Spreadsheet: 164af379-9bc4-4fd4-a158-85f36e83530a
Sheet: Sheet1

Supplementary Table S2: Genes and quantitative PCR assays | Unnamed: 1 | Unnamed: 2 | Unnamed: 3 | Unnamed: 4 | Unnamed: 5 | Unnamed: 6 | Unnamed: 7 | Unnamed: 8
Gene | Position | Category | Forward primer ID | Forward primer sequence | Reverse primer ID | Reverse primer sequence | Taqman probe ID | [NAME] probe sequence
Asb3 | 30854398 | centromeric | Asb3_1_F | TGCTGGATTTGACCCATTGA | Asb3_1_R | AAGGATGTCATCACTGGCTGAA | Asb3_1 | AACCCAAGAGCTGCTGCACAG
Foxi1 | 34104341 | centromeric | Foxi1_1_F | CATAAAGCTGGTTACGGCAAATG | Foxi1_1_R | GGTGTTGAATTCTGAGAGCATCAC | Foxi1_1 | ACGCACACTCCCCACTGGCTT
Odz2 | 35850092 | centromeric | Odz2_1_F | TGCTACCACCACACCCATCA | Odz2_1_R | TCACCCGCCCTTCTTTGA | Odz2_1 | CGGCAAAGGCATCATGTTTGC
Mat2b | 40522739 | centromeric | Mat2b_1_F | GCTCGATTGCTCCAAATTGG | Mat2b_1_R | TCTTTGATTCCAGTTCGAAATGGT | Mat2b_1 | TCCTCTGGCCAATGCCCAACGT
Adra1b | 43618029 | centromeric | Adra1b_1_F | CGCCGTATTCAAGGTAGTGTTCT | Adra1b_1_R | TGGAGCACGGGTAGATGATG | Adra1b_1 | CTGGGCTACTTCAACAGCTGCCTCAACC
Timd2 | 46514091 | centromeric | Timd2_1_F | TTGTATCAGCACCGCCTCAGT | Timd2_1_R | AAATCAACCCTCTGAAATGTTCACA | Timd2_1 | TCTCCATTCACTGCAGCGATTCTCTCAA
Rasgef1c | 49810784 | centromeric | Rasgef1c_1_F | CGTTGAGGCCTACGTGAAGTG | Rasgef1c_1_R | TGGCTGGCATGCAGATTTC | Rasgef1c_1 | TTCAACAGACTATGCTACCTGGTAGCA
Hspa4 | 53104592 | centromeric | Hspa4_1_F | TGGAAGGTCTAGGTGGAGATCAC | Hspa4_1_R | AAAGCACCAGCCCCACAA | Hspa4_1 | CCAGCATTCTCTGCCTGTGGG
Zfp39 | 58704348 | centromeric | Zfp39_1_F | TGGGAACATTTGCGGTTATTG | Zfp39_1_R | AATATGGCTGGCCCCTATTACTG | [NAME] | CCAGTAGCAACTCCAGCCTCCAGT
Hist3h2ba+b | 58765285 | centromeric | Hist3h2ba+b_1_F | CCGGACACCGGCATCTC | Hist3h2ba+b_1_R | CGAAGATGTCATTGACGAACGA | Hist3h2ba+b_1 | CCAAGGCCATGGGCATCATG
Trim17 | 58781713 | centromeric | Trim17_1_F | CCTCTGGATGAGGCTGCAA | Trim17_1_R | TCTTCATCATCTCCTCCCGTAGA | Trim17_1 | TTTTATGTCCTCCTCCAACTTGAGCTTATA
Trim11 | 58797459 | centromeric | Trim11_1_F | GCACCTACGGAAACAAATGGA | Trim11_1_R | CCACAAGGCACAGGTTTCCT | Trim11_1 | ACGCAATGCTGTTCCAAGCCCAG
Obscn | 58812198 | centromeric | Obscn_1_F | GCTTCTCCCCAGCACAAAGA | Obscn_1_R | CTGCCGCACCACACTGAA | Obscn_1 | TGCCTTCCAGATGCAGATCCGGAG
Mrpl55 | 59021885 | centromeric | Mrpl55_1_F | GGCCCGGTTCCGAAAAC | Mrpl55_1_R | CTGTCCACTACCTCTGGCTCTTC | Mrpl55_1 | TCCCTCTTCTGCTGGAGCTGAGCCT
Csn3 | 59649098 | SMS/PTLS | Csn3_1_F | TGTAATGGCGAGCACATTCG | Csn3_1_R | GCATTTGTTAGCTGATGGCAAA | Csn3_1 | CCCAGCAAACGTATCTGTTGCATA
Rai1 | 60014223 | SMS/PTLS | Rai1_1_F | AAGAGGCTGCCGTTGTAATCC | Rai1_1_R | TGTGGGCGCAGCTCTTC | Rai1_1 | TCCTCGGAGTTTCGGCCACACG
Rai1 | 60014252 | SMS/PTLS | Rai1_2_F | CCGAAACTCCGAGGAAGAAGA | Rai1_2_R | CCTAGACCCTGGATGGGATCA | Rai1_2 | TGCGCCCACAGCCGGTCC
Srepf1 | 60016033 | SMS/PTLS | Srebf1_1_F | CCTTGAGGACCTTTGTCATTGG | Srebf1_1_R | CGGCATGGTCCTGATTGC | Srepf1_1 | TCAGGCTCACCCTCTGGAAGACCACA
Drg2 | 60280382 | SMS/PTLS | Drg2_1_F | TGGCCCTCACCTGCATTT | Drg2_1_R | CGGAGAATGATGGCGTCTGT | Drg2_1 | CACCAAGAAGAGAGGACAGAGACCGGACTT
Drg2 | 60280382 | SMS/PTLS | Drg2_2_F | GATCTTCAACGCCGAGGTACTC | Drg2_2_R | GTTGCCCACAATCACATCGA | Drg2_2 | TCCGAGAAGACTGCTCTCCAGACGACTT
Myo15 | 60340675 | SMS/PTLS | Myo15_1_F | CTCAACTTCCTCAGCACCAAGA | Myo15_1_R | [NAME] | Myo15_1 | CCATGAGTTGATTGTGAAGATTCCC
Llgl1 | 60528416 | SMS/PTLS | Llgl1_1_F | CATCAGTGGCATCGCTTCCT | Llgl1_1_R | TGTTGCGAGCACTCAGTGAGA | Llgl1_1 | ACGTCACGGCCAGGGCTTTTACTTGA
Llgl1 | 60529319 | SMS/PTLS | Llgl1_2_F | CCCAGCTCTCCTGAGGACTCT | Llgl1_2_R | GTAGGCCCGACAAGCATCA | Llgl1_2 | TGCCTCCAGGTTCCGCAGTTCTTCT
Shmt1 | 60611137 | SMS/PTLS | Shmt1_1_F | ACAACCCACAAGACCCTGAGA | Shmt1_1_R | ACTGCGCACACCCTTTCTG | Shmt1_1 | CTGCCGTGCTGGTATGATATTCT
Kcnj12 | 60886271 | SMS/PTLS | Kcnj12_2_F | TCCTGGAGGGCATGGTAGAG | Kcnj12_2_R | TCTCGTTAGCCAGGTAGGAACTG | Kcnj12_2 | CCACAGCCATGACCACACAGGCTC
Aldh3a2 | 61061990 | SMS/PTLS | Aldh3a2_1_F | GCTTGAGACCGGCCTTCAG | Aldh3a2_1_R | GGGTGGTGCGCTATGAATAAG | Aldh3a2_1 | [NAME]
Zfp179 | 61264877 | SMS/PTLS | Zfp179_2_F | CCACACCTCCGATTGCATTC | Zfp179_2_R | CTTTCCCTTCCCACACTTTGG | Zfp179_2 | CTAAAGCAGTCCGTGCCAGGTTCT
Mfap4 | 61302347 | telomeric | Mfap4_1_F | CCGTCTTCTGCGACATGACA | Mfap4_1_R | AGCCGTTGAATCTTTTCTGGAA | Mfap4_1 | ACCGTCCACTTGCCGCCCTCA
[NAME] | 61305262 | telomeric | [NAME] | CCTCCAAGAGCCCTGAAACC | Mapk7_1_R | TGGACCTTGATGCTGGGTCTA | Mapk7_1 | CAGCTTGTGCCTTGCTGCCAGG
Eppb9 | 61328620 | telomeric | Eppb9_1_F | GTGAAGGCCGGGAAGTGA | Eppb9_1_R | [NAME] | Eppb9_1 | CGTGTTCGCTCTCAGGGATTT
Epn2 | 61348836 | telomeric | Epn2_1_F | AAAGAAAGAGGCGAAAGCTTGTT | Epn2_1_R | GGAGGGCATCCATTAAATCCA | Epn2_1 | CAAGCCAGGCTCCCACTCCCAG
Prpsap2 | 61547618 | telomeric | Prpsap2_1_F | CAAGACTGTGGACATCAGCATGA | Prpsap2_1_R | CATGGACTCCCCGTTGTGA | Prpsap2_1 | CCTCTCAGAAGCCATCCGCCGA
Ulk2 | 61593891 | telomeric | Ulk2_1_F | CCGTGGACTGGCATGGA | Ulk2_1_R | TGTCCTGGGATGGGTGACA | Ulk2_1 | AACCAAGACGTAATCCCAAATGTATCACCTCCT
Akap10 | 61732442 | telomeric | Akap10_1_F | CGGCGGAAAGTGAAAGGTAA | Akap10_1_R | GGAATGTACGGCTACTGAAGCTTTA | Akap10_1 | TGGACTTGACATCTAAGGTCTTCTCTTGCT
Specc1 | 62038881 | telomeric | Specc1_1_F | GCACCACTACCAACACAAATGAA | Specc1_1_R | GTGGGTGCTGGGAACACTTC | Specc1_1 | CGGGAACCACCAGCCATCTGAAG
Ttc19 | 62131326 | telomeric | Ttc19_1_F | TCTGGGTGCCACGAAGGA | Ttc19_1_R | AGTCCACTGGCAATCGTACTCA | [NAME] | CCGCCTACCTCTACCACCAGGG
Cox10 | 63780080 | telomeric | Cox10_1_F | TCGGCTTCCGCTTCTACGT | Cox10_1_R | CACAGGCTGCAGAAGAACAGTT | Cox10_1 | CCTTGAGCTCCTGCGGTCTGCGT
[NAME] | 65504439 | telomeric | Map2k4_1_F | CCCTTCCCCACAGTTCGTT | Map2k4_1_R | AATGTGAAAAACAAGGCAGAATACTAGA | Map2k4_1 | TCGCCATGCGGCTTTTGCTCA
Rcvrn | 67516199 | telomeric | Rcvrn_1_F | TGAAACTCCTCCCAGATGATGA | Rcvrn_1_R | TTCCAAAGAATGCCCAGATCTT | Rcvrn_1 | AACACCCCAGAAAAGCGGGCTGA
Ndel1 | 68637644 | telomeric | Ndel1_1_F | GCCCAAAGTGCCCAAGGT | Ndel1_1_R | AGCTGGATCAAAGCCATTTACTG | Ndel1_1 | CCCTTTATGGAAGAAAGTTGCTCGCCCT
Fbxo39 | 72117860 | telomeric | Fbxo39_1_F | CAGCAAGCCCCT TTAAGACTGA | Fbxo39_1_R | [NAME] | Fbxo39_1 | CATCTCTCCGGCCCCCAAAACC
Cyb5d2 | 72593444 | telomeric | Cyb5d2_1_F | GGTGTTGCCTGAATCAGAGCTT | Cyb5d2_1_R | CACAGTCCTGCTCCAAGTACCA | Cyb5d2_1 | CACTCTGCCCATCATGCCAGTCCTG
Pafah1b1 | 74490150 | telomeric | Pafah1b1_1_F | GGTACCAATGTAGAGGAGCAAAGC | Pafah1b1_1_R | TCCTCCGTTGTCAGTGAGTCACT | Pafah1b1_1 | CTGGGTTTCCTCCCCTGCAG
Gdpd1 | 86854036 | telomeric | Gdpd1_1_F | CCTTATTGATGCGGAAAGCTCTA | Gdpd1_1_R | AACCCAAACGTACACTTGAATGC | Gdpd1_1 | TTGACCACCTCACCGCCCGG
Msi2 | 88157312 | telomeric | Msi2_1_F | CCCCAGGAGCCTCTGCATA | Msi2_1_R | TGTGAGGCTGTTTGGTTTTCC | Msi2_1 | TGGTTCGTGGCCTTCTTCTCACCCAT
Tmem100 | 89846774 | telomeric | Tmem100_1_F | TGTCGGCCTCGCTGTTG | Tmem100_1_R | TGCCTCTTTCTCAGCCAGAAG | Tmem100_1 | CCGCCGCTTGCTGCTGTCTCA