Spreadsheet: 3f9f3607-567e-4e8d-af37-f724dfa4b306
Sheet: Dataset S2

Dataset S2. Properties of genomic sequences
 |  |  |  |  | Biological information |  |  |  |  |  | NGS information |  |  |  |  |  |  | Genomic Information |  |  | Accession
Alternate ID | Strain | Resequenced | Node | Cluster | Year | Host | Country/Area | Country Code | PFGE Profile |  | No. Of Scaffolds | N50 | Total Length | Read Length | No. of Reads | Depth |  | No. of Genes | No. of Substitutions | No. of indels | Reads | Project | Assemblies
01.O.05 | MC_05-0582 | nO | N20 | A1 | 2005 | Human (blood) | Ireland | IE | AgoX3 |  | 161 | 149186 | 4813373 | 74 | 5865852 | 91.3992952551153 |  | 4776 | 56 | 3 | ERS180311 | PRJEB1064 | CATQ01000001-161
02.O.05 | MC_05-0632 | nO | N20 | A1 | 2005 | Human (feces) | Ireland | IE | AgoX3 |  | 174 | 149625 | 4952200 | 34 | 26403264 | 186.6068090949477 |  | 4906 | 56 | 3 | [NAME] | PRJEB1065 | CATP01000001-174
03.O.05 | MC_05-0601 | nO | N20 | A1 | 2005 | Human (feces) | Ireland | IE | AgoX3 |  | 183 | 125951 | 4903091 | 74 | 11352646 | 173.6554451059546 |  | 4863 | 56 | 3 | ERS180313 | PRJEB1066 | CATO01000001-183
04.O.05 | MC_05-0750 | nO | N21 | A1 | 2005 | Human (feces) | Ireland | IE | AgoX3 |  | 178 | 122679 | 4807154 | 74 | 7493386 | 116.909911769001 |  | 4776 | 58 | 4 | ERS180314 | PRJEB1067 | CATN01000001-178
05.O.06 | MC_06-0567 |  | N21 | A1 | 2006 | Human (feces) | Ireland | IE | AgoX3 |  | 198 | 96577 | 4809082 | 74 | 9586444 | 149.9113021568963 |  | 4776 | 63 | 4 | ERS180315 | PRJEB1068 | CATM01000001-198
06.O.05 | MC_05-0602 | nO | N20 | A1 | 2005 | Human (feces) | Ireland | IE | AgoX3 |  | 176 | 126117 | 4912684 | 74 | 5147246 | 78.58096510990734 |  | 4863 | 57 | 3 | [NAME] | PRJEB1069 | CATL01000001-176
07.O.05 | MC_05-0587 | nO | N20 | A1 | 2005 | Human (feces) | Ireland | IE | AgoX3 |  | 173 | 134666 | 4907104 | 74 | 9250482 | 141.3840322112594 |  | 4863 | 59 | 3 | ERS180317 | PRJEB1070 | CATK01000001-173
08.A.05 | MC_05-0784 | nO | N19 | A2 | 2005 | Animal (cattle) | Ireland | IE | SAGOXB.0066 |  | 158 | 182807 | 4808520 | 74 | 8777616 | 136.9072396496219 |  | 4787 | 55 | 3 | ERS180318 | PRJEB1071 | CATJ01000001-158
09.F.08 | MC_08-0766 | nO | N19 | A2 | 2008 | Food (poultry) | Ireland | IE | SAGOXB.0066 |  | 144 | 185586 | 4718472 | 74 | 8038086 | 127.765185424434 |  | 4703 | 54 | 3 | ERS180319 | PRJEB1072 | CATF01000001-144
10.A.05 | MC_05-0595 | nO | N22 | A2 | 2005 | Animal (poultry) | Ireland | IE | SAGOXB.0066 |  | 158 | 182851 | 4711344 | 74 | 6964228 | 110.8637153219973 |  | 4700 | 55 | 3 | ERS180320 | PRJEB1073 | CATR01000001-158
11.A.05 | MC_05-0634 | nO | N22 | A2 | 2005 | Animal (poultry) | Ireland | IE | SAGOXB.0066 |  | 144 | 183380 | 4734406 | 74 | 5535886 | 87.69662973559936 |  | 4700 | 55 | 3 | ERS180321 | PRJEB1074 | CATE01000001-144
12.A.06 | MC_06-0623 | nO | N19 | A2 | 2006 | Animal (poultry) | Ireland | IE | SAGOXB.0066 |  | 145 | 183560 | 4715039 | 74 | 5998108 | 95.40920022082533 |  | 4700 | 55 | 3 | ERS180322 | PRJEB1075 | CATD01000001-145
13.E.05 | MC_05-0677 | nO | N23 | A2 | 2005 | Environment (turkey dust) | Ireland | IE | AgoX50 |  | 153 | 185557 | 4753411 | 74 | 16620070 | 262.2338463894664 |  | 4754 | 55 | 3 | ERS180323 | PRJEB1076 | CATC01000001-153
14.E.05 | MC_05-0828 | nO | N23 | A2 | 2005 | Environment (poultry dust) | Ireland | IE | AgoX50 |  | 146 | 183418 | 4753553 | 74 | 12258804 | 193.4153884473361 |  | 4754 | 53 | 3 | ERS180324 | PRJEB1077 | CATB01000001-146
15.H.03 | 0309W51997 | NO | N24 | NA | 2003 | Human | Denmark | DK | AgoX81 |  | 158 | 155024 | 4772943 | 74 | 7984596 | 125.4665517690029 |  | 4722 | 62 | 4 | ERS180325 | PRJEB1078 | CATA01000001-158
16.H.08 | DBS_20080506 |  | N24 | NA | 2008 | Human (feces) | Scotland | Sco | AgoX59 |  | 146 | 145389 | 4769162 | 74 | 3864206 | 60.76863188962757 |  | 4746 | 67 | 4 | ERS180326 | PRJEB1079 | CATY01000001-146
17.H.06 | DBS_20061833 | nO | N17 | NA | 2006 | Human | Scotland | Sco | SAGOXB.0022 |  | 151 | 149175 | 4809698 | 74 | 5476798 | 85.40242027669929 |  | 4799 | 53 | 7 | ERS180327 | PRJEB1080 | CASY01000001-151
18.H.07 | [NAME] | NO | N17 | NA | 2007 | Human | Denmark | DK | SAGOXB.0005 |  | 149 | 183733 | 4799081 | 74 | 4272326 | 66.76787701645378 |  | 4761 | 51 | 5 | [NAME] | PRJEB1081 | CASX01000001-149
19.F.03 | WR-03-08915 | nO | N17 | NA | 2003 | Food (fennel) | Germany | DE | SAGOXB.0002b |  | 156 | 122958 | 4754043 | 74 | 6463506 | 101.9990973399935 |  | 4696 | 50 | 3 | ERS180329 | PRJEB1082 | CASW01000001-156
20.H.06 | DBS_20060793 |  | N16 | NA | 2006 | Human (feces) | Scotland | Sco | AgoX31 |  | 212 | 192420 | 4868524 | 74 | 4192988 | 64.59331411327129 |  | 4815 | 73 | 8 | ERS180330 | PRJEB1083 | CASV01000001-212
21.H.10 | WR-10-02783 | nO | N16 | NA | 2010 | Human (feces) | Germany | DE | AgoX75 |  | 165 | 123073 | 4907759 | 74 | 8645644 | 132.1220744539412 |  | 4875 | 58 | 5 | ERS180331 | PRJEB1084 | CASU01000001-165
22.H.04 | DBS_20042479 |  | N25 | NA | 2004 | Human (feces) | Scotland | Sco | SAGOXB.0024b |  | 173 | 149145 | 4797402 | 74 | 6695034 | 104.6665570239892 |  | 4777 | 55 | 3 | ERS180332 | PRJEB1085 | CAST01000001-173
23.F.01 | WR-01-11238 | nO | N25 | NA | 2001 | Food (curry) | Germany | DE | AgoX80 |  | 171 | 132913 | 4848722 | 74 | 7281298 | 112.6270695659599 |  | 4846 | 69 | 4 | ERS180333 | PRJEB1086 | CASS01000001-171
24.H.04 | CS_NB04.055 | NO | N25 | NA | 2004 | Human | Taiwan | TW | AgoX78 |  | 149 | 163155 | 4843279 | 74 | 5729442 | 88.72256791318443 |  | 4822 | 75 | 5 | ERS180334 | PRJEB1087 | CASR01000001-149
25.H.03 | SL483 |  | N27 | B1 | 2003 | Human | USA | US | / |  | 2 | 4798660 | 4836638 | / | / | / |  | 4798 | 67 | 6 | / | / | CP001137-8
26.F.98 | SF_H6476 | nO | N27 | B1 | 1998 | Food (toasted oats cereal) | USA | US | SAGOXB.0024a |  | 154 | 118687 | 4819541 | 34 | 17433140 | 126.6012468822238 |  | 4746 | 66 | 4 | ERS180335 | PRJEB1088 | CATX01000001-154
27.O.98 | SF_H6637 | nO | N27 | B1 | 1998 | Human | USA | US | SAGOXB.0024a |  | 183 | 120216 | 4756257 | 74 | 7684392 | 121.1728886811625 |  | 4746 | 66 | 4 | ERS180336 | PRJEB1089 | CASQ01000001-183
28.O.08 | SF_08-0333 | nO | N28 | B2 | 2008 | Unknown | USA | US | SAGOXB.0024a |  | 180 | 122821 | 4756591 | 74 | 7373804 | 116.2671543548731 |  | 4746 | 66 | 3 | ERS180337 | PRJEB1090 | CASP01000001-180
29.O.08 | SF_08-0443 | nO | N28 | B2 | 2008 | Unknown | USA | US | SAGOXB.0024a |  | 224 | 70173 | 4771176 | 74 | 3167950 | 49.7982572849964 |  | 4746 | 67 | 3 | ERS180338 | PRJEB1091 | CASO01000001-224
30.H.04 | MC_04-0873 | nO | N29 | NA | 2004 | Human (feces) | Ireland | IE | SAGOXB.0024b |  | 160 | 155088 | 4872238 | 74 | 6179348 | 95.12078432950115 |  | 4863 | 50 | 4 | [NAME] | PRJEB1092 | CATW01000001-160
31.H.09 | DBS_20090595 | nO | N30 | NA | 2009 | Human (feces) | Scotland | Sco | SAGOXB.0002 |  | 141 | 182855 | 4710985 | 74 | 10394968 | 165.4903592348521 |  | 4678 | 72 | 5 | ERS180340 | PRJEB1093 | CASN01000001-141
32.A.00 | WR-00-06755 | nO | N34 | NA | 2000 | Animal (camel) | United Arab Emirates | AE | SAGOXB.0002a |  | 248 | 79097 | 4860811 | 74 | 7369546 | 113.7085869004164 |  | 4793 | 60 | 7 | ERS180341 | PRJEB1094 | CASM01000001-248
33.A.05 | WR-05-02138 | nO | N34 | NA | 2005 | Animal (gyrfalcon) | United Arab Emirates | AE | SAGOXB.0002a |  | 154 | 149230 | 4751203 | 74 | 9487624 | 149.7666590966541 |  | 4691 | 59 | 6 | ERS180342 | PRJEB1095 | CASL01000001-154
34.H.09 | [NAME] | nO | N33 | NA | 2009 | Human (urine) | Scotland | Sco | AgoX51 |  | 153 | 148941 | 4782513 | 74 | 10322190 | 161.8739457686785 |  | 4719 | 74 | 4 | ERS180343 | PRJEB1096 | CASK01000001-153
35.H.08 | CS_CC08.043 | NO | N31 | NA | 2008 | Human | Taiwan | TW | AgoX82 |  | 132 | 183752 | 4772249 | 74 | 3131690 | 49.2172034610935 |  | 4742 | 77 | 7 | ERS180344 | PRJEB1097 | CASJ01000001-132
36.H.00 | [NAME] | nO | N31 | NA | 2000 | Human (feces) | Scotland | Sco | SAGOXB.0020 |  | 150 | 183349 | 4793315 | 74 | 6083060 | 95.18037099585568 |  | 4824 | 72 | 8 | [NAME] | PRJEB1098 | CASI01000001-150
37.F.02 | WR-02-00958 | nO | N32 | C | 2002 | Food (aniseed) | Germany | DE | SAGOXB.0010 |  | 151 | 150618 | 4764544 | 74 | 9231726 | 145.3191428182844 |  | 4736 | 55 | 7 | ERS180346 | PRJEB1099 | CASH01000001-151
38.O.03 | WR-03-01399 | nO | N32 | C | 2003 | Human (feces) | Germany | DE | SAGOXB.0010 |  | 171 | 93178 | 4806787 | 74 | 3724146 | 58.10761949718179 |  | 4736 | 54 | 7 | ERS180347 | PRJEB1100 | CASG01000001-171
39.O.03 | WR-03-03389 | nO | N32 | C | 2003 | Human (feces) | Germany | DE | AgoX91 |  | 141 | 131208 | 4831083 | 34 | 15649406 | 113.3760711625116 |  | 4620 | 68 | 7 | ERS180348 | PRJEB1101 | CATV01000001-141
40.E.08 | MC_08-0770 | nO | N06 | NA | 2008 | Envirnoment (water) | Ireland | IE | AgoX65 |  | 123 | 289507 | 4815535 | 74 | 7892838 | 122.9277432310221 |  | 4830 | 62 | 3 | ERS180349 | PRJEB1103 | CASE01000001-123
41.E.09 | SF_R0474-09 | nO | N15 | D1 | 2009 | Environment (waste water) | Ireland | IE | AgoX67 |  | 303 | 46272 | 4784066 | 74 | 4176308 | 65.47215276712319 |  | 4748 | 75 | 6 | ERS180350 | PRJEB1102 | CASF01000001-303
42.E.09 | SF_R0517-09 | nO | N15 | D1 | 2009 | Environment (waste water) | Ireland | IE | AgoX67 |  | 298 | 47615 | 4775170 | 74 | 4335938 | 67.65587756357965 |  | 4748 | 74 | 5 | ERS180351 | PRJEB1104 | CASD01000001-298
43.E.09 | SF_R0102-09 | nO | [NAME] | D1 | 2009 | Environment (waste water) | Ireland | IE | AgoX67 |  | 145 | 185562 | 4745097 | 74 | 10381982 | 164.0954125911441 |  | 4748 | 71 | 5 | ERS180352 | PRJEB1105 | CASC01000001-145
44.E.09 | SF_R0041-09 |  | [NAME] | D1 | 2009 | Environment (waste water) | Ireland | IE | AgoX67 |  | 326 | 46103 | 4778096 | 74 | 3827562 | 60.07982049753709 |  | 4748 | 70 | 5 | ERS180353 | PRJEB1106 | CASB01000001-326
45.E.09 | SF_R0037-09 | nO | [NAME] | D1 | 2009 | Environment (waste water) | Ireland | IE | AgoX67 |  | 229 | 75187 | 4770469 | 74 | 7576788 | 119.1201745572605 |  | 4748 | 70 | 5 | ERS180354 | PRJEB1107 | CASA01000001-229
46.E.09 | SF_R0038-09 | nO | [NAME] | D1 | 2009 | Environment (waste water) | Ireland | IE | AgoX67 |  | 221 | 82800 | 4769257 | 74 | 9533786 | 149.9256487960284 |  | 4748 | 70 | 5 | ERS180355 | PRJEB1108 | CARZ01000001-221
47.E.09 | SF_R0040-09 | nO | N13 | D1 | 2009 | Environment (waste water) | Ireland | IE | AgoX67 |  | 278 | 48655 | 4804319 | 74 | 6508664 | 101.6064503626841 |  | 4748 | 69 | 5 | ERS180356 | PRJEB1109 | CAAD01000001-278
48.E.08 | MC_08-0771 | nO | N13 | D1 | 2008 | Envirnoment | Ireland | IE | AgoX67 |  | 148 | 183480 | 4746901 | 74 | 8093654 | 127.8779671200221 |  | 4748 | 71 | 5 | ERS180357 | PRJEB1110 | CARY01000001-148
49.E.09 | SF_R0571-09 | nO | N13 | D1 | 2009 | Environment (waste water) | Ireland | IE | AgoX67 |  | 152 | 190430 | 4748346 | 74 | 3665812 | 57.90140398361871 |  | 4748 | 69 | 5 | ERS180358 | PRJEB1111 | CATU01000001-152
50.E.08 | MC_08-0968 |  | N12 | D1 | 2008 | Environment (waste water) | Ireland | IE | AgoX67 |  | 155 | 125608 | 4845220 | 34 | 23328796 | 168.0701248091347 |  | 4748 | 71 | 5 | ERS180359 | PRJEB1112 | CARX01000001-155
51.E.09 | SF_R0039-09 | nO | N12 | D1 | 2009 | Environment (waste water) | Ireland | IE | AgoX67 |  | 222 | 82219 | 4772656 | 74 | 7959556 | 125.0806050132253 |  | 4748 | 71 | 5 | ERS180360 | PRJEB1113 | CARW01000001-222
52.F.08 | MC_08-0466 | nO | N11 | D2 | 2008 | Food (pork) | Ireland | IE | SAGOXB.0066 |  | 142 | 184145 | 4713502 | 74 | 9659316 | 153.6964872402727 |  | 4700 | 70 | 5 | ERS180361 | PRJEB1114 | CARV01000001-142
53.F.08 | MC_08-0742 | nO | N11 | D2 | 2008 | Food (pork) | Ireland | IE | SAGOXB.0066 |  | 141 | 182623 | 4712780 | 74 | 10318590 | 164.2118346283934 |  | 4700 | 70 | 5 | ERS180362 | PRJEB1115 | CARU01000001-141
54.O.08 | MC_08-0610 | nO | N10 | D2 | 2008 | Human (feces) | Ireland | IE | SAGOXB.0066 |  | 146 | 185578 | 4711670 | 74 | 11598716 | 184.6274675433551 |  | 4700 | 70 | 5 | ERS180363 | PRJEB1116 | CART01000001-146
55.U.08 | SF_080024249 | nO | N10 | D2 | 2008 | Unknown | Ireland | IE | SAGOXB.0066 |  | 138 | 183470 | 4710474 | 74 | 7108110 | 113.1750753745801 |  | 4700 | 71 | 5 | ERS180364 | PRJEB1117 | CARS01000001-138
56.O.08 | MC_08-1117 | nO | N10 | D2 | 2008 | Human (feces) | Ireland | IE | SAGOXB.0066 |  | 139 | 183108 | 4709187 | 74 | 13017624 | 207.3227926603892 |  | 4700 | 70 | 5 | ERS180365 | PRJEB1118 | CARR01000001-139
57.A.08 | MC_08-0532 | nO | N10 | D2 | 2008 | Animal (Swine) | Ireland | IE | SAGOXB.0066 |  | 166 | 185580 | 4707261 | 74 | 16674248 | 265.6679967395052 |  | 4700 | 73 | 5 | ERS180366 | PRJEB1119 | CATT01000001-166
58.E.08 | [NAME] | nO | N10 | D2 | 2008 | Environment (water) | Scotland | Sco | SAGOXB.0066 |  | 137 | 185588 | 4712562 | 74 | 9626834 | 153.2101964918446 |  | 4700 | 71 | 5 | [NAME] | PRJEB1120 | CARQ01000001-137
59.F.08 | MC_08-0531 | nO | N10 | D2 | 2008 | Food (pepperoni) | Ireland | IE | SAGOXB.0066 |  | 134 | 182737 | 4710013 | 74 | 13908376 | 221.4703441370544 |  | 4700 | 70 | 5 | ERS180368 | PRJEB1121 | CARP01000001-134
60.O.08 | DBS_20080895 |  | N10 | D2 | 2008 | Human (feces) | Scotland | Sco | SAGOXB.0066 |  | 152 | 146310 | 4745412 | 74 | 2634238 | 41.63344510445036 |  | 4700 | 70 | 5 | ERS180369 | PRJEB1122 | CARO01000001-152
61.O.08 | DBS_20080935 |  | N10 | D2 | 2008 | Human (feces) | Scotland | Sco | SAGOXB.0066 |  | 160 | 121425 | 4762069 | 74 | 2290092 | 36.06770502485369 |  | 4700 | 74 | 6 | ERS180370 | PRJEB1123 | CARN01000001-160
62.H.72 | WS0301 |  | N05 | NA | 1972 | Human | England | Eng | AgoX79 |  | 195 | 112451 | 4734747 | 101 | 37170536 | 800.7597178898893 |  | 4712 | 45 | 6 | ERS180371 | PRJEB1124 | CARM01000001-195
63.H.87 | WS1035 |  | N05 | NA | 1987 | Human | Austria | AT | [NAME] |  | 265 | 105951 | 4841491 | 101 | 52758324 | 1111.506568534363 |  | 4832 | 53 | 3 | ERS180372 | PRJEB1125 | CARL01000001-265
64.H.00 | DBS_20001356 | nO | N05 | NA | 2000 | Human (feces) | Scotland | Sco | AgoX83 |  | 169 | 156089 | 4772491 | 74 | 8883458 | 139.6041082109951 |  | 4734 | 64 | 5 | ERS180373 | PRJEB1126 | CARK01000001-169
65.H.72 | WS1033 |  | N05 | NA | 1972 | Human | England | Eng | SAGOXB.0024c |  | 206 | 185406 | 4829196 | 101 | 30455804 | 643.2731262098287 |  | 4789 | 42 | 4 | ERS180374 | PRJEB1127 | CARJ01000001-206
66.F.99 | WR-99-00348 | nO | N35 | NA | 1999 | Food | Germany | DE | AgoX77 |  | 169 | 99569 | 4666402 | 74 | 7717440 | 124.0373204023143 |  | 4771 | 51 | 2 | ERS180375 | PRJEB1128 | CARI01000001-169
67.H.09 | MC_09-0426 | nO | N36 | NA | 2009 | Human (feces) | Ireland | IE | AgoX64 |  | 167 | 183274 | 4803330 | 74 | 9563312 | 149.3231570597898 |  | 4771 | 78 | 6 | ERS180376 | PRJEB1129 | CATS01000001-167
68.U.05 | DBS_20052893 |  | N37 | NA | 2005 | Unknown | Scotland | Sco | SAGOXB.0009 |  | 136 | 145559 | 4780977 | 74 | 5535944 | 86.84329583681327 |  | 4740 | 56 | 8 | ERS180377 | PRJEB1130 | CARG01000001-136
69.H.06 | DBS_20062828 |  | N37 | NA | 2006 | Human (feces) | Scotland | Sco | SAGOXB.0070 |  | 181 | 83674 | 4854757 | 74 | 2542606 | 39.28012256844163 |  | 4828 | 75 | 6 | ERS180378 | PRJEB1131 | CARF01000001-181
70.E.05 | MC_05-0811 | nO | N03 | NA | 2005 | Environemnt | Ireland | IE | AgoX63 |  | 155 | 154424 | 4819182 | 74 | 5746042 | 89.42454341836437 |  | 4791 | 60 | 5 | ERS180379 | PRJEB1132 | CARE01000001-155
71.E.05 | MC_05-0209 | nO | N38 | E | 2005 | Environment | Ireland | IE | [NAME] |  | 154 | 155580 | 4728551 | 74 | 5227518 | 82.91416334517699 |  | 4696 | 39 | 2 | ERS180380 | PRJEB1133 | CARD01000001-154
72.A.52 | WS0243 |  | N38 | E | 1952 | Animal (cattle) | Ghana | GH | AgoX90 |  | 203 | 121863 | 4703884 | 101 | 67532814 | 1464.395599041133 |  | 4688 | 42 | 2 | ERS180381 | PRJEB1134 | CARC01000001-203
73.H.09 | DBS_20090461 | nO | N01 | F | 2009 | Human (urine) | Scotland | Sco | SAGOXB.0013 |  | 138 | 183094 | 4760138 | 74 | 10568606 | 166.5173257582028 |  | 4729 | 59 | 4 | ERS180382 | PRJEB1135 | CARB01000001-138
 |  |  |  |  |  |  |  |  |  | Mean: | 173 | 144849 | 4782841
Resequenced genomes*
05A.O.06 | MC_06-0567 | yes | / | / | 2006 | Human (feces) | Ireland | IE | AgoX3 |  | 151 | 183363 | 4796058 | 74 | 9586444 | 149.9113021568963 |  | 4776 | 63 | 4
16A.H.08 | DBS_20080506 | yes | / | / | 2008 | Human (feces) | Scotland | Sco | AgoX59 |  | 153 | 154565 | 4713739 | 74 | 8007570 | 127.4079345504704 |  | 4746 | 67 | 4
20A.H.06 | DBS_20060793 | yes | / | / | 2006 | Human (feces) | Scotland | Sco | AgoX31 |  | 164 | 162907 | 4792019 | 74 | 8281852 | 129.6194568510684 |  | 4815 | 73 | 8
22A.H.04 | DBS_20042479 | Yes | / | / | 2004 | Human (feces) | Scotland | Sco | SAGOXB.0024b |  | 131 | 183406 | 4762272 | 74 | 9903430 | 155.9669943253976 |  | 4777 | 55 | 3
44A.E.09 | SF_R0041-09 | yes | / | / | 2009 | Environment (waste water) | Ireland | IE | AgoX67 |  | 326 | 185613 | 4749371 | 74 | 5062828 | 79.94997653373468 |  | 4748 | 70 | 5
50A.E.08 | MC_08-0968 | yes | / | / | 2008 | Environment(Food plant) | Ireland | IE | AgoX67 |  | 152 | 185636 | 4745683 | 74 | 5730482 | 90.56360275222765 |  | 4748 | 71 | 5
60A.O.08 | DBS_20080895 | yes | / | / | 2008 | Human (feces) | Scotland | Sco | SAGOXB.0066 |  | 142 | 185556 | 4713412 | 74 | 7192082 | 114.4406960393023 |  | 4700 | 70 | 5
61A.O.08 | DBS_20080935 | yes | / | / | 2008 | Human (feces) | Scotland | Sco | SAGOXB.0066 |  | 175 | 154753 | 4781532 | 74 | 8161026 | 128.0085441235152 |  | 4700 | 74 | 6
68A.U.05 | DBS_20052893 | yes | / | / | 2005 | Unknown | Scotland | Sco | SAGOXB.0009 |  | 193 | 148828 | 4844779 | 74 | 9781930 | 151.4299723475519 |  | 4740 | 56 | 8
69A.H.06 | DBS_20062828 | yes | / | / | 2006 | Human (feces) | Scotland | Sco | SAGOXB.0070 |  | 142 | 215328 | 4748434 | 74 | 6118912 | 96.64626274683401 |  | 4828 | 75 | 6
Note: *Resequenced genomes did not contain any additional SNPs relative to the primary sequences, and were not used in the final analysis.
Country Code - ISO Country Codes except that "Sco" and "Eng" refer to Scotland and England, respectively
No. of substitutions - Mutational substitutions relative to the MRCA
No. of indels - Mutational indels relative to the MRCA