Spreadsheet: da2bba8c-a9d1-46bb-a6a1-532e678293b4
Sheet: MIENS complient table

GROUP | Variable Name | Units | A1 | A2 | D1 | D2 | E1 | E2
mimarks_investigation | experimental_factor | Alphanumeric | Store | Store | Store | Store | Store | Store
mimarks_investigation | investigation_type | Alphanumeric | MIMARKS survey | MIMARKS survey | MIMARKS survey | MIMARKS survey | MIMARKS survey | MIMARKS survey | MIMARKS survey
mimarks_investigation | project_name | Alphanumeric | Pathogen pollution in the pet trade | Pathogen pollution in the pet trade | Pathogen pollution in the pet trade | Pathogen pollution in the pet trade | Pathogen pollution in the pet trade | Pathogen pollution in the pet trade
mimarks_investigation | sample_type | Alphanumeric | water | water | water | water | water | water
mimarks_investigation | [NAME] | Alphanumeric | SRP013874 | SRP013874 | SRP013874 | SRP013874 | SRP013874 | SRP013874
mimarks_environment | collection_date | YYYY-MM-DDThh:[NAME]:ss+/-NN | 2009-12-09 00:00:00 | 2009-12-09 00:00:00 | 2009-12-09 00:00:00 | 2009-12-09 00:00:00 | 2009-12-09 00:00:00 | 2009-12-09 00:00:00
mimarks_environment | country | Alphanumeric | USA | USA | USA | USA | USA | USA
mimarks_environment | environment | Alphanumeric | fish tank | fish tank | fish tank | fish tank | fish tank | fish tank
mimarks_environment | envo_biome | Alphanumeric | aquatic biome | aquatic biome | aquatic biome | aquatic biome | aquatic biome | aquatic biome
mimarks_environment | envo_feature | Alphanumeric | anthropogenic feature | anthropogenic feature | anthropogenic feature | anthropogenic feature | anthropogenic feature | anthropogenic feature
mimarks_environment | envo_material | Alphanumeric | fresh water | fresh water | fresh water | fresh water | fresh water | fresh water
mimarks_environment | habitat | Alphanumeric | man-made | man-made | man-made | man-made | man-made | man-made
mimarks_environment | lat_lon | +/-decimalDegree+/-decimalDegree | +41.8-71.4 | +41.8-71.4 | +41.8-71.4 | +41.8-71.4 | +41.8-71.4 | +41.8-71.4
mimarks_extension | env_package | Alphanumeric | water | water | water | water | water | water
mimarks_nucleic_acid_sequence_source | samp_collect_device | Alphanumeric | 0.2 micron sterivex | 0.2 micron sterivex | 0.2 micron sterivex | 0.2 micron sterivex | 0.2 micron sterivex | 0.2 micron sterivex
mimarks_nucleic_acid_sequence_source | samp_size | liter | 0.6 | 0.6 | 0.6 | 0.6 | 0.6 | 0.6
mimarks_sequencing | bac_lib_reads_seqd | integer_count | 9993 | 13015 | 11368 | 8332 | 14233 | 16171
mimarks_sequencing | bac_multiplex_ident_1 | Alphanumeric | CACAC | AGAGC | [NAME] | GCGTG | GCACG | GAGCG
mimarks_sequencing | domain | Alphanumeric | Bacteria | Bacteria | Bacteria | Bacteria | Bacteria | Bacteria
mimarks_sequencing | nucl_acid_ext | Alphanumeric | http://vamps.mbl.edu/ | http://vamps.mbl.edu/ | http://vamps.mbl.edu/ | http://vamps.mbl.edu/ | http://vamps.mbl.edu/ | http://vamps.mbl.edu/
mimarks_sequencing | [NAME] | Alphanumeric | initial denaturation:94degC_4min;denaturation:94degC_45sec;annealing:55degC_45sec;elongation:72degC_1min;final elongation:72degC_10 min;30 cycles | initial denaturation:94degC_4min;denaturation:94degC_45sec;annealing:55degC_45sec;elongation:72degC_1min;final elongation:72degC_10 min;30 cycles | initial denaturation:94degC_4min;denaturation:94degC_45sec;annealing:55degC_45sec;elongation:72degC_1min;final elongation:72degC_10 min;30 cycles | initial denaturation:94degC_4min;denaturation:94degC_45sec;annealing:55degC_45sec;elongation:72degC_1min;final elongation:72degC_10 min;30 cycles | initial denaturation:94degC_4min;denaturation:94degC_45sec;annealing:55degC_45sec;elongation:72degC_1min;final elongation:72degC_10 min;30 cycles | initial denaturation:94degC_4min;denaturation:94degC_45sec;annealing:55degC_45sec;elongation:72degC_1min;final elongation:72degC_10 min;30 cycles |  |  | initial denaturation:94degC_4min;denaturation:94degC_45sec;annealing:55degC_45sec;elongation:72degC_1min;final elongation:72degC_10 min;30 cycles
mimarks_sequencing | pcr_primers | Alphanumeric | 341F2:CCTACGGGNGGCWGCAG; 341F2:TCTACGGAAGGCTGCAG; 925R1:CCGTCAATTCNTTTRAGT 926R3:CCGTCAATTTCTTTGAGT 926R4: CCGTCTATTCCTTTGANT | 341F2:CCTACGGGNGGCWGCAG; 341F2:TCTACGGAAGGCTGCAG; 925R1:CCGTCAATTCNTTTRAGT 926R3:CCGTCAATTTCTTTGAGT 926R4: CCGTCTATTCCTTTGANT | 341F2:CCTACGGGNGGCWGCAG; 341F2:TCTACGGAAGGCTGCAG; 925R1:CCGTCAATTCNTTTRAGT 926R3:CCGTCAATTTCTTTGAGT 926R4: CCGTCTATTCCTTTGANT | 341F2:CCTACGGGNGGCWGCAG; 341F2:TCTACGGAAGGCTGCAG; 925R1:CCGTCAATTCNTTTRAGT 926R3:CCGTCAATTTCTTTGAGT 926R4: CCGTCTATTCCTTTGANT | 341F2:CCTACGGGNGGCWGCAG; 341F2:TCTACGGAAGGCTGCAG; 925R1:CCGTCAATTCNTTTRAGT 926R3:CCGTCAATTTCTTTGAGT 926R4: CCGTCTATTCCTTTGANT | 341F2:CCTACGGGNGGCWGCAG; 341F2:TCTACGGAAGGCTGCAG; 925R1:CCGTCAATTCNTTTRAGT 926R3:CCGTCAATTTCTTTGAGT 926R4: CCGTCTATTCCTTTGANT
mimarks_sequencing | seq_quality_check | Alphanumeric | VAMPS | VAMPS | VAMPS | VAMPS | VAMPS | VAMPS
mimarks_sequencing | sequencing_meth | Alphanumeric | GS FLX LR70 454 pyrosequencing | GS FLX LR70 454 pyrosequencing | GS FLX LR70 454 pyrosequencing | GS FLX LR70 454 pyrosequencing | GS FLX LR70 454 pyrosequencing | GS FLX LR70 454 pyrosequencing
mimarks_sequencing | sop | Alphanumeric | MBL-BPC | MBL-BPC | MBL-BPC | MBL-BPC | MBL-BPC | MBL-BPC
mimarks_sequencing | target_gene | Alphanumeric | 16S rRNA | 16S rRNA | 16S rRNA | 16S rRNA | 16S rRNA | 16S rRNA
mimarks_sequencing | target_subfragment | Alphanumeric | V3-V5 | V3-V5 | V3-V5 | V3-V5 | V3-V5 | V3-V5