Spreadsheet: 0225ab61-d1e7-4054-9cf1-e5d7ca00ea0c
Sheet: Sheet1

Supplementary Information | Unnamed: 1 | Unnamed: 2 | Unnamed: 3 | Unnamed: 4 | Unnamed: 5 | Unnamed: 6 | Unnamed: 7 | Unnamed: 8
Table S1. Function anotations of the 58 differentially expressed proteins under [NAME] stress. BLASTP ([NAME]) was used to search for homologues in UniProtKB and TAIR10.
Spot ID | Accession number in NCBI nr database | Protein name and plant species in NCBI nr database | Accession number in UniProtKB | Protein name in UniProtKB | Biological process anotated in UniProtKB | Subcellular location anotated in UniProtKB* | Homologs in TAIR | Subcellular location anotated in TAIR*
Photosynthesis and chloroplast organization
23 | gi|226508728 | uncharacterized protein LOC100275158 [[NAME] mays] | B6SP99 | Uncharacterized protein | photosynthetic electron transport in photosystem I | C | AT1G15980.1 | Symbols: NDF1, NDH48 | NDH-dependent cyclic electron flow 1 | C
44 | gi|13096165 | Chain A, Crystal Structure Of The Complex Between Ferredoxin And [NAME]-Nadp+ Reductase [[NAME] mays] | Q9SLP6 | Ferredoxin | photosynthetic electron transport chain, defense response to bacterium, defense response to fungus, incompatible interaction | C | AT5G66190.1 | Symbols: ATLFNR1, [NAME] | ferredoxin-NADP(+)-oxidoreductase 1 | C
50 | gi|194697374 | unknown [[NAME] mays] | B4FKX8 | NADH dehydrogenase I subunit N | NADH dehydrogenase complex (plastoquinone) assembly, defense response to fungus, incompatible interaction | C | AT5G58260.1 | Symbols: oxidoreductases, acting on NADH or NADPH, quinone or similar compound as acceptor | C
26 | gi|226503027 | uncharacterized protein LOC100272863 [NAME] mays] | B4FR80 | Uncharacterized protein | chlororespiration | C | AT3G15840.1 | Symbols: PIFI | post-illumination chlorophyll fluorescence increase | C
9 | gi|195613650 | ATP synthase delta chain [NAME]] | B6SUX2 | ATP synthase delta chain | ATP synthesis coupled proton transport,photosynthetic electron transport in photosystem I and II, response to cold, defense response to bacterium | C | AT4G09650.1 | Symbols: ATPD | ATP synthase delta-subunit gene | C
46 | gi|77554379 | ATP synthase epsilon chain, putative [Oryza sativa Japonica Group] | Q2QTJ5 | ATP synthase epsilon chain, putative | plasma membrane ATP synthesis coupled proton transport | C,PM | ATCG00470.1 | Symbols: ATPE | ATP synthase epsilon chain | C
38 | gi|30575690 | NADP-malic enzyme [[NAME] mays] | Q84LP6 | Malic enzyme | malate metabolic process, protein homotetramerization, response to cadmium ion | C,PM | AT1G79750.1 | Symbols: ATNADP-ME4, NADP-ME4 | NADP-malic enzyme 4 | C
73 | gi|1170606 | Adenylate [NAME], chloroplastic  [[NAME] mays] | P43188 | Adenylate [NAME], chloroplastic | ATP + AMP = 2 ADP. | C | AT5G47840.1 | Symbols: AMK2 | adenosine monophosphate kinase | C
16 | gi|187830110 | filamentation temperature-sensitive H 2B [[NAME] mays] | B1P2H4 | Filamentation temperature-sensitive H 2B | thylakoid membrane organization, photoinhibition, protein catabolic process, proteolysis | C | [NAME] | Symbols: VAR2, FTSH2 | FtsH extracellular protease family. | C
7 | gi|195622012 | membrane-associated 30 [NAME] protein [[NAME] mays] | B6T6V3 | Membrane-associated 30 [NAME] protein | thylakoid membrane organization, vesicle organization | C | AT1G65260.1  PTAC4, VIPP1 | plastid transcriptionally active 4 | C
1 | gi|226497262 | ribosome recycling factor [[NAME] mays] | B6TQ52 | Ribosome recycling factor | chloroplast organization,plastid translation, embryo development, defense response to bacterium,defense response to fungus, incompatible interaction | C | AT3G63190.1 | Symbols: RRF, [NAME], cpRRF, AtcpRRF | ribosome recycling factor, chloroplast precursor | C
2 | gi|226497262 | ribosome recycling factor [[NAME] mays] | B6TQ52 | Ribosome recycling factor | chloroplast organization,plastid translation, embryo development, defense response to bacterium,defense response to fungus, incompatible interaction | C | AT3G63190.1 | Symbols: RRF, [NAME], cpRRF, AtcpRRF | ribosome recycling factor, chloroplast precursor | C
Defense response and ROS detoxification
4 | gi|226508836 | uncharacterized protein LOC100277322 [[NAME] mays] | B6TSX9 | Uncharacterized protein | tetrahydrobiopterin biosynthetic process | C | AT5G51110.1 | Symbols:  | Transcriptional coactivator/pterin dehydratase | C
53 | gi|226504576 | APx1 - Cytosolic Ascorbate Peroxidase [[NAME] mays] | B6UB73 | APx1-Cytosolic Ascorbate Peroxidase | hydrogen peroxide catabolic process, embryo development ending in seed dormancy, response to cadmium ion, heat andsalt stress | C, PM | AT1G07890.1 | Symbols: APX1, MEE6, CS1, [NAME], ATAPX01 | ascorbate peroxidase 1 | C, CM
52 | [NAME] | manganese superoxide dismutase (SOD-3) [[NAME] mays] | Q43273 | Superoxide dismutase | superoxide metabolic process, embryo development ending in seed dormancy, defense response to bacterium, response to zinc ion and salt stress | M | AT3G10920.1 | Symbols: MSD1, MEE33, ATMSD1 | manganese superoxide dismutase 1 | M
75 | gi|226530195 | uncharacterized protein LOC100272867 [Zea mays] | B4FR89 | Uncharacterized protein | L-ascorbic acid biosynthetic process, mannose biosynthetic process, response to salt stress | CM | AT2G45790.1 | Symbols: ATPMM, PMM | phosphomannomutase | CM
55 | gi|194702230 | unknown [[NAME] mays] | B4FSV6 | 6-phosphogluconate dehydrogenase, decarboxylating | pentose-phosphate shunt, response to salt stress | P | AT3G02360.2 | Symbols: | 6-phosphogluconate dehydrogenase family protein | C, P, CM
12 | gi|414591366 | 6-phosphogluconolactonase isoform 1 [Zea mays] | B6UAK0 | 6-phosphogluconolactonase | pentose-phosphate shunt,cellular response to redox state, defense response to bacterium and oomycetes | C, P, PM | AT5G24400.1 | Symbols: EMB2024, PGL3 | NagB/RpiA/CoA transferase-like superfamily protein | C, P
21 | gi|195626524 | 2-cys peroxiredoxin BAS1 [[NAME] mays] | B6TDA9 | 2-cys peroxiredoxin BAS1 | defense response to bacterium, response to cold | C, A | AT5G06290.1 | Symbols: 2-Cys Prx B, 2CPB | 2-cysteine peroxiredoxin B | C, M
20 | gi|195626524 | 2-cys peroxiredoxin BAS1 [[NAME] mays] | B6TDA9 | 2-cys peroxiredoxin BAS1 | defense response to bacterium, response to cold | C, A | AT5G06290.1 | Symbols: 2-Cys Prx B, 2CPB | 2-cysteine peroxiredoxin B | C, M
36 | gi|226505300 | [NAME] [[NAME] mays] | [NAME] | Peroxiredoxin-5 | oxidation-reduction process, response to cadmium ion | C, PM | [NAME] | Symbols: TPX1 | thioredoxin-dependent peroxidase 1 | C, CM
8 | gi|223943539 | unknown [[NAME] mays] | C0HFQ0 | Uncharacterized protein |  | C | AT5G65840.1 | Symbols:  | [NAME] superfamily protein | C
48 | gi|195624046 | thioredoxin X [[NAME] mays] | B6T9S0 | [NAME] | cell redox homeostasis, glycerol ether metabolic process | C | AT1G50320.1 | Symbols: ATHX, ATX, THX | thioredoxin X | C
63 | gi|66866417 | cysteine proteinase inhibitor [[NAME] mays subsp. parviglumis] | Q30KW7 | Cysteine proteinase inhibitor | cellular response to cold, heat, wounding and water deprivation | PM | AT3G12490.2 | Symbols: ATCYSB, ATCYS6, CYSB | cystatin B | CP, ER
56 | [NAME] | uncharacterized protein LOC100383635 [[NAME] mays] | Q5QJA2 | harpin binding protein 1 |  | C, N,PM | AT3G23400.1 | Symbols: FIB4 | Plastid-lipid associated protein PAP / fibrillin family protein | CN
22 | gi|226492878 | bifunctional 3-phosphoadenosine 5-phosphosulfate synthetase 2 [[NAME] mays] | B6SRJ5 | Bifunctional 3-phosphoadenosine 5-phosphosulfate synthetase 2 | sulfate assimilation |  | AT3G22890.1 | Symbols: APS1 | ATP sulfurylase 1 | C
37 | gi|226508814 | aspartate aminotransferase [[NAME] mays] | B6T9J4 | Aspartate aminotransferase | cellular amino acid metabolic process, response to cadmium ion and cold | C, A | AT4G31990.1 | Symbols: ASP5, AAT3, ATAAT1 | aspartate aminotransferase 5 | C
51 | gi|226532399 | peptide methionine sulfoxide reductase [[NAME] mays] | B6TNT5 | Peptide methionine sulfoxide reductase | cellular response to oxidative stress, response to karrikin | C | AT4G25130.1 | Symbols: PMSR4 | peptide met sulfoxide reductase 4 | C
RNA processing
3 | gi|363543235 | uncharacterized protein LOC100857032 [[NAME] mays] | C0PLI2 | Uncharacterized protein | regulation of transcription, DNA-dependent |  | AT4G38680.1 | Symbols: [NAME], CSDP2, [NAME], [NAME] | glycine rich protein 2 | N
13 | gi|195642478 | glycine-rich RNA-binding protein 2 [[NAME] mays] | B6TUC4 | Glycine-rich RNA-binding protein 2 |  |  | AT4G13850.1 | Symbols: ATGRP2, GR-RBP2, [NAME] | glycine-rich RNA-binding protein 2 | M
15 | gi|414884012 | hypothetical protein ZEAMMB73_274910 [[NAME] mays] |  |  |  |  | AT3G63140.1 | Symbols: CSP41A | chloroplast stem-loop binding protein of 41 kDa | C
5 | [NAME] | ribonucleoprotein A [[NAME] mays] | B6U471 | Ribonucleoprotein A | innate immune response, response to abscisic acid stimulus and cold | C | AT2G37220.1 | Symbols:  | RNA-binding (RRM/RBD/RNP motifs) family protein | C
19 | [NAME] | ribonucleoprotein A [[NAME] mays] | B6U471 | Ribonucleoprotein A | innate immune response, response to abscisic acid stimulus and cold | C | AT2G37220.1 | Symbols:  | RNA-binding (RRM/RBD/RNP motifs) family protein | C
10 | gi|162463757 | nucleic acid binding protein1 [[NAME] mays] | [NAME] | Nucleic acid-binding protein |  |  | AT4G24770.1 | Symbols: RBP31, ATRBP31, CP31, ATRBP33 | 31-kDa RNA binding protein | C
11 | gi|219363077 | uncharacterized protein LOC100217196 [[NAME] mays] | B4FLX0 | Uncharacterized protein |  |  | AT1G60000.1 | Symbols:  | RNA-binding (RRM/RBD/RNP motifs) family protein | CM
Protein synthesis and folding
41 | gi|413915954 | 40S ribosomal protein S16, mRNA [[NAME] mays] |  |  |  |  | AT5G55220.1 | Symbols:  | trigger factor type chaperone family protein | C
47 | gi|195604208 | 40S ribosomal protein S12 [Zea mays] | B6SGF1 | 40S ribosomal protein S12 | translation, response to cadmium ion and salt stress | CM, N | AT2G32060.1 | Symbols: | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | N, CP
61 | gi|195647902 | [NAME] amidotransferase, C subunit family [[NAME] mays] | B6U236 | Glutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial | regulation of translational fidelity | C,M | AT4G32915.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: regulation of translational fidelity | C
6 | gi|414585580 | CHL-CPN10 [[NAME] mays] | B6U478 | CHL-CPN10 | protein folding | C | AT3G60210.1 | Symbols: | GroES-like family protein | C, CP
33 | gi|195610950 | 50S ribosomal protein L12-1 [[NAME] mays] | B6SR22 | 50S ribosomal protein L12-1 | translation，defense response to bacterium | C | AT3G27850.1 | [NAME]: [NAME] | ribosomal protein L12-C | C
24 | gi|195659273 | 50S ribosomal protein L12-1 [[NAME] mays] | B6UIC1 | 50S ribosomal protein L12-1 | translation，defense response to bacterium | C | AT3G27850.1 | [NAME]: [NAME] | ribosomal protein L12-C | C
DNA damage response
71 | gi|414881042 | putative ubiquitin-conjugating enzyme family [[NAME] mays] | B6SIC6 | Ubiquitin-conjugating enzyme E2 N | [NAME] conjugation pathway |  | AT1G16890.2 | Symbols: UBC36, UBC13B | ubiquitin-conjugating enzyme 36 | N, CP
64 | gi|239985534 | thiamine thiazole synthase 2, chloroplastic precursor [[NAME] mays] | Q41739 | Thiamine thiazole synthase 2, chloroplastic | Involved in biosynthesis of the thiamine precursor thiazole, May have additional roles in adaptation to various stress conditions and in DNA damage tolerance | C | AT5G54770.1 | Symbols: THI1, TZ, THI4 | thiazole biosynthetic enzyme, chloroplast (ARA6) (THI1) (THI4) | C, M
57 | gi|239985530 | thiamine thiazole synthase 1, chloroplastic precursor [[NAME] mays] | Q41738 | Thiamine thiazole synthase 1, chloroplastic | Involved in biosynthesis of the thiamine precursor thiazole, May have additional roles in adaptation to various stress conditions and in DNA damage tolerance | C | AT5G54770.1 | Symbols: THI1, TZ, THI4 | thiazole biosynthetic enzyme, chloroplast (ARA6) (THI1) (THI4) | C, M
Cytoskeleton
34 | gi|162461296 | profilin-5 [[NAME] mays] | Q9FR39 | Profilin-5 | actin cytoskeleton organization | CM | AT5G56600.1 | Symbols: PFN3, PRF3 | profilin 3 | C, N, CP
45 | gi|162459533 | actin-depolymerizing factor 3 [[NAME] mays] | Q41764 | ADF-3 | Actin-depolymerizing protein | CM | AT5G59890.1 | Symbols: ADF4, ATADF4 | actin depolymerizing factor 4 | CP
Mitochondrial oxidative phosphorylation
25 | gi|226507194 | ATP synthase D chain, mitochondrial [[NAME] mays] | B4FS99 | ATP synthase D chain, mitochondrial | ATP synthesis coupled proton transport, response to salt stress | C, M,PM | AT3G52300.1 | Symbols: ATPQ | ATP synthase D chain, mitochondrial | C, M
72 | [NAME] | unknown [[NAME] mays] | C0PAG2 | Uncharacterized protein | respiratory electron transport chain | C, M | AT5G52840.1 | Symbols:  | NADH-ubiquinone oxidoreductase-related | CM
Miscellaneous and unknown
42 | gi|414882068 | putative alpha-L-arabinofuranosidase family protein [[NAME] mays] | C0P4P5 | Uncharacterized protein | L-arabinose metabolic process |  | AT3G10740.1 | Symbols: [NAME], [NAME], ARAF, ATASD1 | alpha-L-arabinofuranosidase 1 | A, V
76 | gi|195638660 | heme-binding protein 2 [[NAME] mays] | B6TNW5 | Heme-binding protein 2 |  |  | AT1G17100.1 | Symbols:  | SOUL heme-binding family protein | C, V
54 | gi|226532343 | SOUL heme-binding protein [[NAME] mays] | B6STS2 | SOUL heme-binding protein |  | C | AT3G10130.1 | Symbols:  | SOUL heme-binding family protein | C
65 | [NAME] | uncharacterized protein LOC100274379 [[NAME] mays] | B4G0K5 | Uncharacterized protein |  |  | AT2G39050.1 | Symbols:  | hydroxyproline-rich glycoprotein family protein | C, N
18 | gi|226493727 | uncharacterized protein LOC100275650 [[NAME] mays] | B6SX66 | Putative uncharacterized protein |  | C | AT4G21445.1 | Symbols:  | unknown protein | C
14 | gi|302819846 | hypothetical protein SELMODRAFT_133757 [Selaginella moellendorffii] | D8T7R2 | Putative uncharacterized protein |  | C | AT5G53490.3 | Symbols:  | Tetratricopeptide repeat (TPR)-like superfamily protein | C
49 | gi|226508942 | uncharacterized protein LOC100275367 [[NAME] mays] | B6SRZ0 | Putative uncharacterized protein |  |  | AT2G37400.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like superfamily protein | C
58 | gi|226528599 | uncharacterized protein LOC100276423 [[NAME] mays] | B6TAV3 | Putative uncharacterized protein |  |  | AT3G27050.1 | Symbols:  | unknown protein | ND
74 | gi|195635483 | membrane steroid-binding protein 1 [[NAME] mays] | B6TJC7 | Membrane steroid-binding protein 1 | negative regulation of cell growth | N, C, ER, PM, | AT5G52240.1 | Symbols: [NAME], ATMP1, AtMAPR5 | membrane steroid binding protein 1 | GA, ER, PM
62 | gi|223948417 | unknown [[NAME] mays] | C0P5M6 | Uncharacterized protein |  | C | AT2G24020.1 | Symbols:  | Uncharacterised BCR, YbaB family COG0718 | C
* C, chloroplast; M, mitochondria; CM, cytoplasmic matrix; N, nuclear; ER, endoreticulum; PM, plasma membrane; A, apoplast; P, peroxisome; GA,Golgi apparatus.