Spreadsheet: 005b9685-f1e3-4d76-a113-44a6c990f23a
Sheet: Sheet1

Supplementary [NAME]. HEK293 proteins increased >95% confidencea | Unnamed: 1 | Unnamed: 2 | Unnamed: 3 | Unnamed: 4 | Unnamed: 5 | Unnamed: 6 | Unnamed: 7 | Unnamed: 8 | Unnamed: 9 | Unnamed: 10
Accession | HGNC | Name | 6 hpi |  |  |  | 24hpi
 |  |  | z-score |  |  | L:H ratiob | z-score |  |  | L:H ratiob
 |  |  | Expt 1 | Expt 2 | Expt 3 |  | Expt 1 | Expt 2 | Expt 3
Proteins measured in >1 experiment (at a single time point)
34416 | LTF | [NAME] | 6.88919790742344 |  |  | 8.878230750437604 | 7.716944275060077 | 4.333658507813264 | 7.080771493037748 | 8.722243474649273
6013427 | ALBU | serum albumin precursor |  |  | 9.222197217457442 | 5.852525715997995 | 3.348315963199726 | 7.57918693069753 | 3.493672850341522 | 5.022734078641032
17318569 | K2C1 | keratin 1 | 4.675349660716869 | 5.130022972788101 |  | 4.796440733979074 | 9.11957729791795 |  |  | 38.34675777
1683637 | BAD | Bcl-2 binding component 6 | 3.128884654588874 | 4.675095765597508 |  | 3.497266693581786 | -0.7734063945437231 |  |  | 0.760856153
25058739 | ALB | ALB protein | 3.323000900434643 | 3.516629922970234 |  | 3.004820620130218
9963783 | [NAME] | RNA helicase | 5.24759066773471 | 0.9419767123133889 |  | 2.714928142846873 | 4.08488180836583 | 0.5438856261325685 |  | 2.511072010937599
4557325 | APOE | apolipoprotein E precursor | 4.514176382344261 | 1.591420088861712 |  | 2.678333291369728 | 4.632890684505694 |  |  | 6.480981995999999
6563288 | UBQL2 | ubiquitin-like product Chap1/Dsk2 | 0.4733912397405247 | 5.62342881597345 |  | 2.669512431444779 | 0.304653023895754 | -0.3109037323328713 | -0.2637397384256558 | 1.002269634588288
16553095 | ASPC1 | unnamed protein product | 0.7236455296482536 | 4.681437024809222 |  | 2.394290151801929 | 2.133065311597154 |  |  | 2.406912978
56204388 | MEA1 | male-enhanced antigen | 5.259322434350152 | -0.2110828142878956 |  | 2.26833573876242 | 0.09543700993247353 | -1.046894778679011 |  | 0.8772932307841297
20336350 | HCD2 | endoplasmic reticulum-associated amyloid beta peptide-binding protein | 2.508265488164975 |  |  | 2.224910977696302 | 2.68660886405527 | 0.4067010734476508 |  | 1.861079191414087
4885217 | XPF | excision repair cross-complementing rodent repair deficiency, complementation group 4 |  | 2.211581433644245 |  | 2.079946167
55959029 | UBE2T | ubiquitin conjugating enzyme | 0.09256664324697804 | 4.255597148073363 |  | 2.026590162206087 | 0.3470146113661038 |  |  | 1.186067209
22671717 | HBA2 | [NAME] | 0.355078100215797 | 3.958807156487854 |  | 2.015931460104526 | 3.338101897510855 | 3.604013230092938 |  | 3.579748046349638
55660909 | SC23B | Sec23 homolog B (S. cerevisiae) | 0.5027433992573548 | 3.766559432134033 |  | 2.001968636168961 | 0.3923817355059525 |  |  | 1.20758098
29792115 | SMAD3 | SMAD, mothers against DPP homolog 3 (Drosophila) | 0.9605037772246919 | 3.268920762099105 |  | 1.989868460242318 | 1.675913813684134 |  |  | 2.008130087
48734878 | Q6IPH7 | [NAME] protein | 2.425199922417509 | 3.454093623461503 | 0.6852181029144935 | 1.968198828260265 | 1.000314369269775 | 1.480118263874336 | 3.280271461217558 | 1.852397091200068
7020506 | UB2R2 | unnamed protein product | 0.284975964733704 | 3.861529345981292 |  | 1.963425814814813 | 0.1154731809818333 |  |  | 1.082093229
4505571 | SQSTM | sequestosome 1 | 0.17800362024398 | 3.562141122845394 |  | 1.841629088525043 | 0.7539883493670811 |  |  | 1.393615749
57208697 | REPS1 | RALBP1 associated Eps domain containing 1 | 3.560439570869643 | -0.06527532661108146 |  | 1.774782807726479 | 1.261165107781134 |  |  | 1.703806017
14042287 | NRBP | unnamed protein product | 0.0269633362998604 | 3.363127339654616 |  | 1.742735428846904 | -0.03707171439821347 |  |  | 1.018624493
4589628 | PALLD | KIAA0992 protein | 0.3522729923230946 | 2.989597501409284 |  | 1.729819485790102
55962212 | CTBP2 | C-terminal binding protein 2 | 1.320369803364888 | 1.975431646261631 |  | 1.718104783558942 | -0.9293670000807489 |  |  | 0.7152604349999999
55749758 | DIP2B | DIP2 disco-interacting protein 2 homolog B | 0.3938603683538811 | 2.60839267817538 |  | 1.639772149635615 | 0.6959167117723106 |  |  | 1.361914472
5803123 | PSMF1 | proteasome inhibitor subunit 1 isoform 1 | 0.5841339864272801 | 3.936142840193859 | 0.0650140458712578 | 1.639399932631621 | 0.3047647877379935 | 2.214037176914599 |  | 1.562157845686828
21961219 | [NAME] | DnaJ (Hsp40) homolog, subfamily B, member 4 | 0.3185861777276219 | 2.678840105386311 |  | 1.638467775293505 | -0.401053183102177 |  |  | 0.8818173880000001
12654999 | DPOA2 | Polymerase (DNA directed), alpha 2 (70kD subunit) | -0.4015042960263001 | 3.385591148088599 |  | 1.634471278129026 | -1.545406876094948 | 1.351984343899253 |  | 0.9398332378157613
13543689 | SLD5 | GINS complex subunit 4 (Sld5 homolog) | 0.6351875501335615 | 2.22958673710915 |  | 1.604838335607396
793843 | RL29 | ribosomal protein L29 | 1.994761431307215 | 0.7315649421936453 |  | 1.571242336493587 | 1.395858676931977 | 1.321787146880481 |  | 1.674826377569921
3970842 | AL1A2 | [NAME] | 0.5851429906806727 | 2.125977172476138 |  | 1.566436671105035 | 0.7003467605899613 |  |  | 1.364307216
56202415 | STX12 | syntaxin 12 | 2.214045761425429 | 0.3831746176816068 |  | 1.539781204967591 |  |  | 0.5501551151977977 | 1.183852702319181
28336 | ACTB | mutant beta-actin (beta'-actin) | 0.6399491269931894 |  | 3.327897548059311 | 1.528945778298412 | -0.4906007549635193 | 1.827817132278803 | 2.432382193440861 | 1.46166096172382
56205198 | SNAPN | SNAP-associated protein | -0.4898341208829974 | 3.047908321441442 |  | 1.528357073947773 | -0.0597221048104243 |  |  | 1.009523285
55962100 | B1AN89 | eukaryotic translation initiation factor 4 gamma, 3 | 0.299712631010445 | 2.169081248192803 |  | 1.507584852055203 | -0.2476963004250067 |  |  | 0.9370633519999999
13477351 | CP080 | Gene trap locus 3 (mouse) | 0.2828792558823151 | 2.168105518355264 |  | 1.503350905153891 | -0.2052464568903631 |  |  | 0.952958307
54696534 | ATPO | ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit (oligomycin sensitivity conferring protein) | 4.092882251461435 | -0.4626333357557225 | 0.1202275372058163 | 1.500089343618572 |  | 0.7841204337085733 | 2.32436577628202 | 1.589906300412637
7705411 | YTHDF2 | YTH domain family, member 2 | -0.1212333069837707 |  | 4.203787454936397 | 1.474190202624644 | -0.5931540796807938 | 0.1585830207763811 | 0.3565957215580969 | 0.9922209751976522
9623363 | DPOE3 | DNA polymerase epsilon p17 subunit | -0.1115839673625199 | 2.393459382144089 |  | 1.463571697264234
55962775 | S10AD | S100 calcium binding protein A13 | 2.203554911455105 | -0.3101309422815749 |  | 1.378241872670527 | 0.6630106129861514 |  |  | 1.344272194
7672784 | HSP7E | heat shock protein HSP60 | -0.1838276049238446 | 2.059084671630747 |  | 1.372749193623256 | 0.2470901882196002 | 2.972872895476469 |  | 1.749373368014524
7576229 | VIME | vimentin | 2.088454438831322 |  | -0.3917360874917648 | 1.346732361879889 | 0.4865289834575313 | -0.8060838043263365 |  | 0.9862107920030729
21749793 | Q8NB80 | unnamed protein product |  | -0.4436908409440439 | 3.378210004882219 | 1.313462139618281 |  | -0.6332829866343359 |  | 0.821240269
7705431 | CCD72 | coiled-coil domain containing 72 |  | -0.001656175993298736 | 2.547513486413964 | 1.300619163433022
48146451 | DBNL | HIP-55 |  | 0.1937784755366419 | 2.139691909676488 | 1.289969549468587 |  | 0.1208436491883725 | 0.9503696773762251 | 1.179420914799784
21750170 | Q8NB11 | unnamed protein product | 1.967692232860978 | -0.5436542858191942 |  | 1.279900930167903 | 1.310788861733835 |  | -0.2016608453736763 | 1.292833459826868
55663125 | SET | SET nuclear oncogene |  | 0.06250224681366358 | 2.139569985085942 | 1.263562249360532 |  | -0.1940606006654666 |  | 0.9486822490000001
9966827 | PCNP | PEST-containing nuclear protein | -0.9498591987364012 | 2.020807943564326 |  | 1.209005104675133 |  | 4.18213162897844 | -0.3573570419815629 | 1.918206915001016
6633995 | SK2L2 | KIAA0052 protein | -0.8752366513318802 | 1.659225506667791 |  | 1.15563003350019 | -0.1948776173487654 | 4.690927952393685 |  | 2.125132832830857
6274552 | STAT1 | signal transducer and activator of transcription 1 isoform alpha | 1.314909116078842 | 0.938199838 |  | 1.110696862195033 | 2.157196473445866 | 1.647006926713594 | 4.135830991146463 | 2.378123764138228
56203909 | DDI2 | DNA-damage inducible protein 2 (DDI2) | 0.242277791552431 |  |  | 1.087539551692793 | 3.326744300295304 | -0.2278992384613257 |  | 1.903635770336528
862457 | ECHA | enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase alpha-subunit of trifunctional protein |  | 0.00961069581322421 |  | 1.039618968 | 2.377613535452257 | 0.6029161178101083 |  | 1.807891124867249
34532659 | Q6ZTT1 | unnamed protein product | 0.2981123750941234 | -0.7427031679183624 | 0.8906671653553797 | 1.02599478368181 | -0.265044391874816 |  | 2.922454234655031 | 1.456486055874852
5738608 | NFU1 | HIRA-interacting protein [NAME] |  | -0.1018962625520474 |  | 1.003743303 | 2.049322970224756 | 0.42784772082234 |  | 1.646037083218509
3287825 | DC1L2 | Cytoplasmic dynein 1 light intermediate chain 2 (Dynein light intermediate chain 2, cytosolic) (LIC53/55) (LIC-2) |  | -0.3581058851308486 |  | 0.9259322260000001 | -0.05757344913520197 | 2.645655546398272 |  | 1.560743464140252
31652283 | ACO13 | thioesterase superfamily member 2 |  | -0.5709566253970737 |  | 0.8658969609999999 | 2.533715572492705 | -0.1577850526472348 |  | 1.645699494306514
31880783 | PELO | pelota [NAME] | -1.105749344666433 |  | -0.92961362441595 | 0.7723960951844568 | -0.4762530781550123 |  | 2.951236009745535 | 1.402360023462272
18490917 | SCG2 | Secretogranin II (chromogranin C) |  |  |  |  | 4.856853005409766 | 6.370002793214929 |  | 7.617262340575407
4731861 | OAS3 | 2'-5'oligoadenylate synthetase 3 |  |  |  |  | 3.391730096093793 | 6.106010216145447 |  | 5.456432165389816
14550514 | ISG15 | ISG15 ubiquitin-like modifier |  |  |  |  | 4.913268594778807 | 4.229816790845798 | 3.476489276286496 | 4.273365497198821
34192824 | IFIT2 | Interferon-induced protein with tetratricopeptide repeats 2 |  |  |  |  | 3.551204746068103 |  | 3.93718654232709 | 3.568760740815419
2653424 | SHIP2 | inositol polyphosphate 5-phosphatase |  |  |  |  | 1.344150899492039 | 3.672980623910644 |  | 2.43897574877355
49574526 | IFIT1 | interferon-induced protein with tetratricopeptide repeats 1 |  |  |  |  | 0.6062467276796394 |  | 4.698778996683604 | 2.212072836136806
47123412 | [NAME] | RPLP0 protein |  |  |  |  |  | 3.380463238296986 | 0.5760623861210391 | 1.91292228507659
51476787 | Q68D64 | hypothetical protein |  |  |  |  |  | 0.3157277248564641 | 2.212044256355642 | 1.449539214663182
51476787 | Q68D64 | hypothetical protein |  |  |  |  |  | 0.3157277248564641 | 2.212044256355642 | 1.449539214663182
Proteins measured in only one experiment (at a single time point)
35825 | PZP | pregnancy zone protein | 9.210956348820034 |  |  | 18.48609220112255 | 1.082025772983112 |  |  | 1.587059102
7161776 | K2C75 | [NAME] |  | 7.960737888823556 |  | 12.71749928
9910266 | KIF15 | [NAME] member 15 | 6.713427203052102 |  |  | 8.398712198582714
20809886 | Q8N6N5 | Tubulin, beta [NAME] | 6.538977284748684 |  |  | 7.948408280769385
9910242 | CCDC47 | coiled-coil domain containing 47 |  | 6.13781225342428 |  | 7.162560323
18418633 | HBB | mutant beta-globin | 6.056596747768971 |  |  | 6.825006638683959
579676 | AMBP | alpha-1-microglobulin; [NAME] |  | 5.875094862087916 |  | 6.593784076999999
6425032 | Q9UBV6 | beta-globin |  | 5.502623343493738 |  | 5.863937899999999
18088164 | ZN503 | ZNF503 protein | 5.51511792200208 |  |  | 5.751993416590448
56417672 | FA5 | coagulation factor V (proaccelerin, labile factor) |  | 5.435204789684353 |  | 5.740742764000001
55958670 | UBQL1 | ubiquilin 1 |  | 5.274165741739795 |  | 5.456846358999999 | 0.5247991409447577 |  |  | 1.272633075
12804349 | F203A | Chromosome 8 open reading frame 30A | 5.272300335693033 |  |  | 5.327293035398077 | 0.4763080848069166 | -1.16384476376241 |  | 0.9280574680232454
12803651 | TMOD1 | [NAME] | 5.154216746379212 |  |  | 5.132238962753155 | 3.502800555277019 |  |  | 4.141619241
7662238 | ACINU | apoptotic chromatin condensation inducer 1 | 5.123598117959327 |  |  | 5.082838888320515 | 1.867038615536078 |  |  | 2.166114452
4186185 | VIPAR | VPS33B-interacting protein | 5.122032566020053 |  |  | 5.080325844784014 | 3.702793163700656 |  |  | 4.483175454
6714707 | WDR5 | WD repeat-containing protein 5 | 4.816280021369574 |  |  | 4.612600251176379
50949334 | [NAME] | UPF0449 protein C19orf25 | 4.688326238895375 |  |  | 4.429880631063251
433308 | CAZA2 | capping protein alpha | 4.601757567184781 |  |  | 4.310382320480701 | 1.337563313814394 |  | -0.1670248307166203 | 1.305940586836549
52545651 | UBP10 | hypothetical protein |  | 4.393338751849136 |  | 4.134902501 | 0.1256943187078577 | -0.08391567659511141 | 0.7932873173705447 | 1.106041364966764
55958063 | Q5T985 | inter-alpha (globulin) inhibitor, H2 polypeptide |  | 4.260722262643601 |  | 3.965760212999999
51491229 | [NAME] | hypothetical protein |  | 4.19586583200006 |  | 3.885577845999999
47938109 | Q6IQ37 | DCTN1 protein | 4.023818005971236 |  |  | 3.591113232964256 | 0.8112240217595534 |  |  | 1.425582646
38648811 | OSBP1 | OSBP protein | 3.999430381246177 |  |  | 3.5635544270238 | 0.05521588982837981 |  |  | 1.056562889
13937895 | LSM3 | LSM3 homolog, U6 small nuclear RNA associated (S. cerevisiae) |  | 3.868907934728692 |  | 3.50538279 | -0.09322819163402468 | 0.2693221211020643 |  | 1.049020568785811
33188449 | SRPK2 | SFRS protein kinase 2 isoform a | 3.923192463492381 |  |  | 3.478759669251637
57209890 | REPS2 | RALBP1 associated Eps domain containing 2 |  |  | 6.386534638553114 | 3.402694724615901
32450708 | NJMU | Chromosome 17 open reading frame 75 | 3.833773346677265 |  |  | 3.381871852001496 | 1.560937693378762 |  |  | 1.918696443
55664564 | MKI67 | antigen identified by monoclonal antibody Ki-67 |  | 3.592955956503777 |  | 3.213599108
30851190 | CO6A1 | Collagen, type VI, alpha 1 |  | 3.592173611174764 |  | 3.212807402 | 1.851251115243959 |  |  | 2.152606368
50370288 | FA21A | LOC387680 protein |  | 3.526961071135514 |  | 3.147495713
7022576 | INT7 | unnamed protein product |  | 3.497742559228227 |  | 3.118665104
49119617 | Q6NSG7 | High-mobility group nucleosome binding domain 1 | 3.551203863724884 |  |  | 3.093084950198641
20521750 | ZC3H4 | KIAA1064 protein | 3.517824304656719 |  |  | 3.060642146411687 | -0.0610373130571538 |  |  | 1.008997323
6164624 | FBX7 | F-box protein Fbx7 |  | 3.395726004846562 |  | 3.020057914
55957287 | SMAD9 | MAD, mothers against decapentaplegic homolog 9 (Drosophila) |  |  | 5.563790813103861 | 2.907292489672716 |  | 0.3458513398997803 |  | 1.13274887
14329514 | GLRX3 | thioredoxin-like 3 | 3.339695804052369 |  |  | 2.893179390344031
48145699 | Q6IBL2 | [NAME] |  | 3.199733321916138 |  | 2.839279022
12232469 | RMD5A | required for meiotic nuclear division 5 homolog A | 3.269278904874163 |  |  | 2.829534346758223
56611149 | FA21A | Similar to KIAA0592 protein | 3.20388333495873 |  |  | 2.771682286394422
20380436 | [NAME] | Polymerase (RNA) II (DNA directed) polypeptide C, 33kDa | 3.193136718117017 |  |  | 2.762289123913348
903682 | Q53ZR1 | bumetanide-sensitive Na-K-Cl cotransporter | 3.192910776742966 |  |  | 2.762091980181968
4886449 | R3HC1 | hypothetical protein | 3.11034728004939 |  |  | 2.690985576938925 | -1.03551697831848 |  |  | 0.685799982
7662260 | KBTBB | kelch repeat and BTB (POZ) domain containing 11 | 3.064970889089283 |  |  | 2.652688462751995
38303981 | Q2TU73 | 1-acylglycerol-3-phosphate O-acyltransferase 6 (lysophosphatidic acid acyltransferase, zeta) |  | 2.975624832609344 |  | 2.645789532
57999533 | Q5H9Q2 | hypothetical protein | 3.007567310072772 |  |  | 2.605020434978601 | 0.4086916146081231 |  |  | 1.215410367
6503002 | DDX20 | DEAD box [NAME] helicase Gemin3 |  | 2.838933421080104 |  | 2.534306386
56204591 | IMA5 | KPNA5 |  | 2.717314556338079 |  | 2.439071393
57208456 | TRMT11 | tRNA methyltransferase 11 homolog | 2.793589738969373 |  |  | 2.434758331402752
5031717 | C43BP | alpha 3 type IV collagen binding protein isoform 1 |  | 2.696376459790073 |  | 2.423040496
7706367 | [NAME] | DNA replication complex GINS protein PSF2 | 2.738746756434325 |  |  | 2.392941221581753
54887378 | [NAME] | FLJ12716 protein | 2.730657479107593 |  |  | 2.386834324974683
7108340 | DHPS | deoxyhypusine synthase isoform c |  | 2.638188283966389 |  | 2.379040833
16924319 | Q8WVW5 | Unknown (protein for IMAGE:3538275) |  | 2.63149829768561 |  | 2.37403361 | 0.7798299983022184 |  |  | 1.407958924
52352803 | [NAME] | solute carrier family 30 (zinc transporter), member 1 |  | 2.594571742573594 |  | 2.34658439
21740087 | TRNT1 | hypothetical protein |  | 2.588663267240779 |  | 2.342221895999999
7020412 | Q9NX98 | unnamed protein product |  | 2.571375621738472 |  | 2.329504172
29792232 | TPM1 | TPM1 protein | 2.6363222857053 |  |  | 2.316757437377514 | 1.634734669172936 |  |  | 1.975629777
37787309 | PNCB | nicotinate phosphoribosyltransferase-like protein | 2.63592538160882 |  |  | 2.316466986633302 | 1.117802450987833 |  |  | 1.609717631
16418383 | NACC1 | transcriptional repressor [NAME] |  | 2.496761627875399 |  | 2.275401552 | -1.568767173248749 |  |  | 0.555179653
31874559 | [NAME] | hypothetical protein |  | 2.477375325089985 |  | 2.26155138
40788994 | TBRG4 | KIAA0948 protein |  | 2.476777657362948 |  | 2.26112573
15278126 | [NAME] | PPP1R7 protein | 2.55206423730939 |  |  | 2.255907696630983 | 0.8011818410516125 |  |  | 1.419921383
7243143 | COG1 | KIAA1381 protein |  | 2.438816376547078 |  | 2.234253773 | -0.5096003262098057 |  |  | 0.844694003
5138999 | NDUS3 | NADH-Ubiquinone reductase |  | 2.412983132657851 |  | 2.216149829 |  | 3.118636417800116 |  | 2.816065791
57222570 | CDAN1 | codanin 1 | 2.47517967889725 |  |  | 2.201778590580491
55962537 | KCC1D | calcium\/calmodulin-dependent protein kinase ID | 2.471493657928064 |  |  | 2.199216395446765
55249573 | CHMP7 | CHMP family, member 7 |  | 2.337568934773198 |  | 2.164134393
7717444 | OFUT2 | human mRNA for KIAA0958 protein | 2.386483703829509 |  |  | 2.140945301641477
33636762 | ZFYVE19 | zinc finger, FYVE domain containing 19 | 2.355565634600998 |  |  | 2.120137201371572 | 0.5955716969260156 |  |  | 1.308826393
32425304 | GET4 | Chromosome 7 open reading frame 20 |  | 2.242888744570796 |  | 2.100555689 | -0.2351842733417409 |  |  | 0.94172061
27482992 | NIPS2 | PREDICTED: similar to 60S ribosomal protein L29 (Cell surface heparin binding protein HIP) |  |  | 3.767781297939243 | 2.062141095941795 |  |  | 1.682715543616412 | 1.618586540007522
3309539 | LIPB1 | [NAME] | 2.259994804886206 |  |  | 2.057087392424461
6841514 | [NAME] | HSPC146 | 2.249031313266112 |  |  | 2.049975529339608
55741709 | RBM25 | RNA binding motif protein 25 | 2.220723628939605 |  |  | 2.03172622583379
46852398 | BL1S2 | biogenesis of lysosome-related organelles complex-1, subunit 2 isoform 1 | 2.203644707399629 |  |  | 2.02079451307084
55960950 | LYSM1 | novel protein ([NAME]) |  | 2.077005649542984 |  | 1.993633336
5924008 | ENPP4 | ENPP4 |  | 2.068968192391355 |  | 1.988593207 | 1.50986389274436 |  |  | 1.880257271
57014047 | Q5I6Y4 | lamin A/C transcript variant 1 | 2.145166487720107 |  |  | 1.983807882331308 | -0.2387954195009912 |  |  | 0.940374089
31565806 | D9YZV7 | Tropomyosin 1 (alpha) |  | 2.038711151771255 |  | 1.969733625
50592996 | TBB3 | tubulin, beta, 4 | 2.110622615368929 |  |  | 1.962278238472087
55956899 | K1C9 | keratin 9 | 2.035988121213089 |  |  | 1.916556334032203
3273228 | ACADV | very-long-chain acyl-CoA dehydrogenase | 1.978036702315338 |  |  | 1.881790699308557 | 0.8503893594444053 |  |  | 1.447878554
32187321 | HSBP1 | NPC-A-13 | 1.971831136585039 |  |  | 1.878105502617928 | 2.576241507221835 |  |  | 2.868956779
2769254 | ADDA | NIPSNAP2 protein |  |  | 2.794350320258022 | 1.711861250194559
16359088 | Q96B43 | Similar to methionyl aminopeptidase 2 | 1.669826939855233 |  |  | 1.707215973922727 | 4.695537135915425 |  |  | 6.643872338
29826321 | BRE | adducin 1 (alpha) isoform b |  |  | 2.49879687070517 | 1.617785402076821 | 0.2794090110086879 |  |  | 1.154716693
12654817 | DHAK | Brain and reproductive organ-expressed (TNFRSF1A modulator) |  |  | 2.395206718995474 | 1.58605072196553
10435998 | HMGB3 | unnamed protein product |  |  | 2.319241568750131 | 1.563175245299204
2285963 | TACO1 | high mobility group protein 2a |  |  | 2.106518534853135 | 1.500858081838985
31657231 | TTC5 | Tetratricopeptide repeat domain 5 | 1.15137316256337 |  |  | 1.449314178733367 | 3.103004678494528 |  |  | 3.53485513
3603418 | 2AAB | protein phosphatase 2A regulatory subunit A, beta isoform | 1.236438926647796 | 0.6669301911096686 |  | 1.379768830382194 | 3.67393468975411 |  |  | 4.432203054
55664512 | PIN1P1 | protein (peptidyl-prolyl cis\/trans isomerase) NIMA-interacting 1-like | 0.9325975827901342 |  |  | 1.352536628548258 | 3.56395613650067 |  |  | 4.243205627
4759068 | SCO1 | cytochrome oxidase deficient homolog 1 |  | 0.7917982046504255 |  | 1.330022788 |  | 7.122127839742777 |  | 10.48816492
14043517 | [NAME] | Coiled-coil domain containing 44 |  |  | 1.470928447568427 | 1.329075676617408 |  |  | 2.136092855712127 | 1.834482536357316
47115169 | Q6LEU2 | ATP1B1 |  | 0.787979187788969 |  | 1.328424052 | 2.066636034813166 |  |  | 2.344385142
49168580 | Q6FHZ0 | MDH2 | 1.418744328925754 |  | 0.4510790615978497 | 1.313238702018846 | 2.08617158831168 |  |  | 2.362602831999999
56204494 | CA055 | novel protein ([NAME]) | 0.7047271812149479 |  |  | 1.258600280019432 | 2.91139621391138 |  |  | 3.276414446
55959864 | NICA | nicastrin | 2.019423176120873 | -0.8496589260778566 |  | 1.229695761451025 | 2.15350483361926 |  |  | 2.426485538
825689 | ECI1 | dodecenoyl-CoA delta-isomerase | 0.9921628224999933 | -0.1777159199192169 |  | 1.162215084819884 | 2.383319504279603 |  |  | 2.657817636
5834565 | [NAME] | OTTHUMP00000028508 | -0.3027215939637325 | 1.013052445352104 |  | 1.142613694370405 | 2.129815714426253 |  |  | 2.403815794
55859554 | CDC26 | cell division cycle 26 | -1.387166440071146 | 2.044461368316001 |  | 1.132528074913146 | 2.011488275624815 |  |  | 2.293712085
28839294 | Q86WV7 | FLJ31795 protein | 0.2822914946964969 |  |  | 1.10137314423664 | 3.167298416449668 |  |  | 3.626064754999999
46411172 | MBNL1 | muscleblind-like 1 isoform f | 0.1988272741296005 |  |  | 1.072714489071683 | 2.356270020494422 |  |  | 2.629483139
51100974 | MYO1D | [NAME] ID | -0.4136398541894404 | 0.6359626239257234 |  | 1.05804112757665 | 5.204573002856398 |  |  | 8.128647751000003
51451152 | Q5S971 | cytochrome c oxidase subunit II |  | 0.02436440255568918 |  | 1.044460825 |  | 2.882281629021199 |  | 2.605728883
6331231 | MAVS | KIAA1271 protein | 0.8080484494346649 | -0.8437981701869279 |  | 1.016494676783319 | 2.056804269773647 |  |  | 2.335269832
386134 | PPAC | [NAME] acid phosphatase alpha; HAAP alpha | 0.6393277161971405 | -0.8205699667033824 |  | 0.9933913368213381 | 2.228517087420604 |  |  | 2.49968987
14602986 | ACTC | Actin, alpha, cardiac muscle | -0.1982046380694187 |  |  | 0.9462718313510738 | 3.652884554942045 |  |  | 4.395388355
32699045 | PDDC1 | hypothetical protein LOC347862 |  | 0.08397113491322575 | -0.9341386109559863 | 0.9449722400195266 |  | 2.139666193442304 |  | 2.041751124
7717310 | UBP16 | human ubiquitin processing protease, EC 3.1.2.15 | -0.5509725658941854 |  |  | 0.8464867992995061 | 1.973225831025252 |  |  | 2.25919928
20853684 | RLA0L | BLOCK 23 |  | -0.7024778491799137 |  | 0.8307631029999999 |  | 5.751378186223667 |  | 6.686151673
34732687 | IQGA2 | testis specific IQ motif containing GTPase activating protein 2 | -0.6161002589944478 |  |  | 0.829249876823016 | 3.964754772021752 |  |  | 4.973535099
6466450 | COMT | catechol-O-methyltransferase isoform S-COMT | -1.068274548177664 |  |  | 0.7188731752118828 | 2.801787951234616 |  |  | 3.137162268
4324472 | RM12 | 5c5-2 protein |  | -1.431998634493469 |  | 0.6602309569999999 | 3.6627829753587 |  |  | 4.412661513999999
5902018 | TPPP | brain-specific protein p25 alpha | -1.369269600638712 |  |  | 0.6536709756060359 | 2.813044511616128 |  |  | 3.15118615
514268 | [NAME] | proto-oncogene tyrosine-protein kinase | -5.123896354776117 |  |  | 0.1996491114159499 | 3.136424366484576 |  |  | 3.581975571
55958476 | Q5T765 | interferon-induced protein with tetratricopeptide repeats 4 |  |  |  |  |  |  | 17.90456478639129 | 142.813605109528
22328092 | CO1A1 | Collagen, type I, alpha 1 |  |  |  |  | 12.10361483481112 |  |  | 125.0933822
36575 | VTNC | unnamed protein product |  |  |  |  | 9.841211566182377 |  |  | 51.03998043
22902225 | UBP46 | Ubiquitin specific peptidase 46 |  |  |  |  | 8.292088800181254 |  |  | 27.62682404000001
6003532 | [NAME] | hemoglobin beta subunit variant |  |  |  |  | 6.246776115137111 |  |  | 12.28471211
1777782 | IFIT3 | ISG family member |  |  |  |  | 5.62114530788173 |  |  | 9.587465454999998
55665493 | PAIRB | PAI-1 mRNA-binding protein (PAI-RBP1) |  |  |  |  | 5.61835040457334 |  |  | 9.576853710000002
55957065 | APOL2 | OTTHUMP00000028936 |  |  |  |  | 4.219497404471001 |  |  | 5.501769190000001
47132620 | K22E | keratin 2 |  |  |  |  | 4.213086188806066 |  |  | 5.487810396
28193112 | CCNK | unnamed protein product |  |  |  |  | 4.020983526167828 |  |  | 5.085589090999998
33946299 | PRPF39 | PRP39 pre-mRNA processing factor 39 homolog (S. cerevisiae) |  |  |  |  | 4.008576421695103 |  |  | 5.060648814
7023218 | NU133 | unnamed protein product |  |  |  |  | 3.902989596518486 |  |  | 4.853291501
808869 | GOGB1 | golgi antigen gcp372 |  |  |  |  | 3.716380469493509 |  |  | 4.507377125
4680681 | SNUT2 | CGI-21 protein |  |  |  |  | 3.545958148782559 |  |  | 4.21305287
5759309 | UBAC1 | putative glialblastoma cell differentiation-related protein |  |  |  |  |  | 4.336802667615403 |  | 4.201473547
39644662 | [NAME] | HSP90AB1 protein |  |  |  |  | 3.529640852168084 |  |  | 4.185901074
15080568 | CENPH | Centromere protein H |  |  |  |  | 3.520333889237103 |  |  | 4.170492833
780806 | PAK1 | p21-activated protein kinase |  |  |  |  | 3.394613696363772 |  |  | 3.967828765
21594922 | RBM42 | MGC10433 protein |  |  |  |  | 3.254221653051192 |  |  | 3.753130542
7243023 | NUFP2 | [NAME] |  |  |  |  | 3.153232221717516 |  |  | 3.605910854
54792780 | DDHD2 | DDHD domain containing 2 |  |  |  |  | 3.129490631970082 |  |  | 3.572147913
7019933 | Q9NXS9 | unnamed protein product |  |  |  |  | 3.082634462970117 |  |  | 3.506438512
5817221 | Q9UFX5 | hypothetical protein |  |  |  |  |  | 3.777879929871562 |  | 3.496850589
4405795 | DDX58 | RNA helicase |  |  |  |  | 3.075522194940866 |  |  | 3.496570738
55665950 | TR150 | thyroid hormone receptor associated protein 3 |  |  |  |  | 2.87157050361655 |  |  | 3.22511687
13559033 | LSM14B | C20orf40, [NAME] homolog B (S. cerevisiae) |  |  |  |  | 2.827562791578833 |  |  | 3.169366225
49257476 | B4DUT1 | SMYD family member 5 |  |  |  |  | 2.826334012301781 |  |  | 3.167823469
39652628 | F120A | hypothetical protein [NAME] |  |  |  |  |  | 3.458136946027185 |  | 3.148248764
48145949 | UB2D3 | UBE2D3 |  |  |  |  | 2.62600757574311 |  |  | 2.926091882000001
30846 | DMD | unnamed protein product |  |  |  |  |  |  | 3.82525448344833 | 2.924893596538932
4884200 | Q9UG85 | hypothetical protein |  |  |  |  |  | 3.13538338266941 |  | 2.831597879999999
23958561 | F1T0J8 | REST corepressor 2 |  |  |  |  | 2.466992087393987 |  |  | 2.747412739
11527773 | OAS3 | 2'-5' oligoadenylate synthetase 3 |  |  |  |  |  |  | 3.483047182664141 | 2.661129707307266
7770157 | [NAME] | PRO2014 |  |  |  |  | 2.345494330549232 |  |  | 2.618279856
47132587 | PRDBP | protein kinase C, delta binding protein |  |  |  |  | 2.042960373568157 |  |  | 2.322494816
8744934 | XIAP | baculoviral IAP repeat-containing 4 |  |  |  |  | 2.02152507653408 |  |  | 2.302852265
262476 | CGL | [NAME]; cystathionase |  |  |  |  | 2.012604193442315 |  |  | 2.294726519
7542837 | ACADM | medium-chain acyl-CoA dehydrogenase |  |  |  |  |  | 2.478982339308984 |  | 2.282457753
4103448 | [NAME] | NAD+-specific isocitrate dehydrogenase beta subunit isoform B |  |  |  |  |  | 2.178860409445933 |  | 2.06820438
55665426 | B1AKJ5 | [NAME] (N-arginine dibasic convertase) |  |  |  |  |  |  | 2.519182758222675 | 2.039205678652727
12804861 | SMAD1 | SMAD, mothers against DPP homolog 1 (Drosophila) |  |  |  |  |  |  | 2.263698313831056 | 1.900283786480389
17391372 | [NAME] | MTAP protein |  |  |  |  |  |  | 2.018093465318594 | 1.775664219651624
a Protein is included if at least half of the biologic z-score values are ≥1.960σ (indicated by red bolding) at any time point and there are no major disagreements between biological replicates of the same time point.
b L/H ratio refers to the geometric mean of all log2 L/H values for each given gi number, expressed as relative protein quantity in infected cultures.