Spreadsheet: 2a8b6b91-33d4-43e4-9c74-e01d9b8f3567
Sheet: Sheet1

Unnamed: 0 | NIA [NAME] | Unnamed: 2 | Unnamed: 3 | Unnamed: 4 | Unnamed: 5 | Unnamed: 6 | Unnamed: 7 | Unnamed: 8 | Unnamed: 9 | Unnamed: 10 | Unnamed: 11 | Unnamed: 12 | Unnamed: 13 | Unnamed: 14 | Unnamed: 15 | Unnamed: 16 | Unnamed: 17 | Unnamed: 18 | Other | Unnamed: 20
 |  |  |  | n Exons | n | 1 | n | 1 | n | 1 | n | 1 | n | 1 | n | 1 |  | Protein-coding | Multi-exon
 |  |  |  | M &Kozak | yes | yes | no | no | yes | yes | no | no | yes | yes | no | no | Grand | Genes | genes | All
 |  |  |  | ORFlength, a.a. | >=200 | >=200 | >=200 | >=200 | 100-199 | 100-199 | 100-199 | 100-199 | <100 | <100 | <100 | <100 | Total | ORF>=100a.a. |  | Genes
NIA | Rik | Ens | Ref | NM
+ |  |  |  |  | 10 | 1 | 13 | 10 | 34 | 72 | 138 | 323 | 74 | 903 | 302 | 3444 | 5324 | 601 | 376 | 977
 | + |  |  |  | 75 | 32 | 185 | 125 | 216 | 233 | 1005 | 1063 | 594 | 801 | 1830 | 2688 | 8847 | 2934 | 2424 | 5358
+ | + |  |  |  | 30 | 14 | 49 | 18 | 27 | 37 | 91 | 198 | 41 | 144 | 104 | 408 | 1161 | 464 | 145 | 609
 |  | + |  |  | 140 | 31 | 763 | 230 | 79 | 56 | 385 | 274 | 22 | 44 | 126 | 261 | 2411 | 1958 | 148 | 2106
+ |  | + |  |  | 30 | 12 | 103 | 16 | 7 | 14 | 15 | 15 | 2 | 7 | 3 | 3 | 227 | 212 | 5 | 217
 | + | + |  |  | 132 | 14 | 293 | 25 | 35 | 37 | 118 | 60 | 11 | 5 | 16 | 18 | 764 | 714 | 27 | 741
+ | + | + |  |  | 135 | 4 | 242 | 16 | 11 | 12 | 24 | 13 | 7 | 1 | 7 | 3 | 475 | 457 | 14 | 471
 |  |  | + |  | 8 | 37 | 39 | 162 | 45 | 92 | 60 | 200 | 8 | 47 | 23 | 159 | 880 | 643 | 31 | 674
+ |  |  | + |  | 18 | 15 | 51 | 32 | 24 | 14 | 37 | 37 | 3 | 5 | 3 | 5 | 244 | 228 | 6 | 234
 | + |  | + |  | 60 | 16 | 123 | 30 | 79 | 18 | 169 | 65 | 34 | 11 | 37 | 15 | 657 | 560 | 71 | 631
+ | + |  | + |  | 61 | 8 | 125 | 17 | 25 | 5 | 37 | 28 | 4 | 4 | 6 | 3 | 323 | 306 | 10 | 316
 |  | + | + |  | 84 | 70 | 488 | 378 | 27 | 98 | 122 | 153 | 2 | 9 | 7 | 10 | 1448 | 1420 | 9 | 1429
+ |  | + | + |  | 97 | 12 | 281 | 25 | 17 | 11 | 19 | 17 | 3 | 1 |  |  | 483 | 479 | 3 | 482
 | + | + | + |  | 379 | 26 | 757 | 57 | 121 | 44 | 176 | 54 | 6 | 3 | 2 | 1 | 1626 | 1614 | 8 | 1622
+ | + | + | + |  | 986 | 15 | 1713 | 26 | 72 | 10 | 71 | 9 | 2 |  |  |  | 2904 | 2902 | 2 | 2904
 |  |  | + | + | 8 | 6 | 15 | 145 | 2 | 4 | 9 | 6 | 5 |  | 2 | 4 | 206 | 195 | 7 | 202
+ |  |  | + | + | 2 |  | 6 | 4 | 2 |  | 2 | 1 |  |  |  |  | 17 | 17 | 0 | 17
 | + |  | + | + | 16 | 5 | 30 | 13 | 6 | 10 | 15 | 10 | 2 |  | 1 |  | 108 | 105 | 3 | 108
+ | + |  | + | + | 14 | 9 | 28 | 4 | 9 | 1 | 11 | 1 | 3 |  | 4 |  | 84 | 77 | 7 | 84
 |  | + | + | + | 295 | 29 | 484 | 567 | 58 | 15 | 86 | 27 | 14 | 6 | 14 | 10 | 1605 | 1561 | 28 | 1589
+ |  | + | + | + | 326 | 6 | 396 | 16 | 34 | 4 | 33 | 5 | 4 | 1 | 3 |  | 828 | 820 | 7 | 827
 | + | + | + | + | 754 | 49 | 976 | 61 | 200 | 28 | 202 | 37 | 27 | 5 | 14 | 1 | 2354 | 2307 | 41 | 2348
+ | + | + | + | + | 2276 | 37 | 2828 | 42 | 322 | 12 | 281 | 21 | 27 | 1 | 18 | 3 | 5868 | 5819 | 45 | 5864
Grand total |  |  |  |  | 5936 | 448 | 9988 | 2019 | 1452 | 827 | 3106 | 2617 | 895 | 1998 | 2522 | 7036 | 38844 | 26393 | 3417 | 29810
Total NIA |  |  |  |  | 3985 | 133 | 5835 | 226 | 584 | 192 | 759 | 668 | 170 | 1067 | 450 | 3869 | 17938 | 12382 | 620 | 13002
Total Riken |  |  |  |  | 4918 | 229 | 7349 | 434 | 1123 | 447 | 2200 | 1559 | 758 | 975 | 2039 | 3140 | 25171 | 18259 | 2797 | 21056
Total Ensembl |  |  |  |  | 5634 | 305 | 9324 | 1459 | 983 | 341 | 1532 | 685 | 127 | 83 | 210 | 310 | 20993 | 20263 | 337 | 20600
Total Refseq |  |  |  |  | 5384 | 340 | 8340 | 1579 | 1043 | 366 | 1330 | 671 | 144 | 93 | 134 | 211 | 19635 | 19053 | 278 | 19331
Total Refseq-NM |  |  |  |  | 3691 | 141 | 4763 | 852 | 633 | 74 | 639 | 108 | 82 | 13 | 56 | 18 | 11070 | 10901 | 138 | 11039
Legend for the table |  |  |  |  |  |  |  |  |  |  |  |  | Source of sequence | Protein-coding | Multi-exon ORF<100 | Total genes | %
Rows correspond to gene characteristics: |  |  |  |  |  |  |  |  |  |  |  |  | NIA | 12382 | 620 | 13002 | 43.61623616236162
 | n Exons |  |  |  | Number of exons (1 = one exon, n = multiple exons); |  |  |  |  |  |  |  | Riken | 18259 | 2797 | 21056 | 70.6340154310634
 | M &Kozak |  |  |  | First aminoacid is [NAME], and [NAME] consensus is adequate |  |  |  |  |  |  |  | Ensembl | 20263 | 337 | 20600 | 69.10432740691043
 | ORFlength, a.a. |  |  |  | Open reading frame length |  |  |  |  |  |  |  | Refseq | 19053 | 278 | 19331 | 64.84736665548473
Columns correspond to the source of sequence |  |  |  |  |  |  |  |  |  |  |  |  | Multiple | 20062 | 431 | 20493 | 68.74538745387454
 | NIA |  |  |  | National Institute on Aging (NIH) |  |  |  |  |  |  |  | All sources | 26393 | 3417 | 29810 | 100
 | Rik |  |  |  | Riken
 | Ens |  |  |  | Ensembl
 | Ref |  |  |  | Refseq (all sequences, including XM)
 | NM |  |  |  | Refseq NM only
 | + |  |  |  | Sequence from this source is a member of a U-cluster
 |  |  |  |  |  |  |  |  |  |  |  |  | Fig. 1. Number of genes represented in NIA, Riken, [NAME], and [NAME] databases.
 |  |  |  |  |  |  |  |  |  |  |  |  | Blue = | Protein coding genes (ORF >= 100 aa.)
 |  |  |  |  |  |  |  |  |  |  |  |  | Brown = | Multi-exon genes with ORF <100 aa.