Spreadsheet: d7c4b20b-c421-4ff9-b494-a6b38962e9bd
Sheet: Sheet1

CRM | Prediction Quality (Figure 1B) | TF | CHIP | FOOTPRINT | LITERATURE SUPPORT | LITERATURE SUPPORT.1 | other comments
btd_head | Good | bcd | 1 | - | 8562425: Y (Fig 1)
btd_head | Good | [NAME] | 1 | - | 8562425: Y (Fig 3g)
cnc_5 | Good | bcd | 1 | - | 15340490: NO INFO | NOPMID1: Y | NOPMID1: [NAME], [NAME] (1993). Genetic regulation of cnc expression in the pharyngeal primordia of Drosophila blastoderm embryos. Roux's Arch. [NAME]. Biol. 202: 214
cnc_5 | Good | [NAME] | - | - | 15340490: NO INFO | NOPMID1: Y (Fig 3C) | Torso mutant abolishes expression in anterior terminal
D_4 | Fair | bcd | 1 | - | 15340490: NO INFO
D_4 | Fair | cad | 1 | - | 15340490: NO INFO
D_4 | Fair | hb | 1 | - | 15340490: NO INFO
D_4 | Fair | gt | 1 | - | 15340490: NO INFO
D_4 | Fair | [NAME] | 1 | - | 15340490: NO INFO
ems_head | Good | bcd | 1 | Y | 11731230: Y (Direct)
ems_head | Good | kni | 25 | - | N
ems_head | Good | [NAME] | 1 | Y | 11731230: Y (Direct)
eve_stripe1 | Good | bcd | 1 | - | 10226011: NO INFO ON ACTVN | 9367430: Y (Fig 7)
eve_stripe3_7 | Fair | kni | 1 | Y | 8626035: Y (abstract)
[NAME] | Fair | hb | 1 | - | 10226011: Y (abstract)
[NAME] | Fair | [NAME] | 1 | - | 10226011: Y (Fig 2M,N); direct/indirect (through hb) ?
eve_stripe5 | Good | hb | 1 | - | 10226011: N
eve_stripe5 | Good | Kr | 1 | - | 10226011: Y (Fig 2)
eve_stripe5 | Good | gt | 1 | - | 10226011: Y (Fig 2)
eve_stripe5 | Good | [NAME] | 1 | - | N
eve_stripe5 | Good | hkb | 1 | - | N
fkh_2 | Good | kni | 25 |  | 15340490: NO INFO | 9609826: NO INFO | Cad, [NAME], [NAME] are regulators
fkh_2 | Good | fkh | - | - | 15340490: NO INFO | 9609826: NO INFO
fkh_2 | Good | [NAME] | - | - | 15340490: NO INFO | 9609826: NO INFO
gt_10 | Good | bcd | 1 | - | 1716553: Y
gt_10 | Good | kni | 1 | - | 1716553: N
gt_10 | Good | kr | 1 | - | 1893878: Y (abstract)
gt_10 | Good | hkb | 1 | - | 1716553: Y
gt_6 | Good | bcd | 1 | - | 1716553: Y
gt_6 | Good | gt | 1 | - | N |  | Auto-regulation prediction for a repressor is anomalous under our model
gt_6 | Good | kr | 25 |  | 1716553: N
[NAME] | Fair | cad | 1 | - | 7617036: Y (Fig 4)
[NAME] | Fair | hb | 1 | - | 1716553: Y
[NAME] | Fair | kr | 1 | - | 1716553: Y
h_stripe1 | Good | bcd | 1 | - | 1902805: Y
h_stripe1 | Good | kr | 1 | - | 1902805: N
h_stripe1 | Good | [NAME] | 1 | - | 1902805: ? (terminal system defines anterior edge)
h_stripe3 | Fair | kni | 1 | y | 8186146: Y (but speculate kni as activator)
h_stripe4 | Fair | - | - | -
h_stripe5 | Good | hb | 1 | - | 7607084: Y
h_stripe5 | Good | kr | 1 | y | 7607084: Y
h_stripe5 | Good | gt | 1 | - | 7607084: Y
h_stripe5 | Good | [NAME] | 1 | - | 7607084: Y
h_stripe6 | Fair | cad | 1 | - | 9507113: Y
h_stripe6 | Fair | hb | 1 | y | 7607084: Y
h_stripe6 | Fair | kr | 1 |  | 2331752:Y
h_stripe7 | Fair | hb | 1 | y | 1170066: Y? (discussion, no direct result)
h_stripe7 | Fair | kni | 1 | y | 1170066: Y
hb_centr_and_pos | Fair | kni | 1 | - | N (but see 9118805)
hb_centr_and_pos | Fair | Kr | 1 | - | N (but see 9729485)
hkb_ventral_elem | Good | bcd | 1 | - | 10952897: Y
hkb_ventral_elem | Good | fkh | - | - | N
hkb_ventral_elem | Good | [NAME] | - |  | 10652276:Y
kni_1 | Fair | hb | 1 | - | 8087852: Y
kni_1 | Fair | [NAME] | 1 | - | 1925599: Y | 2797151: Y
kni_5 | Good | bcd | 1 | - | 7617036: Y
kni_5 | Good | [NAME] | 1 | - | 2797151: Y | 1925599: Y
kni_5 | Good | [NAME] | - |  | 18034187:Y
kni_kd | Good | bcd | 1 | y | 7617036: Y
kni_kd | Good | cad | 1 | y | 7617036: Y
kni_kd | Good | hb | 1 | y | 8087852: Y
kni_kd | Good | Kr | 1 | y | N
kni_kd | Good | gt | 1 | y | 1716553: Y
kni_kd | Good | [NAME] | 1 | y | 2797151: Y | 1925599: Y
knrl_8 | Fair | bcd | 100 |  | 15340490: NO INFO
knrl_8 | Fair | cad | 100 |  | 15340490: NO INFO
knrl_8 | Fair | hb | 100 |  | 15340490: NO INFO
knrl_8 | Fair | [NAME] | 100 |  | 15340490: NO INFO
Kr_CD2_AD1 | Good | bcd | 1 | - | 452917: Y (info for CD1 only)
Kr_CD2_AD1 | Good | hb | 1 | - | 452917: Y (info for CD1 only)
Kr_CD2_AD1 | Good | kni | 25 | - | 1348871: Y (info for CD1 only)
Kr_CD2_AD1 | Good | gt | 1 | y | 1170316: Y
Kr_CD2_AD1 | Good | [NAME] | 1 | - | 1348871: Y (info for CD1 only)
[NAME] | Good | cad | 1 | - | N (no comment on activator was found in 8519192)
[NAME] | Good | hb | 1 | - | 8518192: Y
[NAME] | Good | [NAME] | 1 | - | 8518192: Y
oc_7 | Good | bcd | 1 | - | 9753673: Y (title)
oc_otd_early | Fair | bcd | 1 | - | 9753673: Y (title)
oc_otd_early | Fair | Kr | 1 | - | N
odd_3 | Good | cad | 1 | - | 15340490: NO INFO |  | traditionally considered secondary pair-rule, these primary pair-rule modules first found by [NAME]. 2004; no dissection done there)
odd_3 | Good | hb | 1 | - | 15340490: NO INFO
odd_3 | Good | kni | 1 | - | 15340490: NO INFO
odd_3 | Good | [NAME] | 1 | - | 15340490: NO INFO
odd_5 | Fair | hkb | 1 |  | 15340490: NO INFO
pdm2_1 | Good | cad | 1 | - | N  (no comment on activator was found in 8519192)
pdm2_1 | Good | hb | 1 | - | 8518192: Y
pdm2_1 | Good | [NAME] | 100 | - | N
pdm2_1 | Good | hkb | 25 | - | N
run_stripe3 | Good | kni | 1 | - | 9118805: Y | 8660878: Y | Hb should have been predicted as edge, but our [NAME] is very narrow (and maybe not precisely located)
run_stripe3 | Good | gt | 1 | - | 8660878: N
run_stripe3 | Good | [NAME] | 100 | - | N
run_stripe3 | Good | hkb | 100 | - | N
slp2_3 | Good | bcd | 1 | - | 15340490: NO INFO | 7720559:Y
slp2_3 | Good | kr | 1 | - | 15340490: NO INFO | 7720559:Y
slp2_3 | Good | hkb | 1 | - | 15340490: NO INFO | 7720559:N
[NAME] | Good | bcd | 1 | y | 8443106: Y
[NAME] | Good | Kr | 1 | - | N
[NAME] | Good | gt | 1 | - | N
[NAME] | Good | [NAME] | - | - | 10652276:Y
tll_P3 | Fair | cad | 1 | - | N
tll_P3 | Fair | kr | 1 |  | 12814553:Y
tll_P3 | Fair | gt | 1 |  | 12814553:Y
tll_P3 | Fair | [NAME] |  | - | 10652276:Y
 |  | 1% [NAME]: | 82
 |  | 25% [NAME]: | 5
 |  | UNBOUND | 7