Spreadsheet: 70eaec44-806e-41d4-846f-2be5944eee68
Sheet: Sheet1

Transcript_cluster_id | [NAME] | [NAME] | Fold change AGN193109 vs veh | Fold change AGN193109+tRA vs veh | Fold change DEAB vs veh | Fold change DEAB+tRA vs veh | [NAME]
10523128 | Ppbp | pro-platelet basic protein | 0.10536 | 0.652673 | 0.162664 | 1.84719 | 57349
10510129 | Dhrs3 | dehydrogenase/reductase (SDR family) member 3 | 0.11643 | 0.264719 | 0.199271 | 2.02628 | 20148
10499899 | Sprr1a | small proline-rich protein 1A | 0.145989 | 0.724638 | 0.216394 | 2.52859 | 20753
10366546 | Cpm | carboxypeptidase M | 0.194288 | 0.590961 | 0.43407 | 1.32501 | 70574
10464137 | 9930023K05Rik | RIKEN cDNA 9930023K05 gene | 0.229389 | 0.627346 | 0.425933 | 1.59944 | 226245
10355534 | Tns1 | tensin 1 | 0.310314 | 0.55038 | 0.436756 | 1.27221 | 21961
10412267 | Itga2 | [NAME] 2 | 0.310414 | 0.860552 | 0.389906 | 1.25064 | 16398
10517727 | [NAME] | kelch domain containing 7A | 0.322462 | 0.534736 | 0.473608 | 1.02873 | 242721
10522895 | Csn3 | casein kappa | 0.343211 | 0.523236 | 0.459456 | 1.17759 | 12994
10529515 | Sorcs2 | sortilin-related VPS10 domain containing receptor 2 | 0.375816 | 0.68332 | 0.487239 | 1.17753 | 81840
10375360 | Ebf1 | early B-cell factor 1 | 0.37652 | 0.699583 | 0.411824 | 1.32663 | 13591
10481627 | Lcn2 | lipocalin 2 | 0.403041 | 0.781509 | 0.562529 | 1.15615 | 16819
10356764 | 2310007B03Rik | RIKEN cDNA 2310007B03 gene | 0.433058 | 0.631082 | 0.705296 | 1.00208 | 71874
10582403 | Galns | galactosamine (N-acetyl)-6-sulfate sulfatase | 0.441137 | 0.644358 | 0.591179 | 1.06511 | 50917
10427796 | Npr3 | natriuretic peptide receptor 3 | 0.452064 | 0.9675 | 0.501446 | 1.51957 | 18162
10439087 | Muc20 | mucin 20 | 0.478901 | 0.542088 | 0.459414 | 1.08495 | 224116
10502575 | Clca4 | chloride channel calcium activated 4 | 0.483772 | 1.31741 | 0.56114 | 1.9384 | 229927
10526441 | Upk3b | uroplakin 3B | 0.487779 | 0.666865 | 0.678051 | 1.07477 | 100647
10443764 | Slc37a1 | solute carrier family 37 (glycerol-3-phosphate transporter), member 1 | 0.500347 | 0.753424 | 0.653307 | 1.16328 | 224674
10428081 | Hrsp12 | heat-responsive protein 12 | 0.505576 | 0.789676 | 0.606957 | 1.05976 | 15473
10526452 | 2310043J07Rik | RIKEN cDNA 2310043J07 gene | 0.506406 | 0.711285 | 0.731552 | 1.10463 | 69665
10489204 | Tgm2 | transglutaminase 2, C polypeptide | 0.50705 | 0.59602 | 0.667852 | 1.06703 | 21817
10436727 | ORF63 | open reading frame 63 | 0.514271 | 0.852241 | 0.646475 | 1.19637 | 224419
10571274 | Gsr | glutathione reductase | 0.525829 | 0.79959 | 0.704823 | 1.11703 | 14782
10492330 | [NAME] | purinergic receptor P2Y, G-protein coupled 1 | 0.547843 | 0.724203 | 0.695361 | 1.16425 | 18441
10467887 | Cpn1 | carboxypeptidase N, polypeptide 1 | 0.551819 | 0.895397 | 0.625652 | 1.35229 | 93721
10376490 | Wnt9a | wingless-type MMTV integration site 9A | 0.556518 | 0.830374 | 0.626376 | 1.20642 | 216795
10507152 | Cyp4a12b | cytochrome P450, family 4, subfamily a, polypeptide 12B | 0.562347 | 0.79935 | 0.692619 | 1.02562 | 13118
10466304 | Dtx4 | deltex 4 homolog (Drosophila) | 0.570764 | 0.705524 | 0.757981 | 1.24286 | 207521
10565689 | Capn5 | calpain 5 | 0.572508 | 0.793884 | 0.757981 | 1.24286 | 12337
10594404 | Smad3 | MAD homolog 3 (Drosophila) | 0.573819 | 0.792968 | 0.728668 | 1.10675 | 17127
10501229 | [NAME] | glutathione S-transferase, mu 1 | 0.57621 | 0.997001 | 0.750366 | 1.1829 | 14862
10595081 | Tinag | tubulointerstitial nephritis antigen | 0.578879 | 0.823896 | 0.618895 | 1.03469 | 26944
10423505 | Cmbl | carboxymethylenebutenolidase-like (Pseudomonas) | 0.57932 | 0.699227 | 0.662672 | 0.915501 | 69574
10454172 | Dsg2 | desmoglein 2 | 0.588589 | 0.852635 | 0.735604 | 1.11445 | 13511
10449741 | Sik1 | salt inducible kinase 1 | 0.590592 | 0.730353 | 0.649319 | 1.21279 | 17691
10597182 | Nbeal2 | neurobeachin-like 2 | 0.593944 | 0.847528 | 0.808359 | 1.11111 | 235627
10393266 | Foxj1 | forkhead box J1 | 0.596544 | 0.767745 | 0.789111 | 1.04972 | 15223
10523021 | Slc4a4 | solute carrier family 4 (anion exchanger), member 4 | 0.598808 | 0.900418 | 1.02716 | 0.894612 | 54403
10490129 | Bmp7 | bone morphogenetic protein 7 | 0.601179 | 0.841694 | 0.769699 | 1.16832 | 12162
10581664 | Il34 | interleukin 34 | 0.606733 | 0.896619 | 0.86792 | 1.13524 | 76527
10576088 | Gm22 | predicted gene 22 | 0.611165 | 0.88587 | 0.657137 | 1.20918 | 195209
10349782 | Nuak2 | NUAK family, SNF1-like kinase, 2 | 0.615615 | 0.903336 | 0.790224 | 1.10599 | 74137
10509568 | [NAME] | calcium/calmodulin-dependent protein kinase II inhibitor 1 | 0.61597 | 0.766345 | 0.719068 | 1.05438 | 66259
10501222 | Gstm2 | glutathione S-transferase, mu 2 | 0.616141 | 0.857971 | 0.735094 | 1.11162 | 14863
10460666 | Ltbp3 | latent transforming growth factor beta binding protein 3 | 0.625176 | 0.809255 | 0.797561 | 1.09759 | 16998
10399691 | Id2 | inhibitor of DNA binding 2 | 0.629378 | 0.92916 | 0.762425 | 1.07351 | 15902
10422028 | Tbc1d4 | TBC1 domain family, member 4 | 0.63031 | 0.857475 | 0.716315 | 1.01487 | 210789
10401238 | Zfp36l1 | zinc finger protein 36, C3H type-like 1 | 0.634196 | 0.892135 | 0.721131 | 1.13288 | 12192
10558535 | Gpr123 | G protein-coupled receptor 123 | 0.640928 | 0.800367 | 0.692299 | 1.07423 | 52389
10435271 | Heg1 | HEG homolog 1 (zebrafish) | 0.642158 | 0.934975 | 0.766841 | 1.17311 | 77446
10430660 | Pdgfb | platelet derived growth factor, B polypeptide | 0.649019 | 0.92723 | 0.778445 | 1.12688 | 18591
10424667 | 4930572J05Rik | RIKEN cDNA 4930572J05 gene | 0.654894 | 0.91658 | 0.852438 | 1.08623 | 223626
10516735 | Tinagl1 | tubulointerstitial nephritis antigen-like 1 | 0.655197 | 0.850864 | 0.79996 | 1.08774 | 94242
10548128 | Tspan9 | tetraspanin 9 | 0.657319 | 0.845182 | 0.720298 | 1.08172 | 109246
10417798 | [NAME] | potassium channel, subfamily K, member 5 | 0.658444 | 0.850392 | 0.792509 | 1.03519 | 16529
10357239 | Tmem37 | [NAME] 37 | 0.665049 | 0.747096 | 0.793609 | 1.08455 | 170706
10485198 | Tspan18 | tetraspanin 18 | 0.671317 | 0.879162 | 0.808115 | 1.26529 | 241556
10555205 | Gdpd5 | glycerophosphodiester phosphodiesterase domain containing 5 | 0.673197 | 0.772354 | 0.792015 | 1.17824 | 233552
10449000 | Msln | mesothelin | 0.6794 | 0.868541 | 0.873775 | 1.08323 | 56047
10423471 | Ctnnd2 | catenin (cadherin associated protein), delta 2 | 0.686421 | 0.84327 | 0.790005 | 1.23294 | 18163
10449284 | Dusp1 | dual specificity phosphatase 1 | 0.688248 | 0.99447 | 0.775393 | 1.20497 | 19252
10362511 | Gstm3 | glutathione S-transferase, mu 3 | 0.690286 | 0.995321 | 0.714332 | 1.16205 | 14864
10488060 | Jag1 | jagged 1 | 0.691563 | 1.21363 | 0.797008 | 1.25382 | 16449
10558150 | Htra1 | HtrA serine peptidase 1 | 0.693516 | 1.08348 | 0.809068 | 0.984639 | 56213
10446928 | Ltbp1 | latent transforming growth factor beta binding protein 1 | 0.69947 | 0.946451 | 0.719234 | 1.39997 | 268977
10387138 | Usp43 | ubiquitin specific peptidase 43 | 0.716315 | 0.83243 | 0.774892 | 1.0591 | 216835
10585803 | Stra6 | stimulated by retinoic acid gene 6 | 0.716729 | 0.783968 | 0.718786 | 1.36768 | 20897
10578109 | Ubxn8 | UBX domain protein 8 | 0.721464 | 0.782773 | 0.749846 | 0.997001 | 108159
10460221 | Chka | [NAME] alpha | 0.723802 | 0.894612 | 0.813755 | 1.11111 | 12660
10408450 | Sox4 | SRY-box containing gene 4 | 0.723953 | 0.903335 | 0.782954 | 1.09885 | 20677
10445678 | 1700001C19Rik /// AI661453 | RIKEN cDNA 1700001C19 gene /// expressed sequence AI661453 | 0.742039 | 0.785146 | 0.850667 | 1.05919 | 75462 /// 224833
10539238 | Fam176a | family with sequence similarity 176, member A | 0.748306 | 0.870852 | 0.776954 | 1.06782 | 232146
10523579 | Arhgap24 | Rho GTPase activating protein 24 | 0.754504 | 0.763959 | 0.889295 | 0.940044 | 231532
10360684 | Ephx1 | epoxide hydrolase 1, microsomal | 0.757158 | 0.722799 | 0.840508 | 1.03264 | 13849
10572097 | Sh2d4a | SH2 domain containing 4A | 0.76121 | 0.893166 | 0.773961 | 1.0037 | 72281
10492682 | Fam198b | family with sequence similarity 198, member B | 0.764541 | 0.936056 | 0.788764 | 1.15562 | 68659
10468691 | Ablim1 | actin-binding LIM protein 1 | 0.768082 | 0.932602 | 0.852438 | 1.04681 | 226251
10574259 | Gpr56 | G protein-coupled receptor 56 | 0.768438 | 0.868943 | 0.885972 | 1.01724 | 14766
10364093 | Derl3 | Der1-like domain family, member 3 | 0.772068 | 0.968641 | 0.715108 | 1.02309 | 70377
10361897 | Ifngr1 | [NAME] receptor 1 | 0.77414 | 0.851454 | 0.798298 | 1.02645 | 15979
10376496 | [NAME] | [NAME] 4 | 0.78057 | 0.859359 | 0.911681 | 1.09429 | 194952
10535065 | Adap1 | ArfGAP with dual PH domains 1 | 0.781852 | 0.845572 | 0.88632 | 0.965803 | 231821
10580033 | Cd97 | CD97 antigen | 0.786999 | 0.928495 | 0.84148 | 1.02574 | 26364
10481621 | 1110008P14Rik | RIKEN cDNA 1110008P14 gene | 0.787763 | 0.887816 | 0.895852 | 1.05714 | 73737
10578045 | Nrg1 | [NAME] 1 | 0.800052 | 1.11296 | 0.821766 | 1.26745 | 211323
10365870 | Nr2c1 | nuclear receptor subfamily 2, group C, member 1 | 0.805524 | 0.83047 | 0.856386 | 0.982594 | 22025
10382328 | Sox9 | SRY-box containing gene 9 | 0.806455 | 1.1106 | 0.873169 | 1.22717 | 20682
10437160 | Ets2 | E26 avian leukemia oncogene 2, 3' domain | 0.808694 | 0.923382 | 0.886996 | 0.99654 | 23872
10509063 | Il22ra1 | interleukin 22 receptor, alpha 1 | 0.812402 | 0.743893 | 1.05983 | 0.869566 | 230828
10360920 | Tgfb2 | transforming growth factor, beta 2 | 0.813248 | 1.018 | 0.779705 | 1.2147 | 21808
10530841 | Igfbp7 | insulin-like growth factor binding protein 7 | 0.824543 | 1.04681 | 0.867338 | 1.07326 | 29817
10592701 | Tmem136 | [NAME] 136 | 0.839615 | 0.931568 | 0.794104 | 1 | 235300
10544596 | Tmem176b | [NAME] 176B | 0.846354 | 0.939957 | 0.816958 | 1.00882 | 65963
10400504 | Foxa1 | forkhead box A1 | 0.848881 | 0.862064 | 0.901354 | 1.01776 | 15375
10534862 | Pcolce | procollagen C-endopeptidase enhancer protein | 0.869345 | 0.764542 | 0.960817 | 0.846745 | 18542
10510574 | Errfi1 | ERBB receptor feedback inhibitor 1 | 0.909408 | 1.1321 | 0.907519 | 1.03359 | 74155
10394674 | Gm9847 /// Socs2 | suppressor of cytokine signaling 2 pseudogene /// suppressor of cytokine signaling 2 | 0.953299 | 1.04174 | 0.912566 | 1.07624 | 100043256 /// 216233
10464560 | Aldh3b1 | aldehyde dehydrogenase 3 family, member B1 | 0.968193 | 0.785128 | 1.00765 | 0.832199 | 67689
10420114 | Tgm1 | transglutaminase 1, K polypeptide | 0.997669 | 0.770696 | 1.08073 | 0.8376 | 21816
10590445 | Snrk | SNF related kinase | 1.00649 | 0.905425 | 1.08699 | 0.921464 | 20623
10538338 | 9430076C15Rik /// [NAME] | RIKEN cDNA 9430076C15 gene /// cAMP responsive element binding protein 5 | 1.08498 | 1.19969 | 0.934759 | 1.1442 | 320189 /// 231991
10348653 | Gpc1 | glypican 1 | 1.11806 | 0.904589 | 1.12324 | 0.872161 | 14733
10554240 | Isg20 | interferon-stimulated protein | 1.15429 | 0.991717 | 1.08448 | 0.857574 | 57444
10462140 | Dock8 | dedicator of cytokinesis 8 | 1.16199 | 0.95244 | 1.1343 | 0.876241 | 76088
10453272 | Zfp36l2 | zinc finger protein 36, C3H type-like 2 | 1.16581 | 1.10369 | 1.16151 | 0.93002 | 12193
10373313 | Nab2 | Ngfi-A binding protein 2 | 1.17175 | 1.08523 | 1.12298 | 0.96929 | 17937
10561128 | Cyp2s1 | cytochrome P450, family 2, subfamily s, polypeptide 1 | 1.20924 | 0.938091 | 0.927016 | 0.765815 | 74134
10514347 | Cdkn2b | cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4) | 1.2285 | 1.01953 | 1.19361 | 0.972655 | 12579
10561104 | Axl | AXL receptor [NAME] | 1.23828 | 1.0456 | 1.14896 | 0.941696 | 26362
10458569 | [NAME] | nuclear receptor subfamily 3, group C, member 1 | 1.23999 | 1.01092 | 1.09759 | 0.8978 | 14815
10553788 | [NAME] | ATPase, class V, type 10A | 1.24289 | 1.02245 | 1.13001 | 0.882295 | 11982
10352867 | Plxna2 | plexin A2 | 1.25635 | 1.03651 | 1.15191 | 0.881073 | 18845
10499394 | [NAME] | lamin A | 1.26488 | 0.979873 | 1.1677 | 0.856386 | 16905
10453939 | Lama3 | laminin, alpha 3 | 1.28248 | 0.976957 | 1.04235 | 0.825267 | 16774
10536499 | Cav1 | caveolin 1, caveolae protein | 1.30224 | 1.01654 | 1.19748 | 0.901042 | 12389
10429573 | [NAME] /// Ly6c2 | [NAME] 6 complex, locus C1 /// lymphocyte antigen 6 complex, locus C2 | 1.31427 | 0.986506 | 1.142 | 0.833238 | 17067 /// 100041546
10454782 | Egr1 | early growth response 1 | 1.32501 | 1.23856 | 1.07078 | 0.976258 | 13653
10544036 | Atp6v0a4 /// D630045J12Rik | ATPase, H+ transporting, lysosomal V0 subunit A4 /// RIKEN cDNA D630045J12 gene | 1.34484 | 1.10967 | 1.2086 | 0.816033 | 140494 /// 330286
10607738 | Car5b | carbonic anhydrase 5b, mitochondrial | 1.36194 | 1.03383 | 1.12532 | 0.781147 | 56078
10357878 | Adora1 | adenosine A1 receptor | 1.38175 | 1.1466 | 1.27285 | 0.922977 | 11539
10365482 | Timp3 | tissue inhibitor of metalloproteinase 3 | 1.38607 | 0.971532 | 1.11729 | 0.870149 | 21859
10439895 | Alcam | activated [NAME] cell adhesion molecule | 1.39439 | 0.996517 | 1.35871 | 0.948027 | 11658
10358124 | Pkp1 | plakophilin 1 | 1.40393 | 1.11242 | 1.24721 | 0.831949 | 18772
10445061 | Rnf39 | ring finger protein 39 | 1.44593 | 1.10548 | 1.17718 | 0.838956 | 386454
10429140 | Ndrg1 | N-myc downstream regulated gene 1 | 1.45364 | 0.976032 | 1.32103 | 0.803851 | 17988
10536294 | Peg10 | paternally expressed 10 | 1.52348 | 1.21254 | 1.35254 | 0.863739 | 170676
10370522 | Casp14 | caspase 14 | 1.56031 | 0.903941 | 1.15554 | 0.762055 | 12365
10402783 | Ahnak2 | AHNAK nucleoprotein 2 | 1.56808 | 0.904798 | 1.41775 | 0.703961 | 100041194
10521602 | Cpeb2 | cytoplasmic polyadenylation element binding protein 2 | 1.57251 | 1.17552 | 1.23519 | 0.866257 | 231207
10380976 | Gsdma | gasdermin A | 1.61433 | 0.986005 | 1.38687 | 0.752015 | 57911
10350516 | Ptgs2 | prostaglandin-endoperoxide synthase 2 | 1.66517 | 1.47631 | 1.23856 | 0.814884 | 19225
10414065 | Anxa8 | annexin A8 | 1.73243 | 0.907079 | 1.4258 | 0.64836 | 11752
Genes are sorted based on fold change (smallest to largest) in AGN191309 group
Genes down-regulated by one reagent but up-regulated by another
Gene suppressed by both reagents, which was further suppressed with simultaneous tRA treatment
Gene suppressed by AGN193109 and DEAB; suppression was not reversed/prevented with stimultaneous addition of tRA and AGN193109,
but was reversed with simultaneous addition of tRA and DEAB