
rs3731661 | WDR35 | 3290 | 0.7483282674772036 | 10 | 0.7 | 0.0262437477 | 0.1155634 | 0.032434752
rs12479 | HSPA13 | 2501 | 0.267093162734906 | 13 | 0.56 | 0.1169408628 | 0.1174222 | 0.032704553
rs3750992 | TRIM68 | 1604 | 0.1134663341645885 | 11 | 0.49 | 0.1549811442 | 0.1160933 | 0.034268578
rs158688 | SYK | 2950 | 0.3294915254237288 | 5 | 0.25 | 0.1105918062 | 0.1155533 | 0.034921402
rs10476052 | ICHTHYIN | 1762 | 0.3212258796821794 | 5 | 0.53 | 0.1607310149 | 0.1146687 | 0.035151001 |  |  | missing APA homozygotes
[NAME] | LTBP1 | 963 | 0.1121495327102804 | 7 | 0.45 | 0.1192906284 | 0.1151074 | 0.03546813
rs3748983 | FLJ11151 | 5087 | 0.09494790642815018 | 10 | 0.53 | 0.2747722887 | 0.1091739 | 0.03665115 |  |  | missing APA homozygotes
[NAME] | UBE2Z | 1926 | 0.3618899273104881 | 4 | 0.58 | 0.0751952817 | 0.1122998 | 0.039686642
rs11708200 | NPHP3 | 1300 | 0.2038461538461538 | 8 | 0.49 | 0.2191181304 | 0.1066086 | 0.041036386 |  |  | missing APA homozygotes
SNP: | SNP rsid
Gene: | gene name
3'UTRlength: | 3'UTR length
SNPprop: | proportion of the 3'UTR upstream of the SNP
Signal: | APA signal rank
GU: | GU level downstream of the SNP
DS Lymphoblastoid cell: | miRNA score of the SNP based on lymphoblastoid miRNA expression and target prediction
pearson r: | pearson correlation coefficient between the SNP and gene expression
pvalue: | p-value without correction for multiple testing
BH pv: | p-value after benjamini correction
bonf pv: | p-value after bonferonni correction