Spreadsheet: 6feb2ddd-ebfc-4444-a295-0675f9bacd53
Sheet: Sheet1

Supplemental Table S3. Annotation of newly discovered putative P. vivax genes. | Unnamed: 1 | Unnamed: 2 | Unnamed: 3 | Unnamed: 4 | Unnamed: 5 | Unnamed: 6 | Unnamed: 7 | Unnamed: 8 | Unnamed: 9 | Unnamed: 10 | Unnamed: 11
P. vivax genes were identified by BLAST search of all P. falciparum and P. knowlesi genes against the P. vivax genome. Coordinates are based on BLAST hit similarity coordinates in P. vivax. The open reading frame for proper gene translation has not been validated nor have we defined intron-exon boundaries for these genes. New GeneID indicates the putative gene ID# according to PlasmoDB 5.5 annotation. Putative Gene ID indicates the putative gene ID# according to PlasmoDB 5.4 annotation, identical to gene names listed in Table S1. Alias indicates the temporary gene name based on ortholog gene numbers. Description is translated from P. falciparum or P. knowlesi orthologs. Start and End numbers and Strand are given relative to the chromosome assembly of PlasmoDB 5.5.
New GeneID | Putative GeneID | Alias | Description | Chromosome | Contig | Start | End | Strand | Length | P. falciparum ortholog | P. knowlesi ortholog
PVX_082436 | Pv082436 | Pv_MAL13P1.158_PKH_122280 | hypothetical protein, conserved|hypothetical protein, conserved in Plasmodium species|missing gene in syntenic region|correct Pf, Pk orthologs | 12 | CM000453 | 907828 | 909867 | - | 2039 | MAL13P1.158 | PKH_122280
PVX_083031 | Pv083031 | Pv_MAL13P1.213_PKH_121180 | transcription activator, putative|transcription activator, putative|missing gene in syntenic region|correct Pf, Pk orthologs | 12 | CM000453 | 501144 | 501236 | + | 92 | MAL13P1.213 | PKH_121180
PVX_122741 | Pv122741 | Pv_MAL13P1.97 | hypothetical protein|missing gene in syntenic region|Pf, no gene model in Pk syntenic region | 14 | CM000455 | 830645 | 831054 | + | 409 | MAL13P1.97
PVX_096251 | Pv096251 | Pv_MAL7P1.118_PKH_031580 | PelOta [NAME], putative|PelOta protein homologue, putative|missing gene in syntenic region|correct Pf, Pk orthologs | 3 | CM000444 | 667653 | 668825 | + | 1172 | MAL7P1.118 | PKH_031580
PVX_096106 | Pv096106 | Pv_MAL7P1.133 | hypothetical protein, conserved|missing gene in syntenic region|only in pf and pb, not in pk or py | 3 | CM000444 | 758371 | 758884 | - | 513 | MAL7P1.133
PVX_096071 | Pv096071 | [NAME] | hypothetical protein, conserved|hypothetical protein, conserved in Plasmodium species|no synteny in this region|correct Pf, Pk orthologs | 3 | CM000444 | 803009 | 803245 | + | 236 | MAL7P1.141 | PKH_031910
PVX_122946 | Pv122946 | Pv_MAL7P1.69_PKH_142170 | calmodulin, putative|calmodulin, putative|missing gene in syntenic region|correct Pf, Pk orthologs | 14 | CM000455 | 1024221 | 1024973 | - | 752 | MAL7P1.69 | PKH_142170
PVX_093606 | Pv093606 | [NAME] | hypothetical protein, conserved|hypothetical protein, conserved in Plasmodium species|missing gene in syntenic region|correct Pf, Pk orthologs | 1 | CM000442 | 676336 | 677863 | - | 1527 | MAL8P1.149 | PKH_011560
PVX_089086 | Pv089086 | Pv_MAL8P1.25a_PKH_050560 | hypothetical protein, conserved|hypothetical protein, conserved in Apicomplexan species|missing gene in syntenic region|correct Pf, Pk orthologs | 5 | CM000446 | 305479 | 306035 | - | 556 | MAL8P1.25a | PKH_050560
PVX_122961 | Pv122961 | Pv_PF07_0060_PKH_142220 | hypothetical protein, conserved|hypothetical protein, conserved in Plasmodium species|missing gene in syntenic region|correct Pf, Pk orthologs | 14 | CM000455 | 1038851 | 1039316 | - | 465 | PF07_0060 | PKH_142220
PVX_123306 | Pv123306 | Pv_PF08_0101_PKH_142920 | hypothetical protein, conserved|hypothetical protein, conserved in Apicomplexan species|missing gene in syntenic region|correct Pf, Pk orthologs | 14 | CM000455 | 1333651 | 1336161 | - | 2510 | [NAME] | PKH_142920
PVX_110846 | Pv110846 | Pv_PF10_0420_PKH_062250 | hypothetical protein|hypothetical protein, conserved in Plasmodium species|displayed as not syntenic but looks to be in the right place|correct Pf, Pk orthologs | 6 | CM000447 | 449633 | 451335 | + | 1702 | PF10_0420 | PKH_062250
PVX_091091 | Pv091091 | Pv_PF11_0095a | pterin-4a-carbinolamine dehydratase|missing gene in syntenic region|pf, no pk ortholog | 9 | CM000450 | 258773 | 259271 | + | 498 | PF11_0095a
PVX_091166 | Pv091166 | Pv_PF11_0110 | hypothetical protein|missing exon of PVX_091165?|pf was reannotated to put this gene together with PF11_0109, pk has multiple exons | 9 | CM000450 | 307429 | 307527 | - | 98 | PF11_0110
PVX_091296 | Pv091296 | Pv_PF11_0136 | hypothetical protein|missing exon of PVX_091295?|pf was reannotated to put this gene together with PF11_0135, pk ortholog for PF11_0135 but not PF11_0136 | 9 | CM000450 | 393490 | 393763 | - | 273 | PF11_0136
PVX_091716 | Pv091716 | Pv_PF11_0228_PKH_091940 | hypothetical protein|hypothetical protein, conserved in Apicomplexan species|missing gene in syntenic region|correct Pf, Pk orthologs | 9 | CM000450 | 755115 | 756879 | - | 1764 | PF11_0228 | PKH_091940
PVX_091751 | Pv091751 | Pv_PF11_0238 | hypothetical protein|missing gene in syntenic region|Pf, no hits to pk ortholog PKH_092020 | 9 | CM000450 | 787693 | 788415 | - | 722 | PF11_0238
PVX_091921 | Pv091921 | Pv_PF11_0271_PKH_092370 | hypothetical protein, [NAME] family protein, putative|missing gene in syntenic region|correct Pf, Pk orthologs | 9 | CM000450 | 948811 | 952578 | - | 3767 | PF11_0271 | PKH_092370
PVX_092596 | Pv092596 | Pv_PF11_0410_PF11_0411 | hypothetical protein|hypothetical protein|missing gene in syntenic region|pf reannotated to join [NAME] and [NAME], no pk ortholog | 9 | CM000450 | 1558637 | 1559596 | + | 959 | PF11_0410 | PF11_0411
PVX_116651 | Pv116651 | Pv_PF13_0138_PKH_122870 | hypothetical protein, conserved|MSF1-like protein, putative|missing gene in syntenic region|correct Pf, Pk orthologs | 12 | CM000453 | 1170244 | 1171076 | - | 832 | PF13_0138 | PKH_122870
PVX_085876 | Pv085876 | Pv_PF14_0113_PKH_133610 | hypothetical protein|hypothetical protein, conserved in Plasmodium species|missing gene in syntenic region|correct Pf, Pk orthologs | 13 | CM000454 | 1586344 | 1589039 | - | 2695 | PF14_0113 | [NAME]
PVX_085566 | Pv085566 | Pv_PF14_0176 | hypothetical protein|missing gene in syntenic region|Pf, no Pk ortholog but synteny messed up for Pk | 13 | CM000454 | 1287101 | 1288229 | - | 1128 | PF14_0176
PVX_085491 | Pv085491 | Pv_PF14_0191_PKH_132930 | hypothetical protein|hypothetical protein, conserved in Plasmodium species|missing gene in syntenic region|correct Pf, Pk orthologs | 13 | CM000454 | 1212814 | 1214283 | - | 1469 | PF14_0191 | PKH_132930
PVX_084836 | Pv084836 | Pv_PF14_0320_PKH_131540 | [NAME], putative|Kinase, putative|missing gene in syntenic region|correct Pf, Pk orthologs | 13 | CM000454 | 688096 | 693708 | - | 5612 | PF14_0320 | PKH_131540
PVX_118291 | Pv118291 | Pv_PF14_0418_PKH_126230 | hypothetical protein|hypothetical protein, conserved in Plasmodium species|missing gene in syntenic region|correct Pf, Pk orthologs | 12 | CM000453 | 2577507 | 2578749 | - | 1242 | PF14_0418 | PKH_126230
PVX_117321 | Pv117321 | Pv_PF14_0598_PKH_124290 | glyceraldehyde-3-phosphate dehydrogenase|glyceraldehyde-3-phosphate dehydrogenase, putative|missing gene in syntenic region|correct Pf, Pk orthologs | 12 | CM000453 | 1772273 | 1773651 | - | 1378 | PF14_0598 | PKH_124290
PVX_117061 | Pv117061 | Pv_PF14_0648_PKH_123740 | hypothetical protein|hypothetical protein, conserved in Plasmodium species|missing gene in syntenic region|correct Pf, Pk orthologs | 12 | CM000453 | 1520088 | 1527095 | - | 7007 | PF14_0648 | PKH_123740
PVX_081306 | Pv081306 | Pv_PFA0470c_PKH_020390 | cold-shock protein, putative|cold-shock protein, putative|missing gene in syntenic region|correct Pf, Pk orthologs | 2 | CM000443 | 242575 | 242969 | + | 394 | PFA0470c | [NAME]
PVX_119586 | Pv119586 | Pv_PFC0400w_PKH_083060 | [NAME] ribosomal protein [NAME] ribosomal protein P2, putative|missing gene in syntenic region|correct Pf, Pk orthologs | 8 | CM000449 | 1358505 | 1358837 | - | 332 | PFC0400w | PKH_083060
PVX_095451 | Pv095451 | Pv_PFC0680w | hypothetical protein, conserved|missing gene in syntenic region|pf, no pk ortholog | 8 | CM000449 | 1119961 | 1120182 | - | 221 | PFC0680w
PVX_095296 | Pv095296 | Pv_PFC0830w | trophozoite stage antigen|missing gene in syntenic region|pf, no pk ortholog | 8 | CM000449 | 969378 | 969580 | - | 202 | PFC0830w
PVX_097771 | Pv097771 | Pv_PFE0200c_PKH_102890 | hypothetical protein, conserved|hypothetical protein, conserved in Plasmodium species|missing gene in syntenic region|correct Pf, Pk orthologs | 10 | CM000451 | 1175002 | 1176303 | + | 1301 | PFE0200c | PKH_102890
PVX_097851 | Pv097851 | Pv_PFE0290c_PKH_102710 | hypothetical protein, conserved|hypothetical protein, conserved in Plasmodium species|missing gene in syntenic region|correct Pf, Pk orthologs | 10 | CM000451 | 1090050 | 1090839 | + | 789 | PFE0290c | PKH_102710
PVX_113566 | Pv113566 | Pv_PFF0400w_PKH_114120 | hypothetical protein, conserved|hypothetical protein, conserved in Plasmodium species|missing gene in syntenic region|correct Pf, Pk orthologs | 11 | CM000452 | 1693977 | 1697534 | - | 3557 | PFF0400w | PKH_114120
PVX_113616 | Pv113616 | Pv_PFF0455w_PKH_114000 | citrate synthase-like protein, putative|Citrate synthase-like, putative|missing gene in syntenic region|correct Pf, Pk orthologs | 11 | CM000452 | 1641441 | 1643097 | - | 1656 | PFF0455w | [NAME]
PVX_113724 | Pv113724 | Pv_PFF0573c | 60S ribosomal protein L39, putative|missing gene in syntenic region|Pf, no Pk ortholog - synteny looks messed up with Pk | 11 | CM000452 | 1553629 | 1553718 | + | 89 | PFF0573c
PVX_113796 | Pv113796 | Pv_PFF0640w | hypothetical protein, conserved|missing gene in syntenic region|Pf, no Pk ortholog in syntenic region | 11 | CM000452 | 1501355 | 1501507 | - | 152 | PFF0640w
PVX_098711 | Pv098711 | Pv_PFI0265c_PKH_070260 | RhopH3|rhoptry protein, putative|missing gene in syntenic region|correct Pf, Pk orthologs | 7 | CM000448 | 174338 | 178178 | - | 3840 | [NAME] | PKH_070260
PVX_099526 | Pv099526 | Pv_PFI1095w | hypothetical protein, conserved|missing gene in syntenic region|pf hit, no hit to pk ortholog, PKH_071950 | 7 | CM000448 | 846544 | 848141 | + | 1597 | PFI1095w
PVX_087141 | Pv087141 | Pv_PFI1515w_PKH_072950 | hypothetical protein, conserved|hypothetical protein, conserved in Plasmodium species|missing gene in syntenic region|correct Pf, Pk orthologs | 7 | CM000448 | 1216441 | 1217133 | + | 692 | PFI1515w | PKH_072950
PVX_084461 | Pv084461 | Pv_PFL0430w_PKH_130750 | tim10 homologue, putative|Tim10 homologue, putative|missing gene in syntenic region|Pf and Pk not marked as orthologs | 13 | CM000454 | 331915 | 332139 | + | 224 | PFL0430w | PKH_130750
PVX_123351 | Pv123351 | Pv_PFL0637c | hypothetical protein, pseudogene|missing gene in syntenic region|Pf says psuedogene, no gene model in Pk syntenic region | 14 | CM000455 | 1388321 | 1388539 | - | 218 | PFL0637c
PVX_123631 | Pv123631 | Pv_PFL0957w | hypothetical protein|missing gene in syntenic region|Pf, no gene model in Pk syntenic region | 14 | CM000455 | 1607836 | 1607955 | + | 119 | PFL0957w
PVX_123681 | Pv123681 | Pv_PFL1005c_PKH_143750 | chromodomain protein|chromodomain protein, putative|missing gene in syntenic region|correct Pf, Pk orthologs | 14 | CM000455 | 1651899 | 1652723 | - | 824 | PFL1005c | PKH_143750
PVX_101361 | Pv101361 | Pv_PFL2375c_PKH_146680 | cutA, putative|cutA homologue, putative|missing gene in syntenic region|correct Pf, Pk orthologs | 14 | CM000455 | 2824757 | 2825718 | - | 961 | PFL2375c | PKH_146680
PVX_088006 | Pv088006 | Pv_PKH_010770_MAL7P1.28 | POP1-like nucleolar ribonuclease, putative|ribonucleases p/mrp protein subunit, putative|missing gene in syntenic region|correct Pf, Pk orthologs | 1 | CM000442 | 357479 | 361247 | - | 3768 | MAL7P1.28 | PKH_010770
PVX_093681 | Pv093681 | Pv_PKH_011730 | hypothetical protein, conserved in Plasmodium species|orthologous genes upstream and downstream in Pk|pk subtelomeric | 1 | CM000442 | 777145 | 777950 | - | 805 |  | PKH_011730
PVX_096991 | Pv096991 | Pv_PKH_020070 | hypothetical protein, conserved in Plasmodium species|orthologous genes upstream and downstream in Pk|pk subtelomeric | 2 | CM000443 | 103593 | 104986 | - | 1393 |  | PKH_020070
PVX_097001 | Pv097001 | Pv_PKH_020100 | hypothetical protein, conserved in Plasmodium species|orthologous genes upstream and downstream in Pk|pk subtelomeric | 2 | CM000443 | 120284 | 121273 | - | 989 |  | PKH_020100
[NAME] | [NAME] | Pv_PKH_020960_PFA0185w | hypothetical protein, conserved in Plasmodium species|hypothetical protein, conserved|missing gene in syntenic region|correct Pf, Pk orthologs | 2 | CM000443 | 449258 | 451447 | - | 2189 | PFA0185w | PKH_020960
PVX_081706 | Pv081706 | Pv_PKH_021250 | hypothetical protein, conserved in Plasmodium species|missing gene in syntenic region|pf ortholog did not hit, PF07_0118 | 2 | CM000443 | 583714 | 598638 | - | 14924 |  | PKH_021250
PVX_081846 | Pv081846 | Pv_PKH_021570 | hypothetical protein, conserved in Plasmodium species|orthologous gene downstream in Pk|pk subtelomeric | 2 | CM000443 | 747686 | 748432 | - | 746 |  | PKH_021570
PVX_001061 | Pv001061 | Pv_PKH_031110 | hypothetical protein|missing gene in syntenic region|only in ok | 3 | CM000444 | 50097 | 50228 | - | 131 |  | PKH_031110
PVX_001062 | Pv001062 | Pv_PKH_031120 | hypothetical protein|missing gene in syntenic region|only in pk | 3 | CM000444 | 46153 | 46524 | - | 371 |  | PKH_031120
PVX_096306 | Pv096306 | Pv_PKH_031410_MAL7P1.105 | hypothetical protein, conserved in Plasmodium species|hypothetical protein, conserved|missing gene in syntenic region|correct Pf, Pk orthologs | 3 | CM000444 | 608130 | 608645 | - | 515 | MAL7P1.105 | [NAME]
PVX_096301 | Pv096301 | Pv_PKH_031430_MAL7P1.106 | hypothetical protein, conserved in Plasmodium species|hypothetical protein, conserved|missing gene in syntenic region|correct Pf, Pk orthologs | 3 | CM000444 | 613356 | 614158 | + | 802 | MAL7P1.106 | PKH_031430
PVX_096266 | Pv096266 | Pv_PKH_031530_MAL7P1.115 | hypothetical protein, conserved in Plasmodium species|hypothetical membrane protein, conserved|missing gene in syntenic region|pf and pk not marked as orthologs | 3 | CM000444 | 653002 | 655194 | + | 2192 | MAL7P1.115 | PKH_031530
PVX_089291 | Pv089291 | Pv_PKH_050960 | hypothetical protein, conserved in Plasmodium species|missing gene in syntenic region|pk, no hits to pf ortholog MAL8P.52 | 5 | CM000446 | 435729 | 436707 | - | 978 |  | PKH_050960
PVX_089542 | Pv089542 | Pv_PKH_051480 | hypothetical protein, conserved in Plasmodium species|missing gene in syntenic region|pk, no hits to pf ortholog PF08_0060 | 5 | CM000446 | 654905 | 656533 | + | 1628 |  | [NAME]
PVX_089541 | Pv089541 | Pv_PKH_051490_MAL8P1.74 | hypothetical protein, conserved in Plasmodium species|hypothetical protein, conserved|missing gene in syntenic region|correct Pf, Pk orthologs | 5 | CM000446 | 649780 | 651402 | + | 1622 | MAL8P1.74 | PKH_051490
PVX_089631 | Pv089631 | Pv_PKH_051710_MAL8P1.85 | hypothetical protein, conserved in Plasmodium species|hypothetical protein, conserved|syntenic break|correct Pf, Pk orthologs | 5 | CM000446 | 713502 | 714083 | + | 581 | MAL8P1.85 | PKH_051710
[NAME] | Pv089666 | Pv_PKH_051790_PFD0692c | centrin, putative|hypothetical protein, conserved|missing gene in syntenic region|correct Pf, Pk orthologs | 5 | CM000446 | 749676 | 750377 | - | 701 | PFD0692c | PKH_051790
PVX_090136 | Pv090136 | Pv_PKH_052530 | hypothetical protein, conserved in Plasmodium species|missing gene in syntenic region|pk hit, no hits to pf gene in this region, PFD1007w | 5 | CM000446 | 1169372 | 1169593 | + | 221 |  | PKH_052530
[NAME] | Pv111436 | Pv_PKH_060970_PF10_0248 | hypothetical protein, conserved in Plasmodium species|hypothetical protein|missing gene in syntenic region|correct Pf, Pk orthologs | 6 | CM000447 | 901620 | 903627 | + | 2007 | PF10_0248 | PKH_060970
PVX_111416 | Pv111416 | Pv_PKH_061030_PF10_0255_PKH_061020 | hypothetical protein, conserved in Plasmodium species|hypothetical protein|hypothetical protein, conserved in Plasmodium species|missing exons of another gene?|multiple exons in pf, 2 genes in pk | 6 | CM000447 | 875774 | 878981 | + | 3207 | PF10_0255 | PKH_061030
PVX_110901 | Pv110901 | Pv_PKH_062140_PF10_0364 | hypothetical protein, conserved in Plasmodium species|hypothetical protein|missing gene in syntenic region|correct Pf, Pk orthologs | 6 | CM000447 | 491328 | 491846 | - | 518 | PF10_0364 | PKH_062140
[NAME] | Pv098846 | Pv_PKH_070550_PFI0390c | hypothetical protein, conserved in Plasmodium species|hypothetical membrane protein, conserved|missing gene in syntenic region|correct Pf, Pk orthologs | 7 | CM000448 | 293504 | 295114 | - | 1610 | PFI0390c | PKH_070550
[NAME] | [NAME] | Pv_PKH_071370_PFI0805w | hypothetical protein, conserved in Plasmodium species|hypothetical protein, conserved|missing gene in syntenic region|correct Pf, Pk orthologs | 7 | CM000448 | 615686 | 621511 | + | 5825 | PFI0805w | PKH_071370
PVX_087041 | Pv087041 | Pv_PKH_073150 | hypothetical protein, conserved in Plasmodium species|missing gene in syntenic region|correct Pf, Pk orthologs | 7 | CM000448 | 1279284 | 1283060 | + | 3776 |  | PKH_073150
PVX_121911 | Pv121911 | Pv_PKH_073420_PKH_140010_PKH_010030 | hypothetical protein, conserved in Plasmodium species|hypothetical protein, conserved in Plasmodium species|hypothetical protein (fragment)|no genes here, but EST data|conserved in pk | 14 | CM000455 | 87536 | 88883 | + | 1347 |  | PKH_073420
PVX_094461 | Pv094461 | [NAME] | hypothetical protein, conserved in Plasmodium species|hypothetical protein|missing gene in syntenic region|correct Pf, Pk orthologs | 8 | CM000449 | 265526 | 266269 | - | 743 | PF10_0056 | [NAME]
PVX_090971 | Pv090971 | Pv_PKH_090310_PF11_0070 | hypothetical protein, conserved in Plasmodium species|hypothetical protein|missing gene in syntenic region|correct Pf, Pk orthologs - pf ortholog fixed in reannotation | 9 | CM000450 | 143183 | 143578 | + | 395 | PF11_0070 | PKH_090310
[NAME] | Pv091306 | Pv_PKH_091040 | hypothetical protein, conserved in Plasmodium species|displayed at end of syntenic region|pk, no hits to pf ortholog | 9 | CM000450 | 421038 | 421316 | + | 278 |  | PKH_091040
PVX_091663 | Pv091663 | Pv_PKH_091820_PF11_0215 | hypothetical protein, conserved in Plasmodium species|hypothetical protein|missing gene in syntenic region|correct Pf, Pk orthologs | 9 | CM000450 | 704777 | 705007 | + | 230 | PF11_0215 | PKH_091820
PVX_080146 | Pv080146 | Pv_PKH_101020 | hypothetical protein, conserved in Plasmodium species|missing gene in syntenic region|Pk, but no hits to pf ortholog PFE1100w | 10 | CM000451 | 429051 | 429870 | - | 819 |  | PKH_101020
PVX_080616 | Pv080616 | Pv_PKH_102010 | hypothetical protein, conserved in Plasmodium species|missing gene in syntenic region|Pk, no gene model in Pf syntenic region but there is one in Py | 10 | CM000451 | 805696 | 806730 | - | 1034 |  | PKH_102010
PVX_080656 | Pv080656 | Pv_PKH_102140_PFE0575c | hypothetical protein, conserved in Plasmodium species|hypothetical protein, conserved|missing gene in syntenic region|correct Pf, Pk orthologs | 10 | CM000451 | 828201 | 828749 | + | 548 | PFE0575c | PKH_102140
PVX_098021 | Pv098021 | Pv_PKH_102360_PFE0460c | hypothetical protein, conserved in Plasmodium species|hypothetical protein, conserved|missing gene in syntenic region|correct Pf, Pk orthologs, ALSO missing ortholog to PFE0455w and PKH_102370 | 10 | CM000451 | 963020 | 963662 | + | 642 | PFE0460c | PKH_102360
PVX_097581 | Pv097581 | Pv_PKH_103200 | hypothetical protein, conserved in Plasmodium species|end of syntenic region, but looks to be in correct place | 10 | CM000451 | 1326953 | 1327402 | - | 449 |  | PKH_103200
PVX_114891 | Pv114891 | Pv_PKH_111260_MAL13P1.287 | hypothetical protein, conserved in Plasmodium species|hypothetical protein, conserved|missing gene in syntenic region|correct Pf, Pk orthologs | 11 | CM000452 | 542191 | 543089 | - | 898 | [NAME] | PKH_111260
PVX_083261 | Pv083261 | Pv_PKH_120660 | hypothetical protein, conserved in Plasmodium species|missing gene in syntenic region|Pk, no hits to Pf ortholog MAL13P1.236 | 12 | CM000453 | 269764 | 271124 | + | 1360 |  | PKH_120660
PVX_082741 | Pv082741 | Pv_PKH_121750_PF13_0202 | hypothetical protein, conserved in Plasmodium species|hypothetical protein, conserved|missing gene in syntenic region|correct Pf, Pk orthologs | 12 | CM000453 | 724411 | 724683 | - | 272 | PF13_0202 | PKH_121750
PVX_116556 | Pv116556 | Pv_PKH_122650_MAL13P1.144 | hypothetical protein, conserved in Plasmodium species|hypothetical protein, conserved|missing gene in syntenic region|correct Pf, Pk orthologs | 12 | CM000453 | 1088385 | 1091200 | + | 2815 | MAL13P1.144 | PKH_122650
PVX_116891 | Pv116891 | Pv_PKH_123370 | hypothetical protein, conserved in Plasmodium species|missing gene in syntenic region|correct Pf, Pk orthologs | 12 | CM000453 | 1366824 | 1373521 | - | 6697 |  | PKH_123370
[NAME] | Pv117191 | Pv_PKH_124020_PF14_0621 | hypothetical protein, conserved in Plasmodium species|hypothetical protein|missing gene in syntenic region|correct Pf, Pk orthologs | 12 | CM000453 | 1662009 | 1662203 | + | 194 | PF14_0621 | PKH_124020
PVX_084278 | Pv084278 | Pv_PKH_130340 | hypothetical protein|missing gene in syntenic region|correct Pf, Pk orthologs | 13 | CM000454 | 138314 | 139115 | + | 801 |  | PKH_130340
PVX_084686 | Pv084686 | Pv_PKH_131220_PF14_0351 | hypothetical protein, conserved in Apicomplexan species|hypothetical protein|missing gene in syntenic region|Pf, no Pk ortholog but synteny messed up for Pk | 13 | CM000454 | 542354 | 543243 | - | 889 | PF14_0351 | PKH_131220
PVX_085171 | Pv085171 | Pv_PKH_132310 | hypothetical protein, conserved in Plasmodium species (fragment)|missing gene in syntenic region|Pk, no Pf ortholog | 13 | CM000454 | 973071 | 973886 | - | 815 |  | PKH_132310
PVX_085201 | Pv085201 | Pv_PKH_132380_PF14_0245 | hypothetical protein, conserved in Plasmodium species|hypothetical protein|missing gene in syntenic region|correct Pf, Pk orthologs | 13 | CM000454 | 1007144 | 1011247 | + | 4103 | PF14_0245 | PKH_132380
PVX_113736 | Pv113736 | Pv_PKH_133830 | hypothetical protein, conserved in Plasmodium species|missing gene in syntenic region|Pk, PF14_0093 is syntenic but not marked as ortholog | 11 | CM000452 | 1537312 | 1537512 | + | 200 |  | PKH_133830
PVX_085976 | Pv085976 | Pv_PKH_133830 | hypothetical protein, conserved in Plasmodium species|missing gene in syntenic region|Pf, Pk synteny is all strange, but maybe a gene in this region | 13 | CM000454 | 1700777 | 1704670 | - | 3893 |  | PKH_133830
PVX_086021 | Pv086021 | Pv_PKH_133890_PF14_0082 | hypothetical protein, conserved in Plasmodium species|hypothetical protein|missing gene in syntenic region|correct Pf, Pk orthologs | 13 | CM000454 | 1755956 | 1756587 | - | 631 | PF14_0082 | PKH_133890
PVX_121926 | Pv121926 | Pv_PKH_140030 | hypothetical protein, conserved in Plasmodium species|no synteny in this region | 14 | CM000455 | 112823 | 113203 | - | 380 |  | [NAME]
PVX_122206 | Pv122206 | Pv_PKH_140640_PF13_0039 | hypothetical protein, conserved in Plasmodium species|hypothetical protein, conserved|missing gene in syntenic region|correct Pf, Pk orthologs | 14 | CM000455 | 375010 | 375276 | - | 266 | PF13_0039 | PKH_140640
PVX_122458 | Pv122458 | Pv_PKH_141170 | hypothetical protein, conserved in Plasmodium species | 14 | CM000455 | 578725 | 578929 | - | 204 |  | PKH_141170
PVX_123356 | Pv123356 | Pv_PKH_143060 | hypothetical protein, conserved in Plasmodium species|missing gene in syntenic region|correct Pf, Pk orthologs - but Pk near end of region of synteny | 14 | CM000455 | 1390688 | 1391185 | - | 497 |  | PKH_143060
PVX_123591 | Pv123591 | Pv_PKH_143550_PFL0890c | transporter, putative|triose Pi or hexose Pi: Pi antiporter; transporter|missing gene in syntenic region|correct Pf, Pk orthologs | 14 | CM000455 | 1548817 | 1551675 | - | 2858 | PFL0890c | PKH_143550