Spreadsheet: 07d2940b-b346-49bd-b2c4-e8dacf914408
Sheet: Sheet1

Table S7. Genes that cycle under all eleven diurnal and circadian conditions tested. | Unnamed: 1 | Unnamed: 2 | Unnamed: 3 | Unnamed: 4 | Unnamed: 5 | Unnamed: 6 | Unnamed: 7 | Unnamed: 8 | Unnamed: 9 | Unnamed: 10 | Unnamed: 11 | Unnamed: 12 | Unnamed: 13 | Unnamed: 14
AFFY ID | MIPS ID | DD_DDHC | LL_LDHH-AM | LL_LDHH-SH | LL_LDHC | LL_LLHC | LDHH_SM | LDHH_ST | longday | shortday | LDHC | LLHC | Function | description
261569_at | AT1G01060 | 0 | 22 | 1 | 1 | 2 | 0 | 23 | 1 | 23 | 23 | 2 | [NAME] clock | LHY__similar to myb-related transcription factor (CCA1) [Arabidopsis thaliana] (TAIR:At2g46830.1); similar to LHY protein [Phaseolus vulgaris] (GB:CAD12767.2); contains InterPro domain [NAME] DNA-binding domain (InterPro:IPR001005); contains InterPro domain Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447)
259432_at | [NAME] | 2 | 22 | 0 | 2 | 0 | 1 | 1 | 4 | 4 | 1 | 0 | [NAME] clock associated | [NAME] family transcription factor, similar to myb-related protein GI:2505876 from (Arabidopsis thaliana)
260956_at | AT1G06040 | 1 | 3 | 5 | 5 | 6 | 5 | 4 | 6 | 3 | 4 | 7 | stress | STO__zinc finger (B-box type) family protein / salt-tolerance protein (STO), identical to SP:Q96288 Salt-tolerance protein (Arabidopsis thaliana); contains [NAME] profile PF00643: B-box zinc finger
262629_at | AT1G06460 | 14 | 9 | 11 | 10 | 12 | 9 | 10 | 11 | 7 | 10 | 13 |  | ACD32.1_ACD31.2__31.2 [NAME] heat shock family protein / hsp20 family protein, contains [NAME] profile: PF00011 Hsp20/[NAME] family
256049_at | AT1G07010 | 22 | 19 | 23 | 23 | 23 | 0 | 23 | 3 | 3 | 0 | 0 |  | calcineurin-like phosphoesterase family protein, contains [NAME] profile: PF00149 calcineurin-like phosphoesterase
256060_at | AT1G07050 | 15 | 9 | 12 | 13 | 13 | 10 | 10 | 13 | 8 | 11 | 13 | [NAME] clock associated | CONSTANS-like protein-related, contains similarity to photoperiod sensitivity quantitative trait locus (Hd1) GI:11094203 from (Oryza sativa); similar to Zinc finger protein constans-like 15 (SP:Q9FHH8) {Arabidopsis thaliana}
261417_at | [NAME] | 23 | 0 | 3 | 1 | 1 | 3 | 1 | 3 | 1 | 1 | 2 |  | [NAME] family protein, low similarity to thioredoxin (Gallus gallus) [NAME]; contains [NAME] profile: PF00085 [NAME]
264799_at | AT1G08550 | 19 | 10 | 11 | 12 | 14 | 9 | 14 | 13 | 7 | 11 | 15 |  | NPQ1_AVDE1__similar to violaxanthin de-epoxidase-related [Arabidopsis thaliana] (TAIR:At2g21860.1); similar to violaxanthin de-epoxidase [Camellia sinensis] (GB:AAL67858.2)
264462_at | AT1G10200 | 13 | 10 | 11 | 12 | 14 | 12 | 10 | 15 | 12 | 13 | 15 | transcription | transcription factor [NAME], putative, strong similarity to transcription factor [NAME] (Nicotiana tabacum) GI:5689136, LIM domain protein WLIM-1 (Helianthus annuus) GI:5070280; contains [NAME] profile PF00412: LIM domain
261203_at | AT1G12845 | 14 | 8 | 11 | 10 | 13 | 9 | 9 | 10 | 7 | 10 | 13 | Expressed, unknown | expressed protein
262609_at | [NAME] | 14 | 8 | 11 | 11 | 11 | 9 | 9 | 10 | 6 | 10 | 15 | stress | expressed protein, weakly similar to drought-induced protein SDi-6 (PIR:S71562) common sunflower (fragment)
262526_at | AT1G17050 | 23 | 20 | 23 | 22 | 23 | 2 | 0 | 3 | 4 | 1 | 23 |  | SPS2__geranyl diphosphate synthase, putative / GPPS, putative / dimethylallyltransferase, putative / prenyl transferase, putative, similar to GI:11322965; Except for first 55 amino acids, 52% identical to Prenyl transferase (Cyanophora paradoxa) (gi 99282). Location of est 120E9T7 ([NAME]:T43950)
262536_at | AT1G17100 | 19 | 15 | 18 | 17 | 19 | 16 | 15 | 15 | 6 | 18 | 21 | SOUL heme | SOUL heme-binding family protein, similar to SOUL protein (Mus musculus) GI:4886906; contains [NAME] profile PF04832: SOUL heme-binding protein
264211_at | AT1G22770 | 9 | 7 | 11 | 9 | 10 | 10 | 9 | 9 | 7 | 9 | 11 | [NAME] clock | GI_FB__gigantea protein (GI), identical to gigantea protein SP:Q9SQI2 from (Arabidopsis thaliana)
262296_at | AT1G27630 | 14 | 10 | 13 | 13 | 13 | 9 | 9 | 11 | 8 | 10 | 14 | cell cycle | cyclin family protein, similar to cyclin T1 (Homo sapiens) [NAME]; contains [NAME] profile PF00134: Cyclin, N-terminal domain
261191_at | AT1G32900 | 1 | 21 | 1 | 1 | 1 | 2 | 1 | 3 | 3 | 1 | 23 | starch | starch synthase, putative, similar to starch synthase SP:Q42857 from (Ipomoea batatas)
245242_at | AT1G44446 | 1 | 0 | 4 | 3 | 4 | 3 | 2 | 4 | 1 | 2 | 4 | Photosynthesis | CH1_ATCAO_CAO__chlorophyll a oxygenase (CAO) / chlorophyll b synthase, identical to chlorophyll a oxygenase GI:5853117 from (Arabidopsis thaliana); contains Pfam PF00355 Rieske (2Fe-2S) domain
256221_at | AT1G56300 | 12 | 7 | 11 | 10 | 11 | 9 | 9 | 9 | 7 | 9 | 11 | stress | DNAJ heat shock N-terminal domain-containing protein, similar to SP:Q9QYI7 DnaJ homolog subfamily B member [NAME]; contains [NAME] profile: PF00226: DnaJ domain
264745_at | AT1G62180 | 22 | 18 | 22 | 22 | 23 | 0 | 23 | 2 | 4 | 23 | 23 |  | APR2_APSR_ATAPR2_PRH__5'-adenylylsulfate reductase 2, chloroplast ([NAME]) (APSR) / adenosine 5'-phosphosulfate 5'-adenylylsulfate (APS) sulfotransferase 2 / 3'-phosphoadenosine-5'-phosphosulfate (PAPS) reductase homolog 43 (PRH-43), identical to SP:P92981 5'-adenylylsulfate reductase 2, chloroplast precursor (EC 1.8.4.9) (Adenosine 5'-phosphosulfate 5'-adenylylsulfate sulfotransferase 2) (APS sulfotransferase 2) (Thioredoxin independent APS reductase 2) (3'-phosphoadenosine-5'-phosphosulfate reductase homolog 43) (PAPS reductase homolog 43) (Prh-43) {Arabidopsis thaliana}; identical to cDNA PAPS reductase homolog (PRH43) [NAME]
260412_at | AT1G69830 | 9 | 8 | 11 | 12 | 10 | 11 | 10 | 11 | 8 | 12 | 14 |  | AMY3__Encodes a plastid-localized α-amylase. Expression is reduced in the SEX4 mutant. Loss of function mutations show normal diurnal pattern of starch accumulation/degradation. Expression follows circadian rhythms.
259922_at | AT1G72770 | 0 | 19 | 1 | 23 | 1 | 23 | 23 | 3 | 2 | 23 | 22 |  | HAB1__protein phosphatase 2C P2C-HA / PP2C P2C-HA (P2C-HA), identical to protein phosphatase 2C (AtP2C-HA) GB:AJ003119 (Arabidopsis thaliana) (Plant Mol. Biol. 38 (5), 879-883 (1998))
245734_at | AT1G73480 | 3 | 3 | 4 | 8 | 7 | 6 | 6 | 5 | 3 | 6 | 8 |  | hydrolase, alpha/beta fold family protein, low similarity to monoglyceride lipase from (Homo sapiens) GI:14594904, (Mus musculus) GI:2632162; contains [NAME] profile PF00561: hydrolase, alpha/beta fold family
266119_at | AT2G02100 | 16 | 11 | 16 | 15 | 16 | 12 | 14 | 15 | 14 | 14 | 15 | stress | LCR69_PDF2.2__plant [NAME]-fusion protein, putative ([NAME]), plant [NAME] member, personal communication, [NAME] ([NAME]); similar to SWISS-PROT:O65740
267484_at | AT2G02760 | 12 | 9 | 12 | 11 | 13 | 15 | 14 | 13 | 12 | 12 | 12 | ubiquitin | ATUBC2_UBC2__ubiquitin-conjugating enzyme 2 ([NAME]), E2; identical to gi:2689242, SP:P42745
263345_s_at | AT2G05060;AT2G05070;AT2G05100 | 4 | 2 | 5 | 4 | 5 | 4 | 4 | 5 | 2 | 4 | 6 | Photosynthesis | LHCB2.2__chlorophyll A-B binding protein / LHCII type II (LHCB2.2), identical to Lhcb2 protein (Arabidopsis thaliana) GI:4741946; contains [NAME] profile PF00504: Chlorophyll A-B binding protein
266500_at | AT2G06925 | 13 | 9 | 10 | 11 | 13 | 12 | 10 | 10 | 9 | 13 | 14 |  | ATSPLA2-ALPHA_PLA2-ALPHA__phospholipase A2 family protein, similar to secretory low molecular weight phospholipase A2 beta (Arabidopsis thaliana) GI:25992715; contains INTERPRO domain IPR001211 phospholipase A2
264045_at | [NAME] | 15 | 11 | 13 | 12 | 14 | 14 | 12 | 14 | 14 | 14 | 14 |  | riboflavin biosynthesis protein, putative, similar to SP:P50855 [NAME] biosynthesis protein ribA (Includes: GTP cyclohydrolase II (EC 3.5.4.25); 3,4-dihydroxy-2-butanone 4-phosphate synthase (DHBP synthase)) {Actinobacillus pleuropneumoniae}; contains [NAME] profiles PF00925: GTP cyclohydrolase II, PF00926: 3,4-dihydroxy-2-butanone 4-phosphate synthase
266672_at | AT2G29650 | 5 | 3 | 5 | 6 | 6 | 6 | 5 | 6 | 5 | 6 | 6 |  | inorganic phosphate transporter, putative, similar to brain specific Na+-dependent inorganic phosphate cotransporter (Rattus norvegicus) GI:507415; contains [NAME] profile PF00083: major facilitator superfamily protein
267517_at | AT2G30520 | 22 | 23 | 2 | 1 | 3 | 0 | 23 | 1 | 23 | 0 | 3 | Light signaling | RPT2__similar to phototropic-responsive NPH3 family protein [Arabidopsis thaliana] (TAIR:At5g48800.1); similar to Hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:AAN77296.1); contains InterPro domain NPH3 (InterPro:IPR004249)
265959_at | AT2G37240 | 23 | 20 | 22 | 23 | 1 | 3 | 3 | 5 | 5 | 2 | 0 | Expressed, unknown | expressed protein, weak similarity to fmHP (GI:22902096) (Takifugu rubripes)
266097_at | AT2G37970 | 23 | 22 | 1 | 1 | 0 | 1 | 23 | 3 | 5 | 22 | 23 | SOUL heme | SOUL heme-binding family protein, weak similarity to SOUL protein (Mus musculus) GI:4886906; contains [NAME] profile PF04832: SOUL heme-binding protein
267364_at | [NAME] | 14 | 12 | 14 | 14 | 15 | 11 | 10 | 13 | 8 | 11 | 14 | [NAME] clock | ELF4__expressed protein
263823_s_at | AT2G40340;AT2G40350 | 12 | 8 | 12 | 11 | 13 | 10 | 10 | 12 | 8 | 10 | 13 | stress | encodes a member of the DREB subfamily A-2 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are eight members in this subfamily including DREB2A AND DREB2B that are involved in response to drought.
263805_at | AT2G40400 | 0 | 22 | 0 | 1 | 0 | 3 | 5 | 2 | 3 | 1 | 1 | Expressed, unknown | expressed protein, similar to GI:7572912 (At3g56140)(Arabidopsis thaliana)
267505_at | AT2G45560 | 14 | 6 | 9 | 9 | 14 | 8 | 9 | 9 | 7 | 9 | 10 | hormone | CYP76C1__cytochrome P450 family protein
266719_at | AT2G46830 | 1 | 23 | 1 | 1 | 2 | 1 | 1 | 1 | 0 | 1 | 2 | [NAME] clock | CCA1__myb-related transcription factor ([NAME]), identical to myb-related transcription factor (CCA1) GI:4090569 from (Arabidopsis thaliana)
245152_at | AT2G47490 | 1 | 21 | 1 | 1 | 1 | 1 | 0 | 1 | 0 | 23 | 23 |  | mitochondrial substrate carrier family protein, contains [NAME] profile: PF00153 mitochondrial carrier protein
258497_at | AT3G02380 | 1 | 22 | 2 | 1 | 2 | 1 | 23 | 1 | 23 | 23 | 2 | [NAME] clock associated | COL2__zinc finger protein CONSTANS-LIKE 2 (COL2), identical to putative flowering-time gene CONSTANS (COL2) GB:AAB67879 GI:1507699 SP:Q96502 (Arabidopsis thaliana)
259244_at | AT3G07650 | 15 | 10 | 15 | 15 | 15 | 17 | 16 | 17 | 14 | 15 | 14 | [NAME] clock associated | COL9__similar to zinc finger (B-box type) family protein [Arabidopsis thaliana] (TAIR:At5g48250.1); similar to CONSTANS-like protein [Ipomoea nil] (GB:AAG24863.1); contains InterPro domain Zn-finger, CONSTANS type (InterPro:IPR002926); contains InterPro domain Zn-finger, B-box (InterPro:IPR000315)
258970_at | AT3G10410 | 17 | 12 | 14 | 15 | 15 | 15 | 13 | 14 | 9 | 14 | 18 |  | SCPL49__serine carboxypeptidase III, putative, similar to serine carboxypeptidase III from Oryza sativa SP:P37891, [NAME] chamomilla GI:6960455, [NAME]P21529, Triticum aestivum SP:P11515; contains [NAME] profile PF0450 serine carboxypeptidase
256266_at | AT3G12320 | 1 | 1 | 3 | 3 | 5 | 2 | 2 | 3 | 1 | 2 | 5 | Expressed, unknown | expressed protein
258349_at | AT3G17609 | 22 | 21 | 23 | 0 | 23 | 23 | 23 | 1 | 0 | 22 | 23 | Light signaling | similar to bZIP [NAME]) [Arabidopsis thaliana] (TAIR:At5g11260.1); similar to putative bZIP protein HY5 [Oryza sativa (japonica cultivar-group)] (GB:BAD32844.1); contains InterPro domain Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827)
257985_at | AT3G20810 | 15 | 11 | 15 | 14 | 14 | 13 | 13 | 13 | 14 | 14 | 14 | transcription | similar to transcription factor [NAME] ([NAME]) domain-containing protein [Arabidopsis thaliana] (TAIR:At5g19840.1); similar to hypothetical protein LOC77035 [Mus musculus] (GB:NP_084118.1); contains InterPro domain Transcription factor [NAME], [NAME] (InterPro:IPR003347)
256861_at | AT3G23920 | 0 | 20 | 21 | 0 | 0 | 23 | 23 | 3 | 3 | 0 | 23 |  | BMY7__beta-amylase, putative / 1,4-alpha-D-glucan maltohydrolase, putative, similar to beta-amylase enzyme (Arabidopsis thaliana) GI:6065749, beta-amylase PCT-BMYI from ([NAME] tuberosum); contains [NAME] profile PF01373: Glycosyl hydrolase family 14
258239_at | AT3G27690 | 5 | 0 | 4 | 5 | 5 | 5 | 4 | 6 | 2 | 5 | 5 | Photosynthesis | LHCB2:4_LHCB2.3__chlorophyll A-B binding protein (LHCB2:4), nearly identical to Lhcb2 protein (Arabidopsis thaliana) GI:4741950; similar to chlorophyll A-B binding protein 151 precursor (LHCP) GB:P27518 from (Gossypium hirsutum); contains [NAME] PF00504: Chlorophyll A-B binding protein
252468_at | AT3G46970 | 15 | 10 | 12 | 12 | 13 | 10 | 10 | 12 | 8 | 12 | 16 |  | ATPHS2_PHS2__Encodes a cytosolic alpha-glucan phosphorylase.
252429_at | AT3G47500 | 1 | 3 | 6 | 3 | 6 | 4 | 4 | 5 | 2 | 2 | 6 | Light signaling, flowering | CDF3__Dof-type zinc finger domain-containing protein, identical to H-protein promoter binding factor-2a GI:3386546 from (Arabidopsis thaliana). Interacts with LKP2 and [NAME], but its overexpression does not change flowering time under short or long day conditions.
252391_at | AT3G47860 | 13 | 11 | 14 | 14 | 15 | 14 | 14 | 14 | 9 | 13 | 15 |  | apolipoprotein D-related, contains weak similarity to Apolipoprotein D precursor (ApoD) (Swiss-Prot:P51910) (Mus musculus)
251919_at | AT3G53800 | 11 | 7 | 10 | 9 | 10 | 8 | 9 | 9 | 7 | 9 | 10 |  | armadillo/beta-catenin repeat family protein, contains [NAME] profile: PF00514 armadillo/beta-catenin-like repeat
251869_at | AT3G54500 | 5 | 1 | 3 | 1 | 5 | 1 | 1 | 2 | 0 | 2 | 5 | Expressed, unknown | expressed protein
251814_at | AT3G54890 | 5 | 5 | 6 | 7 | 7 | 6 | 5 | 8 | 5 | 7 | 7 | Photosynthesis | LHCA1__chlorophyll A-B binding protein / LHCI type I (CAB), identical to chlorophyll A/B-binding protein (Arabidopsis thaliana) GI:16207; contains [NAME] profile: PF00504 chlorophyll A-B binding protein
251753_at | AT3G55760 | 5 | 8 | 11 | 10 | 10 | 10 | 9 | 10 | 7 | 10 | 15 | Expressed, unknown | expressed protein
251497_at | AT3G59060 | 6 | 2 | 5 | 5 | 7 | 3 | 2 | 5 | 2 | 3 | 7 | Light signaling | PIL6_PIF5__similar to phytochrome-interacting factor 4 (PIF4) / basic helix-loop-helix protein 9 (bHLH9) / short under red-light 2 (SRL2) [Arabidopsis thaliana] (TAIR:At2g43010.1); similar to BP-5 protein [Oryza sativa] (GB:CAD32238.1); contains InterPro domain Basic helix-loop-helix dimerization domain bHLH (InterPro:IPR001092)
255403_at | AT4G03400 | 16 | 5 | 7 | 7 | 9 | 6 | 5 | 6 | 5 | 7 | 9 | hormone | DFL2_GH3-10__auxin-responsive GH3 family protein, similar to auxin-responsive GH3 product (Glycine max) GI:18591; contains [NAME] profile PF03321: GH3 auxin-responsive promoter
255331_at | AT4G04330 | 13 | 9 | 10 | 12 | 14 | 9 | 14 | 10 | 9 | 10 | 13 | Expressed, unknown | expressed protein
254835_s_at | [NAME] | 18 | 12 | 15 | 15 | 17 | 9 | 11 | 15 | 6 | 11 | 17 | hormone | CYP706A5__similar to cytochrome P450, putative [Arabidopsis thaliana] (TAIR:At4g12320.1); similar to putative flavonoid 3',5'-hydroxylase [Oryza sativa (japonica cultivar-group)] (GB:[NAME]); contains InterPro domain E-class P450, group I (InterPro:IPR002401); contains InterPro domain Cytochrome P450 (InterPro:IPR001128)
245602_at | AT4G14270 | 12 | 8 | 11 | 10 | 10 | 9 | 9 | 10 | 7 | 10 | 10 | stress | similar to dehydration-induced protein (ERD15) [Arabidopsis thaliana] (TAIR:At2g41430.2); similar to dehydration-induced protein (ERD15) [Arabidopsis thaliana] (TAIR:At2g41430.3); similar to dehydration-induced protein (ERD15) [Arabidopsis thaliana] (TAIR:At2g41430.4); similar to dehydration-induced protein (ERD15) [Arabidopsis thaliana] (TAIR:At2g41430.1); similar to early response to dehydration 15-like protein [Pseudotsuga menziesii var. menziesii] (GB:AAV92278.1); similar to early response to dehydration 15-like protein [Pseudotsuga menziesii var. menziesii] (GB:AAV92296.1)
245319_at | AT4G16146 | 14 | 11 | 13 | 13 | 15 | 10 | 11 | 12 | 8 | 11 | 14 | Expressed, unknown | expressed protein
254035_at | AT4G25970 | 13 | 9 | 12 | 10 | 10 | 9 | 9 | 14 | 13 | 12 | 13 |  | PSD2__similar to phosphatidylserine decarboxylase, putative [Arabidopsis thaliana] (TAIR:At5g57190.1); similar to putative phosphatidylserine decarboxylase [Oryza sativa (japonica cultivar-group)] (GB:NP_914239.1); contains InterPro domain [NAME] decarboxylase (InterPro:IPR005221); contains InterPro domain [NAME] decarboxylase-related (InterPro:IPR003817); contains InterPro domain Calcium-binding EF-hand (InterPro:IPR002048)
253421_at | AT4G32340 | 14 | 10 | 12 | 13 | 14 | 10 | 10 | 12 | 11 | 12 | 14 | Expressed, unknown | expressed protein
250971_at | [NAME] | 6 | 6 | 7 | 7 | 9 | 6 | 6 | 7 | 6 | 7 | 9 | [NAME] clock | PRR7__pseudo-response regulator 7 ([NAME]), identical to pseudo-response regulator 7 GI:10281004 from (Arabidopsis thaliana)
250926_at | AT5G03555 | 23 | 20 | 0 | 23 | 1 | 23 | 23 | 1 | 23 | 23 | 0 |  | permease, cytosine/purines, uracil, thiamine, allantoin family protein, contains [NAME] PF02133: permease, cytosine/purines, uracil, thiamine, allantoin family
250665_at | AT5G06980 | 2 | 2 | 3 | 2 | 5 | 2 | 2 | 3 | 1 | 2 | 6 | Expressed, unknown | expressed protein
250155_at | AT5G15160 | 9 | 6 | 5 | 7 | 5 | 6 | 6 | 7 | 1 | 5 | 8 | transcription | [NAME] family protein
250110_at | AT5G15350 | 1 | 2 | 3 | 3 | 6 | 22 | 23 | 22 | 18 | 1 | 7 |  | plastocyanin-like domain-containing protein, contains plastocyanin-like domain [NAME]:PF02298
246554_at | AT5G15450 | 1 | 20 | 21 | 23 | 0 | 3 | 4 | 4 | 4 | 3 | 0 | stress | heat shock protein 100, putative / HSP100, putative / heat shock protein clpB, putative / HSP100/ClpB, putative, similar to HSP100/ClpB GI:9651530 (Phaseolus lunatus)
246487_at | AT5G16030 | 4 | 3 | 6 | 5 | 7 | 4 | 2 | 3 | 23 | 5 | 7 |  | similar to expressed protein [Arabidopsis thaliana] (TAIR:At3g02500.1); similar to conserved protein [Cryptosporidium parvum] (GB:EAK89575.1)
250095_at | AT5G17230 | 20 | 18 | 22 | 22 | 2 | 23 | 21 | 22 | 22 | 0 | 22 |  | PSY__similar to phytoene synthase [Capsicum annuum] (GB:CAA48155.1); contains InterPro domain [NAME]/phytoene synthase (InterPro:IPR002060)
250099_at | AT5G17300 | 23 | 23 | 1 | 1 | 0 | 0 | 23 | 0 | 22 | 23 | 0 | [NAME] clock associated | [NAME] family transcription factor, similar to [NAME] (Arabidopsis thaliana) GI:4090569; contains [NAME] profile PF00249: Myb-like DNA-binding domain
246004_at | AT5G20630 | 15 | 12 | 16 | 15 | 17 | 15 | 15 | 16 | 14 | 15 | 17 |  | GLP3__germin-like protein (GER3), identical to germin-like protein subfamily 3 member 3 (SP:P94072)
259990_s_at | AT5G23410;AT1G68050;AT5G42730 | 11 | 10 | 13 | 12 | 13 | 10 | 9 | 10 | 8 | 10 | 13 | flowering | FKF1_ADO3__F-box family protein (FKF1) / adagio 3 (ADO3), E3 ubiquitin ligase SCF complex F-box subunit; identical to [NAME] and Adagio 3 GI:13487072 from (Arabidopsis thaliana); contains [NAME] profiles PF01344: Kelch motif, PF00785: PAC motif and PF00646: F-box domain; contains TIGRfam profile TIGR00229: PAS domain S-boxidentical to cDNA Adagio 3 (ADO3) GI:13487071
249769_at | AT5G24120 | 5 | 23 | 3 | 0 | 2 | 2 | 1 | 4 | 3 | 2 | 1 | Chloroplast | SIGE_SIG5__RNA polymerase sigma subunit SigE (sigE) / sigma-like factor (SIG5), identical to RNA polymerase sigma subunit SigE (Arabidopsis thaliana) GI:4972299, sigma-like factor (Arabidopsis thaliana) GI:4033838; contains [NAME] profiles PF04545: [NAME], region 4, PF04539: Sigma-70 region 3, PF04542: [NAME] region 2
249741_at | AT5G24470 | 11 | 7 | 9 | 9 | 10 | 8 | 8 | 9 | 8 | 8 | 10 | [NAME] clock | APRR5_PRR5__pseudo-response regulator 5 (APRR5), identical to pseudo-response regulator 5 GI:10281006 from (Arabidopsis thaliana)
246829_at | AT5G26570 | 18 | 11 | 14 | 14 | 15 | 10 | 14 | 13 | 9 | 13 | 16 | starch | ATGWD3_PWD_ATGWD3_OK1__similar to starch excess protein (SEX1) [Arabidopsis thaliana] (TAIR:At1g10760.1); similar to starch associated protein R1 [Solanum tuberosum] (GB:AAK11735.1); contains InterPro domain Glycoside hydrolase, starch-binding domain (InterPro:IPR002044)
249606_at | AT5G37260 | 20 | 15 | 18 | 20 | 19 | 20 | 20 | 20 | 18 | 20 | 19 | [NAME] clock associated | [NAME] family transcription factor, contains [NAME] profile: PF00249 myb-like DNA-binding domain
249456_at | AT5G39410 | 13 | 11 | 14 | 13 | 16 | 12 | 12 | 13 | 11 | 13 | 16 | Expressed, unknown | expressed protein
249174_at | AT5G42900 | 14 | 9 | 11 | 12 | 13 | 12 | 10 | 12 | 12 | 14 | 13 | Expressed, unknown | expressed protein, similar to expressed protein [Arabidopsis thaliana] (TAIR:At4g33980.1)
248744_at | AT5G48250 | 14 | 10 | 14 | 13 | 15 | 9 | 9 | 13 | 8 | 13 | 14 | [NAME] clock associated | zinc finger (B-box type) family protein, contains similarity to CONSTANS homologs
248669_at | AT5G48730 | 17 | 12 | 14 | 15 | 18 | 11 | 12 | 16 | 9 | 12 | 19 |  | pentatricopeptide (PPR) repeat-containing protein, contains [NAME] profile PF01535: PPR repeat
248311_at | AT5G52570 | 5 | 21 | 1 | 1 | 2 | 2 | 1 | 3 | 2 | 1 | 1 |  | BETA-OHASE 2_B2__beta-carotene hydroxylase, putative, similar to GI:1575296, beta-carotene hydroxylase
248138_at | AT5G54960 | 14 | 13 | 14 | 14 | 17 | 9 | 9 | 13 | 6 | 9 | 17 |  | PDC2__pyruvate decarboxylase, putative, strong similarity to pyruvate decarboxylase 1 (Vitis vinifera) GI:10732644; contains InterPro entry IPR000399: Pyruvate decarboxylase
247766_at | AT5G58870 | 1 | 21 | 3 | 1 | 1 | 2 | 1 | 3 | 3 | 2 | 2 | Chloroplast | FTSH9__encodes an FtsH protease that is localized to the chloroplast
252475_s_at | AT5G59570;AT3G46640 | 14 | 10 | 14 | 13 | 15 | 11 | 10 | 13 | 9 | 11 | 13 | [NAME] clock | LUX_PCL1__similar to myb family transcription factor [Arabidopsis thaliana] (TAIR:At5g59570.1); similar to induced protein MgI1 [Oryza sativa (japonica cultivar-group)] (GB:AAS90600.1); contains InterPro domain [NAME] DNA-binding domain (InterPro:IPR001005); contains InterPro domain Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447)
247525_at | AT5G61380 | 15 | 10 | 14 | 14 | 14 | 11 | 10 | 13 | 9 | 12 | 13 | [NAME] clock | TOC1_APRR1_PRR1__ABI3-interacting protein 1 (AIP1), identical to pseudo-response regulator 1 GI:7576354 from (Arabidopsis thaliana); timing of CAB expression 1 protein (TOC1) GI:9247019; contains [NAME] profile PF00072: Response regulator receiver domain; identical to cDNA ABI3-interacting protein 1 (aip1 gene) GI:6996312
247443_at | AT5G62720 | 12 | 10 | 13 | 14 | 15 | 12 | 14 | 14 | 12 | 13 | 12 |  | integral membrane HPP family protein, contains [NAME] domain, PF04982: HPP family
247323_at | AT5G64170 | 5 | 2 | 3 | 5 | 5 | 5 | 5 | 5 | 3 | 5 | 5 |  | [NAME], contains weak similarity to Swiss-Prot:Q9NZW4 dentin sialophosphoprotein precursor (Homo sapiens)
247232_at | AT5G64940 | 1 | 22 | 2 | 0 | 2 | 1 | 1 | 2 | 2 | 1 | 2 |  | ATATH13__ABC1 family protein, contains [NAME] domain, PF03109: ABC1 family