Spreadsheet: 38263379-4355-451c-bae7-95662b1c0bf3
Sheet: Sheet1

Species name | Phylum | Class | #PopSets | median sample size | U4 | V4 | Z4 | GC4 | GC4_pred | U2_CT | V2_CT | GC2_CT | GC2_CT_pred | U2_AG | V2_AG | GC2_AG | GC2_AG_pred | U4_transitions | V4_transitions | U4_transversions | V4_transversions | syn. nucl. div | 4f [NAME]. | genomicGC_4fold | highly tranlated GC_4fold | WatTheta(4fAT-GC) | r/m(Vos and Didelot) | Z4pred | Z4predExp | Z4-Z4pred | [NAME] | U 4f (Non_Singleton) | V 4f (Non_Singleton) | U 4f (Singleton) | V 4f (Singleton)
Acinetobacter baumannii | Proteobacteria | Gammaproteobacteria | 9 | 42 | 33 | 31 | 0.515625 | 0.175625 | 0.166756 | 15 | 3 | 0.431888 | 0.131977 | 5 | 8 | 0.23571 | 0.330408 | 28 | 21 | 5 | 10 | 0.0175557 | 0.0256534 | 30.6879 | 29.727 | 0.0272682 |  | 0.464342 | 0.435408 | 0.05128300000000002 | 0.08021699999999998 | 22 | 13 | 11 | 18
Actinobacillus capsulatus | Proteobacteria | Gammaproteobacteria | 3 | 16 | 9 | 7 | 0.5625 | 0.312387 | 0.261093 | 2 | 2 | 0.379248 | 0.379248 | 1 | 0 | 0.285505 | 0 | 8 | 6 | 1 | 1 | 0.00725276 | 0.0114843 |  |  | 0.00916067 |  | 0.495029 | 0.490304 | 0.067471 | 0.07219599999999998 | 8 | 7 | 1 | 0
Actinobacillus rossii | Proteobacteria | Gammaproteobacteria | 3 | 20 | 41 | 41 | 0.5 | 0.238759 | 0.238759 | 10 | 9 | 0.341367 | 0.318088 | 4 | 9 | 0.149116 | 0.282798 | 37 | 31 | 4 | 10 | 0.0219091 | 0.0340696 |  |  | 0.0368603 |  | 0.473533 | 0.451459 | 0.02646700000000002 | 0.048541 | 19 | 17 | 22 | 24
Actinomyces naeslundii | Proteobacteria | Gammaproteobacteria | 7 | 38 | 116 | 18 | 0.8656716417910447 | 0.928646 | 0.668822 | 37 | 2 | 0.966043 | 0.605955 | 7 | 0 | 0.989073 | 0 | 97 | 17 | 19 | 1 | 0.0324008 | 0.0480666 |  |  | 0.0417635 |  | 0.714388 | 0.795973 | 0.1512836417910447 | 0.06969864179104468 | 74 | 16 | 42 | 2
Actinomyces oris | Proteobacteria | Gammaproteobacteria | 6 | 75 | 212 | 11 | 0.9506726457399103 | 0.948725 | 0.489806 | 83 | 1 | 0.976841 | 0.33695 | 24 | 0 | 0.992668 | 0 | 189 | 9 | 23 | 2 | 0.0436643 | 0.0724334 |  |  | 0.0687715 |  | 0.962111 | 0.974097 | -0.01143835426008977 | -0.02342435426008971 | 125 | 8 | 87 | 3
Aeromonas cf. | Proteobacteria | Gammaproteobacteria | 1 | 10 | 12 | 8 | 0.6 | 0.646218 | 0.54909 | 3 | 3 | 0.554 | 0.554 | 5 | 0 | 0.531343 | 0 | 10 | 5 | 2 | 3 | 0.0419909 | 0.0636788 |  |  | 0.0594094 |  | 0.51974 | 0.535523 | 0.08026 | 0.064477 | 4 | 6 | 8 | 2
Aeromonas hydrophila | Proteobacteria | Gammaproteobacteria | 2 | 12.5 | 32 | 15 | 0.6808510638297872 | 0.807875 | 0.66342 | 4 | 8 | 0.605052 | 0.753935 | 4 | 3 | 0.705448 | 0.642377 | 25 | 12 | 7 | 3 | 0.0308183 | 0.0442074 | 81.4374 | 60.4292 | 0.0499869 |  | 0.544123 | 0.57858 | 0.1367280638297872 | 0.1022710638297872 | 9 | 8 | 23 | 7
Aeromonas punctata | Proteobacteria | Gammaproteobacteria | 2 | 16.5 | 35 | 10 | 0.7777777777777778 | 0.815743 | 0.558482 | 17 | 5 | 0.824656 | 0.580407 | 8 | 5 | 0.673661 | 0.563354 | 27 | 7 | 8 | 3 | 0.0470792 | 0.0594615 |  |  | 0.0494628 |  | 0.568979 | 0.616746 | 0.2087987777777778 | 0.1610317777777778 | 14 | 7 | 21 | 3
Aeromonas salmonicida | Proteobacteria | Gammaproteobacteria | 2 | 12 | 14 | 5 | 0.7368421052631579 | 0.687799 | 0.440344 | 4 | 4 | 0.642162 | 0.642162 | 7 | 0 | 0.515178 | 0 | 12 | 2 | 2 | 3 | 0.0266634 | 0.0369975 | 74.1782 | 59.1498 | 0.0336151 |  | 0.515705 | 0.529253 | 0.2211371052631579 | 0.2075891052631579 | 4 | 3 | 10 | 2
Aeromonas veronii | Proteobacteria | Gammaproteobacteria | 2 | 12.5 | 20 | 11 | 0.6451612903225806 | 0.729182 | 0.596918 | 8 | 4 | 0.74463 | 0.593156 | 8 | 4 | 0.532211 | 0.362594 | 18 | 10 | 2 | 1 | 0.0381743 | 0.053743 |  |  | 0.0496134 |  | 0.531281 | 0.556123 | 0.1138802903225806 | 0.0890382903225806 | 12 | 7 | 8 | 4
Aggregatibacter actinomycetemcomitans | Proteobacteria | Gammaproteobacteria | 8 | 82 | 65 | 62 | 0.5118110236220472 | 0.523063 | 0.511264 | 20 | 22 | 0.457753 | 0.481488 | 5 | 5 | 0.100375 | 0.100375 | 51 | 52 | 14 | 10 | 0.0121169 | 0.0172594 |  |  | 0.0393579 |  | 0.501082 | 0.502065 | 0.0107290236220472 | 0.00974602362204724 | 34 | 32 | 31 | 30
Anabaena lemmermannii | Cyanobacteria | Nostocales | 4 | 14 | 5 | 13 | 0.2777777777777778 | 0.258323 | 0.475222 | 7 | 2 | 0.538462 | 0.25 | 4 | 3 | 0.192982 | 0.152074 | 4 | 6 | 1 | 7 | 0.0331914 | 0.03971 |  |  | 0.0269994 |  | 0.474633 | 0.45352 | -0.1968552222222222 | -0.1757422222222222 | 4 | 11 | 1 | 2
Anaplasma marginale | Proteobacteria | Alphaproteobacteria | 5 | 15 | 7 | 10 | 0.4117647058823529 | 0.414797 | 0.503126 | 0 | 1 | 0.494946 | 1 | 1 | 0 | 0.543514 | 0 | 7 | 10 | 0 | 0 | 0.00925058 | 0.0166025 | 52.6811 | 54.5254 | 0.0136406 |  | 0.497251 | 0.494674 | -0.08548629411764708 | -0.08290929411764708 | 4 | 6 | 3 | 4
Anaplasma phagocytophilum | Proteobacteria | Alphaproteobacteria | 8 | 12 | 98 | 106 | 0.4803921568627451 | 0.275648 | 0.291589 | 28 | 38 | 0.297755 | 0.365254 | 27 | 27 | 0.430815 | 0.430815 | 81 | 88 | 17 | 18 | 0.0397515 | 0.0455878 | 38.1712 | 42.3077 | 0.0326626 |  | 0.47468 | 0.453836 | 0.005712156862745121 | 0.0265561568627451 | 56 | 61 | 42 | 45
Aster yellows | [NAME] | Mollicutes | 1 | 20 | 20 | 25 | 0.4444444444444444 | 0.240238 | 0.283284 | 8 | 7 | 0.151807 | 0.135401 | 1 | 4 | 0.0401961 | 0.143482 | 16 | 23 | 4 | 2 | 0.0541258 | 0.0677192 | 19.6914 | 20.2578 | 0.0604006 |  | 0.44478 | 0.406025 | -0.0003355555555555889 | 0.03841944444444439 | 12 | 13 | 8 | 12
Avibacterium paragallinarum | Proteobacteria | Gammaproteobacteria | 1 | 11 | 7 | 10 | 0.4117647058823529 | 0.133481 | 0.180369 | 7 | 5 | 0.364954 | 0.291028 | 0 | 1 | 0.121908 | 1 | 5 | 10 | 2 | 0 | 0.0396077 | 0.0490938 |  |  | 0.0283126 |  | 0.424655 | 0.373108 | -0.01289029411764708 | 0.03865670588235293 | 6 | 10 | 1 | 0
Bacillus atrophaeus | Firmicutes | [NAME] | 4 | 9 | 4 | 8 | 0.3333333333333333 | 0.251656 | 0.402116 | 3 | 6 | 0.571429 | 0.727273 | 0 | 0 | 0.204117 | -1 | 4 | 4 | 0 | 4 | 0.0129842 | 0.0165881 |  |  | 0.0126329 |  | 0.491005 | 0.482676 | -0.1576716666666667 | -0.1493426666666667 | 1 | 1 | 3 | 7
Bacillus cereus | Firmicutes | [NAME] | 24 | 14 | 73 | 109 | 0.4010989010989011 | 0.173578 | 0.238742 | 64 | 35 | 0.426849 | 0.28941 | 26 | 37 | 0.192721 | 0.253581 | 58 | 94 | 15 | 15 | 0.0370953 | 0.0461208 | 26.1192 | 26.4267 | 0.0371537 | 0.7 | 0.444898 | 0.403676 | -0.0437990989010989 | -0.002577098901098862 | 36 | 61 | 37 | 48
Bacillus licheniformis | Firmicutes | [NAME] | 2 | 28.5 | 8 | 5 | 0.6153846153846154 | 0.39141 | 0.286715 | 4 | 4 | 0.44809 | 0.44809 | 8 | 4 | 0.34055 | 0.205219 | 7 | 4 | 1 | 1 | 0.0607267 | 0.0615078 | 51.7691 | 36.3205 | 0.0300977 |  | 0.483442 | 0.470709 | 0.1319426153846154 | 0.1446756153846154 | 8 | 3 | 0 | 2
Bacillus simplex | Firmicutes | [NAME] | 6 | 79 | 69 | 59 | 0.5390625 | 0.34479 | 0.310328 | 25 | 17 | 0.38069 | 0.294779 | 14 | 30 | 0.257369 | 0.426156 | 48 | 39 | 21 | 20 | 0.0400474 | 0.060413 |  |  | 0.0386432 |  | 0.470662 | 0.450173 | 0.06840049999999998 | 0.08888950000000001 | 53 | 43 | 16 | 16
Bacillus subtilis | Firmicutes | [NAME] | 42 | 13 | 319 | 291 | 0.5229508196721312 | 0.412202 | 0.390136 | 109 | 108 | 0.425119 | 0.422868 | 66 | 80 | 0.317278 | 0.360328 | 248 | 208 | 71 | 83 | 0.0427638 | 0.0610818 | 44.5223 | 33.2639 | 0.0401288 |  | 0.489346 | 0.480774 | 0.03360481967213119 | 0.04217681967213122 | 292 | 270 | 27 | 21
Bacillus thuringiensis | Firmicutes | [NAME] | 16 | 17 | 58 | 116 | 0.3333333333333333 | 0.183368 | 0.309909 | 42 | 39 | 0.341664 | 0.325196 | 12 | 20 | 0.156221 | 0.235809 | 50 | 97 | 8 | 19 | 0.0444199 | 0.0588569 | 26.1585 | 26.7986 | 0.0461525 | 0.8 | 0.433084 | 0.387035 | -0.09975066666666671 | -0.0537016666666667 | 48 | 90 | 10 | 26
Bacillus velezensis | Firmicutes | [NAME] | 5 | 9 | 45 | 24 | 0.6521739130434783 | 0.466082 | 0.317672 | 19 | 8 | 0.56275 | 0.351451 | 1 | 6 | 0.278607 | 0.698545 | 39 | 17 | 6 | 7 | 0.0321457 | 0.0511182 |  |  | 0.0341544 |  | 0.497028 | 0.494519 | 0.1551459130434782 | 0.1576549130434783 | 26 | 20 | 19 | 4
Bacteroides fragilis | Bacteroidetes/chlorobi | Bacteroidetes | 2 | 19 | 4 | 7 | 0.3636363636363636 | 0.459913 | 0.598428 | 2 | 4 | 0.408269 | 0.579817 | 1 | 0 | 0.172619 | 0 | 2 | 7 | 2 | 0 | 0.0411039 | 0.0431899 | 45.6179 | 35.7189 | 0.0373898 |  | 0.496398 | 0.493346 | -0.1327616363636364 | -0.1297096363636364 | 2 | 4 | 2 | 3
Bordetella bronchiseptica | Proteobacteria | [NAME] | 5 | 72 | 18 | 15 | 0.5454545454545454 | 0.89725 | 0.879183 | 8 | 6 | 0.703071 | 0.63975 | 6 | 2 | 0.85666 | 0.66579 | 17 | 11 | 1 | 4 | 0.0155586 | 0.0151701 | 88.5809 | 81.1981 | 0.0100988 |  | 0.544403 | 0.579907 | 0.001051545454545444 | -0.03445245454545454 | 14 | 14 | 4 | 1
Borrelia burgdorferi | Spirochaetes | Spirochaetes | 18 | 14 | 70 | 72 | 0.4929577464788732 | 0.200077 | 0.204624 | 26 | 37 | 0.203226 | 0.266308 | 35 | 33 | 0.243134 | 0.23247 | 62 | 60 | 8 | 12 | 0.0203274 | 0.0260993 | 20.6212 | 21.3638 | 0.0256068 |  | 0.475587 | 0.454519 | 0.01737074647887327 | 0.03843874647887324 | 51 | 48 | 19 | 24
Borrelia garinii | Spirochaetes | Spirochaetes | 4 | 15.5 | 12 | 25 | 0.3243243243243243 | 0.120113 | 0.221424 | 7 | 13 | 0.308704 | 0.45335 | 7 | 7 | 0.144944 | 0.144944 | 10 | 23 | 2 | 2 | 0.0535712 | 0.0513018 | 19.8842 | 21.4018 | 0.0397823 |  | 0.395547 | 0.330679 | -0.07122267567567564 | -0.006354675675675658 | 9 | 13 | 3 | 12
Borrelia hermsii | Spirochaetes | Spirochaetes | 4 | 30 | 19 | 25 | 0.4318181818181818 | 0.157314 | 0.197196 | 7 | 5 | 0.177547 | 0.133596 | 5 | 8 | 0.258151 | 0.357646 | 15 | 22 | 4 | 3 | 0.01982 | 0.0298169 | 21.6928 | 23.7695 | 0.0160939 |  | 0.454462 | 0.418798 | -0.02264381818181815 | 0.01302018181818182 | 19 | 24 | 0 | 1
Bradyrhizobium canariense | Proteobacteria | Alphaproteobacteria | 6 | 9.5 | 54 | 8 | 0.8709677419354839 | 0.907709 | 0.593014 | 20 | 6 | 0.819149 | 0.57606 | 12 | 1 | 0.792033 | 0.240913 | 46 | 6 | 8 | 2 | 0.0397395 | 0.0620354 |  |  | 0.0364051 |  | 0.669119 | 0.749432 | 0.2018487419354839 | 0.1215357419354839 | 33 | 6 | 21 | 2
Bradyrhizobium elkanii | Proteobacteria | Alphaproteobacteria | 3 | 15 | 19 | 9 | 0.6785714285714286 | 0.919637 | 0.844253 | 13 | 5 | 0.807235 | 0.616952 | 4 | 2 | 0.841424 | 0.726257 | 15 | 8 | 4 | 1 | 0.033127 | 0.0382471 |  |  | 0.0255108 |  | 0.617064 | 0.686757 | 0.06150742857142866 | -0.008185571428571348 | 14 | 7 | 5 | 2
Bradyrhizobium japonicum | Proteobacteria | Alphaproteobacteria | 10 | 14.5 | 34 | 33 | 0.5074626865671642 | 0.851157 | 0.847335 | 22 | 11 | 0.726261 | 0.570181 | 6 | 12 | 0.779317 | 0.875973 | 30 | 26 | 4 | 7 | 0.0204336 | 0.02827 | 82.4175 | 85.7716 | 0.0234259 |  | 0.539852 | 0.572377 | -0.0323893134328358 | -0.06491431343283582 | 8 | 14 | 26 | 19
Bradyrhizobium liaoningense | Proteobacteria | Alphaproteobacteria | 4 | 13 | 15 | 9 | 0.625 | 0.929338 | 0.887528 | 10 | 3 | 0.837436 | 0.607138 | 5 | 2 | 0.807692 | 0.626866 | 13 | 7 | 2 | 2 | 0.02872 | 0.0367789 |  |  | 0.0178786 |  | 0.62657 | 0.69921 | -0.00156999999999996 | -0.07421 | 13 | 9 | 2 | 0
Bradyrhizobium yuanmingense | Proteobacteria | Alphaproteobacteria | 4 | 29 | 22 | 8 | 0.7333333333333333 | 0.942741 | 0.856879 | 13 | 10 | 0.810601 | 0.767019 | 8 | 7 | 0.835159 | 0.815945 | 16 | 5 | 6 | 3 | 0.0255815 | 0.0314299 |  |  | 0.0173438 |  | 0.662219 | 0.742672 | 0.07111433333333328 | -0.009338666666666717 | 11 | 5 | 11 | 3
Buchnera aphidicola | Proteobacteria | Gammaproteobacteria | 20 | 21 | 10 | 21 | 0.3225806451612903 | 0.110479 | 0.206867 | 4 | 5 | 0.112242 | 0.136473 | 1 | 3 | 0.080516 | 0.208046 | 10 | 19 | 0 | 2 | 0.00311449 | 0.00443135 | 13.0094 | 13.1658 | 0.00591281 |  | 0.491066 | 0.48254 | -0.1684853548387097 | -0.1599593548387097 | 3 | 7 | 7 | 14
Burkholderia cenocepacia | Proteobacteria | [NAME] | 2 | 27 | 12 | 8 | 0.6 | 0.924549 | 0.890938 | 4 | 1 | 0.811943 | 0.519089 | 10 | 6 | 0.748145 | 0.640588 | 12 | 8 | 0 | 0 | 0.0446166 | 0.05575 | 87.2707 | 78.4577 | 0.0288697 |  | 0.721348 | 0.802239 | -0.121348 | -0.2022390000000001 | 3 | 7 | 9 | 1
Campylobacter coli | Proteobacteria | delta/epsilon subdivisions | 2 | 19.5 | 11 | 10 | 0.5238095238095238 | 0.146472 | 0.134953 | 2 | 3 | 0.20354 | 0.277108 | 0 | 3 | 0.0612992 | 1 | 10 | 7 | 1 | 3 | 0.0517834 | 0.0743461 |  |  | 0.0422049 |  | 0.371485 | 0.30218 | 0.1523245238095238 | 0.2216295238095238 | 9 | 6 | 2 | 4
Campylobacter jejuni | Proteobacteria | delta/epsilon subdivisions | 6 | 20 | 24 | 34 | 0.4137931034482759 | 0.166896 | 0.221063 | 9 | 4 | 0.126724 | 0.060587 | 4 | 1 | 0.09755 | 0.0263126 | 21 | 33 | 3 | 1 | 0.0262249 | 0.0431118 | 19.5263 | 18.6639 | 0.036611 | 2.2 | 0.442054 | 0.399313 | -0.02826089655172415 | 0.01448010344827588 | 20 | 26 | 4 | 8
Campylobacter upsaliensis | Proteobacteria | delta/epsilon subdivisions | 2 | 41.5 | 8 | 7 | 0.5333333333333333 | 0.170369 | 0.152317 | 0 | 2 | 0.0883721 | 1 | 1 | 2 | 0.364304 | 0.534052 | 8 | 5 | 0 | 2 | 0.0208338 | 0.0356156 |  |  | 0.0377814 |  | 0.447386 | 0.408281 | 0.08594733333333332 | 0.1250523333333333 | 4 | 3 | 4 | 4
Candidatus Hamiltonella | Proteobacteria | Gammaproteobacteria | 10 | 23 | 47 | 27 | 0.6351351351351351 | 0.446843 | 0.316967 | 11 | 8 | 0.213173 | 0.164605 | 4 | 6 | 0.207695 | 0.282234 | 31 | 20 | 16 | 7 | 0.0116411 | 0.0198879 |  |  | 0.0192783 |  | 0.497754 | 0.495687 | 0.1373811351351351 | 0.1394481351351351 | 20 | 12 | 27 | 15
Candidatus Pelagibacter | Proteobacteria | Gammaproteobacteria | 7 | 9 | 37 | 60 | 0.3814432989690721 | 0.0953109 | 0.145913 | 26 | 23 | 0.270551 | 0.247045 | 13 | 24 | 0.146493 | 0.240623 | 33 | 56 | 4 | 4 | 0.0368661 | 0.0502634 | 17.2729 | 16.3999 | 0.0339496 |  | 0.386875 | 0.320452 | -0.005431701030927882 | 0.06099129896907213 | 26 | 33 | 11 | 27
Chlamydia trachomatis | Chlamydiae/verrucomicrobia | Chlamydiae | 50 | 16 | 269 | 273 | 0.496309963099631 | 0.300792 | 0.303905 | 75 | 93 | 0.324415 | 0.373216 | 35 | 39 | 0.298082 | 0.321206 | 213 | 229 | 56 | 44 | 0.0145213 | 0.0206421 | 34.4895 | 33.6725 | 0.0152887 | 0.3 | 0.490174 | 0.481208 | 0.006135963099630992 | 0.01510196309963097 | 224 | 219 | 45 | 54
Chlamydophila pecorum | Chlamydiae/verrucomicrobia | Chlamydiae | 9 | 18 | 8 | 12 | 0.4 | 0.209605 | 0.284583 | 4 | 0 | 0.335787 | 0 | 3 | 12 | 0.228612 | 0.54243 | 7 | 11 | 1 | 1 | 0.0147777 | 0.0102809 |  |  | 0.00798444 |  | 0.490828 | 0.482197 | -0.09082799999999996 | -0.08219699999999996 | 4 | 6 | 4 | 6
Clostridium botulinum | Firmicutes | Clostridia | 7 | 11 | 27 | 38 | 0.4153846153846154 | 0.0501264 | 0.0691364 | 19 | 32 | 0.242343 | 0.350105 | 27 | 37 | 0.119318 | 0.15659 | 25 | 31 | 2 | 7 | 0.0555654 | 0.0571793 | 16.4987 | 15.8002 | 0.0448898 |  | 0.178784 | 0.115064 | 0.2366006153846154 | 0.3003206153846154 | 21 | 9 | 6 | 29
Clostridium difficile | Firmicutes | Clostridia | 11 | 28 | 15 | 49 | 0.234375 | 0.0651126 | 0.185346 | 20 | 36 | 0.184413 | 0.289268 | 13 | 26 | 0.16759 | 0.287069 | 13 | 41 | 2 | 8 | 0.0332288 | 0.0346027 | 17.7639 | 16.4703 | 0.0267453 | 0.2 | 0.342572 | 0.262485 | -0.108197 | -0.02811000000000002 | 14 | 30 | 1 | 19
Clostridium perfringens | Firmicutes | Clostridia | 17 | 29 | 37 | 115 | 0.243421052631579 | 0.050165 | 0.141006 | 72 | 69 | 0.21579 | 0.208675 | 41 | 56 | 0.264138 | 0.328982 | 32 | 93 | 5 | 22 | 0.0235028 | 0.0237525 | 16.3674 | 20.7377 | 0.0222323 |  | 0.361672 | 0.284878 | -0.118250947368421 | -0.04145694736842107 | 27 | 68 | 10 | 47
Crocosphaera watsonii | Cyanobacteria | Chroococcales | 2 | 29.5 | 5 | 6 | 0.4545454545454545 | 0.381884 | 0.425744 | 2 | 1 | 0.398983 | 0.249206 | 2 | 1 | 0.259175 | 0.148881 | 5 | 6 | 0 | 0 | 0.00529668 | 0.0047203 |  |  | 0.017256 |  | 0.498686 | 0.497401 | -0.04414054545454549 | -0.04285554545454545 | 1 | 0 | 4 | 6
Cronobacter malonaticus | Proteobacteria | Gammaproteobacteria | 1 | 11 | 11 | 13 | 0.4583333333333333 | 0.81173 | 0.835943 | 5 | 5 | 0.593692 | 0.593692 | 4 | 1 | 0.528462 | 0.21886 | 11 | 13 | 0 | 0 | 0.0229558 | 0.0331965 |  |  | 0.0264323 |  | 0.530746 | 0.556171 | -0.07241266666666674 | -0.09783766666666666 | 6 | 9 | 5 | 4
Cronobacter sakazakii | Proteobacteria | Gammaproteobacteria | 5 | 25 | 100 | 40 | 0.7142857142857143 | 0.796718 | 0.610548 | 42 | 40 | 0.553722 | 0.541636 | 23 | 17 | 0.534812 | 0.459388 | 85 | 36 | 15 | 4 | 0.0364745 | 0.0462596 | 69.0833 | 52.7338 | 0.0382484 |  | 0.548186 | 0.584067 | 0.1660997142857144 | 0.1302187142857143 | 50 | 33 | 50 | 7
Cylindrospermopsis raciborskii | Cyanobacteria | Nostocales | 5 | 19 | 14 | 12 | 0.5384615384615384 | 0.312753 | 0.280611 | 3 | 2 | 0.571113 | 0.470267 | 4 | 7 | 0.161677 | 0.252336 | 14 | 9 | 0 | 3 | 0.019507 | 0.0224062 |  |  | 0.0302536 |  | 0.490129 | 0.481219 | 0.04833253846153845 | 0.05724253846153843 | 7 | 4 | 7 | 8
Dialister micraerophilus | Firmicutes | Clostridia | 1 | 13 | 3 | 10 | 0.2307692307692308 | 0.19709 | 0.450015 | 2 | 1 | 0.269151 | 0.155502 | 1 | 1 | 0.18932 | 0.18932 | 2 | 7 | 1 | 3 | 0.0192317 | 0.0247223 |  |  | 0.0361139 |  | 0.477919 | 0.458757 | -0.2471497692307692 | -0.2279877692307692 | 0 | 1 | 3 | 9
Dickeya dadantii | Proteobacteria | Gammaproteobacteria | 1 | 30 | 13 | 4 | 0.7647058823529411 | 0.779026 | 0.520325 | 4 | 2 | 0.484 | 0.319261 | 2 | 5 | 0.425 | 0.648855 | 12 | 4 | 1 | 0 | 0.0402541 | 0.0444531 |  |  | 0.0510512 |  | 0.543031 | 0.575691 | 0.2216748823529411 | 0.1890148823529412 | 5 | 1 | 8 | 3
Dickeya zeae | Proteobacteria | Gammaproteobacteria | 1 | 43 | 8 | 10 | 0.4444444444444444 | 0.558404 | 0.612499 | 4 | 4 | 0.411163 | 0.411163 | 3 | 1 | 0.52093 | 0.266033 | 5 | 7 | 3 | 3 | 0.0643003 | 0.0938538 |  |  | 0.0472747 |  | 0.514576 | 0.524058 | -0.07013155555555561 | -0.0796135555555556 | 6 | 7 | 2 | 3
Ehrlichia ruminantium | Proteobacteria | Alphaproteobacteria | 7 | 12 | 23 | 55 | 0.2948717948717949 | 0.098907 | 0.207907 | 17 | 39 | 0.157202 | 0.299675 | 9 | 11 | 0.218019 | 0.254154 | 19 | 49 | 4 | 6 | 0.0380116 | 0.0431344 | 18.3811 | 21.9458 | 0.040357 |  | 0.396116 | 0.330221 | -0.1012442051282051 | -0.03534920512820511 | 10 | 10 | 13 | 45
Enterobacter cloacae | Proteobacteria | Gammaproteobacteria | 1 | 19 | 34 | 17 | 0.6666666666666666 | 0.748808 | 0.598475 | 13 | 5 | 0.855124 | 0.694205 | 10 | 7 | 0.42431 | 0.34034 | 27 | 16 | 7 | 1 | 0.0641297 | 0.0847295 |  |  | 0.0740702 |  | 0.563137 | 0.604284 | 0.1035296666666666 | 0.06238266666666659 | 13 | 13 | 21 | 4
Enterococcus faecalis | Firmicutes | [NAME] | 1 | 31 | 7 | 4 | 0.6363636363636364 | 0.347797 | 0.233554 | 1 | 0 | 0.172192 | 0 | 0 | 1 | 0.194697 | 1 | 6 | 3 | 1 | 1 | 0.0226244 | 0.0371715 | 30.5276 | 26.183 | 0.0257332 | 0.6 | 0.485663 | 0.473653 | 0.1507006363636363 | 0.1627106363636364 | 3 | 3 | 4 | 1
Enterococcus faecium | Firmicutes | [NAME] | 5 | 13 | 38 | 26 | 0.59375 | 0.292224 | 0.22027 | 13 | 6 | 0.403642 | 0.238031 | 7 | 8 | 0.141409 | 0.15841 | 31 | 18 | 7 | 8 | 0.0499941 | 0.0677624 |  |  | 0.0511924 | 1.1 | 0.466444 | 0.441184 | 0.127306 | 0.152566 | 29 | 19 | 9 | 7
Erwinia chrysanthemi | Proteobacteria | Gammaproteobacteria | 1 | 17 | 7 | 9 | 0.4375 | 0.602273 | 0.660665 | 0 | 3 | 0.336471 | 1 | 0 | 2 | 0.414118 | 1 | 6 | 5 | 1 | 4 | 0.0435759 | 0.0576537 |  |  | 0.0537808 |  | 0.512645 | 0.52279 | -0.07514500000000002 | -0.08528999999999998 | 6 | 3 | 1 | 6
Escherichia coli | Proteobacteria | Gammaproteobacteria | 147 | 24 | 1223 | 647 | 0.6540106951871658 | 0.587759 | 0.429962 | 357 | 200 | 0.457405 | 0.320775 | 174 | 144 | 0.375035 | 0.33183 | 1012 | 519 | 211 | 128 | 0.0245207 | 0.0358559 | 55.5209 | 50.8119 | 0.0284272 | 0.7 | 0.507191 | 0.51339 | 0.1468196951871659 | 0.1406206951871658 | 819 | 471 | 404 | 176
Flavobacterium psychrophilum | Bacteroidetes/chlorobi | Bacteroidetes | 9 | 50 | 18 | 22 | 0.45 | 0.205407 | 0.240094 | 8 | 7 | 0.331871 | 0.302955 | 3 | 3 | 0.123578 | 0.123578 | 14 | 19 | 4 | 3 | 0.00890932 | 0.0132578 | 24.5472 | 22.4045 | 0.00691208 | 63.6 | 0.485079 | 0.471593 | -0.03507899999999997 | -0.02159299999999997 | 16 | 20 | 2 | 2
Francisella tularensis | Proteobacteria | Gammaproteobacteria | 10 | 14 | 9 | 2 | 0.8181818181818182 | 0.172053 | 0.044141 | 7 | 1 | 0.169411 | 0.0283129 | 0 | 0 | 0.270354 | -1 | 8 | 2 | 1 | 0 | 0.00343503 | 0.00477628 | 21.7394 | 22.1223 | 0.00330365 |  | 0.49473 | 0.489624 | 0.3234518181818182 | 0.3285578181818182 | 9 | 2 | 0 | 0
Gallibacterium melopsittaci | Proteobacteria | Gammaproteobacteria | 3 | 9 | 10 | 8 | 0.5555555555555556 | 0.235422 | 0.197643 | 1 | 2 | 0.17445 | 0.297075 | 2 | 5 | 0.187879 | 0.36643 | 8 | 8 | 2 | 0 | 0.00809619 | 0.0118899 |  |  | 0.0117289 |  | 0.492862 | 0.486127 | 0.06269355555555556 | 0.0694285555555556 | 4 | 6 | 6 | 2
Haemophilus influenzae | Proteobacteria | Gammaproteobacteria | 8 | 37 | 58 | 65 | 0.4715447154471545 | 0.242236 | 0.263761 | 33 | 18 | 0.273827 | 0.170593 | 6 | 11 | 0.106591 | 0.179475 | 49 | 46 | 9 | 19 | 0.0476519 | 0.0682908 | 29.0896 | 25.8077 | 0.0496294 | 3.7 | 0.439314 | 0.399391 | 0.0322307154471545 | 0.07215371544715449 | 48 | 50 | 10 | 15
Haemophilus parasuis | Proteobacteria | Gammaproteobacteria | 7 | 131 | 52 | 67 | 0.4369747899159664 | 0.221626 | 0.268398 | 35 | 20 | 0.573137 | 0.434146 | 6 | 9 | 0.127741 | 0.180108 | 49 | 54 | 3 | 13 | 0.038984 | 0.0489682 | 34.174 | 27.8423 | 0.0309339 | 2.7 | 0.439316 | 0.40001 | -0.002341210084033596 | 0.03696478991596641 | 39 | 53 | 13 | 14
Helicobacter pylori | Proteobacteria | delta/epsilon subdivisions | 40 | 18 | 482 | 333 | 0.5914110429447853 | 0.484135 | 0.393342 | 195 | 176 | 0.329564 | 0.307321 | 123 | 170 | 0.236164 | 0.299389 | 454 | 298 | 28 | 35 | 0.059378 | 0.0781523 | 42.0685 | 43.4695 | 0.0723855 | 13.6 | 0.497259 | 0.495184 | 0.0941520429447853 | 0.09622704294478529 | 307 | 224 | 175 | 109
Klebsiella pneumoniae | Proteobacteria | Gammaproteobacteria | 12 | 15.5 | 70 | 31 | 0.693069306930693 | 0.704576 | 0.513665 | 11 | 5 | 0.582066 | 0.387651 | 10 | 5 | 0.549079 | 0.378434 | 55 | 25 | 15 | 6 | 0.0155027 | 0.0228176 | 71.0249 | 55.1239 | 0.0249039 | 0.3 | 0.511312 | 0.521526 | 0.181757306930693 | 0.171543306930693 | 29 | 8 | 41 | 23
Lactobacillus casei | Firmicutes | [NAME] | 17 | 12 | 107 | 70 | 0.6045197740112994 | 0.562433 | 0.456785 | 17 | 19 | 0.376272 | 0.402712 | 12 | 21 | 0.361009 | 0.497157 | 92 | 54 | 15 | 16 | 0.0212276 | 0.0325121 | 48.1535 | 47.9108 | 0.0305636 | 0.1 | 0.503952 | 0.507479 | 0.1005677740112995 | 0.0970407740112994 | 61 | 47 | 46 | 23
Lactobacillus rhamnosus | Firmicutes | [NAME] | 1 | 20 | 34 | 22 | 0.6071428571428571 | 0.684894 | 0.584443 | 7 | 4 | 0.222222 | 0.140351 | 11 | 1 | 0.607 | 0.123124 | 29 | 18 | 5 | 4 | 0.0581276 | 0.0887417 |  |  | 0.0545005 |  | 0.544225 | 0.574423 | 0.06291785714285714 | 0.03271985714285708 | 28 | 18 | 6 | 4
Lactobacillus sakei | Firmicutes | [NAME] | 1 | 10 | 2 | 9 | 0.1818181818181818 | 0.272968 | 0.628191 | 2 | 4 | 0.182006 | 0.307962 | 1 | 0 | 0.24895 | 0 | 2 | 7 | 0 | 2 | 0.0153376 | 0.0202981 | 37.7374 | 28.0045 | 0.0173587 |  | 0.489384 | 0.479657 | -0.3075658181818182 | -0.2978388181818182 | 2 | 7 | 0 | 2
Lactobacillus salivarius | Firmicutes | [NAME] | 1 | 32 | 8 | 10 | 0.4444444444444444 | 0.0853476 | 0.104456 | 2 | 2 | 0.213988 | 0.213988 | 6 | 0 | 0.218262 | 0 | 8 | 10 | 0 | 0 | 0.0235115 | 0.0249973 | 20.9071 | 23.0339 | 0.0162126 |  | 0.418595 | 0.362072 | 0.02584944444444442 | 0.08237244444444441 | 8 | 7 | 0 | 3
Lactococcus lactis | Firmicutes | [NAME] | 2 | 88.5 | 8 | 10 | 0.4444444444444444 | 0.174595 | 0.209116 | 2 | 1 | 0.546894 | 0.376362 | 2 | 8 | 0.0496559 | 0.172871 | 6 | 7 | 2 | 3 | 0.0258152 | 0.0338021 | 26.5065 | 25.8358 | 0.0231946 |  | 0.445416 | 0.406168 | -0.0009715555555555588 | 0.03827644444444445 | 4 | 4 | 4 | 6
Legionella pneumophila | Proteobacteria | Gammaproteobacteria | 38 | 31 | 109 | 152 | 0.417624521072797 | 0.307075 | 0.381945 | 37 | 31 | 0.320554 | 0.283299 | 27 | 31 | 0.280768 | 0.30949 | 90 | 124 | 19 | 28 | 0.0308728 | 0.043844 | 33.1412 | 27.894 | 0.0389078 | 0.9 | 0.476864 | 0.458327 | -0.05923947892720305 | -0.04070247892720302 | 64 | 100 | 45 | 52
[NAME] | Spirochaetes | Spirochaetes | 1 | 22 | 54 | 31 | 0.6352941176470588 | 0.472701 | 0.339774 | 23 | 14 | 0.512143 | 0.389871 | 12 | 16 | 0.34 | 0.407186 | 48 | 28 | 6 | 3 | 0.0674063 | 0.0861665 | 40.991 | 43.457 | 0.108717 |  | 0.494521 | 0.490553 | 0.1407731176470588 | 0.1447411176470588 | 24 | 4 | 30 | 27
Leptospira interrogans | Spirochaetes | Spirochaetes | 6 | 11 | 28 | 24 | 0.5384615384615384 | 0.290729 | 0.259994 | 13 | 7 | 0.307765 | 0.193157 | 7 | 3 | 0.239604 | 0.118977 | 26 | 22 | 2 | 2 | 0.0158805 | 0.0211074 | 29.998 | 34.4062 | 0.0211564 | 0.02 | 0.490611 | 0.482038 | 0.04785053846153842 | 0.05642353846153841 | 23 | 10 | 5 | 14
[NAME] | Spirochaetes | Spirochaetes | 1 | 21 | 15 | 13 | 0.5357142857142857 | 0.36037 | 0.328085 | 2 | 3 | 0.327957 | 0.422633 | 3 | 1 | 0.372375 | 0.165115 | 12 | 10 | 3 | 3 | 0.0203123 | 0.0291356 |  |  | 0.0366392 |  | 0.490799 | 0.482684 | 0.04491528571428571 | 0.0530302857142857 | 8 | 8 | 7 | 5
[NAME] innocua | Firmicutes | [NAME] | 8 | 33 | 44 | 53 | 0.4536082474226804 | 0.293863 | 0.333901 | 13 | 18 | 0.281161 | 0.35131 | 6 | 6 | 0.171133 | 0.171133 | 36 | 41 | 8 | 12 | 0.0232015 | 0.0367991 | 28.8141 | 25.4626 | 0.0416075 |  | 0.47863 | 0.461046 | -0.02502175257731959 | -0.007437752577319601 | 24 | 18 | 20 | 35
[NAME] monocytogenes | Firmicutes | [NAME] | 148 | 40 | 1051 | 1084 | 0.4922716627634661 | 0.285521 | 0.291869 | 422 | 372 | 0.327347 | 0.300205 | 141 | 201 | 0.151513 | 0.202905 | 872 | 871 | 179 | 213 | 0.0291373 | 0.0434023 | 30.4015 | 25.5374 | 0.0304503 | 0.7 | 0.471623 | 0.449361 | 0.02064866276346605 | 0.04291066276346606 | 800 | 819 | 251 | 265
Lyngbya wollei | Cyanobacteria | Oscillatoriales | 1 | 155 | 9 | 16 | 0.36 | 0.413935 | 0.556667 | 2 | 2 | 0.895112 | 0.895112 | 1 | 9 | 0.17426 | 0.65509 | 8 | 13 | 1 | 3 | 0.0456746 | 0.0674362 |  |  | 0.0961297 |  | 0.481101 | 0.468866 | -0.121101 | -0.108866 | 3 | 8 | 6 | 8
[NAME] haemolytica | Proteobacteria | Gammaproteobacteria | 6 | 11 | 47 | 38 | 0.5529411764705883 | 0.29079 | 0.24897 | 14 | 8 | 0.398481 | 0.274599 | 6 | 11 | 0.15637 | 0.253629 | 35 | 31 | 12 | 7 | 0.024323 | 0.0322731 |  |  | 0.0311582 |  | 0.485408 | 0.472676 | 0.06753317647058826 | 0.08026517647058828 | 12 | 16 | 35 | 22
[NAME] laminosus | Cyanobacteria | Stigonemales | 10 | 33 | 53 | 37 | 0.5888888888888889 | 0.39759 | 0.315422 | 12 | 11 | 0.563327 | 0.541819 | 7 | 12 | 0.22738 | 0.335332 | 46 | 30 | 7 | 7 | 0.0183054 | 0.0248805 |  |  | 0.0151597 | 0.9 | 0.493913 | 0.48849 | 0.09497588888888892 | 0.1003988888888889 | 51 | 36 | 2 | 1
Microcystis aeruginosa | Cyanobacteria | Chroococcales | 4 | 18 | 19 | 12 | 0.6129032258064516 | 0.509341 | 0.395999 | 2 | 1 | 0.547599 | 0.37703 | 1 | 4 | 0.130152 | 0.374415 | 14 | 11 | 5 | 1 | 0.0389838 | 0.06574 | 39.1107 | 50.5283 | 0.0495518 | 18.3 | 0.501334 | 0.502387 | 0.1115692258064517 | 0.1105162258064516 | 11 | 9 | 8 | 3
Morganella morganii | Proteobacteria | Gammaproteobacteria | 3 | 9 | 11 | 13 | 0.4583333333333333 | 0.432479 | 0.473851 | 8 | 3 | 0.685185 | 0.449393 | 2 | 0 | 0.265512 | 0 | 7 | 10 | 4 | 3 | 0.0402026 | 0.0594108 |  |  | 0.0344033 |  | 0.492946 | 0.487157 | -0.03461266666666668 | -0.02882366666666669 | 8 | 11 | 3 | 2
Morganella psychrotolerans | Proteobacteria | Gammaproteobacteria | 6 | 13 | 54 | 33 | 0.6206896551724138 | 0.503549 | 0.382658 | 18 | 14 | 0.515152 | 0.452471 | 8 | 3 | 0.365636 | 0.177729 | 45 | 25 | 9 | 8 | 0.0411711 | 0.0570762 |  |  | 0.053474 |  | 0.500387 | 0.500705 | 0.1203026551724138 | 0.1199846551724139 | 25 | 18 | 29 | 15
Mycobacterium avium | Actinobacteria | Actinobacteria | 11 | 11 | 76 | 24 | 0.76 | 0.92539 | 0.796613 | 16 | 7 | 0.875241 | 0.754255 | 17 | 6 | 0.802928 | 0.589825 | 63 | 18 | 13 | 6 | 0.0217703 | 0.0284947 | 89.3951 | 91.8366 | 0.0174485 |  | 0.584556 | 0.64234 | 0.175444 | 0.11766 | 35 | 13 | 41 | 11
Mycobacterium mucogenicum | Actinobacteria | Actinobacteria | 2 | 15.5 | 9 | 7 | 0.5625 | 0.859589 | 0.826435 | 0 | 0 | 0.972924 | -1 | 0 | 0 | 0.936679 | -1 | 6 | 7 | 3 | 0 | 0.0114699 | 0.0201351 |  |  | 0.0150362 |  | 0.530791 | 0.557104 | 0.03170899999999999 | 0.005395999999999956 | 5 | 5 | 4 | 2
Mycoplasma gallisepticum | [NAME] | Mollicutes | 10 | 26 | 10 | 45 | 0.1818181818181818 | 0.151891 | 0.446266 | 20 | 8 | 0.339874 | 0.170775 | 4 | 6 | 0.145889 | 0.203956 | 8 | 29 | 2 | 16 | 0.0275768 | 0.0364143 | 23.6506 | 23.5419 | 0.022509 |  | 0.442449 | 0.399694 | -0.2606308181818182 | -0.2178758181818182 | 7 | 32 | 3 | 13
Mycoplasma hyopneumoniae | [NAME] | Mollicutes | 1 | 12 | 10 | 6 | 0.625 | 0.188656 | 0.122432 | 3 | 6 | 0.169051 | 0.28921 | 8 | 4 | 0.163808 | 0.089211 | 6 | 6 | 4 | 0 | 0.0223948 | 0.0354791 | 19.4142 | 22.178 | 0.0129411 | 3 | 0.46431 | 0.43515 | 0.16069 | 0.18985 | 7 | 4 | 3 | 2
Mycoplasma mycoides | [NAME] | Mollicutes | 4 | 11 | 2 | 27 | 0.06896551724137931 | 0.0227959 | 0.2395 | 6 | 17 | 0.14942 | 0.332321 | 2 | 20 | 0.0451722 | 0.321156 | 2 | 24 | 0 | 3 | 0.0379166 | 0.0364581 | 9.34243 | 9.46413 | 0.0313139 |  | 0.0349716 | 0.0269314 | 0.03399391724137931 | 0.04203411724137931 | 2 | 6 | 0 | 21
Myxococcus xanthus | Proteobacteria | delta/epsilon subdivisions | 19 | 20 | 152 | 26 | 0.8539325842696629 | 0.947493 | 0.7553 | 53 | 10 | 0.913212 | 0.665029 | 24 | 9 | 0.906866 | 0.785015 | 128 | 20 | 24 | 6 | 0.0203777 | 0.0279502 | 88.6133 | 90.5399 | 0.0229755 | 5.5 | 0.650705 | 0.731272 | 0.2032275842696629 | 0.1226605842696629 | 84 | 21 | 68 | 5
Neisseria gonorrhoeae | Proteobacteria | [NAME] | 16 | 15.5 | 98 | 51 | 0.6577181208053692 | 0.703 | 0.551933 | 35 | 17 | 0.697132 | 0.527857 | 9 | 10 | 0.137621 | 0.150609 | 84 | 47 | 14 | 4 | 0.0180067 | 0.0219299 | 62.6312 | 45.9897 | 0.0154849 |  | 0.510739 | 0.520476 | 0.1469791208053691 | 0.1372421208053691 | 68 | 42 | 30 | 9
Neisseria lactamica | Proteobacteria | [NAME] | 2 | 43 | 36 | 13 | 0.7346938775510204 | 0.660453 | 0.412593 | 10 | 8 | 0.825296 | 0.790759 | 1 | 3 | 0.0705013 | 0.185367 | 32 | 12 | 4 | 1 | 0.0344834 | 0.0485954 |  |  | 0.0436884 | 6.2 | 0.521691 | 0.538556 | 0.2130028775510204 | 0.1961378775510204 | 19 | 9 | 17 | 4
Neisseria meningitidis | Proteobacteria | [NAME] | 35 | 30 | 393 | 190 | 0.6740994854202401 | 0.725872 | 0.561436 | 123 | 83 | 0.614948 | 0.518695 | 58 | 61 | 0.23728 | 0.246528 | 323 | 159 | 70 | 31 | 0.0381946 | 0.0472888 | 61.6083 | 45.71 | 0.0337927 | 7.1 | 0.53188 | 0.556676 | 0.1422194854202401 | 0.1174234854202402 | 270 | 158 | 123 | 32
Nodularia spumigena | Cyanobacteria | Nostocales | 5 | 10 | 13 | 11 | 0.5416666666666666 | 0.311592 | 0.27693 | 8 | 5 | 0.572954 | 0.456091 | 1 | 3 | 0.228464 | 0.470437 | 10 | 8 | 3 | 3 | 0.0409039 | 0.0505537 |  |  | 0.0315882 |  | 0.478792 | 0.461301 | 0.06287466666666663 | 0.08036566666666661 | 10 | 7 | 3 | 4
[NAME] tsutsugamushi | Proteobacteria | Alphaproteobacteria | 4 | 23 | 40 | 41 | 0.4938271604938271 | 0.202521 | 0.206538 | 12 | 20 | 0.13878 | 0.211712 | 27 | 26 | 0.422473 | 0.413293 | 29 | 26 | 11 | 15 | 0.0748797 | 0.0806843 | 22.6128 | 19.5496 | 0.0421117 |  | 0.41149 | 0.358361 | 0.08233716049382711 | 0.1354661604938271 | 30 | 32 | 10 | 9
Paenibacillus amylolyticus | Firmicutes | [NAME] | 1 | 13 | 7 | 8 | 0.4666666666666667 | 0.360799 | 0.39213 | 5 | 2 | 0.506466 | 0.291022 | 3 | 2 | 0.320755 | 0.239437 | 6 | 7 | 1 | 1 | 0.0419007 | 0.0466674 |  |  | 0.0406194 |  | 0.486659 | 0.475489 | -0.01999233333333333 | -0.008822333333333321 | 1 | 5 | 6 | 3
Pantoea agglomerans | Proteobacteria | Gammaproteobacteria | 7 | 9 | 74 | 36 | 0.6727272727272727 | 0.6001 | 0.421977 | 27 | 16 | 0.580553 | 0.45061 | 10 | 11 | 0.417784 | 0.441133 | 59 | 29 | 15 | 7 | 0.0277373 | 0.0409675 |  |  | 0.0432454 |  | 0.507209 | 0.513459 | 0.1655182727272727 | 0.1592682727272727 | 31 | 14 | 43 | 22
Pantoea ananatis | Proteobacteria | Gammaproteobacteria | 4 | 22 | 11 | 5 | 0.6875 | 0.591841 | 0.397264 | 7 | 1 | 0.702264 | 0.252031 | 2 | 0 | 0.420503 | 0 | 6 | 3 | 5 | 2 | 0.00907606 | 0.00966233 |  |  | 0.00928447 |  | 0.501934 | 0.50379 | 0.185566 | 0.18371 | 7 | 2 | 4 | 3
Pantoea stewartii | Proteobacteria | Gammaproteobacteria | 4 | 10 | 13 | 3 | 0.8125 | 0.6 | 0.257143 | 3 | 3 | 0.701991 | 0.701991 | 4 | 2 | 0.425279 | 0.270067 | 11 | 3 | 2 | 0 | 0.0129504 | 0.0181899 |  |  | 0.0129116 |  | 0.503436 | 0.506656 | 0.309064 | 0.305844 | 10 | 3 | 3 | 0
Pantoea vagans | Proteobacteria | Gammaproteobacteria | 4 | 17 | 23 | 16 | 0.5897435897435898 | 0.581551 | 0.49156 | 11 | 2 | 0.675267 | 0.274354 | 4 | 4 | 0.422612 | 0.422612 | 20 | 12 | 3 | 4 | 0.0213423 | 0.0301595 |  |  | 0.0245834 |  | 0.505005 | 0.509456 | 0.08473858974358972 | 0.08028758974358974 | 11 | 11 | 12 | 5
Pasteurella multocida | Proteobacteria | Gammaproteobacteria | 4 | 11 | 11 | 8 | 0.5789473684210527 | 0.269558 | 0.211598 | 2 | 6 | 0.46086 | 0.719449 | 3 | 1 | 0.163437 | 0.0611406 | 11 | 7 | 0 | 1 | 0.020541 | 0.0243248 | 34.7099 | 27.7396 | 0.0148396 |  | 0.487441 | 0.476179 | 0.09150636842105264 | 0.1027683684210526 | 9 | 6 | 2 | 2
Pectobacterium carotovorum | Proteobacteria | Gammaproteobacteria | 1 | 23 | 6 | 6 | 0.5 | 0.620735 | 0.620735 | 3 | 1 | 0.549133 | 0.288754 | 1 | 1 | 0.429158 | 0.429158 | 3 | 6 | 3 | 0 | 0.039439 | 0.0555618 |  |  | 0.0650263 |  | 0.515691 | 0.528127 | -0.01569100000000001 | -0.02812700000000001 | 0 | 3 | 6 | 3
Photobacterium kishitanii | Proteobacteria | Gammaproteobacteria | 12 | 27 | 67 | 58 | 0.536 | 0.235373 | 0.210409 | 22 | 21 | 0.290478 | 0.280984 | 2 | 12 | 0.258621 | 0.676692 | 49 | 51 | 18 | 7 | 0.0293427 | 0.0470953 |  |  | 0.0257936 |  | 0.460233 | 0.429979 | 0.07576700000000003 | 0.106021 | 49 | 49 | 18 | 9
Photobacterium leiognathi | Proteobacteria | Gammaproteobacteria | 7 | 16 | 73 | 66 | 0.5251798561151079 | 0.271535 | 0.25206 | 45 | 9 | 0.561463 | 0.203861 | 21 | 14 | 0.297464 | 0.220137 | 60 | 48 | 13 | 18 | 0.0441739 | 0.0680257 |  |  | 0.047861 |  | 0.45725 | 0.425817 | 0.06792985611510788 | 0.09936285611510787 | 49 | 45 | 24 | 21
Photobacterium phosphoreum | Proteobacteria | Gammaproteobacteria | 3 | 20 | 21 | 9 | 0.7 | 0.276873 | 0.140962 | 6 | 5 | 0.267386 | 0.233215 | 7 | 1 | 0.309315 | 0.0601298 | 20 | 6 | 1 | 3 | 0.0179305 | 0.0280685 |  |  | 0.017193 |  | 0.483338 | 0.4688 | 0.216662 | 0.2312 | 18 | 8 | 3 | 1
Planktothrix agardhii | Cyanobacteria | Oscillatoriales | 5 | 38 | 6 | 9 | 0.4 | 0.410678 | 0.511074 | 1 | 4 | 0.587288 | 0.850568 | 1 | 1 | 0.245797 | 0.245797 | 6 | 7 | 0 | 2 | 0.00836094 | 0.0125992 |  |  | 0.0126254 |  | 0.497267 | 0.494695 | -0.09726699999999999 | -0.09469499999999997 | 4 | 7 | 2 | 2
Propionibacterium acnes | Actinobacteria | Actinobacteria | 3 | 20 | 14 | 9 | 0.6086956521739131 | 0.639262 | 0.532536 | 1 | 0 | 0.597953 | 0 | 3 | 2 | 0.776892 | 0.698925 | 13 | 9 | 1 | 0 | 0.0138258 | 0.0206696 | 69.4192 | 76.6996 | 0.0129867 |  | 0.506546 | 0.512539 | 0.102149652173913 | 0.09615665217391312 | 14 | 8 | 0 | 1
Pseudomonas aeruginosa | Proteobacteria | Gammaproteobacteria | 8 | 34 | 60 | 11 | 0.8450704225352113 | 0.931644 | 0.71418 | 11 | 5 | 0.897301 | 0.798851 | 9 | 6 | 0.7963 | 0.722694 | 53 | 9 | 7 | 2 | 0.011093 | 0.0143287 | 87.358 | 75.4646 | 0.0126894 |  | 0.558651 | 0.60394 | 0.2864194225352112 | 0.2411304225352112 | 32 | 8 | 28 | 3
Pseudomonas savastanoi | Proteobacteria | Gammaproteobacteria | 1 | 9 | 9 | 8 | 0.5294117647058824 | 0.758721 | 0.736508 | 5 | 2 | 0.78392 | 0.59203 | 2 | 2 | 0.483254 | 0.483254 | 9 | 5 | 0 | 3 | 0.0496844 | 0.0679983 |  |  | 0.0992846 |  | 0.543218 | 0.57501 | -0.01380623529411762 | -0.04559823529411766 | 0 | 0 | 9 | 8
Pseudomonas syringae | Proteobacteria | Gammaproteobacteria | 5 | 10 | 30 | 25 | 0.5454545454545454 | 0.666383 | 0.624701 | 11 | 8 | 0.696502 | 0.625332 | 3 | 5 | 0.590732 | 0.70637 | 17 | 18 | 13 | 7 | 0.0243747 | 0.0322934 | 71.6417 | 60.5586 | 0.0279935 | 1.5 | 0.511205 | 0.521127 | 0.03424954545454539 | 0.02432754545454541 | 17 | 13 | 13 | 12
Pseudomonas viridiflava | Proteobacteria | Gammaproteobacteria | 5 | 83 | 60 | 19 | 0.759493670886076 | 0.773662 | 0.51979 | 23 | 9 | 0.712605 | 0.492451 | 16 | 6 | 0.587911 | 0.348534 | 45 | 14 | 15 | 5 | 0.0595887 | 0.0738976 |  |  | 0.0407296 | 2 | 0.58525 | 0.632816 | 0.174243670886076 | 0.126677670886076 | 47 | 15 | 13 | 4
Ralstonia solanacearum | Proteobacteria | [NAME] | 18 | 50 | 204 | 51 | 0.8 | 0.959009 | 0.853992 | 123 | 36 | 0.864604 | 0.651447 | 63 | 24 | 0.847203 | 0.678688 | 186 | 46 | 18 | 5 | 0.0409179 | 0.0500418 | 87.7707 | 80.5601 | 0.025406 | 1.1 | 0.912684 | 0.948092 | -0.112684 | -0.148092 | 132 | 49 | 72 | 2
Rhizobium etli | Proteobacteria | Alphaproteobacteria | 4 | 17.5 | 11 | 10 | 0.5238095238095238 | 0.833639 | 0.819997 | 7 | 4 | 0.65754 | 0.523167 | 1 | 3 | 0.631358 | 0.83708 | 10 | 9 | 1 | 1 | 0.0197225 | 0.0287882 | 77.5379 | 77.2819 | 0.018867 |  | 0.536868 | 0.567087 | -0.01305847619047618 | -0.04327747619047617 | 9 | 9 | 2 | 1
Rhizobium gallicum | Proteobacteria | Alphaproteobacteria | 6 | 17.5 | 53 | 28 | 0.654320987654321 | 0.766939 | 0.634836 | 28 | 10 | 0.687417 | 0.439905 | 11 | 5 | 0.677966 | 0.488998 | 47 | 18 | 6 | 10 | 0.0488696 | 0.0633289 |  |  | 0.0503779 | 0.1 | 0.552801 | 0.590746 | 0.101519987654321 | 0.06357498765432101 | 30 | 21 | 23 | 7
Rhizobium leguminosarum | Proteobacteria | Alphaproteobacteria | 2 | 15.5 | 13 | 12 | 0.52 | 0.664494 | 0.646421 | 2 | 3 | 0.612693 | 0.703519 | 2 | 4 | 0.693702 | 0.819155 | 9 | 11 | 4 | 1 | 0.0346545 | 0.0492079 | 77.7702 | 75.879 | 0.0347976 |  | 0.51898 | 0.534551 | 0.001020000000000021 | -0.01455099999999998 | 10 | 10 | 3 | 2
Rhizobium tropici | Proteobacteria | Alphaproteobacteria | 1 | 9 | 12 | 5 | 0.7058823529411765 | 0.764526 | 0.574977 | 4 | 3 | 0.712251 | 0.649913 | 0 | 2 | 0.575758 | 1 | 10 | 5 | 2 | 0 | 0.060372 | 0.0985987 |  |  | 0.0573847 |  | 0.569119 | 0.61297 | 0.1367633529411765 | 0.0929123529411765 | 8 | 4 | 4 | 1
Riemerella anatipestifer | Bacteroidetes/chlorobi | Bacteroidetes | 1 | 23 | 10 | 14 | 0.4166666666666667 | 0.115293 | 0.154295 | 10 | 9 | 0.380793 | 0.356281 | 3 | 10 | 0.331522 | 0.623085 | 6 | 10 | 4 | 4 | 0.072172 | 0.0786568 |  |  | 0.0377433 |  | 0.311292 | 0.233952 | 0.1053746666666667 | 0.1827146666666667 | 1 | 4 | 9 | 10
Salmonella enterica | Proteobacteria | Gammaproteobacteria | 30 | 22 | 334 | 147 | 0.6943866943866944 | 0.687535 | 0.491979 | 137 | 59 | 0.619674 | 0.412345 | 45 | 50 | 0.407513 | 0.433179 | 288 | 125 | 46 | 22 | 0.0292577 | 0.040157 | 59.2226 | 51.8911 | 0.0325077 | 30.2 | 0.519311 | 0.535391 | 0.1750756943866945 | 0.1589956943866945 | 222 | 108 | 112 | 39
Shigella boydii | Proteobacteria | Gammaproteobacteria | 50 | 17 | 661 | 509 | 0.564957264957265 | 0.638034 | 0.575795 | 170 | 118 | 0.509156 | 0.418609 | 119 | 86 | 0.371097 | 0.298953 | 536 | 406 | 125 | 103 | 0.0365233 | 0.051251 | 56.5282 | 50.4321 | 0.0633664 |  | 0.51564 | 0.528384 | 0.04931726495726496 | 0.03657326495726498 | 112 | 82 | 549 | 427
Shigella dysenteriae | Proteobacteria | Gammaproteobacteria | 47 | 12 | 279 | 193 | 0.5911016949152542 | 0.621242 | 0.531533 | 70 | 56 | 0.508223 | 0.452581 | 36 | 24 | 0.356429 | 0.269657 | 226 | 157 | 53 | 36 | 0.0184286 | 0.026739 | 56.8938 | 50.7542 | 0.0276216 |  | 0.506562 | 0.512506 | 0.08453969491525426 | 0.0785956949152542 | 79 | 94 | 200 | 99
Shigella flexneri | Proteobacteria | Gammaproteobacteria | 51 | 10 | 135 | 83 | 0.6192660550458715 | 0.629444 | 0.510848 | 44 | 32 | 0.504585 | 0.42553 | 14 | 15 | 0.366171 | 0.382327 | 103 | 61 | 32 | 22 | 0.00977767 | 0.013668 | 56.0981 | 51.3435 | 0.0137317 |  | 0.50342 | 0.506671 | 0.1158460550458715 | 0.1125950550458715 | 34 | 19 | 101 | 64
Shigella sonnei | Proteobacteria | Gammaproteobacteria | 9 | 10 | 12 | 2 | 0.8571428571428571 | 0.612706 | 0.208654 | 0 | 1 | 0.492408 | 1 | 1 | 1 | 0.363533 | 0.363533 | 5 | 1 | 7 | 1 | 0.00355758 | 0.00528392 | 56.6495 | 50.7717 | 0.00391554 |  | 0.501119 | 0.502216 | 0.3560238571428571 | 0.3549268571428571 | 2 | 0 | 10 | 2
Sinorhizobium meliloti | Proteobacteria | Alphaproteobacteria | 6 | 30.5 | 16 | 2 | 0.8888888888888888 | 0.806495 | 0.342528 | 5 | 6 | 0.596537 | 0.639542 | 7 | 0 | 0.742893 | 0 | 8 | 0 | 8 | 2 | 0.0164812 | 0.0216112 | 79.692 | 77.5562 | 0.0184791 |  | 0.524455 | 0.545493 | 0.3644338888888888 | 0.3433958888888888 | 2 | 0 | 14 | 2
Sorangium cellulosum | Proteobacteria | delta/epsilon subdivisions | 2 | 15.5 | 15 | 2 | 0.8823529411764706 | 0.987916 | 0.915971 | 6 | 4 | 0.944444 | 0.918919 | 7 | 1 | 0.982564 | 0.889508 | 14 | 2 | 1 | 0 | 0.0487616 | 0.0825681 | 91.6875 | 93.1417 | 0.0170361 |  | 1 | 1 | -0.1176470588235294 | -0.1176470588235294 | 6 | 2 | 9 | 0
Staphylococcus aureus | Firmicutes | [NAME] | 36 | 20 | 109 | 136 | 0.4448979591836735 | 0.188542 | 0.224749 | 65 | 52 | 0.264485 | 0.223405 | 14 | 39 | 0.156205 | 0.340237 | 89 | 115 | 20 | 21 | 0.0193596 | 0.0273662 | 22.6026 | 20.1603 | 0.0209929 | 0.1 | 0.469979 | 0.444782 | -0.02508104081632651 | 0.0001159591836734641 | 65 | 88 | 44 | 48
Staphylococcus xylosus | Firmicutes | [NAME] | 1 | 25 | 15 | 14 | 0.5172413793103449 | 0.145838 | 0.137452 | 10 | 18 | 0.296445 | 0.431313 | 4 | 7 | 0.0877976 | 0.144154 | 11 | 12 | 4 | 2 | 0.0279048 | 0.0307844 |  |  | 0.0451775 |  | 0.450846 | 0.412921 | 0.06639537931034484 | 0.1043203793103449 | 14 | 14 | 1 | 0
[NAME] maltophilia | Proteobacteria | Gammaproteobacteria | 2 | 68 | 50 | 6 | 0.8928571428571429 | 0.933293 | 0.626714 | 28 | 4 | 0.911728 | 0.596045 | 15 | 6 | 0.764571 | 0.565033 | 43 | 6 | 7 | 0 | 0.0601258 | 0.0827212 | 84.0267 | 82.611 | 0.0606506 |  | 0.920211 | 0.949678 | -0.0273538571428571 | -0.05682085714285712 | 29 | 5 | 21 | 1
Streptococcus agalactiae | Firmicutes | [NAME] | 15 | 37 | 59 | 50 | 0.5412844036697247 | 0.208222 | 0.182248 | 24 | 30 | 0.182864 | 0.218588 | 17 | 18 | 0.250449 | 0.261331 | 44 | 41 | 15 | 9 | 0.0134834 | 0.0164972 | 25.9627 | 22.4432 | 0.00975943 |  | 0.482917 | 0.467704 | 0.05836740366972476 | 0.07358040366972474 | 57 | 45 | 2 | 5
Streptococcus mitis | Firmicutes | [NAME] | 4 | 33.5 | 21 | 49 | 0.3 | 0.202808 | 0.372493 | 23 | 16 | 0.509954 | 0.419925 | 9 | 17 | 0.242775 | 0.377179 | 18 | 40 | 3 | 9 | 0.0642139 | 0.0759192 |  |  | 0.0631481 |  | 0.40934 | 0.355691 | -0.10934 | -0.05569099999999999 | 14 | 28 | 7 | 21
Streptococcus pneumoniae | Firmicutes | [NAME] | 38 | 58 | 281 | 229 | 0.5509803921568628 | 0.362954 | 0.317086 | 144 | 87 | 0.396963 | 0.284543 | 77 | 60 | 0.340914 | 0.287269 | 220 | 180 | 61 | 49 | 0.0218076 | 0.0269648 | 35.754 | 27.625 | 0.0209901 | 23.1 | 0.48966 | 0.480741 | 0.0613203921568628 | 0.07023939215686281 | 208 | 151 | 73 | 78
Streptococcus pyogenes | Firmicutes | [NAME] | 10 | 13 | 51 | 58 | 0.4678899082568808 | 0.219671 | 0.24251 | 9 | 18 | 0.331304 | 0.497714 | 12 | 21 | 0.224685 | 0.336494 | 42 | 52 | 9 | 6 | 0.0148037 | 0.0216211 | 32.1471 | 26.0464 | 0.0196699 | 17.2 | 0.483652 | 0.46908 | -0.01576209174311927 | -0.001190091743119237 | 25 | 43 | 26 | 15
Streptococcus salivarius | Firmicutes | [NAME] | 4 | 16 | 18 | 27 | 0.4 | 0.15697 | 0.21832 | 38 | 21 | 0.592141 | 0.445161 | 9 | 11 | 0.108207 | 0.129148 | 16 | 21 | 2 | 6 | 0.0785068 | 0.0770803 |  |  | 0.0436592 |  | 0.383013 | 0.316732 | 0.01698700000000003 | 0.08326800000000001 | 11 | 13 | 7 | 14
Streptococcus suis | Firmicutes | [NAME] | 2 | 35 | 17 | 20 | 0.4594594594594595 | 0.222683 | 0.252075 | 11 | 10 | 0.208588 | 0.19329 | 8 | 6 | 0.293804 | 0.237821 | 15 | 19 | 2 | 1 | 0.0463892 | 0.0537238 | 38.53 | 30.7511 | 0.0676768 |  | 0.447104 | 0.40969 | 0.01235545945945948 | 0.04976945945945949 | 17 | 19 | 0 | 1
[NAME] | Firmicutes | [NAME] | 4 | 21 | 26 | 16 | 0.6190476190476191 | 0.174254 | 0.114936 | 13 | 9 | 0.407149 | 0.322241 | 1 | 6 | 0.157768 | 0.529174 | 20 | 11 | 6 | 5 | 0.0171113 | 0.019167 | 33.6655 | 26.5074 | 0.0121656 |  | 0.477342 | 0.457539 | 0.1417056190476191 | 0.1615086190476191 | 20 | 10 | 6 | 6
[NAME] | Firmicutes | [NAME] | 12 | 21 | 28 | 24 | 0.5384615384615384 | 0.202551 | 0.178788 | 7 | 11 | 0.319839 | 0.42494 | 4 | 6 | 0.122843 | 0.173602 | 19 | 18 | 9 | 6 | 0.0115021 | 0.0159364 | 28.184 | 21.8072 | 0.0141648 |  | 0.484832 | 0.471109 | 0.05362953846153845 | 0.06735253846153844 | 12 | 16 | 16 | 8
Treponema pallidum | Spirochaetes | Spirochaetes | 16 | 22 | 12 | 14 | 0.4615384615384616 | 0.596226 | 0.632723 | 6 | 9 | 0.467062 | 0.567957 | 3 | 9 | 0.677192 | 0.862891 | 11 | 14 | 1 | 0 | 0.00657552 | 0.00637084 | 54.1118 | 54.9331 | 0.00505083 |  | 0.501335 | 0.502634 | -0.03979653846153841 | -0.04109553846153846 | 6 | 5 | 6 | 9
Veillonella parvula | Firmicutes | Clostridia | 1 | 22 | 8 | 6 | 0.5714285714285714 | 0.278351 | 0.224377 | 9 | 1 | 0.395455 | 0.067757 | 5 | 2 | 0.152597 | 0.0671909 | 7 | 5 | 1 | 1 | 0.0281407 | 0.0337897 |  |  | 0.0395928 |  | 0.479584 | 0.462295 | 0.09184457142857139 | 0.1091335714285714 | 5 | 4 | 3 | 2
[NAME] alginolyticus | Proteobacteria | Gammaproteobacteria | 3 | 10 | 7 | 13 | 0.35 | 0.264899 | 0.400923 | 3 | 2 | 0.560959 | 0.459983 | 1 | 3 | 0.31118 | 0.575421 | 6 | 9 | 1 | 4 | 0.0105243 | 0.01634 |  |  | 0.016066 |  | 0.491033 | 0.482693 | -0.141033 | -0.132693 | 2 | 5 | 5 | 8
Vibrio campbellii | Proteobacteria | Gammaproteobacteria | 6 | 24.5 | 24 | 23 | 0.5106382978723404 | 0.226002 | 0.218644 | 16 | 3 | 0.706305 | 0.310781 | 1 | 7 | 0.336451 | 0.780188 | 18 | 17 | 6 | 6 | 0.026193 | 0.0380682 |  |  | 0.0297991 |  | 0.466288 | 0.439235 | 0.04435029787234041 | 0.0714032978723404 | 15 | 11 | 9 | 12
Vibrio cholerae | Proteobacteria | Gammaproteobacteria | 44 | 16 | 482 | 309 | 0.6093552465233881 | 0.560752 | 0.45007 | 103 | 103 | 0.427473 | 0.427473 | 62 | 69 | 0.330707 | 0.354797 | 383 | 229 | 99 | 80 | 0.026111 | 0.0393233 | 49.1361 | 39.8149 | 0.0377768 |  | 0.504972 | 0.509275 | 0.1043832465233882 | 0.1000802465233881 | 183 | 150 | 299 | 159
Vibrio fischeri | Proteobacteria | Gammaproteobacteria | 2 | 35 | 7 | 19 | 0.2692307692307692 | 0.26509 | 0.494712 | 6 | 9 | 0.280374 | 0.368852 | 6 | 6 | 0.254501 | 0.254501 | 6 | 14 | 1 | 5 | 0.0290564 | 0.0422911 | 28.9893 | 31.6449 | 0.0287967 |  | 0.469479 | 0.445509 | -0.2002482307692308 | -0.1762782307692308 | 4 | 9 | 3 | 10
[NAME] harveyi | Proteobacteria | Gammaproteobacteria | 8 | 70 | 72 | 80 | 0.4736842105263158 | 0.244325 | 0.264297 | 51 | 24 | 0.679427 | 0.499342 | 17 | 22 | 0.336844 | 0.396621 | 59 | 60 | 13 | 20 | 0.0426748 | 0.0577393 | 45.1967 | 35.1156 | 0.0594913 |  | 0.443715 | 0.4064 | 0.02996921052631574 | 0.06728421052631578 | 62 | 72 | 10 | 8
Vibrio mimicus | Proteobacteria | Gammaproteobacteria | 3 | 12 | 22 | 15 | 0.5945945945945946 | 0.343378 | 0.262838 | 4 | 5 | 0.510058 | 0.565468 | 2 | 2 | 0.313278 | 0.313278 | 18 | 10 | 4 | 5 | 0.0234066 | 0.0365466 |  |  | 0.033212 |  | 0.487718 | 0.477029 | 0.1068765945945946 | 0.1175655945945946 | 15 | 10 | 7 | 5
[NAME] parahaemolyticus | Proteobacteria | Gammaproteobacteria | 23 | 19 | 160 | 107 | 0.599250936329588 | 0.314988 | 0.235188 | 69 | 28 | 0.626226 | 0.404719 | 33 | 22 | 0.325248 | 0.243198 | 137 | 64 | 23 | 43 | 0.0312652 | 0.0435272 | 44.9427 | 35.3546 | 0.0345205 | 39.8 | 0.480552 | 0.464514 | 0.1186989363295881 | 0.1347369363295881 | 89 | 63 | 71 | 44
[NAME] vulnificus | Proteobacteria | Gammaproteobacteria | 12 | 43 | 82 | 83 | 0.496969696969697 | 0.416183 | 0.419131 | 20 | 20 | 0.581055 | 0.581055 | 15 | 16 | 0.307905 | 0.321826 | 71 | 61 | 11 | 22 | 0.0351841 | 0.0516445 | 47.8929 | 37.1013 | 0.0372336 | 26.7 | 0.488895 | 0.480209 | 0.008074696969696926 | 0.01676069696969695 | 52 | 68 | 30 | 15
Wolbachia endosymbiont | Proteobacteria | Alphaproteobacteria | 17 | 17 | 82 | 140 | 0.3693693693693694 | 0.173557 | 0.263918 | 61 | 57 | 0.306714 | 0.292484 | 21 | 40 | 0.17407 | 0.286448 | 71 | 125 | 11 | 15 | 0.0442761 | 0.0449631 | 27.3423 | 25.5858 | 0.0440786 | 3.5 | 0.44633 | 0.406505 | -0.07696063063063063 | -0.03713563063063063 | 45 | 70 | 37 | 70
Wolbachia pipientis | Proteobacteria | Alphaproteobacteria | 7 | 16 | 83 | 72 | 0.535483870967742 | 0.221964 | 0.198383 | 36 | 30 | 0.208894 | 0.180357 | 29 | 40 | 0.277912 | 0.346772 | 71 | 62 | 12 | 10 | 0.0576177 | 0.0656138 |  |  | 0.0649926 |  | 0.441896 | 0.400794 | 0.09358787096774196 | 0.134689870967742 | 52 | 39 | 31 | 33
[NAME] axonopodis | Proteobacteria | Gammaproteobacteria | 10 | 30 | 192 | 48 | 0.8 | 0.925494 | 0.756419 | 73 | 38 | 0.818872 | 0.701793 | 32 | 25 | 0.702665 | 0.648661 | 164 | 37 | 28 | 11 | 0.0559771 | 0.069262 | 80.5123 | 81.0101 | 0.0463223 |  | 0.798086 | 0.868636 | 0.001914000000000082 | -0.06863599999999992 | 139 | 43 | 53 | 5
[NAME] campestris | Proteobacteria | Gammaproteobacteria | 10 | 14 | 44 | 15 | 0.7457627118644068 | 0.912789 | 0.78109 | 19 | 12 | 0.782366 | 0.694231 | 13 | 7 | 0.749718 | 0.617292 | 36 | 12 | 8 | 3 | 0.0247316 | 0.0317791 | 81.2113 | 80.5407 | 0.0192798 |  | 0.588447 | 0.648813 | 0.1573157118644067 | 0.09694971186440682 | 22 | 11 | 22 | 4
[NAME] citri | Proteobacteria | Gammaproteobacteria | 3 | 28 | 20 | 7 | 0.7407407407407407 | 0.932823 | 0.829355 | 7 | 3 | 0.843088 | 0.697218 | 3 | 0 | 0.740286 | 0 | 18 | 7 | 2 | 0 | 0.0231907 | 0.0343047 |  |  | 0.0173163 |  | 0.650183 | 0.728944 | 0.09055774074074074 | 0.01179674074074066 | 16 | 6 | 4 | 1
Xylella fastidiosa | Proteobacteria | Gammaproteobacteria | 30 | 42 | 82 | 66 | 0.5540540540540541 | 0.599613 | 0.546562 | 14 | 12 | 0.438301 | 0.400781 | 11 | 7 | 0.48681 | 0.376423 | 64 | 56 | 18 | 10 | 0.0130982 | 0.0181717 | 56.0901 | 44.3068 | 0.0117497 |  | 0.504547 | 0.508704 | 0.04950705405405409 | 0.04535005405405401 | 75 | 59 | 7 | 7