Spreadsheet: 17d89845-b37b-4b04-a91b-a02f70003b76
Sheet: Sheet1

List of primers for esiRNA preparation for validated hits that decreased the frequency of HR-DSBR | Unnamed: 1 | Unnamed: 2 | Unnamed: 3 | Unnamed: 4 | Unnamed: 5 | Unnamed: 6
No. | [NAME] | Ensembl ID | Forward Primer [NAME] (5'-3') [NAME] | Reverse Primer [NAME] (5'-3') [NAME] | Forward Primer [NAME] (5'-3') esiRNA2 | Reverse Primer [NAME] (5'-3') esiRNA2
1 | ACTB | ENSG00000075624 | CAAATGCTTCTAGGCGGACT | AGAGAAGTGGGGTGGCTTTT | TGACCCAGATCATGTTTGAGA | CCATCTCTTGCTCGAAGTCC
2 | AIP | ENSG00000110711 | GCCATGACAGACGAAGAGAAG | GCTTGAAGTAGGCCTTGACG | GAAGCTACCGAGCGAGTCC | CAGAGGAACTGGGCAATCTC
3 | ALOX15 | ENSG00000161905 | CTGCGATACACCCTGGAAAT | GGTGACAAAGTGGCAAACCT | TGGTTCTGCAACTGGATCTCT | CCTTCCAGCAAGTCAGAACA
4 | [NAME] | ENSG00000095139 | TTGTGGAAATGACCCGAACT | TGCTTTACGACGCATCTCAG | GGAGCCAAAGGAAAGGAAGT | [NAME]
5 | ARHGEF1 | ENSG00000076928 | ACGTCGCCTTTGAACTTGAC | ACGGCAGCACTCTTTTCTTC | TGTACATGCGCCACCTTG | AGGGTGCAGAGAGACTCCAG
6 | [NAME] | ENSG00000187244 | GGGGAAGGTGCTTTCCTTAC | ACTTCGTCTCCTTCCCTCCA | GAGGTGATGCGAGGAAAGTC | GGCTTTGCAAACACGTTGAG
7 | BRCA1 | ENSG00000012048 | CTTCCCTGCTTCCAACACTT | CAACTCCCTGGCTTTCAGAC | GGTACTGATTATGGCACTCAGGA | CCAGAGTGGGCAGAGAATGT
8 | C1orf63 | ENSG00000117616 | GTAGCAGGTCGCGCTCTC | CACCTATTCCACGGCTTGTT | [NAME] | GCGAGTATGACCGCGAGTAG
9 | CHCHD2 | ENSG00000106153 | CATTACTGGGGGCTTCAGTG | TGCCCAGTCCCAGATTCTAC | [NAME] | CATCTGGGCCATCAGACC
10 | CKAP5 | ENSG00000175216 | CAAGGAGCTGGGCATAGAGA | AGCATCTCCACCAGCAGACT | CGATGTGAAATGCCAGAACTT | AGCGAAATCATGTTGCCAAT
11 | CWC22 | ENSG00000163510 | CGGTTTGCCATCAACTTCTT | TGGTCTCTGTCATTCGCAAC | TTAAGGAATGTGGCCTCAAA | CCTGGTCTGTGTTCGAGTCA
12 | DDB1 | ENSG00000167986 | AATGGAATTGGAATCCACGA | CTGAGGCTCCTTCCATTCAC | AAGCAAAGCACGATTGTGTG | AAAGGTTTCCATGGCCACTA
13 | DRG2 | ENSG00000108591 | GCTGCTACCATGGGGATCT | ACCCCAGGAATACACGTCAG | CTTCAAGCCCAAGAAAGGTG | CCAGCAGATAGTCCAGGTTCA
14 | E2F1 | ENSG00000101412 | AGGGTTTCCAGAGATGCTCA | CATGGACTCATGCACACACA | CCTTCGTAGCATTGCAGACC | GTTCTTGCTCCAGGCTGAGT
15 | ETFB | ENSG00000105379 | GGCCATCGATGATGACTGTA | GGTCCTCCACACTGATCACA | CGTGCTCGTAGCTGTCAAGA | TCCACCTTCTCCTTCTCTGC
16 | [NAME] | ENSG00000184731 | GCTCACAGTCGGACCTCAG | TGTACAGCCACTTGATGATGC | CAGGAGCGCAGTGGAGAG | GGCGCCTTGTCCTTACCC
17 | FIZ1 | ENSG00000179943 | CCGCCCCAAACACTAGAATA | CCTAGGGATTGGGAGGAAGA | CCACAAACAAACAGGGTCCTT | GTGGCATTTGGAGGGATCTA
18 | GAK | ENSG00000178950 | CAGCTCCTGGCAGACAAGT | CTTGAGTGGGTCCGTGTCTT | CACAGCTCCACAGGTTGG | TTACAAAGTGCGGTGCAAAC
19 | HNRPA0 | ENSG00000177733 | [NAME] | ATCGGATGGAACTTGACCAC | GGTGGTCGAGACCAGAACG | CATAGCCGCCTCTGTAAGGT
20 | HNRPK | ENSG00000165119 | GACCCAGAACGCTTCAGTTC | TCCACAGCATCAGATTCGAG | ACCTAGAGGGGGAGACCTCA | CCGATCTTCGGATCCTTCTA
21 | IGLON5 | ENSG00000142549 | GGGGAGTATGAGTGCGTGAC | CGACACGTATAGTTGCCGTAA | CTCCTGCCGACAACTACACA | CGACGAGATGTTCACAATGC
22 | KIAA0415 | ENSG00000164917 | AGGACCCGTCCTTCCTGTA | CCAGGCCAGGAACTTAAAGA | GCGGTAGCCACAGACTTCTT | AGCTTTCTGCAGGTCGGAGT
23 | MKNK2 | ENSG00000099875 | CAGGAGTACGCCGTCAAGAT | CCGGCTTTAGGTCCCTGT | CCGTGAAGATCTGTGACTTCG | CCTCCTGGATGCTCTCAAAC
24 | NTHL1 | ENSG00000065057 | CAGCAACAGCTGGTCAACAT | GCTGGTCTGCTTGATGTATTTC | CACTGTGTCAGGCATTGCAG | TCCTGAAGCGTAAAGCCACT
25 | OSBPL5 | ENSG00000021762 | CACAGCCAAGTCCAGGTTTT | TTGATAAACACGTCCCTGTCC | AGTCTGATGTGGACCCTGCT | TAGAATGTGCGGCTGTCAGT
26 | PRPF40B | ENSG00000110844 | TATCCAGGCCCTAAAGAGCA | [NAME] | CGAGGGCCCTATGGAGTG | GCTGTGGCTGAAGTGTCTGT
27 | PSMD1 | ENSG00000173692 | GCAACATACCTTCCCAAGGA | GAGCATCAGCCTCTTCCATC | CATTGCTCTGGAGACACGAA | GCCATCAGGAGGTTGTCTTC
28 | PSMD14 | ENSG00000115233 | ATGGGTTTGATGCTTGGAGA | ATGCCTGGATAGATGGCTTG | GAGATGTTGGAATTAGCCAAGAA | TTGCACAACTGAGACTGAAGG
29 | PSMD4 | ENSG00000159352 | GAAGGTGGCAAGATGGTGTT | TCTTGAGGCGTTTAGCCAGT | GGGCTTCCTGACCTAAGCA | CATGCAGTCCCCTAAGCAGA
30 | RAD51 | ENSG00000051180 | GCATAAATGCCAACGATGTG | CATCACTGCCAGAGAGACCA | CTCGAGCGTTCAACACAGAC | TGCTCCATCCACTTGAGCTA
31 | RBBP8 | ENSG00000101773 | ACCCCCATGTCCGATACATA | GCTCCAAATACAGGAGATGACA | AGCTGAGGGAACAGCAGAAA | TCAAGCTCAGCTGCTTGATG
32 | RBM42 | ENSG00000126254 | AGAAGAAGGGGAAGCCAGAG | ATGCTCTTGCGAAGCTTGAT | GGGCCTGAAAGAGAAGGAAG | GTCTTCACCCAGGGGCTCT
33 | RECQL4 | ENSG00000160957 | CTAGGGCTGGGAAGGCTGA | CAGGTTGTGGTGAAGGAACC | TGTCACAGTGAGGTCCCAGA | GGGTCTTCCTCAACTGCTACA
34 | SEMA7A | ENSG00000138623 | CGGAAGCAGGAATACAATGG | GTGGCAGCATCACTGCATAC | TGTGTGTATTCCCTCGGTGA | CTTGTGGATAGTGCCCCTGT
35 | SERPINH1 | ENSG00000149257 | AGCTTCGCTGATGACTTCGT | TTTCCTTCTCGTCGTCGTAGT | AAGGCTCCTGAGACACATGG | GCTCAATTTGGTCTCACAGGT
36 | SHFM1 | ENSG00000127922 | GAGGAAGAGTGAGGGTTCCA | TAGTGTCCCATCCTGGGTTC | n.a. | n.a.
37 | SNRNP200 | ENSG00000144028 | GGAGGAAAGAAGAGCCAAGC | CCTCCCCGTATACGTCTTCA | GGCAGCTCAGTCGTTTCTATG | TGGGTCAGCTTCCATCTTTC
38 | THOC4 | ENSG00000183684 | CACGATCTTTTCGACAGTGG | TCATGCCACCTCTGTTTACG | GCAGGAATTCAAAGCAGCAG | CTTCTCCACAACAGCAACCA
39 | TPX2 | ENSG00000088325 | CCCACCAAAGAAGATGAGGA | CAAAGGGCTCCTGAGAGATG | GGCAAATCCAATACGCAAGT | CGGCTGATGGTTTAAAGGAA
40 | TRMT2A | ENSG00000099899 | GGACTAGCCAAGGCTGTGAG | CTTGGTTGATGCCCTCTCTG | [NAME] | CTGGGTCGTATGCCGAGTAT
41 | TSKU | ENSG00000182704 | CCCTTTCTTTGCCATGAGG | CTGCTGCTGCTACTCCTGTG | TCTGGAAGCTTAGGGCACAT | TCGGAAGCTGAGATGCTACC
42 | VPRBP | ENSG00000145041 | AACCCAGATCTTGCCAACAA | CGTTTCACATCAATGGTTGC | CCCACCTACGCTGGACAGTA | ACAGCAGGTGAAGCCACTCT
43 | XPC | [NAME] | AGAGTGCTGCCTCGAGATGT | CTGGATCCGCAGTCAATCTT | GCCGAGACCTTGAGACCATA | TCCGAGCACGGTTAGAAAAG
44 | ZMYND15 | ENSG00000141497 | GTCCCAAGGCTAGGTGTGAA | CAGGAAGGCCTCTTTGTTGA | GCAGATCAAGGTGTCAGCAA | GGCTTGTAAACCAGGTGGAA
45 | ZYG11BL | ENSG00000160445 | TCAGAAGAAGCTGCTGGACA | GCAGGCATTGTAGGAAACCT | CGTGAGGAGGTGGAGGAAC | ACTGCAGTGCTCAATCACCTT
List of primers for esiRNA preparation for validated hits that decreased the frequency of HR-DSBR
No. | [NAME] | Ensembl ID | Forward Primer [NAME] (5'-3') [NAME] | Reverse Primer [NAME] (5'-3') [NAME] | Forward Primer [NAME] (5'-3') esiRNA2 | Reverse Primer [NAME] (5'-3') esiRNA2
1 | ATXN3 | ENSG00000066427 | CCTGTGTGATTACAGCATAGGG | TTTCCTGAAAGGTTAATTTGGTT | CAAATTAACCTTTCAGGAAAGTATCTC | CAGAGTTTAGGAACGCACCA
2 | C6 | ENSG00000039537 | CTCTGCTTTGTACAGCCGAAT | TCACTCCTTCCACCTCGAAT | AAGCCAGTTGTGCAGGAAGT | TCGTTGGAGTCTGTGTCAAA
3 | CNGA1 | ENSG00000198515 | CAAGGACTGCTGGTAAAGGAA | CCCATGTATCATTTCCAAATCC | CCCGTGAGGGATTCTGAGTA | ACGTTGATGGCAATTTCTGC
4 | CREBBP | ENSG00000005339 | CACACGTACACACCCACACA | TTTGTCTGTTGCACACAGTTTATTT | CAACAGCAGGTGCTGAACAT | CAGCTGCCTCCGTAACATTT
5 | DNAJB4 | ENSG00000162616 | GCCTCAAACAAGATCCTCCA | ATGGCAGCCCATATCCAATA | GACCAACGTGGTGACCTTCT | TGCCTATTTATTTGACCCGTCT
6 | C5orf28 | ENSG00000151881 | GTGATTCCCGTTGTGGTTCT | GCCGTGTACCTCAGACATCA | TGGATCCAATTTTCCTGAGA | CTGGATATTATAATGATGTGTCACAAG
7 | [NAME] | ENSG00000174405 | TCAGAGTTCAGCACTTGAGCA | GCCATCATCTCACCATCAAG | GCAGCCTCGCTTTATGATTC | ACATGAGACACTCCCTCAGC
8 | [NAME] | ENSG00000186687 | TGCCAGAGCATTAGAAGCAG | AAAGCACCACATTCTCAAATAGC | AGTCACCTAGGGTCACTATGGAA | TGGTAGAATGCCAGGACCTT
9 | MMRN1 | ENSG00000138722 | CAGAGTTTGATGATGCTGCAA | AGTGATGCTCCCTGCTCAAG | TTTGCAAATACTGCCAACCA | CCAGTGCCTCCAACTGTGTT
10 | PDHX | ENSG00000110435 | CCGACTTGCCTAGTCCTCAA | GCTCAAATGAGCCAAACATATAC | CAACTCCTGGACAACCCAAT | TATCTGTTGCCACAGCCACT
11 | SLC39A12 | ENSG00000148482 | AACGGAATGCAAGGAGATTG | CACCCTGGAGGGACAAAGTA | CCCACATGAAATGGGAGACT | TGCAGGAGAAACATCATCCA
12 | [NAME] | ENSG00000101596 | TTGAAGTCCTGCCTAATCAACC | TACTTTCTGCCAGCACCAGA | [NAME] | [NAME]
13 | SMS | ENSG00000102172 | AAAGGAGACTGCTATCAGGTTCTAA | AAGGGACACAGACGATCTCC | CCCTTCATACTTGGAATTGTGG | GGGGTCAGTGCATTTAGCAG
14 | STAG2 | ENSG00000101972 | TGACTGAAGAATTCGATGAGGA | TTCCGTTCTGCTTCATATTGTC | GCACTCTGTAATGAAGAGTTCACAA | GCAAGTTGCCAAAGGATTACA
15 | USP12 | ENSG00000152484 | CCAACGTGGGTTCATGAGAT | CCACAGTGAACCACAACAGC | TGGGAATACCTGCTACTGCAA | GAATTCATGGGCATCTTGTTG
16 | WRB | ENSG00000182093 | GATGGACGAGTTTGCCAGAT | GAACGGATGAAGCACAATAGC | TCACGATTTTCTACACCTGTCA | CCATATTGAATGTGATTAAAGAAGAAA
17 | XRCC2 | ENSG00000196584 | CCAAATCTGTTTGCTGATGAA | AAAGTGTAAGAAGTAAGTGGGTGCT | TTACTGGATAGACCGCGTCA | GAAAATTGGTTGCTGCTTTGA
n.a. not available