Spreadsheet: b205c3aa-b317-42d5-baf0-d7bb40705529
Sheet: Sheet1

A new sample is predicted as high (low) risk if its prognostic index is larger than (smaller than or equal to) 0.008756. | Unnamed: 1 | Unnamed: 2 | Unnamed: 3 | Unnamed: 4 | Unnamed: 5 | Unnamed: 6 | Unnamed: 7 | Unnamed: 8 | Unnamed: 9 | Unnamed: 10 | Unnamed: 11 | Unnamed: 12
The prognostic index can be computed by the simple formula ∑iwi xi + 12.1327 where wi and xi are the weight and logged gene expression for the i-th gene.
# | Gene Id | Loading matrix |  |  |  |  | Correlation |  |  |  |  | Weights (wi)
 |  | Components |  |  |  |  | Components
 |  | 1 | 2 | 3 | 4 | 5 | 1 | 2 | 3 | 4 | 5
1 | FKBP7 | 0.003593 | -0.002045 | -0.003838 | -0.009202 | 0.006932 | 0.561325 | -0.153331 | -0.162969 | -0.376429 | 0.200115 | 0.016723
2 | WDR7 | -0.002675 | -0.002584 | 0.001728 | 0.003175 | 0.004196 | -0.570766 | -0.264665 | 0.100209 | 0.177423 | 0.165448 | -0.028356
3 | PPCDC | -0.003006 | -0.00069 | 0.001503 | -0.00135 | 0.006045 | -0.540074 | -0.059489 | 0.073425 | -0.063511 | 0.200753 | -0.047012
4 | [NAME] | -0.004395 | -0.004742 | 0.006134 | -0.007347 | -0.004681 | -0.518396 | -0.268437 | 0.196662 | -0.226933 | -0.102039 | -0.056761
5 | ITGB7 | -0.003412 | -0.002788 | -0.005652 | -0.001043 | -0.009441 | -0.557791 | -0.2188 | -0.25117 | -0.044641 | -0.285209 | -0.018025
6 | CACNA1B | -0.002757 | 0.000188 | 0.001089 | 0.003525 | 0.005829 | -0.50494 | 0.0165 | 0.054217 | 0.169047 | 0.197285 | -0.034445
7 | OR51I1 | -0.00787 | -0.010991 | -0.01297 | -0.001764 | -0.014048 | -0.676008 | -0.453134 | -0.302868 | -0.03968 | -0.222999 | -0.046162
8 | SMPD2 | -0.003891 | 0.001872 | 0.007724 | -0.003101 | -0.006294 | -0.490844 | 0.113343 | 0.26486 | -0.102436 | -0.146731 | -0.049899
9 | TRO | 0.00343 | -0.000439 | 0.00161 | 0.000399 | 0.005307 | 0.496784 | -0.03049 | 0.063375 | 0.015134 | 0.142037 | 0.031061
10 | MXD1 | -0.003709 | -0.001267 | -0.001207 | 0.004283 | 0.010649 | -0.550847 | -0.09029 | -0.04872 | 0.166546 | 0.292243 | -0.047501
11 | LIN28 | 0.001373 | 0.001532 | 0.002838 | -0.000769 | 0.003324 | 0.176097 | 0.094357 | 0.098983 | -0.025839 | 0.078807 | 0.004479
12 | SEPN1 | -0.003756 | -0.004502 | 0.003671 | 0.00378 | 0.00793 | -0.608463 | -0.350101 | 0.161698 | 0.160378 | 0.237433 | -0.044241
13 | ODF4 | -0.00376 | -0.002961 | -0.004536 | 0.003488 | 0.013961 | -0.591616 | -0.223634 | -0.19402 | 0.143737 | 0.405992 | -0.049973
14 | C14orf121 | -0.001623 | 0.000771 | 0.004233 | 0.002397 | 0.004257 | -0.399672 | 0.091103 | 0.28343 | 0.154594 | 0.193754 | -0.024671
15 | C1QTNF3 | 0.0045 | -0.007863 | -0.012384 | -0.008943 | 0.010125 | 0.436876 | -0.366356 | -0.326796 | -0.227348 | 0.181648 | 0.037462
16 | C1orf151 | -0.004521 | -0.005558 | -0.016266 | -0.008199 | -0.011027 | -0.466007 | -0.275009 | -0.455829 | -0.221347 | -0.210065 | -0.030989
17 | ATP5D | -0.003326 | 0.000266 | 0.009615 | -0.004061 | -0.00633 | -0.417916 | 0.016067 | 0.328404 | -0.133602 | -0.146971 | -0.044694
18 | [NAME] | -0.003421 | -0.002258 | 0.001744 | 0.000717 | 0.004806 | -0.641764 | -0.203316 | 0.088944 | 0.035222 | 0.166585 | -0.043498
19 | CACNG6 | -0.003255 | -2.7e-05 | 0.001867 | -0.001524 | 0.004164 | -0.527953 | -0.002103 | 0.08233 | -0.06474 | 0.124803 | -0.048479
20 | ZNF569 | 0.001263 | 0.002144 | 0.000263 | 0.002612 | 0.00324 | 0.23667 | 0.192806 | 0.013374 | 0.128157 | 0.112188 | 0.011689
21 | MFAP2 | 0.0055 | -0.00364 | 0.002089 | -0.000884 | 0.015032 | 0.60375 | -0.191794 | 0.062332 | -0.02542 | 0.304918 | 0.040772
22 | PTCH2 | -0.002569 | -0.000182 | 0.000771 | 0.001997 | 0.006581 | -0.406517 | -0.0138 | 0.033179 | 0.082751 | 0.192464 | -0.035928
23 | C1orf159 | -0.002535 | 0.000284 | 0.002283 | 0.002701 | 0.006596 | -0.609686 | 0.032795 | 0.149259 | 0.170068 | 0.293127 | -0.035935
24 | C16orf50 | -0.003293 | -0.001425 | 0.001327 | 0.000767 | 0.007185 | -0.711353 | -0.147781 | 0.07791 | 0.043372 | 0.286867 | -0.046481
25 | GNAZ | -0.002236 | -0.002402 | 0.002593 | 0.002639 | 0.008071 | -0.479358 | -0.247152 | 0.151125 | 0.148187 | 0.319804 | -0.031503
26 | CES2 | -0.002837 | -0.003338 | 0.004206 | 0.001638 | -0.00058 | -0.509775 | -0.287879 | 0.205407 | 0.077078 | -0.019246 | -0.026869
27 | SCO2 | -0.003336 | 0.001705 | -0.008187 | -0.005669 | -0.00204 | -0.484828 | 0.118945 | -0.323508 | -0.215768 | -0.054809 | -0.042711
28 | PTPRN2 | -0.003362 | 0.000881 | 0.002926 | 0.00013 | 0.002864 | -0.546847 | 0.068785 | 0.129358 | 0.005529 | 0.086081 | -0.04627
29 | NANOS1 | 0.004202 | 0.002893 | 0.003624 | -0.001532 | 0.011105 | 0.49157 | 0.162417 | 0.115244 | -0.046945 | 0.240058 | 0.020503
30 | ZNF521 | 0.005776 | -0.017689 | 0.00306 | -0.007294 | 0.005201 | 0.441891 | -0.649568 | 0.063644 | -0.146137 | 0.073527 | 0.064506
31 | RIT1 | 0.004355 | 0.005748 | -0.010358 | -0.004094 | 0.002829 | 0.551287 | 0.34926 | -0.356457 | -0.135737 | 0.066198 | 0.037112
32 | KIAA0141 | -0.002413 | -0.003325 | 0.003774 | -0.003236 | -0.001809 | -0.33086 | -0.218859 | 0.140683 | -0.116186 | -0.04585 | -0.030009
33 | RIN1 | -0.003635 | -0.003695 | 0.003644 | -0.003381 | -0.004307 | -0.571541 | -0.278897 | 0.155768 | -0.139244 | -0.125149 | -0.039753
34 | TMEM45A | 0.007611 | -0.005441 | -0.008707 | -0.013584 | 0.024353 | 0.627077 | -0.215155 | -0.195011 | -0.293089 | 0.370816 | 0.034613
35 | ZBTB8 | 0.003806 | 0.002364 | -0.001354 | 0.000227 | -1e-06 | 0.631692 | 0.188309 | -0.061071 | 0.009871 | -4.1e-05 | 0.041863
36 | [NAME] | -0.001922 | 0.000419 | -0.010931 | -0.006536 | -0.000214 | -0.261869 | 0.027378 | -0.404793 | -0.233135 | -0.005389 | -0.027275
37 | C1orf68 | -0.002243 | 0.001301 | -0.002022 | -0.00267 | 0.011377 | -0.344384 | 0.095897 | -0.084391 | -0.10737 | 0.322865 | -0.049386
38 | ACSM1 | -0.002101 | -0.001223 | 0.000437 | -0.001099 | 0.00571 | -0.515556 | -0.144023 | 0.02914 | -0.070575 | 0.258901 | -0.034021
39 | LRSAM1 | -0.00321 | -0.002465 | 0.000851 | 0.004442 | -0.000358 | -0.652452 | -0.240522 | 0.047032 | 0.23646 | -0.01345 | -0.024104
40 | C10orf80 | -0.001869 | -0.001591 | 0.002469 | 0.000253 | -2.3e-05 | -0.34855 | -0.142415 | 0.125148 | 0.012374 | -0.000801 | -0.020605
41 | AGPAT7 | -0.002375 | -0.002677 | 0.004039 | 0.000274 | 0.002453 | -0.549187 | -0.297099 | 0.253887 | 0.016611 | 0.104796 | -0.030006
42 | NCR2 | -0.002235 | -0.004203 | -0.000707 | 0.003152 | -0.000622 | -0.500364 | -0.451714 | -0.043037 | 0.184837 | -0.025725 | -0.011604
43 | TMEM150 | -0.001666 | 0.001116 | 0.002456 | 0.000649 | 0.005418 | -0.420871 | 0.135349 | 0.168655 | 0.042905 | 0.252885 | -0.029738
44 | FGFR1OP2 | 0.003797 | 0.005376 | -0.006839 | -0.001486 | 0.000247 | 0.453597 | 0.308243 | -0.222076 | -0.04649 | 0.005455 | 0.037995
45 | PRELP | 0.00408 | -0.028508 | 0.013141 | -0.00292 | -0.009847 | 0.243963 | -0.818177 | 0.213607 | -0.045725 | -0.108817 | 0.084866
46 | OR2AG1 | -0.003638 | -0.002515 | -0.001569 | 0.004562 | 0.012622 | -0.611124 | -0.202793 | -0.071651 | 0.200656 | 0.391824 | -0.047197
47 | HIPK1 | -0.001448 | -0.0007 | 0.002095 | 0.002199 | 0.000707 | -0.435602 | -0.100992 | 0.171275 | 0.173209 | 0.0393 | -0.01377
48 | OSGEPL1 | 0.002932 | 0.002535 | -0.005502 | 0.001369 | -0.000348 | 0.432294 | 0.179438 | -0.22054 | 0.052854 | -0.009497 | 0.037881
49 | KLF12 | 0.001595 | -0.002828 | 0.005231 | 0.003387 | 0.000261 | 0.327485 | -0.278798 | 0.292021 | 0.182141 | 0.009889 | 0.024693
50 | FEZ1 | 0.002 | -0.004965 | -0.003567 | -0.00399 | 0.005644 | 0.333006 | -0.396843 | -0.161477 | -0.17397 | 0.173673 | 0.015295
51 | CRYBB1 | -0.002433 | -0.001456 | 0.000115 | 0.003255 | 0.004528 | -0.500602 | -0.143779 | 0.006412 | 0.175376 | 0.172153 | -0.026214
52 | CDH19 | -0.002666 | -0.001028 | 0.004613 | 0.00093 | 0.003792 | -0.462565 | -0.085647 | 0.217585 | 0.042273 | 0.121596 | -0.036789
53 | OR9G9 | -0.00243 | 0.002154 | 0.001972 | 0.003441 | 0.01053 | -0.385933 | 0.164197 | 0.085159 | 0.14315 | 0.309117 | -0.04169
54 | FGFBP1 | -0.006594 | 0.006098 | 0.015302 | -0.051874 | 0.005662 | -0.391765 | 0.17389 | 0.247147 | -0.807106 | 0.062168 | -0.214211
55 | KDELR2 | 0.004275 | 0.001598 | -0.006722 | -0.005692 | -0.000483 | 0.477895 | 0.085734 | -0.20428 | -0.166631 | -0.009981 | 0.040873
56 | ZNF12 | 0.002605 | 0.000265 | 0.001797 | 0.001135 | -0.007459 | 0.378632 | 0.018461 | 0.071012 | 0.043184 | -0.200344 | 0.042151
57 | MUTYH | -0.001643 | -0.000216 | 0.005325 | 0.003462 | -0.000213 | -0.334752 | -0.021133 | 0.294964 | 0.184718 | -0.008015 | -0.015135
58 | OR51B5 | -0.002831 | 0.002067 | -0.009554 | -0.001212 | 0.013158 | -0.426689 | 0.149484 | -0.391424 | -0.047839 | 0.366474 | -0.050902
59 | SPATA13 | -0.003584 | -0.000663 | 0.003259 | 0.003909 | 0.00926 | -0.59438 | -0.05274 | 0.146923 | 0.169747 | 0.283776 | -0.049069
60 | [NAME] | -0.002766 | -0.001832 | 0.002746 | 0.004878 | 0.005775 | -0.552238 | -0.1756 | 0.149042 | 0.255038 | 0.21309 | -0.030149
61 | AAK1 | -0.002969 | -0.004899 | 0.006133 | 0.000256 | 0.003457 | -0.447329 | -0.354279 | 0.251218 | 0.010106 | 0.096254 | -0.037029
62 | OSM | -0.002439 | -0.007488 | -0.001765 | 0.001722 | -0.008299 | -0.249833 | -0.368184 | -0.049161 | 0.046179 | -0.157112 | 0.000511
63 | CPE | 0.00641 | -0.010626 | -0.02331 | -0.009736 | -0.011341 | 0.462841 | -0.368258 | -0.457543 | -0.184098 | -0.151333 | 0.103986
64 | LRRC17 | 0.005756 | -0.006424 | 0.003195 | -0.003719 | 0.020521 | 0.528191 | -0.282957 | 0.079714 | -0.089377 | 0.34803 | 0.032034
65 | PPAP2B | 0.006712 | -0.006177 | 0.027721 | 0.002847 | -0.017729 | 0.490729 | -0.216764 | 0.550962 | 0.054518 | -0.239557 | 0.097121
66 | C20orf32 | -0.004293 | -0.005884 | -0.016675 | 0.001618 | -0.002973 | -0.492301 | -0.323877 | -0.519824 | 0.048585 | -0.062998 | -0.019626
67 | TUBB4 | -0.003357 | -0.004548 | -0.000975 | 0.002334 | 0.010648 | -0.55852 | -0.363171 | -0.044118 | 0.101685 | 0.327387 | -0.04323
68 | [NAME] | -0.003596 | -0.004613 | -0.00248 | 0.003647 | 0.001413 | -0.592558 | -0.364782 | -0.111061 | 0.157333 | 0.043025 | -0.027375
69 | CCL28 | 0.005099 | 0.00762 | -0.004869 | -0.000489 | -0.021534 | 0.414725 | 0.297489 | -0.107653 | -0.010406 | -0.32369 | 0.084627
70 | C1orf198 | 0.004898 | -0.007457 | 0.008046 | 0.001612 | 0.008557 | 0.529852 | -0.387177 | 0.236585 | 0.045675 | 0.171048 | 0.049841
71 | KRT10 | 0.00431 | 0.001816 | -0.000957 | -0.009604 | 0.000723 | 0.560155 | 0.113289 | -0.033802 | -0.326835 | 0.017362 | 0.02624
72 | JAK2 | -0.002583 | -0.00155 | -0.007656 | -0.002817 | 0.000925 | -0.505871 | -0.145671 | -0.407524 | -0.14447 | 0.033459 | -0.028708
73 | WNT16 | -0.002775 | -0.001245 | 0.001262 | -0.001395 | -0.002306 | -0.454535 | -0.097877 | 0.056206 | -0.059823 | -0.069781 | -0.030362
74 | METTL4 | -0.002374 | -0.00261 | 0.00148 | 0.000992 | 0.007658 | -0.365841 | -0.19308 | 0.061985 | 0.040024 | 0.218081 | -0.034728
75 | SIGLEC8 | -0.002659 | -0.001858 | -0.0044 | -0.005882 | 0.002925 | -0.454771 | -0.152535 | -0.204626 | -0.263477 | 0.092465 | -0.041343
76 | SYT11 | 0.004115 | -0.001002 | -0.000206 | 0.005953 | 0.012218 | 0.495798 | -0.057929 | -0.006764 | 0.187835 | 0.272055 | 0.041934
77 | KLHL7 | 0.002136 | 0.00362 | -0.003505 | -0.002711 | 0.001699 | 0.425299 | 0.346015 | -0.18976 | -0.141396 | 0.062525 | 0.013869
78 | OR6F1 | -0.001885 | -0.000202 | -0.001939 | -0.001546 | -0.000288 | -0.345967 | -0.017828 | -0.096744 | -0.074309 | -0.00976 | -0.022555
79 | PKHD1 | -0.001548 | -1e-05 | -0.000122 | -0.001225 | 0.000747 | -0.395144 | -0.001236 | -0.008439 | -0.081897 | 0.035218 | -0.021366
80 | OR4C15 | -0.002616 | -0.002229 | 0.002841 | 0.002813 | 0.012035 | -0.479983 | -0.196285 | 0.141693 | 0.135115 | 0.408006 | -0.042174
81 | DDB2 | -0.002523 | 0.000427 | 0.004196 | -0.014809 | -0.013324 | -0.262453 | 0.021303 | 0.118656 | -0.403462 | -0.25617 | -0.043004
82 | BAX | -0.000916 | 0.002507 | 0.003123 | -0.003436 | 0.001097 | -0.187397 | 0.246091 | 0.173634 | -0.184039 | 0.041479 | -0.025397
83 | BRSK1 | -0.006336 | -0.009841 | -0.01027 | 0.002541 | -0.009779 | -0.627672 | -0.467949 | -0.276576 | 0.065924 | -0.179032 | -0.030003
84 | CDYL2 | -0.002971 | -0.000403 | -0.003289 | -0.000553 | 0.01825 | -0.450974 | -0.02936 | -0.135721 | -0.021984 | 0.512013 | -0.060724
85 | AIPL1 | -0.002895 | -0.001591 | -0.001234 | 0.001036 | 0.006962 | -0.582895 | -0.153731 | -0.067542 | 0.054605 | 0.259087 | -0.03874
86 | TRPV4 | -0.001993 | 0.002388 | 0.00305 | -0.00634 | -0.000189 | -0.286459 | 0.164727 | 0.119164 | -0.238618 | -0.005028 | -0.041587