Spreadsheet: 84c098f8-f1a2-4e84-849c-c39c2a1b7ae3
Sheet: Sheet1

Table S1. Description of 351 samples | Unnamed: 1 | Unnamed: 2 | Unnamed: 3 | Unnamed: 4 | Unnamed: 5 | Unnamed: 6 | Unnamed: 7 | Unnamed: 8 | Unnamed: 9 | Unnamed: 10 | Unnamed: 11 | Unnamed: 12 | Unnamed: 13 | Unnamed: 14 | Unnamed: 15 | Unnamed: 16 | Unnamed: 17
 |  |  |  |  |  |  |  |  | Genotypes |  |  |  | VINOtypes
Name | Alias | Reference for the sample | Reference for the genotypes | Included in [NAME] and S1 | Sex | Type | CEL ID | Genetic Distance | AA | AB | BB | N | AA | AB | BB | V | N
129P1/ReJ | 129P1/ReJ | 1 | 1 | yes | Male | classical laboratory strain | SNP_mDIV_B3-387_022709 | 0.2294766159475495 | 405575 | 5500 | 114235 | 1053 | 405563 | 5375 | 114199 | 441 | 785
129P3/J | 129P3/J | 1 | 1 | yes | Male | classical laboratory strain | SNP_mDIV_B4-388_012709 | 0.2347258450916953 | 402812 | 6233 | 113404 | 3914 | 402800 | 6087 | 113381 | 438 | 3657
129S1SvlmJ | 129S1SvlmJ | 1 | 1 | yes | Male | classical laboratory strain | SNP_mDIV_A1-1_081308 | 0.2261158174111783 | 407344 | 5466 | 112534 | 1019 | 407334 | 5360 | 112515 | 358 | 796
129S6 | 129S6 | 1 | 1 | yes | Male | classical laboratory strain | SNP_mDIV_A8-199_091708 | 0.2352653966939166 | 402528 | 5846 | 111580 | 6409 | 402506 | 5723 | 111554 | 579 | 6001
129T2/SvEmsJ | 129T2/SvEmsJ | 1 | 1 | yes | Male | classical laboratory strain | SNP_mDIV_B5-389_012709 | 0.2280175468260497 | 406343 | 5730 | 111735 | 2555 | 406332 | 5611 | 111717 | 442 | 2261
129X1/SvJ | 129X1/SvJ | 1 | 1 | yes | Male | classical laboratory strain | SNP_mDIV_D6-254_111308 | 0.2219266931756222 | 409549 | 5500 | 109723 | 1591 | 409541 | 5381 | 109692 | 499 | 1250
A/HeJ | A/HeJ | 6 | 5 | yes | Male | classical laboratory strain | SNP_mDIV_B6-390_012709 | 0.2670286475303165 | 385809 | 9550 | 103206 | 27798 | 385781 | 9424 | 103189 | 594 | 27375
A/J | A/J | 1 | 1 | yes | Male | classical laboratory strain | SNP_mDIV_A2-2_081308 | 0.2213738427663039 | 409840 | 4992 | 109124 | 2407 | 409830 | 4913 | 109114 | 259 | 2247
A/WySnJ | A/WySnJ | 1 | 1 | yes | Male | classical laboratory strain | SNP_mDIV_B7-391_012709 | 0.2183474142369429 | 411433 | 4804 | 109494 | 632 | 411418 | 4726 | 109482 | 273 | 464
AEJ/GnLeJ | AEJ/GnLeJ | 1 | 1 | yes | Male | classical laboratory strain | SNP_mDIV_B4-118_091708 | 0.1081420996536611 | 469441 | 4610 | 51121 | 1191 | 469431 | 4495 | 51103 | 590 | 744
AEJ/GnRk | AEJ/GnRk | 1 | 1 | yes | Male | classical laboratory strain | SNP_mDIV_B8-392_012709 | 0.1091794066072274 | 468895 | 4641 | 51521 | 1306 | 468885 | 4525 | 51509 | 480 | 964
AKR/J | AKR/J | 1 | 1 | yes | Male | classical laboratory strain | SNP_mDIV_A3-3_081308 | 0.2117569054055851 | 414902 | 4821 | 105534 | 1106 | 414889 | 4741 | 105513 | 449 | 771
ALR/LtJ | ALR/LtJ | 1 | 1 | yes | Male | classical laboratory strain | SNP_mDIV_A6-119_090908 | 0.2139607077245171 | 413742 | 5500 | 104518 | 2603 | 413726 | 5333 | 104479 | 776 | 2049
ALS/LtJ | ALS/LtJ | 1 | 1 | yes | Male | classical laboratory strain | SNP_mDIV_C9-120_090908 | 0.2118214996114849 | 414868 | 5372 | 104019 | 2104 | 414854 | 5208 | 103987 | 727 | 1587
ATEB/LeJ | ATEB/LeJ | 6 | 5 | yes | Male | classical laboratory strain | SNP_mDIV_C10-121_090908 | 0.2400358687825702 | 400017 | 7449 | 100450 | 18447 | 399998 | 7381 | 100439 | 297 | 18248
BALB/cByJ | BALB/cByJ | 1 | 1 | yes | Male | classical laboratory strain | SNP_mDIV_A4-4_081308 | 0.1991287381521878 | 421549 | 4567 | 98630 | 1617 | 421534 | 4500 | 98617 | 284 | 1428
BALB/cJ | BALB/cJ | 1 | 1 | yes | Male | classical laboratory strain | SNP_mDIV_D5-253_111308 | 0.1986214836529163 | 421816 | 4630 | 98571 | 1346 | 421805 | 4565 | 98557 | 245 | 1191
BDP/J | BDP/J | 1 | 1 | yes | Male | classical laboratory strain | SNP_mDIV_B9-393_012709 | 0.2080275399296683 | 416865 | 5253 | 102275 | 1970 | 416849 | 4975 | 102231 | 1120 | 1188
C57BLKS/J | BKs #167 | 1 | 1 | yes | Male | classical laboratory strain | SNP_mDIV_D2-SNP09_024_022709 | 0.07529594595364797 | 486730 | 4370 | 34391 | 872 | 486723 | 4322 | 34384 | 235 | 699
BPH/2J | BPH/2J | 1 | 1 | yes | Male | classical laboratory strain | SNP_mDIV_B5-123_091708 | 0.1770565180303327 | 433167 | 4679 | 87839 | 678 | 433161 | 4571 | 87821 | 414 | 396
BPL/1J | BPL/1J | 1 | 1 | yes | Male | classical laboratory strain | SNP_mDIV_B3-316_120908 | 0.2066938595607974 | 417567 | 6098 | 96239 | 6459 | 417549 | 5981 | 96217 | 527 | 6089
BPN/3J | BPN/3J | 1 | 1 | yes | Male | classical laboratory strain | SNP_mDIV_B6-124_091708 | 0.188237015139742 | 427282 | 5943 | 87908 | 5230 | 427271 | 5824 | 87897 | 502 | 4869
BTBRT+tf/J | BTBRT+tf/J | 1 | 1 | yes | Male | classical laboratory strain | SNP_mDIV_A5-5_081308 | 0.1953841740395886 | 423520 | 4995 | 96821 | 1027 | 423509 | 4908 | 96792 | 482 | 672
BUB/BnJ | BUB/BnJ | 1 | 1 | yes | Male | classical laboratory strain | SNP_mDIV_C11-125_090908 | 0.2139816058499553 | 413731 | 5416 | 105109 | 2107 | 413719 | 5209 | 105080 | 966 | 1389
BXSB/MpJ | BXSB/MpJ | 1 | 1 | yes | Male | classical laboratory strain | SNP_mDIV_B10-394_012709 | 0.1177951337765002 | 464360 | 4648 | 56507 | 848 | 464347 | 4565 | 56495 | 272 | 684
C3H/HeJ | C3H/HeJ | 1 | 1 | yes | Male | classical laboratory strain | SNP_mDIV_A6-6_081308 | 0.2178287607601598 | 411706 | 4555 | 109225 | 877 | 411695 | 4487 | 109212 | 258 | 711
C3HeB/FeJ | C3HeB/FeJ | 1 | 1 | yes | Male | classical laboratory strain | SNP_mDIV_D1-126_090908 | 0.2179085536027419 | 411664 | 4472 | 109169 | 1058 | 411655 | 4409 | 109160 | 374 | 765
C57BL/10J | C57BL/10J | 1 | 1 | yes | Male | classical laboratory strain | SNP_mDIV_B8-85_090908 | 0.02609795901307654 | 512626 | 4503 | 7846 | 1388 | 512615 | 4468 | 7843 | 135 | 1302
C57BL/6NCrl | C57BL/6CR-male ep1 | 1 | 1 | yes | Male | classical laboratory strain | SNP_mDIV_A8-381_012709 | 0.009829718274270816 | 521189 | 4124 | 413 | 637 | 521179 | 4091 | 413 | 84 | 596
C57BL/6J | C57BL/6J | 1 | 1 | yes | Male | classical laboratory strain | SNP_mDIV_A7-7_081308 | 0.009208473999882227 | 521516 | 4191 | 280 | 376 | 521511 | 4166 | 280 | 40 | 366
C57BL/6J | C57BL/6J F | 1 | 1 | yes | Female | classical laboratory strain | SNP_mDIV_A1-SNP08_001_103008 | 0.009284467183293676 | 521476 | 4131 | 269 | 487 | 521467 | 4109 | 269 | 37 | 481
C57BL/6J | C57BL/6J F | 1 | 1 | yes | Female | classical laboratory strain | SNP_mDIV_A2-SNP08_001_103008 | 0.01247998054574506 | 519794 | 4482 | 285 | 1802 | 519786 | 4458 | 285 | 42 | 1792
C57BL/6J | C57BL/6J F | 1 | 1 | yes | Female | classical laboratory strain | SNP_mDIV_A3-SNP08_001_103008 | 0.0116687533128278 | 520221 | 4218 | 276 | 1648 | 520214 | 4197 | 275 | 35 | 1642
C57BL/6J | C57BL/6J M | 1 | 1 | yes | Male | classical laboratory strain | SNP_mDIV_A4-SNP08_002_103008 | 0.008659423249734455 | 521805 | 4073 | 272 | 213 | 521800 | 4049 | 272 | 34 | 208
C57BL/6J | C57BL/6J M | 1 | 1 | yes | Male | classical laboratory strain | SNP_mDIV_A6-SNP08_002_103008 | 0.009618837190303986 | 521300 | 4208 | 284 | 571 | 521292 | 4183 | 284 | 36 | 568
C57BL/6J | C57BL/6J M | 1 | 1 | yes | Male | classical laboratory strain | SNP_mDIV_A5-SNP08_002_103008 | 0.01022678265759558 | 520980 | 4249 | 283 | 851 | 520973 | 4224 | 283 | 37 | 846
C57BL/6NCr | C57BL/6NCI-male ep11 | 1 | 1 | yes | Male | classical laboratory strain | SNP_mDIV_B1-385_012709 | 0.00915337894190893 | 521545 | 4078 | 408 | 332 | 521531 | 4050 | 408 | 62 | 312
C57BL/6NCr | C57BL/6NCI-male ep12 | 1 | 1 | yes | Male | classical laboratory strain | SNP_mDIV_A9-382_012709 | 0.01028947703391003 | 520947 | 4119 | 409 | 888 | 520935 | 4091 | 409 | 85 | 843
C57BL/6NJ | C57BL/6NJ F | 6 | 5 | yes | Female | classical laboratory strain | SNP_mDIV_A9-SNP08_003_103008 | 0.00925596973951437 | 521491 | 4080 | 405 | 387 | 521482 | 4053 | 405 | 53 | 370
C57BL/6NJ | C57BL/6NJ F | 6 | 5 | yes | Female | classical laboratory strain | SNP_mDIV_A8-SNP08_003_103008 | 0.01016598811086644 | 521012 | 4268 | 414 | 669 | 521003 | 4233 | 414 | 62 | 651
C57BL/6NJ | C57BL/6NJ F | 6 | 5 | yes | Female | classical laboratory strain | SNP_mDIV_A7-SNP08_003_103008 | 0.01014319015584297 | 521024 | 4186 | 417 | 736 | 521014 | 4158 | 417 | 61 | 713
C57BL/6NJ | C57BL/6NJ M | 6 | 5 | yes | Male | classical laboratory strain | SNP_mDIV_A10-SNP08_004_103008 | 0.009425054572604785 | 521402 | 4152 | 424 | 385 | 521397 | 4126 | 424 | 44 | 372
C57BL/6NJ | C57BL/6NJ M | 6 | 5 | yes | Male | classical laboratory strain | SNP_mDIV_B1-SNP08_004_103008_4 | 0.009018491041353549 | 521616 | 4072 | 417 | 258 | 521606 | 4046 | 417 | 49 | 245
C57BL/6NJ | C57BL/6NJ M | 6 | 5 | yes | Male | classical laboratory strain | SNP_mDIV_A11-SNP08_004_103008 | 0.01400174404355925 | 518993 | 4238 | 409 | 2723 | 518986 | 4214 | 409 | 46 | 2708
C57BL/6NTac | C57BL/6Tc-male ep13 | 1 | 1 | yes | Male | classical laboratory strain | SNP_mDIV_A10-383_012709 | 0.0158768758442368 | 518006 | 4933 | 460 | 2964 | 517998 | 4905 | 460 | 60 | 2940
C57BL/6NTac | C57BL/6Tc-male ep14 | 1 | 1 | yes | Male | classical laboratory strain | SNP_mDIV_A11-384_012709 | 0.01198032536481475 | 520057 | 4186 | 408 | 1712 | 520048 | 4157 | 408 | 61 | 1689
C57BLKS/J | C57BLKS/J | 1 | 1 | yes | Male | classical laboratory strain | SNP_mDIV_B9-86_090908 | 0.1143222452945971 | 466188 | 5005 | 49935 | 5235 | 466170 | 4879 | 49911 | 705 | 4698
C57BR/cdJ | C57BR/cdJ | 1 | 1 | yes | Male | classical laboratory strain | SNP_mDIV_B10-87_090908 | 0.1131975461801077 | 466780 | 5621 | 50689 | 3273 | 466764 | 5477 | 50667 | 668 | 2787
C57L/J | C57L/J | 1 | 1 | yes | Male | classical laboratory strain | SNP_mDIV_B11-88_090908 | 0.1092478004722977 | 468859 | 4810 | 50241 | 2453 | 468841 | 4677 | 50214 | 702 | 1929
C58/J | C58/J | 1 | 1 | yes | Male | classical laboratory strain | SNP_mDIV_C1-89_090908 | 0.1220146552854209 | 462139 | 5060 | 55234 | 3930 | 462118 | 4929 | 55214 | 680 | 3422
CBA/CaJ | CBA/CaJ | 1 | 1 | yes | Male | classical laboratory strain | SNP_mDIV_B4-15_081308 | 0.2149600180863777 | 413216 | 4624 | 107204 | 1319 | 413197 | 4527 | 107186 | 481 | 972
CBA/J | CBA/J | 1 | 1 | yes | Male | classical laboratory strain | SNP_mDIV_D8-256_111308 | 0.2210698700326581 | 410000 | 4761 | 109516 | 2086 | 409987 | 4670 | 109502 | 411 | 1793
CE/J | CE/J | 1 | 1 | yes | Male | classical laboratory strain | SNP_mDIV_D2-128_090908 | 0.2293987229345528 | 405616 | 5862 | 111187 | 3698 | 405592 | 5498 | 111140 | 1888 | 2245
CHMU/LeJ | CHMU/LeJ | 1 | 1 | yes | Male | classical laboratory strain | SNP_mDIV_D3-129_090908 | 0.1131462507813049 | 466807 | 4895 | 49363 | 5298 | 466799 | 4839 | 49354 | 214 | 5157
DBA/1J | DBA/1J | 1 | 1 | yes | Male | classical laboratory strain | SNP_mDIV_B7-18_081308 | 0.2218051040821638 | 409613 | 4730 | 109135 | 2885 | 409585 | 4630 | 109113 | 385 | 2650
DBA/1LacJ | DBA/1LacJ | 1 | 1 | yes | Male | classical laboratory strain | SNP_mDIV_C3-398_012709 | 0.2191928384023953 | 410988 | 4450 | 109224 | 1701 | 410964 | 4349 | 109205 | 353 | 1492
DBA/2DeJ | DBA/2DeJ | 1 | 1 | yes | Male | classical laboratory strain | SNP_mDIV_C4-399_012709 | 0.243081295607784 | 398414 | 6591 | 107671 | 13687 | 398388 | 6488 | 107659 | 390 | 13438
DBA/2HaSmnJ | DBA/2HaSmnJ | 1 | 1 | yes | Male | classical laboratory strain | SNP_mDIV_C5-400_012709 | 0.2269365437920219 | 406912 | 5602 | 107263 | 6586 | 406893 | 5502 | 107249 | 340 | 6379
DBA/2J | DBA/2J | 1 | 1 | yes | Male | classical laboratory strain | SNP_mDIV_B8-19_081308 | 0.220439126610343 | 410332 | 4391 | 111089 | 551 | 410311 | 4300 | 111079 | 210 | 463
DDK/Pas | DDK | 1 | 1 | yes | Female | classical laboratory strain | SNP_mDIV_A8-56_082108 | 0.2131399813436735 | 414174 | 5447 | 103973 | 2769 | 414157 | 5215 | 103924 | 1041 | 2026
DDY/JclSidSeyFrkJ | DDY/JclSidSeyfrkJ | 1 | 1 | yes | Male | classical laboratory strain | SNP_mDIV_B9-20_081308 | 0.2153304848555084 | 413021 | 5858 | 103969 | 3515 | 412990 | 5600 | 103923 | 1190 | 2660
DLS/LeJ | DLS/LeJ | 1 | 1 | yes | Male | classical laboratory strain | SNP_mDIV_D4-130_090908 | 0.1725330237877662 | 435548 | 4840 | 84921 | 1054 | 435537 | 4750 | 84907 | 382 | 787
EL/SuzSeyFrkJ | EL/SuzSeyfrkJ | 1 | 1 | yes | Male | classical laboratory strain | SNP_mDIV_D5-131_090908 | 0.221275051627869 | 409892 | 5442 | 106071 | 4958 | 409865 | 5253 | 106040 | 981 | 4224
FVB/NJ | FVB/NJ | 1 | 1 | yes | Male | classical laboratory strain | SNP_mDIV_B10-21_081308 | 0.2121045742196925 | 414719 | 4879 | 105672 | 1093 | 414700 | 4760 | 105634 | 619 | 650
HPG/BmJ | HPG/BmJ | 1 | 1 | yes | Male | classical laboratory strain | SNP_mDIV_B8-132_091708 | 0.2200458618861888 | 410539 | 4730 | 110273 | 821 | 410526 | 4642 | 110249 | 387 | 559
I/LnJ | I/LnJ | 1 | 1 | yes | Male | classical laboratory strain | SNP_mDIV_B2-90_091708 | 0.2328279153359943 | 403811 | 6029 | 109552 | 6971 | 403792 | 5747 | 109506 | 1210 | 6108
IBWSP2 | IBWSP2 | 1 | 1 | yes | Female | classical laboratory strain | SNP_mDIV_A11-431_022709 | 0.1934178504188174 | 424555 | 5082 | 95127 | 1599 | 424544 | 4986 | 95104 | 426 | 1303
IBWSR2 | IBWSR2 | 1 | 1 | yes | Male | classical laboratory strain | SNP_mDIV_A9-429_022709 | 0.2009069786440156 | 420613 | 5057 | 94342 | 6351 | 420595 | 4962 | 94321 | 475 | 6010
ICOLD2 | ICOLD2 | 1 | 1 | yes | Male | classical laboratory strain | SNP_mDIV_A8-427_022709 | 0.1782173139069425 | 432556 | 5315 | 87460 | 1032 | 432543 | 5198 | 87439 | 468 | 715
IHOT1 | IHOT1 | 1 | 1 | yes | Male | classical laboratory strain | SNP_mDIV_A6-424_022709 | 0.1877829558688585 | 427521 | 4644 | 93457 | 741 | 427508 | 4542 | 93429 | 453 | 431
IHOT2 | IHOT2 | 1 | 1 | yes | Male | classical laboratory strain | SNP_mDIV_A7-425_022709 | 0.1816161090350196 | 430767 | 4778 | 89631 | 1187 | 430753 | 4674 | 89610 | 510 | 816
ILS | ILS male spleen A3 | 1 | 1 | yes | Male | classical laboratory strain | SNP_mDIV_B2-433_022709 | 0.1995334018538537 | 421336 | 4736 | 98479 | 1812 | 421324 | 4638 | 98446 | 495 | 1460
ISS | ISS male spleen A1 | 1 | 1 | yes | Male | classical laboratory strain | SNP_mDIV_B1-432_022709 | 0.1722575484978998 | 435693 | 4590 | 85074 | 1006 | 435678 | 4489 | 85054 | 491 | 651
JE/LeJ | JE/LeJ | 1 | 1 | yes | Male | classical laboratory strain | SNP_mDIV_C2-91_090908 | 0.1165545450573083 | 465013 | 4593 | 55579 | 1178 | 465003 | 4499 | 55569 | 436 | 856
KK/HIJ | KK/HIJ | 1 | 1 | yes | Male | classical laboratory strain | SNP_mDIV_B11-22_081308 | 0.2307362029625942 | 404912 | 5550 | 113361 | 2540 | 404885 | 5388 | 113308 | 993 | 1789
LG/J | LG/J | 1 | 1 | yes | Male | classical laboratory strain | SNP_mDIV_C3-92_090908 | 0.21016294838353 | 415741 | 5093 | 103684 | 1845 | 415724 | 4890 | 103652 | 1016 | 1081
LP/J | LP/J | 1 | 1 | yes | Male | classical laboratory strain | SNP_mDIV_C4-93_090908 | 0.2291992408280977 | 405721 | 5372 | 114204 | 1066 | 405705 | 5244 | 114181 | 526 | 707
LT/SvEiJ | LT/SvEiJ | 1 | 1 | yes | Male | classical laboratory strain | SNP_mDIV_C6-401_012709 | 0.1505272977013962 | 447131 | 4689 | 72992 | 1551 | 447111 | 4570 | 72971 | 624 | 1087
MA/MyJ | MA/MyJ | 6 | 5 | yes | Male | classical laboratory strain | SNP_mDIV_D6-133_090908 | 0.2194531150555795 | 410851 | 7272 | 92815 | 15425 | 410838 | 7094 | 92795 | 823 | 14813
MRL/MpJ | MRL/MpJ | 1 | 1 | yes | Male | classical laboratory strain | SNP_mDIV_D7-134_090908 | 0.2173936997851292 | 411935 | 5831 | 104009 | 4588 | 411926 | 5679 | 103987 | 704 | 4067
NOD/ShiLtJ | NOD/LtJ | 1 | 1 | yes | Male | classical laboratory strain | SNP_mDIV_C6-30_081308 | 0.216960538639684 | 412163 | 5439 | 107322 | 1439 | 412139 | 5325 | 107293 | 679 | 927
NOD/ShiLtJ | NOD/ShiLtJ | 1 | 1 | yes | Male | classical laboratory strain | SNP_mDIV_C9-404_012709 | 0.2181574312784144 | 411533 | 5400 | 107221 | 2209 | 411512 | 5286 | 107193 | 585 | 1787
NON/ShiLtJ | NON/LtJ | 1 | 1 | yes | Male | classical laboratory strain | SNP_mDIV_A2-48_082108 | 0.2094106158677567 | 416137 | 5222 | 102556 | 2448 | 416118 | 5013 | 102516 | 855 | 1861
NONcNZO5/LtJ | NONcNZO5/LtJ | 1 | 1 | yes | Male | classical laboratory strain | SNP_mDIV_C11-406_012709 | 0.2098247787173491 | 415919 | 4990 | 104255 | 1199 | 415901 | 4782 | 104216 | 833 | 631
NOR/LtJ | NOR/LtJ | 1 | 1 | yes | Male | classical laboratory strain | SNP_mDIV_A3-49_082108 | 0.1980211375039659 | 422132 | 5276 | 97574 | 1381 | 422110 | 5168 | 97544 | 532 | 1009
NU/J | NU/J | 1 | 1 | yes | Male | classical laboratory strain | SNP_mDIV_D9-136_090908 | 0.2065570718306567 | 417639 | 5166 | 101887 | 1671 | 417625 | 5009 | 101869 | 768 | 1092
NZB/BINJ | NZB/BINJ | 1 | 1 | yes | Male | classical laboratory strain | SNP_mDIV_A1-50_091708 | 0.2144014681883035 | 413510 | 5607 | 105249 | 1997 | 413489 | 5363 | 105191 | 1269 | 1051
NZL/LtJ | NZL/LtJ | 1 | 1 | yes | Male | classical laboratory strain | SNP_mDIV_C5-94_090908 | 0.2048111284417787 | 418558 | 5819 | 100108 | 1878 | 418541 | 5591 | 100071 | 1011 | 1149
NZM2410/J | NZM2410/J | 1 | 1 | yes | Male | classical laboratory strain | SNP_mDIV_D10-137_090908 | 0.220724101048136 | 410182 | 5901 | 108101 | 2179 | 410163 | 5721 | 108060 | 908 | 1511
NZO/HILtJ | NZO/HILtJ | 1 | 1 | yes | Male | classical laboratory strain | SNP_mDIV_C7-31_081308 | 0.2097563848522788 | 415955 | 5652 | 102349 | 2407 | 415931 | 5416 | 102297 | 1126 | 1593
NZW/LacJ | NZW/LacJ | 1 | 1 | yes | Male | classical laboratory strain | SNP_mDIV_C8-32_081308 | 0.2238360219088348 | 408544 | 5682 | 110509 | 1628 | 408533 | 5528 | 110454 | 781 | 1067
P/J | P/J | 1 | 1 | yes | Male | classical laboratory strain | SNP_mDIV_B9-138_091708 | 0.2093479214914422 | 416170 | 5178 | 103257 | 1758 | 416151 | 4913 | 103205 | 1149 | 945
PL/J | PL/J | 1 | 1 | yes | Male | classical laboratory strain | SNP_mDIV_C6-95_090908 | 0.2199793678507038 | 410574 | 5391 | 108227 | 2171 | 410554 | 5205 | 108198 | 841 | 1565
PN/nBSwUmabJ | PN/nBSWUmaDJ | 1 | 1 | yes | Male | classical laboratory strain | SNP_mDIV_D11-139_090908 | 0.2051283999825215 | 418391 | 6901 | 98740 | 2331 | 418374 | 6658 | 98707 | 1065 | 1559
RF/J | RF/J | 1 | 1 | yes | Male | classical laboratory strain | SNP_mDIV_B11-141_091708 | 0.2155413659394753 | 412910 | 5286 | 105901 | 2266 | 412893 | 5146 | 105877 | 761 | 1686
RHJ/LeJ | RHJ/LeJ | 1 | 1 | yes | Male | classical laboratory strain | SNP_mDIV_B9-142_103008_3 | 0.18025773088154 | 431482 | 5227 | 86375 | 3279 | 431468 | 5151 | 86362 | 340 | 3042
RIIIS/J | RIIIS/J | 1 | 1 | yes | Male | classical laboratory strain | SNP_mDIV_C8-97_090908 | 0.2141943867635073 | 413619 | 5501 | 102659 | 4584 | 413603 | 5216 | 102612 | 1391 | 3541
RSV/LeJ | RSV/LeJ | 1 | 1 | yes | Male | classical laboratory strain | SNP_mDIV_B10-143_103008_3 | 0.1901235459179311 | 426289 | 4693 | 91971 | 3410 | 426274 | 4623 | 91956 | 336 | 3174
SB/LeJ | SB/LeJ | 1 | 1 | yes | Male | classical laboratory strain | SNP_mDIV_D9-144_103008_3 | 0.2085404939176956 | 416595 | 5291 | 102386 | 2091 | 416588 | 5190 | 102365 | 366 | 1854
SEA/GnJ | SEA/GnJ | 1 | 1 | yes | Male | classical laboratory strain | SNP_mDIV_D10-145_103008_3 | 0.205164496744642 | 418372 | 5353 | 99320 | 3318 | 418362 | 5187 | 99301 | 629 | 2884
SEC/1GnLeJ | SEC/1GnLeJ | 1 | 1 | yes | Male | classical laboratory strain | SNP_mDIV_D2-408_012709 | 0.2028049083997165 | 419614 | 4723 | 101030 | 996 | 419596 | 4605 | 101018 | 492 | 652
[NAME] | [NAME] | 1 | 1 | yes | Male | classical laboratory strain | SNP_mDIV_D3-409_012709 | 0.2030233888020244 | 419499 | 4702 | 101006 | 1156 | 419487 | 4582 | 100987 | 482 | 825
SH1/LeJ | SH1/LeJ | 1 | 1 | yes | Male | classical laboratory strain | SNP_mDIV_D11-146_103008_3 | 0.1709865625053433 | 436362 | 5274 | 82136 | 2591 | 436345 | 5202 | 82125 | 336 | 2355
PN/nBSwUmabJ | SI/ColTyrp1bDnahc11iv/J | 1 | 1 | yes | Male | classical laboratory strain | SNP_mDIV_A1-147_111308 | 0.1786428757340467 | 432332 | 5076 | 84278 | 4677 | 432308 | 4946 | 84262 | 562 | 4285
SJL/Bm | SJL/Bm | 1 | 1 | yes | Male | classical laboratory strain | SNP_mDIV_D4-410_012709 | 0.2110026730602265 | 415299 | 5057 | 104232 | 1775 | 415283 | 4857 | 104195 | 1149 | 879
SJL/J | SJL/J | 1 | 1 | yes | Male | classical laboratory strain | SNP_mDIV_D1-36_081308 | 0.2109019820922063 | 415352 | 5154 | 104216 | 1641 | 415340 | 4967 | 104183 | 935 | 938
SM/J | SM/J | 1 | 1 | yes | Male | classical laboratory strain | SNP_mDIV_A2-148_111308 | 0.2178230612714039 | 411709 | 5500 | 105991 | 3163 | 411693 | 5157 | 105934 | 1834 | 1745
SSL/LeJ | SSL/LeJ | 1 | 1 | yes | Male | classical laboratory strain | SNP_mDIV_A4-150_111308_2 | 0.1001685148842149 | 473638 | 4881 | 46455 | 1389 | 473624 | 4774 | 46442 | 449 | 1074
ST/bJ | ST/bJ | 1 | 1 | yes | Male | classical laboratory strain | SNP_mDIV_D5-411_012709 | 0.2087684734679299 | 416475 | 5220 | 102800 | 1868 | 416455 | 4984 | 102768 | 1062 | 1094
STX/Le | STX/Le | 1 | 1 | yes | Male | classical laboratory strain | SNP_mDIV_D6-412_012709 | 0.1274272697739013 | 459290 | 4831 | 60842 | 1400 | 459278 | 4790 | 60837 | 137 | 1321
SWR/J | SWR/J | 1 | 1 | yes | Male | classical laboratory strain | SNP_mDIV_A5-151_111308 | 0.2151044051348594 | 413140 | 5450 | 104901 | 2872 | 413120 | 5193 | 104869 | 1288 | 1893
TALLYHO/JngJ | TALLYHO/JngJ | 1 | 1 | yes | Male | classical laboratory strain | SNP_mDIV_A6-152_111308 | 0.2090116516548466 | 416347 | 5401 | 102289 | 2326 | 416333 | 5146 | 102243 | 1214 | 1427
TKDU/DnJ | TKDU/DnJ | 1 | 1 | yes | Male | classical laboratory strain | SNP_mDIV_A7-153_111308 | 0.1416474942197685 | 451805 | 4960 | 68914 | 684 | 451798 | 4890 | 68906 | 255 | 514
TSJ/LeJ | TSJ/LeJ | 1 | 1 | yes | Male | classical laboratory strain | SNP_mDIV_A8-154_111308 | 0.1971890121456106 | 422570 | 4570 | 98389 | 834 | 422564 | 4505 | 98381 | 270 | 643
YBR/EiJ | YBR/EiJ | 1 | 1 | yes | Male | classical laboratory strain | SNP_mDIV_D7-413_012709 | 0.1958914285388601 | 423253 | 5427 | 95707 | 1976 | 423233 | 5163 | 95665 | 1195 | 1107
ZRDCT Rax+/ChUmdJ | ZRDCT Rax+/ChUmdJ | 1 | 1 | yes | Male | classical laboratory strain | SNP_mDIV_A9-155_111308 | 0.1597110739166697 | 442297 | 5641 | 73583 | 4842 | 442284 | 5469 | 73545 | 827 | 4238
BUSNA | BUSNA | 1 | 1 | yes | Male | wild-derived laboratory strain | SNP_mDIV_A3-480_012709 | 0.5084589912284868 | 258729 | 14819 | 239071 | 13744 | 258623 | 11738 | 238711 | 10340 | 6951
CAST/EiJ | CAST/EiJ | 1 | 1 | yes | Male | wild-derived laboratory strain | SNP_mDIV_A9-9_081308 | 0.5453042862055273 | 239335 | 17228 | 190744 | 79056 | 239268 | 15779 | 190257 | 20398 | 60661
CZECHI/EiJ | CZECHI/EiJ | 1 | 1 | yes | Male | wild-derived laboratory strain | SNP_mDIV_B5-16_081308 | 0.5045282438165297 | 260798 | 14251 | 234981 | 16333 | 260684 | 11239 | 234500 | 11579 | 8361
CZECHII/EiJ | CZECHII/EiJ | 1 | 1 | yes | Male | wild-derived laboratory strain | SNP_mDIV_B6-17_081308 | 0.5073114941589739 | 259333 | 14877 | 237166 | 14987 | 259223 | 11700 | 236736 | 11224 | 7480
JF1/Ms | JF1/Ms | 1 | 1 | yes | Male | wild-derived laboratory strain | SNP_mDIV_D10-45_081308 | 0.5180436314862558 | 253684 | 14987 | 243452 | 14240 | 253591 | 12600 | 243094 | 9398 | 7680
LEWES/EiJ | LEWES/EiJ | 1 | 1 | yes | Male | wild-derived laboratory strain | SNP_mDIV_C1-23_081308 | 0.2664435000180484 | 386117 | 7452 | 125060 | 7734 | 386088 | 6679 | 124948 | 4569 | 4079
MOLD/RkJ | MOLD/RkJ | 1 | 1 | yes | Male | wild-derived laboratory strain | SNP_mDIV_D11-46_081308 | 0.4931748622148593 | 266774 | 13357 | 231870 | 14362 | 266697 | 11835 | 231541 | 8627 | 7663
MOLF/EiJ | MOLF/EiJ | 1 | 1 | yes | Male | wild-derived laboratory strain | SNP_mDIV_C2-24_081308 | 0.5040418874426964 | 261054 | 13561 | 236290 | 15458 | 260974 | 12433 | 235974 | 7279 | 9703
MOLG/DnJ | MOLG/DnJ | 1 | 1 | yes | Male | wild-derived laboratory strain | SNP_mDIV_A1-47_082108 | 0.4863924705953876 | 270344 | 12963 | 228423 | 14633 | 270264 | 11539 | 228075 | 8581 | 7904
MSM/Ms | MSM/Ms | 1 | 1 | yes | Male | wild-derived laboratory strain | SNP_mDIV_A6-54_082108 | 0.538842965785969 | 242736 | 16798 | 246277 | 20552 | 242622 | 14383 | 245840 | 9829 | 13689
PERA/EiJ | PERA/EiJ | 1 | 1 | yes | Male | wild-derived laboratory strain | SNP_mDIV_A2-51_091708 | 0.2624538578889474 | 388217 | 7020 | 124426 | 6700 | 388175 | 6214 | 124341 | 4305 | 3328
PERC/EiJ | PERC/EiJ | 1 | 1 | yes | Male | wild-derived laboratory strain | SNP_mDIV_A4-52_082108 | 0.2857343696270445 | 375963 | 8094 | 131982 | 10324 | 375918 | 6964 | 131849 | 6949 | 4683
PWD/PhJ | PWD/PhJ | 1 | 1 | yes | Male | wild-derived laboratory strain | SNP_mDIV_C10-34_081308 | 0.5126044193835813 | 256547 | 14572 | 243669 | 11575 | 256465 | 12164 | 243343 | 6992 | 7399
PWK/PhJ | PWK/PhJ | 1 | 1 | yes | Male | wild-derived laboratory strain | SNP_mDIV_C11-35_081308 | 0.5131306721787056 | 256270 | 16794 | 236321 | 16978 | 256192 | 14034 | 236018 | 7623 | 12496
RBA/DnJ | RBA/DnJ | 1 | 1 | yes | Male | wild-derived laboratory strain | SNP_mDIV_C7-96_090908 | 0.2005745084665905 | 420788 | 6730 | 93260 | 5585 | 420763 | 6032 | 93192 | 3527 | 2849
RBB/DnJ | RBB/DnJ | 1 | 1 | yes | Male | wild-derived laboratory strain | SNP_mDIV_D1-407_012709 | 0.2012185506960026 | 420449 | 6251 | 95967 | 3696 | 420426 | 5871 | 95922 | 2151 | 1993
RBF/DnJ | RBF/DnJ | 1 | 1 | yes | Male | wild-derived laboratory strain | SNP_mDIV_B10-140_091708 | 0.241854005695689 | 399060 | 6345 | 116786 | 4172 | 399024 | 5727 | 116685 | 2994 | 1933
SF/CAMEiJ | SF/CAMEiJ | 1 | 1 | yes | Male | wild-derived laboratory strain | SNP_mDIV_A5-53_082108 | 0.2656322727851311 | 386544 | 7590 | 121196 | 11033 | 386514 | 6972 | 121107 | 3835 | 7935
SOD1/EiJ | SOD1/EiJ | 1 | 1 | yes | Male | wild-derived laboratory strain | SNP_mDIV_A3-149_111308 | 0.2219399919827192 | 409542 | 6985 | 99711 | 10125 | 409507 | 6088 | 99570 | 6467 | 4731
STRA | STRA | 1 | 1 | yes | Male | wild-derived laboratory strain | SNP_mDIV_A4-481_012709 | 0.2748958418429867 | 381668 | 7288 | 130096 | 7311 | 381632 | 6286 | 129970 | 5621 | 2854
STRB | STRB | 1 | 1 | yes | Male | wild-derived laboratory strain | SNP_mDIV_A5-482_012709 | 0.2734690698244368 | 382419 | 7833 | 128854 | 7257 | 382378 | 6840 | 128711 | 5507 | 2927
STUF | STUF | 1 | 1 | yes | Male | wild-derived laboratory strain | SNP_mDIV_D10-476_012209 | 0.5049785034282425 | 260561 | 15197 | 235269 | 15336 | 260443 | 12022 | 234907 | 10454 | 8537
STUP | STUP | 1 | 1 | yes | Male | wild-derived laboratory strain | SNP_mDIV_D11-477_012209 | 0.5038063085741209 | 261178 | 14980 | 234886 | 15319 | 261066 | 11855 | 234470 | 10723 | 8249
TIRANO/EiJ | TIRANO/EiJ | 1 | 1 | yes | Male | wild-derived laboratory strain | SNP_mDIV_D3-38_081308 | 0.2868590687415339 | 375371 | 8160 | 134955 | 7877 | 375322 | 6870 | 134799 | 6035 | 3337
WLA | WLA1 | 1 | 1 | yes | Male | wild-derived laboratory strain | SNP_mDIV_C1-456_012209 | 0.2923077799921348 | 372503 | 7746 | 134943 | 11171 | 372451 | 6667 | 134773 | 7290 | 5182
WSB/EiJ | WSB/EiJ | 1 | 1 | yes | Male | wild-derived laboratory strain | SNP_mDIV_D4-39_081308 | 0.304318502630314 | 366181 | 10013 | 138775 | 11394 | 366161 | 9463 | 138645 | 3107 | 8987
ZALENDE/EiJ | ZALENDE/Ei | 1 | 1 | yes | Male | wild-derived laboratory strain | SNP_mDIV_D4-252_111308_2 | 0.2907537193913706 | 373321 | 8619 | 134923 | 9500 | 373284 | 7326 | 134764 | 6093 | 4896
C57BL/10ScNJ | C57BL/10ScNJ | 1 | 1 | no | Male | classical laboratory strain | SNP_mDIV_B11-395_012709 | 0.04531473526824648 | 502511 | 5530 | 7791 | 10531 | 502495 | 5486 | 7787 | 212 | 10383
C57BL/10ScSnJ | C57BL/10ScSnJ | 1 | 1 | no | Male | classical laboratory strain | SNP_mDIV_C1-396_012709 | 0.0899037356349135 | 479041 | 7781 | 7567 | 31974 | 479006 | 7709 | 7565 | 883 | 31200
NONcNZO10/LtJ | NONcNZO10/LtJ | 1 | 1 | no | Male | classical laboratory strain | SNP_mDIV_C10-405_012709 | 0.2369733434910889 | 401629 | 7943 | 98679 | 18112 | 401605 | 7701 | 98643 | 986 | 17428
22MO | 22MO1 | 1 | 1 | no | Male | wild-derived laboratory strain | SNP_mDIV_C4-459_012209 | 0.2982276489798865 | 369387 | 12868 | 130184 | 13924 | 369360 | 11714 | 130059 | 6854 | 8376
BIK/g1 | BIK/g1 | 1 | 1 | no | Male | wild-derived laboratory strain | SNP_mDIV_A1-434_012209 | 0.3172107461960663 | 359395 | 31508 | 121832 | 13628 | 359357 | 30616 | 121681 | 6767 | 7942
BULS | BULS | 1 | 1 | no | Male | wild-derived laboratory strain | SNP_mDIV_A2-479_012709 | 0.5101346409227092 | 257847 | 15815 | 238406 | 14295 | 257742 | 12882 | 237932 | 10443 | 7364
BZO | [NAME] | 1 | 1 | no | Male | wild-derived laboratory strain | SNP_mDIV_D1-467_012209 | 0.329270864403463 | 353047 | 47132 | 112175 | 14009 | 353007 | 46328 | 112061 | 4653 | 10314
CALB/RkJ | CALB/RkJ | 1 | 1 | no | Male | wild-derived laboratory strain | SNP_mDIV_B7-127_091708 | 0.294958042263609 | 371108 | 9805 | 130135 | 15315 | 371075 | 8755 | 129968 | 8081 | 8484
CTP | CTP1 | 7 | 5 | no | Male | wild-derived laboratory strain | SNP_mDIV_C6-461_012209 | 0.4283773745495029 | 300881 | 84317 | 112485 | 28680 | 300801 | 83598 | 112275 | 7640 | 22049
DCA | DCA1 | 1 | 1 | no | Male | wild-derived laboratory strain | SNP_mDIV_A9-442_012209 | 0.329968101861263 | 352680 | 45216 | 114700 | 13767 | 352639 | 44457 | 114573 | 5672 | 9022
DCP | DCP1 | 1 | 1 | no | Male | wild-derived laboratory strain | SNP_mDIV_A11-444_012209 | 0.3236834655931363 | 355988 | 39135 | 117887 | 13353 | 355959 | 38271 | 117744 | 6268 | 8121
DDO | DDO1 | 1 | 1 | no | Male | wild-derived laboratory strain | SNP_mDIV_C9-464_012209 | 0.2772098342778653 | 380450 | 14613 | 112419 | 18881 | 380421 | 13959 | 112340 | 3522 | 16121
DEB | [NAME] | 1 | 1 | no | Male | wild-derived laboratory strain | SNP_mDIV_A4-437_012209 | 0.3524658838102223 | 340838 | 75317 | 91376 | 18832 | 340786 | 74793 | 91284 | 3061 | 16439
DGA | DGA1 | 1 | 1 | no | Male | wild-derived laboratory strain | SNP_mDIV_B8-452_012209 | 0.3177388988207758 | 359117 | 21680 | 131718 | 13848 | 359072 | 20567 | 131557 | 8304 | 6863
DIK | DIK1 | 1 | 1 | no | Male | wild-derived laboratory strain | SNP_mDIV_B7-451_012209 | 0.3487897135626934 | 342773 | 58438 | 108905 | 16247 | 342726 | 57703 | 108805 | 4971 | 12158
DJO | DJO1 | 1 | 1 | no | Male | wild-derived laboratory strain | SNP_mDIV_C7-462_012209 | 0.2890704703788071 | 374207 | 9858 | 133233 | 9065 | 374169 | 8672 | 133085 | 6333 | 4104
DMZ | DMZ1 | 1 | 1 | no | Male | wild-derived laboratory strain | SNP_mDIV_C11-466_012209 | 0.2988963889939072 | 369035 | 19963 | 127096 | 10269 | 369003 | 18950 | 126953 | 6436 | 5021
DOT | [NAME] | 1 | 1 | no | Male | wild-derived laboratory strain | SNP_mDIV_C8-463_012209 | 0.2780096625332708 | 380029 | 12286 | 124020 | 10028 | 379994 | 11518 | 123898 | 6241 | 4712
IS/CamRK | IS/CamRK | 1 | 1 | no | Male | wild-derived laboratory strain | SNP_mDIV_D7-255_111308_2 | 0.256769567769771 | 391209 | 7982 | 115110 | 12062 | 391178 | 7179 | 115011 | 5452 | 7543
MBK | MBK1 | 1 | 1 | no | Male | wild-derived laboratory strain | SNP_mDIV_B4-448_012209 | 0.5063406812408927 | 259844 | 21247 | 228090 | 17182 | 259731 | 18324 | 227663 | 10656 | 9989
MBS | MBS1 | 1 | 1 | no | Male | wild-derived laboratory strain | SNP_mDIV_B1-445_012209 | 0.5256087528948653 | 249702 | 43169 | 215791 | 17701 | 249607 | 40691 | 215430 | 7914 | 12721
MBT | MBT1 | 7 | 5 | no | Male | wild-derived laboratory strain | SNP_mDIV_B5-449_012209 | 0.5446165478956537 | 239697 | 67577 | 195131 | 23958 | 239601 | 65798 | 194767 | 7718 | 18479
MCZ | MCZ | 1 | 1 | no | Male | wild-derived laboratory strain | SNP_mDIV_D3-469_012209 | 0.5256695474415944 | 249670 | 30117 | 227104 | 19472 | 249537 | 27475 | 226645 | 8903 | 13803
[NAME] | [NAME] | 1 | 1 | no | Male | wild-derived laboratory strain | SNP_mDIV_D4-470_012209 | 0.5208173826807736 | 252224 | 56118 | 172576 | 45445 | 252130 | 53834 | 172307 | 8886 | 39206
MDH | MDH1 | 1 | 1 | no | Male | wild-derived laboratory strain | SNP_mDIV_A2-435_012209 | 0.4941874713838169 | 266241 | 18215 | 227275 | 14632 | 266146 | 15270 | 226883 | 10622 | 7442
MGA | MGA1 | 1 | 1 | no | Male | wild-derived laboratory strain | SNP_mDIV_B10-454_012209 | 0.4921641528754871 | 267306 | 25288 | 213958 | 19811 | 267203 | 22825 | 213587 | 11998 | 10750
MH | MH | 1 | 1 | no | Male | wild-derived laboratory strain | SNP_mDIV_D5-471_012209 | 0.5176066706816398 | 253914 | 24147 | 231326 | 16976 | 253808 | 21061 | 230993 | 9799 | 10702
MOR/RkJ | MOR/RkJ | 1 | 1 | no | Male | wild-derived laboratory strain | SNP_mDIV_C7-402_012709 | 0.150745778103704 | 447016 | 59666 | 3093 | 16588 | 446958 | 59585 | 3093 | 670 | 16057
MPB | MPB1 | 1 | 1 | no | Male | wild-derived laboratory strain | SNP_mDIV_B2-446_012209 | 0.5124999287563905 | 256602 | 19167 | 233232 | 17362 | 256500 | 16004 | 232865 | 10774 | 10220
PWK hybrid | PWK1 | 7 | 5 | no | Male | wild-derived laboratory strain | SNP_mDIV_B6-450_012209 | 0.5519897865161495 | 235816 | 104470 | 143817 | 42260 | 235713 | 102610 | 143549 | 8258 | 36233
SKIVE/EiJ | SKIVE/EiJ | 1 | 1 | no | Male | wild-derived laboratory strain | SNP_mDIV_A7-55_082108 | 0.4929829794267454 | 266875 | 15142 | 226917 | 17429 | 266758 | 12081 | 226536 | 11400 | 9588
STLT | STLT | 1 | 1 | no | Male | wild-derived laboratory strain | SNP_mDIV_A6-483_012709 | 0.2761117327775698 | 381028 | 8570 | 129031 | 7734 | 381001 | 7554 | 128899 | 5500 | 3409
STUS | STUS | 1 | 1 | no | Male | wild-derived laboratory strain | SNP_mDIV_A1-478_012709 | 0.502917188328207 | 261646 | 14864 | 235334 | 14519 | 261523 | 11865 | 234890 | 10861 | 7224
WMP | WMP1 | 1 | 1 | no | Male | wild-derived laboratory strain | SNP_mDIV_C5-460_012209 | 0.306110041929239 | 365238 | 24234 | 124039 | 12852 | 365195 | 23304 | 123911 | 6398 | 7555
BAG102 | BAG102 | 1 | 1 | no | Female | wild caught | SNP_mDIV_B6-188_103008_3 | 0.5389873528344508 | 242660 | 42358 | 220388 | 20957 | 242576 | 39747 | 220071 | 7638 | 16331
BAG3 | BAG3 | 1 | 1 | no | Female | wild caught | SNP_mDIV_C5-169_082108 | 0.5257474404545912 | 249629 | 30044 | 227696 | 18994 | 249529 | 27177 | 227247 | 10400 | 12010
BAG56 | BAG56 | 1 | 1 | no | Male | wild caught | SNP_mDIV_C4-168_082108 | 0.5427072191624411 | 240702 | 36396 | 221332 | 27933 | 240609 | 33840 | 220874 | 9373 | 21667
BAG68 | BAG68 | 1 | 1 | no | Female | wild caught | SNP_mDIV_B3-190_082108 | 0.5315571193263964 | 246571 | 37676 | 224416 | 17700 | 246469 | 35069 | 223978 | 8413 | 12434
BAG74 | BAG74 | 1 | 1 | no | Male | wild caught | SNP_mDIV_C3-167_082108 | 0.5362307001062006 | 244111 | 36024 | 223303 | 22925 | 244040 | 33393 | 222923 | 9319 | 16688
BAG94 | BAG94 | 1 | 1 | no | Female | wild caught | SNP_mDIV_B4-191_082108 | 0.5311049598850983 | 246809 | 35206 | 225274 | 19074 | 246690 | 32404 | 224881 | 8814 | 13574
BAG99 | BAG99 | 1 | 1 | no | Male | wild caught | SNP_mDIV_D11-189_082108 | 0.5323056521829992 | 246177 | 40612 | 224617 | 14957 | 246093 | 38024 | 224256 | 7485 | 10505
KCT222 | KCT222 | 1 | 1 | no | Male | wild caught | SNP_mDIV_A3-156_091708 | 0.2853012084815992 | 376191 | 14885 | 125016 | 10271 | 376153 | 13980 | 124882 | 5220 | 6128
MWN1026 | MWN1026 | 1 | 1 | no | Male | wild caught | SNP_mDIV_B9-162_082108 | 0.3347955688374753 | 350139 | 53731 | 110266 | 12227 | 350096 | 52923 | 110148 | 3589 | 9607
MWN1030 | MWN1030 | 1 | 1 | no | Female | wild caught | SNP_mDIV_B11-164_082108 | 0.3246960747620938 | 355455 | 41594 | 116460 | 12854 | 355387 | 40721 | 116308 | 4904 | 9043
MWN1106 | MWN1106 | 1 | 1 | no | Female | wild caught | SNP_mDIV_B10-163_082108 | 0.3386750208506297 | 348097 | 46766 | 112632 | 18868 | 348044 | 45889 | 112473 | 5307 | 14650
MWN1194 | MWN1194 | 1 | 1 | no | Male | wild caught | SNP_mDIV_B7-160_082108 | 0.325347716309847 | 355112 | 44767 | 114251 | 12233 | 355077 | 43929 | 114148 | 4944 | 8265
MWN1198 | MWN1198 | 1 | 1 | no | Male | wild caught | SNP_mDIV_C2-166_082108 | 0.3506021509870565 | 341819 | 67635 | 102194 | 14715 | 341777 | 67018 | 102082 | 3317 | 12169
MWN1214 | MWN1214 | 1 | 1 | no | Female | wild caught | SNP_mDIV_B6-159_082108 | 0.3439470479497989 | 345322 | 59517 | 106276 | 15248 | 345248 | 58800 | 106164 | 4521 | 11630
MWN1279 | MWN1279 | 1 | 1 | no | Male | wild caught | SNP_mDIV_B8-161_082108 | 0.3508073325822674 | 341711 | 64192 | 103088 | 17372 | 341657 | 63484 | 102977 | 4173 | 14072
MWN1287 | MWN1287 | 1 | 1 | no | Female | wild caught | SNP_mDIV_C1-165_082108 | 0.3439128510172638 | 345340 | 47096 | 112804 | 21123 | 345271 | 46310 | 112663 | 5689 | 16430
RDS10105 | RDS10105 | 1 | 1 | no | Female | wild caught | SNP_mDIV_A4-157_091708 | 0.5466360667448129 | 238634 | 37183 | 214981 | 35565 | 238551 | 34550 | 214674 | 9164 | 29424
RDS13554 | RDS13554 | 1 | 1 | no | Female | wild caught | SNP_mDIV_A5-158_091708 | 0.5309339752224225 | 246899 | 41051 | 222283 | 16130 | 246800 | 38445 | 221885 | 8090 | 11143
RDS12763 | TuckerNachmancollaboration/12763 | 1 | 1 | no | Female | wild caught | SNP_mDIV_B3-98_091708 | 0.301497255696164 | 367666 | 36555 | 111569 | 10573 | 367624 | 35795 | 111455 | 4219 | 7270
Yu2097m | Yu2097m | 1 | 1 | no | Male | wild caught | SNP_mDIV_B5-486_022709 | 0.5346291437658042 | 244954 | 39942 | 222584 | 18883 | 244867 | 37639 | 222313 | 6863 | 14681
Yu2099f | Yu2099f | 1 | 1 | no | Female | wild caught | SNP_mDIV_B6-487_022709 | 0.5367702517084217 | 243827 | 40664 | 222038 | 19834 | 243726 | 38307 | 221754 | 7142 | 15434
Yu2115m | Yu2115m | 1 | 1 | no | Male | wild caught | SNP_mDIV_B8-489_022709 | 0.526469375697 | 249249 | 28417 | 228001 | 20696 | 249139 | 25917 | 227626 | 9345 | 14336
Yu2120f | Yu2120f | 1 | 1 | no | Female | wild caught | SNP_mDIV_B10-491_022709 | 0.5374940867804158 | 243446 | 38758 | 223506 | 20653 | 243354 | 36343 | 223202 | 7398 | 16066
(129S1/SvImJxCAST/EiJ)F1 | (129S1xCAST)F1 005 Female | na | 5 | no | Female | F1 hybrid | SNP_mDIV_D1-214_103008_3 | 0.5549706191354635 | 234247 | 190638 | 73303 | 28175 | 234080 | 190160 | 73208 | 2046 | 26869
(129S1/SvImJIxPWK/PhJ)F1 | (129SIxPWK)F1 001 Female | na | 5 | no | Female | F1 hybrid | SNP_mDIV_C3-205_103008_3 | 0.5672549172339241 | 227781 | 208758 | 74256 | 15568 | 227653 | 208340 | 74156 | 1017 | 15197
(129S1/SvImJIxPWK/PhJ)F1 | (129SIxPWK)F1 002 Female | na | 5 | no | Female | F1 hybrid | SNP_mDIV_C4-206_103008_3 | 0.5642265888749779 | 229375 | 208803 | 74486 | 13699 | 229269 | 208455 | 74372 | 826 | 13441
(129S1/SvImJIxPWK/PhJ)F1 | (129SIxPWK)F1 006 Male | na | 5 | no | Male | F1 hybrid | SNP_mDIV_C5-207_103008_3 | 0.5634590577225222 | 229779 | 208976 | 74527 | 13081 | 229676 | 208695 | 74421 | 738 | 12833
(129S1/SvImJIxPWK/PhJ)F1 | (129SIxPWK)F1 007 Male | na | 5 | no | Male | F1 hybrid | SNP_mDIV_C6-208_103008_3 | 0.5644203714926771 | 229273 | 207578 | 74090 | 15422 | 229186 | 207225 | 73996 | 828 | 15128
(129X1/SvJxCAST/EiJ)F1 | (129X1xCAST) | na | 5 | no | Male | F1 hybrid | [NAME] | 0.5491058452056851 | 237334 | 190276 | 72502 | 26251 | 237146 | 189930 | 72396 | 2112 | 24779
(A/JxPWK/PhJ)F1 | (AJxPWK)F1 f001 | na | 5 | no | Female | F1 hybrid | SNP_mDIV_A10-223_111308 | 0.5726960291661838 | 224917 | 213330 | 69069 | 19047 | 224797 | 212596 | 68976 | 1499 | 18495
(A/JxPWK/PhJ)F1 | (AJxPWK)F1 m005 | na | 5 | no | Male | F1 hybrid | SNP_mDIV_A11-224_111308 | 0.5711818649867106 | 225714 | 214631 | 69189 | 16829 | 225599 | 214028 | 69099 | 1173 | 16464
(AKR/JxC57BL/6J)F1 | (AKRxB6)F1 | na | 5 | no | Male | F1 hybrid | SNP_mDIV_C5-331_120908 | 0.2103510315124734 | 415642 | 94966 | 4184 | 11571 | 415624 | 94937 | 4184 | 73 | 11545
(C57BL/6JxAKR/J)F1 | (B6xAKR)F1 | na | 5 | no | Male | F1 hybrid | SNP_mDIV_D8-345_120908 | 0.2040245989934703 | 418972 | 95677 | 3966 | 7748 | 418958 | 95656 | 3966 | 47 | 7736
(C57BL/6JxBALB/cJ)F1 | (B6xBALB)F1 | na | 5 | no | Male | F1 hybrid | SNP_mDIV_C7-333_120908 | 0.1916681073707689 | 425476 | 90075 | 3614 | 7198 | 425466 | 90048 | 3614 | 54 | 7181
(C57BL/6JxCAST/EiJ)F1 | (B6xCAST)F1 m001 | na | 5 | no | Male | F1 hybrid | SNP_mDIV_A8-225_112108 | 0.440990343166218 | 294242 | 191189 | 13758 | 27174 | 294001 | 190910 | 13755 | 1631 | 26066
(C57BL/6JxNOD/ShiJ)F1 | (B6xNOD)F1 | na | 5 | no | Male | F1 hybrid | SNP_mDIV_C8-334_120908 | 0.2324973449881546 | 403985 | 96343 | 4440 | 21595 | 403952 | 96212 | 4440 | 440 | 21319
(C57BL/6JxNZW/LacJ)F1 | (B6xNZW)F1 | na | 5 | no | Male | F1 hybrid | SNP_mDIV_C9-335_120908 | 0.2207848955948651 | 410150 | 98578 | 4524 | 13111 | 410134 | 98511 | 4524 | 252 | 12942
(C57BL/6JxPWK/PhJ)F1 | (B6xPWK)F1 f002 | na | 5 | no | Female | F1 hybrid | SNP_mDIV_A9-226_112108 | 0.4623406280456643 | 283004 | 203671 | 12885 | 26803 | 282811 | 202953 | 12881 | 2084 | 25634
(C57BL/6JxPWK/PhJ)F1 | (B6xPWK)F1 m005 | na | 5 | no | Male | F1 hybrid | SNP_mDIV_B1-227_111308 | 0.4567741273607757 | 285934 | 211621 | 12755 | 16053 | 285743 | 211198 | 12753 | 921 | 15748
(BALB/cJxC57BL/6J)F1 | (BALBxB6)F1 | na | 5 | no | Male | F1 hybrid | SNP_mDIV_C10-336_120908 | 0.1929067962603754 | 424824 | 89609 | 3412 | 8518 | 424811 | 89584 | 3412 | 69 | 8487
(CAST/EiJx129S1/SvImJ)F1 | (CASTx129)F1 m001 | na | 5 | no | Male | F1 hybrid | SNP_mDIV_B2-228_111308 | 0.5488740659962801 | 237456 | 194143 | 74604 | 20160 | 237279 | 193909 | 74495 | 1380 | 19300
(CAST/EiJx129S1/SvImJ)F1 | (CASTx129S1)F1 012 Female | na | 5 | no | Female | F1 hybrid | SNP_mDIV_C11-213_103008_3 | 0.5552479942549153 | 234101 | 193167 | 74193 | 24902 | 233945 | 192694 | 74085 | 2131 | 23508
(CAST/EiJxA/J)F1 | (CASTxAJ)F1 f001 | na | 5 | no | Female | F1 hybrid | SNP_mDIV_B3-229_111308 | 0.5549744187946342 | 234245 | 195165 | 70894 | 26059 | 234087 | 194591 | 70802 | 2410 | 24473
(CAST/EiJxA/J)F1 | (CASTxAJ)F1 m005 | na | 5 | no | Male | F1 hybrid | SNP_mDIV_B4-230_111308 | 0.5485263971821728 | 237639 | 195247 | 71538 | 21939 | 237468 | 194920 | 71447 | 1562 | 20966
(CAST/EiJxC57BL/6J)F1 | (CASTxB6)F1 f004 | na | 5 | no | Female | F1 hybrid | SNP_mDIV_B5-231_111308 | 0.4550509819269212 | 286841 | 190614 | 13608 | 35300 | 286661 | 189668 | 13606 | 5041 | 31387
(CAST/EiJxC57BL/6J)F1 | (CASTxB6)F1 m001 | na | 5 | no | Male | F1 hybrid | SNP_mDIV_B6-232_111308 | 0.4402494096279563 | 294632 | 193612 | 13933 | 24186 | 294430 | 193271 | 13928 | 1716 | 23018
(CAST/EiJxC3H/HeJ)F1 | (CASTxC3H)F1 | na | 5 | no | Male | F1 hybrid | SNP_mDIV_D9-346_120908 | 0.5484884005904671 | 237659 | 192051 | 70767 | 25886 | 237429 | 191834 | 70672 | 1444 | 24984
(CAST/EiJxNOD/ShiJ)F1 | (CASTxNOD)F1 f007 | na | 5 | no | Female | F1 hybrid | SNP_mDIV_B7-233_111308 | 0.5539200133748003 | 234800 | 190960 | 70173 | 30430 | 234639 | 190286 | 70066 | 2812 | 28560
(CAST/EiJxNOD/ShiJ)F1 | (CASTxNOD)F1 m001 | na | 5 | no | Male | F1 hybrid | SNP_mDIV_B8-234_111308 | 0.5449224204588848 | 239536 | 192724 | 71704 | 22399 | 239324 | 192451 | 71579 | 1672 | 21337
(CAST/EiJxNZW/LacJ)F1 | (CASTxNZW)F1 | na | 5 | no | Male | F1 hybrid | SNP_mDIV_D10-347_120908 | 0.550572513645526 | 236562 | 187757 | 73608 | 28436 | 236382 | 187521 | 73478 | 1654 | 27328
(CAST/EiJxPWK/PhJ)F1 | (CASTxPWK)F1 f001 | na | 5 | no | Female | F1 hybrid | SNP_mDIV_B9-235_111308 | 0.652454674815669 | 182935 | 148458 | 165922 | 29048 | 182808 | 147619 | 165445 | 4023 | 26468
(CAST/EiJxPWK/PhJ)F1 | (CASTxPWK)F1 m004 | na | 5 | no | Male | F1 hybrid | SNP_mDIV_B10-236_111308 | 0.6479881754606611 | 185286 | 149693 | 167692 | 23692 | 185160 | 149113 | 167223 | 2858 | 22009
(CAST/EiJxWSB/EiJ)F1 | (CASTxWSB)F1 f014 | na | 5 | no | Female | F1 hybrid | SNP_mDIV_B11-237_111308 | 0.5845433664600286 | 218681 | 184109 | 94047 | 29526 | 218530 | 183681 | 93815 | 2367 | 27970
(DBA/2JxC57BL/6J)F1 | (DBA/2xB6)F1 | na | 5 | no | Male | F1 hybrid | SNP_mDIV_C11-337_120908 | 0.2130506893531651 | 414221 | 100135 | 3272 | 8735 | 414204 | 100101 | 3272 | 75 | 8711
(NOD/ShiJxPWK/PhJ)F1 | (NODxPWK)F1 m004 | na | 5 | no | Male | F1 hybrid | SNP_mDIV_C2-239_111308 | 0.578101044336323 | 222072 | 208605 | 68105 | 27581 | 221916 | 207815 | 67963 | 2654 | 26015
(NZW/LacJxC57BL/6J)F1 | (NZWxB6)F1 | na | 5 | no | Male | F1 hybrid | SNP_mDIV_D2-339_120908 | 0.2149714170638893 | 413210 | 100034 | 4672 | 8447 | 413199 | 100011 | 4672 | 87 | 8394
(NZW/LacJxPWD/PhJ)F1 | (NZWxPWD)F1 | na | 5 | no | Male | F1 hybrid | SNP_mDIV_D3-340_120908 | 0.5685069049306277 | 227122 | 201372 | 76135 | 21734 | 226979 | 201066 | 76011 | 1146 | 21161
(NZW/LacJxWSB/EiJ)F1 | (NZWxWSB)F1 | na | 5 | no | Male | F1 hybrid | SNP_mDIV_D11-348_120908 | 0.3964887349604741 | 317666 | 130844 | 62181 | 15672 | 317622 | 130743 | 62166 | 379 | 15453
(PWD/PhJxC3H/HeJ)F1 | (PWDxC3H)F1 | na | 5 | no | Male | F1 hybrid | SNP_mDIV_D5-342_120908 | 0.5713775474339952 | 225611 | 208355 | 71122 | 21275 | 225520 | 208067 | 71032 | 932 | 20812
(PWD/PhJxNOD/ShiJ)F1 | (PWDxNOD)F1 | na | 5 | no | Male | F1 hybrid | SNP_mDIV_D6-343_120908 | 0.5738948216344995 | 224286 | 210360 | 69952 | 21765 | 224169 | 210004 | 69848 | 1197 | 21145
(PWD/PhJxNZW/LacJ)F1 | (PWDxNZW)F1 | na | 5 | no | Male | F1 hybrid | SNP_mDIV_D7-344_120908 | 0.5661663148815551 | 228354 | 202223 | 75658 | 20128 | 228249 | 201847 | 75550 | 1197 | 19520
(PWK/PhJx129S1/SvImJ)F1 | (PWKx129S1)F1 001 Female | na | 5 | no | Female | F1 hybrid | SNP_mDIV_C7-209_103008_3 | 0.5662119107916019 | 228330 | 207622 | 74337 | 16074 | 228208 | 207229 | 74228 | 935 | 15763
(PWK/PhJx129S1/SvImJ)F1 | (PWKx129S1)F1 002 Female | na | 5 | no | Female | F1 hybrid | SNP_mDIV_C8-210_103008_3 | 0.5653132913977617 | 228803 | 208572 | 74384 | 14604 | 228692 | 208222 | 74280 | 835 | 14334
(PWK/PhJx129S1/SvImJ)F1 | (PWKx129S1)F1 005 Male | na | 5 | no | Male | F1 hybrid | SNP_mDIV_C9-211_103008 | 0.5633298693107228 | 229847 | 209432 | 74514 | 12570 | 229745 | 209110 | 74411 | 741 | 12356
(PWK/PhJx129S1/SvImJ)F1 | (PWKx129S1)F1 008 Male | na | 5 | no | Male | F1 hybrid | SNP_mDIV_C10-212_103008_3 | 0.564638851894985 | 229158 | 209117 | 74578 | 13510 | 229052 | 208759 | 74478 | 823 | 13251
(PWK/PhJxA/J)F1 | (PWKxAJ)F1 f001 | na | 5 | no | Female | F1 hybrid | SNP_mDIV_C3-240_111308 | 0.5826739341481069 | 219665 | 211659 | 68148 | 26891 | 219540 | 211107 | 68042 | 2172 | 25502
(PWK/PhJxA/J)F1 | (PWKxAJ)F1 m003 | na | 5 | no | Male | F1 hybrid | SNP_mDIV_C4-241_111308 | 0.5683511189046342 | 227204 | 214210 | 69714 | 15235 | 227089 | 213855 | 69600 | 932 | 14887
(PWK/PhJxC57BL/6J)F1 | (PWKxB6)F1 f010 | na | 5 | no | Female | F1 hybrid | SNP_mDIV_C5-242_111308 | 0.4780560183751518 | 274732 | 207186 | 13040 | 31405 | 274522 | 206525 | 13032 | 2347 | 29937
(PWK/PhJxC57BL/6J)F1 | (PWKxB6)F1 m008 | na | 5 | no | Male | F1 hybrid | SNP_mDIV_C6-243_111308 | 0.4759814044680192 | 275824 | 207882 | 13260 | 29397 | 275638 | 207335 | 13255 | 1990 | 28145
(PWK/PhJxCAST/EiJ)F1 | (PWKxCAST)F1 f001 | na | 5 | no | Female | F1 hybrid | SNP_mDIV_C7-244_111308 | 0.6507049317676205 | 183856 | 148141 | 167024 | 27342 | 183718 | 147429 | 166491 | 3716 | 25009
(PWK/PhJxNOD/ShiJ)F1 | (PWKxNOD)F1 f002 | na | 5 | no | Female | F1 hybrid | SNP_mDIV_C9-246_111308 | 0.5745046669313763 | 223965 | 209759 | 68534 | 24105 | 223811 | 208710 | 68400 | 2545 | 22897
(PWK/PhJxNOD/ShiJ)F1 | (PWKxNOD)F1 m006 | na | 5 | no | Male | F1 hybrid | SNP_mDIV_C10-247_111308 | 0.5595378094584915 | 231843 | 211136 | 69936 | 13448 | 231725 | 210833 | 69825 | 808 | 13172
(WSB/EiJxCAST/EiJ)F1 | (WSBxCAST)F1 f003 | na | 5 | no | Female | F1 hybrid | SNP_mDIV_C11-248_111308 | 0.5839050237193724 | 219017 | 185124 | 94512 | 27710 | 218829 | 184509 | 94254 | 2809 | 25962
(WSB/EiJxCAST/EiJ)F1 | (WSBxCAST)F1 m004 | na | 5 | no | Male | F1 hybrid | SNP_mDIV_D1-249_111308 | 0.5806981113794092 | 220705 | 185571 | 95420 | 24667 | 220485 | 185188 | 95163 | 2262 | 23265
(WSB/EiJxNZW/LacJ)F1 | (WSBXNZW)F1 | na | 5 | no | Male | F1 hybrid | SNP_mDIV_A1-350_121608 | 0.4005809678871806 | 315512 | 128263 | 59788 | 22800 | 315467 | 128055 | 59758 | 714 | 22369
(WSB/EiJxPWK/PhJ)F1 | (WSBxPWK)F1 f003 | na | 5 | no | Female | F1 hybrid | SNP_mDIV_D2-250_111308 | 0.6037677420335397 | 208562 | 208151 | 91017 | 18633 | 208451 | 207681 | 90792 | 1436 | 18003
(WSB/EiJxPWK/PhJ)F1 | (WSBxPWK)F1 m001 | na | 5 | no | Male | F1 hybrid | SNP_mDIV_D3-251_111308 | 0.6009578940769014 | 210041 | 208154 | 91054 | 17114 | 209942 | 207734 | 90841 | 1282 | 16564
OR1005f102 | OR1005f102 | 2 | 5 | no | Female | CC-UNC G2:F1 | SNP_mDIV_A10-10_081308 | 0.3755279151460114 | 328699 | 135477 | 45849 | 16338 | 328600 | 135266 | 45818 | 760 | 15919
OR1005m105 | OR1005m105 | 2 | 5 | no | Male | CC-UNC G2:F1 | SNP_mDIV_A11-11_081308 | 0.4066072273317084 | 312340 | 134281 | 65228 | 14514 | 312253 | 134033 | 65131 | 1070 | 13876
OR1018f102 | OR1018f102 | 2 | 5 | no | Female | CC-UNC G2:F1 | SNP_mDIV_B1-12_081308 | 0.4197559478914741 | 305419 | 142310 | 59305 | 19329 | 305301 | 141843 | 59215 | 1655 | 18349
OR1048f18 | OR1048f18 | 2 | 5 | no | Female | CC-UNC G2:F1 | SNP_mDIV_B2-13_081308 | 0.4497067613035111 | 289654 | 154354 | 54372 | 27983 | 289537 | 153630 | 54304 | 2482 | 26410
OR1048m20 | OR1048m20 | 2 | 5 | no | Male | CC-UNC G2:F1 | SNP_mDIV_B3-14_081308 | 0.4268290134374947 | 301696 | 158928 | 50555 | 15184 | 301601 | 158678 | 50493 | 818 | 14773
OR1109f19 | OR1109f19 | 2 | 5 | no | Female | CC-UNC G2:F1 | SNP_mDIV_C4-26_081308 | 0.4288580314345803 | 300628 | 148597 | 62635 | 14503 | 300548 | 148365 | 62541 | 899 | 14010
OR1109m20 | OR1109m20 | 2 | 5 | no | Male | CC-UNC G2:F1 | SNP_mDIV_C5-27_081308 | 0.420810353311308 | 304864 | 145853 | 59811 | 15835 | 304767 | 145553 | 59739 | 1014 | 15290
OR1244m19 | OR1244m19 | 2 | 5 | no | Male | CC-UNC G2:F1 | SNP_mDIV_A11-202_091708 | 0.3988312248391319 | 316433 | 141092 | 54936 | 13902 | 316334 | 140811 | 54865 | 863 | 13490
OR1262f101 | OR1262f101 | 2 | 5 | no | Female | CC-UNC G2:F1 | SNP_mDIV_D5-40_081308 | 0.4469349099385785 | 291113 | 161969 | 55849 | 17432 | 291032 | 161585 | 55781 | 1005 | 16960
OR1305f101 | OR1305f101 | 2 | 5 | no | Female | CC-UNC G2:F1 | SNP_mDIV_D6-41_081308 | 0.4455423348525637 | 291846 | 162288 | 56113 | 16116 | 291758 | 162017 | 56050 | 825 | 15713
OR1305m105 | OR1305m105 | 2 | 5 | no | Male | CC-UNC G2:F1 | SNP_mDIV_D2-216_103008_3 | 0.4615730968932087 | 283408 | 168133 | 59046 | 15776 | 283315 | 167886 | 58996 | 745 | 15421
OR1325f102 | OR1325f102 | 2 | 5 | no | Female | CC-UNC G2:F1 | SNP_mDIV_D7-42_081308 | 0.4525964021027313 | 288133 | 144008 | 70465 | 23757 | 288024 | 143488 | 70342 | 1820 | 22689
OR1325m106 | OR1325m106 | 2 | 5 | no | Male | CC-UNC G2:F1 | SNP_mDIV_D8-43_081308 | 0.4602983112414817 | 284079 | 145067 | 67798 | 29419 | 283997 | 144526 | 67696 | 2289 | 27855
OR1400m105 | OR1400m105 | 2 | 5 | no | Male | CC-UNC G2:F1 | SNP_mDIV_D9-44_081308 | 0.4294583775835308 | 300312 | 153722 | 59265 | 13064 | 300245 | 153520 | 59184 | 691 | 12723
OR151f102 | OR151f102 | 2 | 5 | no | Female | CC-UNC G2:F1 | SNP_mDIV_A9-57_082108 | 0.4459412990654739 | 291636 | 155317 | 57380 | 22030 | 291528 | 154853 | 57331 | 1508 | 21143
OR151m105 | OR151m105 | 2 | 5 | no | Male | CC-UNC G2:F1 | SNP_mDIV_A10-58_082108 | 0.4447292077900612 | 292274 | 162418 | 54198 | 17473 | 292161 | 162250 | 54145 | 799 | 17008
OR1587f101 | OR1587f101 | 2 | 5 | no | Female | CC-UNC G2:F1 | SNP_mDIV_A11-59_082108 | 0.4409884433366327 | 294243 | 158450 | 57329 | 16341 | 294121 | 158197 | 57269 | 934 | 15842
OR1587m104 | OR1587m104 | 2 | 5 | no | Male | CC-UNC G2:F1 | SNP_mDIV_B1-60_082108 | 0.392485794024276 | 319773 | 141566 | 50784 | 14240 | 319674 | 141383 | 50725 | 750 | 13831
OR1611m121 | OR1611m121 | 2 | 5 | no | Male | CC-UNC G2:F1 | SNP_mDIV_D3-217_103008_3 | 0.4706276846966827 | 278642 | 166518 | 62913 | 18290 | 278534 | 166193 | 62816 | 1205 | 17615
OR294f18 | OR294f18 | 2 | 5 | no | Female | CC-UNC G2:F1 | SNP_mDIV_C3-25_081308 | 0.4406958695804987 | 294397 | 157247 | 59238 | 15481 | 294273 | 156995 | 59175 | 847 | 15073
OR294m21 | OR294m21 | 2 | 5 | no | Male | CC-UNC G2:F1 | SNP_mDIV_A1-62_090908 | 0.4560084960379054 | 286337 | 165181 | 58105 | 16740 | 286207 | 164845 | 58040 | 1033 | 16238
OR447f19 | OR447f19 | 2 | 5 | no | Female | CC-UNC G2:F1 | SNP_mDIV_A2-64_090908 | 0.4147650955709273 | 308046 | 137379 | 66126 | 14812 | 307948 | 137062 | 66026 | 1113 | 14214
OR496f18 | OR496f18 | 2 | 5 | no | Female | CC-UNC G2:F1 | SNP_mDIV_D4-218_103008_3 | 0.4070403884771536 | 312112 | 141486 | 55158 | 17607 | 312012 | 141190 | 55088 | 1043 | 17030
OR496m20 | OR496m20 | 2 | 5 | no | Male | CC-UNC G2:F1 | SNP_mDIV_A9-200_091708 | 0.4383590791905966 | 295627 | 155931 | 60958 | 13847 | 295553 | 155801 | 60868 | 629 | 13512
OR615m104 | OR615m104 | 2 | 5 | no | Male | CC-UNC G2:F1 | SNP_mDIV_A10-201_091708 | 0.4296616593491563 | 300205 | 157742 | 53345 | 15071 | 300094 | 157532 | 53297 | 763 | 14677
OR656f14 | OR656f14 | 2 | 5 | no | Female | CC-UNC G2:F1 | SNP_mDIV_D5-181_082108 | 0.4220528418600852 | 304210 | 147931 | 57027 | 17195 | 304081 | 147642 | 56951 | 1056 | 16633
OR656m18 | OR656m18 | 2 | 5 | no | Male | CC-UNC G2:F1 | SNP_mDIV_D4-180_082108 | 0.4048498849653186 | 313265 | 143824 | 52254 | 17020 | 313191 | 143644 | 52206 | 638 | 16684
OR672f102 | OR672f102 | 2 | 5 | no | Female | CC-UNC G2:F1 | SNP_mDIV_A6-183_091708 | 0.4313620068279875 | 299310 | 152653 | 56536 | 17864 | 299186 | 152279 | 56456 | 1198 | 17244
OR672m106 | OR672m106 | 2 | 5 | no | Male | CC-UNC G2:F1 | SNP_mDIV_D6-182_082108 | 0.4228317719900525 | 303800 | 158162 | 50929 | 13472 | 303727 | 157994 | 50890 | 550 | 13202
OR804f103 | OR804f103 | 2 | 5 | no | Female | CC-UNC G2:F1 | SNP_mDIV_D8-185_082108 | 0.3909507317193648 | 320581 | 147047 | 44739 | 13996 | 320456 | 146934 | 44690 | 663 | 13620
OR804m105 | OR804m105 | 2 | 5 | no | Male | CC-UNC G2:F1 | SNP_mDIV_D7-184_082108 | 0.4143699310171878 | 308254 | 154430 | 48108 | 15571 | 308130 | 154244 | 48051 | 789 | 15149
OR873f102 | OR873f102 | 2 | 5 | no | Female | CC-UNC G2:F1 | SNP_mDIV_D9-186_082108 | 0.4380399078202685 | 295795 | 150190 | 65567 | 14811 | 295691 | 149956 | 65482 | 914 | 14320
OR873m106 | OR873m106 | 2 | 5 | no | Male | CC-UNC G2:F1 | SNP_mDIV_D5-219_103008_3 | 0.4467487266392205 | 291211 | 148798 | 70486 | 15868 | 291106 | 148434 | 70372 | 1324 | 15127
OR88f16 | OR88f16 | 2 | 5 | no | Female | CC-UNC G2:F1 | SNP_mDIV_D1-177_082108 | 0.435912098684748 | 296915 | 158379 | 54217 | 16852 | 296816 | 158100 | 54169 | 874 | 16404
OR88m19 | OR88m19 | 2 | 5 | no | Male | CC-UNC G2:F1 | SNP_mDIV_C11-176_082108 | 0.400869741984144 | 315360 | 142379 | 54801 | 13823 | 315267 | 142243 | 54756 | 516 | 13581
OR906f102 | OR906f102 | 2 | 5 | no | Female | CC-UNC G2:F1 | SNP_mDIV_D7-221_103008_3 | 0.4507003721766157 | 289131 | 158702 | 57662 | 20868 | 289028 | 158315 | 57602 | 1137 | 20281
OR906m104 | OR906m104 | 2 | 5 | no | Male | CC-UNC G2:F1 | SNP_mDIV_D8-222_103008_3 | 0.4143547323805055 | 308262 | 152022 | 47979 | 18100 | 308163 | 151720 | 47926 | 1059 | 17495
OR95f16 | OR95f16 | 2 | 5 | no | Female | CC-UNC G2:F1 | SNP_mDIV_D3-179_082108 | 0.4135549041251 | 308683 | 149540 | 55170 | 12970 | 308586 | 149334 | 55094 | 830 | 12519
OR95m20 | OR95m20 | 2 | 5 | no | Male | CC-UNC G2:F1 | SNP_mDIV_D2-178_082108 | 0.3890395031565669 | 321587 | 137177 | 53987 | 13612 | 321524 | 137046 | 53923 | 565 | 13305
OR978m21 | OR978m21 | 2 | 5 | no | Male | CC-UNC G2:F1 | SNP_mDIV_D6-220_103008_3 | 0.4228507702859053 | 303790 | 141041 | 64980 | 16552 | 303689 | 140700 | 64899 | 1151 | 15924
(C57B6/JxDBA/2J)F1 | (B6XDBA/2)F1 UT | na | 5 | no | Male | F1 hybrid | SNP_mDIV_B3-380_121608 | 0.212220463824395 | 414658 | 99887 | 3252 | 8566 | 414632 | 99846 | 3252 | 80 | 8553
BXD1 | BXD1 | 3 | 5 | no | Male | BXD | SNP_mDIV_D9-261_111308 | 0.09403586498291105 | 476866 | 4186 | 44942 | 369 | 476854 | 4140 | 44940 | 108 | 321
BXD100 | BXD100 | 3 | 5 | no | Male | BXD | SNP_mDIV_A3-421_022709 | 0.09850616399708945 | 474513 | 4410 | 46282 | 1158 | 474488 | 4362 | 46275 | 142 | 1096
BXD102 | BXD102 | 3 | 5 | no | Male | BXD | SNP_mDIV_A5-423_022709 | 0.1053702482887285 | 470900 | 5119 | 48581 | 1763 | 470881 | 5057 | 48573 | 157 | 1695
BXD103MK88 | BXD103MK88 | 3 | 5 | no | Male | BXD | SNP_mDIV_B9-373_121608 | 0.1276628486424768 | 459166 | 4302 | 62397 | 498 | 459150 | 4242 | 62387 | 146 | 438
BXD12 | BXD12 | 3 | 5 | no | Male | BXD | SNP_mDIV_B1-267_112108 | 0.1119873547342803 | 467417 | 4232 | 54425 | 289 | 467405 | 4173 | 54417 | 143 | 225
BXD13 | BXD13 | 3 | 5 | no | Male | BXD | SNP_mDIV_B2-268_112108 | 0.1194555848340404 | 463486 | 4470 | 57348 | 1059 | 463477 | 4422 | 57346 | 116 | 1002
BXD16 | BXD16 | 3 | 5 | no | Male | BXD | SNP_mDIV_B5-271_112108 | 0.108009111582691 | 469511 | 4367 | 49619 | 2866 | 469500 | 4319 | 49614 | 154 | 2776
BXD18 | BXD18 | 3 | 5 | no | Male | BXD | SNP_mDIV_A2-352_121608 | 0.1310369459859451 | 457390 | 4562 | 60322 | 4089 | 457362 | 4514 | 60309 | 221 | 3957
BXD2 | BXD2 | 3 | 5 | no | Male | BXD | SNP_mDIV_D10-262_111308 | 0.1209526505472459 | 462698 | 5023 | 52454 | 6188 | 462672 | 4955 | 52442 | 311 | 5983
BXD20 | BXD20 | 3 | 5 | no | Male | BXD | SNP_mDIV_B6-274_112108 | 0.1054880377230163 | 470838 | 4229 | 50828 | 468 | 470830 | 4174 | 50820 | 116 | 423
BXD21 | BXD21 | 3 | 5 | no | Male | BXD | SNP_mDIV_B7-275_112108 | 0.1240379737937507 | 461074 | 4383 | 59842 | 1064 | 461056 | 4332 | 59830 | 173 | 972
BXD24 | BXD24 | 3 | 5 | no | Male | BXD | SNP_mDIV_D9-415_012709 | 0.1406139869253727 | 452349 | 4616 | 66186 | 3212 | 452331 | 4550 | 66182 | 181 | 3119
BXD28 | BXD28 | 3 | 5 | no | Male | BXD | SNP_mDIV_B8-278_112108 | 0.1221134464238558 | 462087 | 4711 | 56797 | 2768 | 462072 | 4661 | 56792 | 144 | 2694
BXD29 | BXD29 | 3 | 5 | no | Male | BXD | SNP_mDIV_B9-279_112108_2 | 0.1030714544905322 | 472110 | 4209 | 49734 | 310 | 472096 | 4163 | 49731 | 119 | 254
BXD31 | BXD31 | 3 | 5 | no | Male | BXD | SNP_mDIV_B10-280_112108 | 0.09860685496510968 | 474460 | 4261 | 47078 | 564 | 474451 | 4218 | 47076 | 99 | 519
BXD32 | BXD32 | 3 | 5 | no | Male | BXD | SNP_mDIV_B11-281_112108 | 0.1736634223910115 | 434953 | 4327 | 86498 | 585 | 434933 | 4260 | 86489 | 179 | 502
BXD33 | BXD33 | 3 | 5 | no | Male | BXD | SNP_mDIV_A1-282_120908 | 0.109568871672211 | 468690 | 4380 | 52387 | 906 | 468681 | 4324 | 52383 | 122 | 853
BXD34 | BXD34 | 3 | 5 | no | Male | BXD | SNP_mDIV_C2-283_112108 | 0.1244825339167077 | 460840 | 4185 | 61029 | 309 | 460829 | 4132 | 61023 | 113 | 266
BXD39 | BXD39 | 3 | 5 | no | Male | BXD | SNP_mDIV_C3-284_112108 | 0.1198602485357063 | 463273 | 4383 | 56827 | 1880 | 463256 | 4322 | 56819 | 150 | 1816
BXD40 | BXD40 | 3 | 5 | no | Male | BXD | SNP_mDIV_C4-285_112108 | 0.09903431662179907 | 474235 | 4220 | 47556 | 352 | 474225 | 4166 | 47552 | 114 | 306
BXD42 | BXD42 | 3 | 5 | no | Male | BXD | SNP_mDIV_C5-286_112108 | 0.116193577436104 | 465203 | 4447 | 55245 | 1468 | 465190 | 4395 | 55235 | 145 | 1398
BXD43 | BXD43 | 3 | 5 | no | Male | BXD | SNP_mDIV_C6-287_112108 | 0.09555382882155472 | 476067 | 4350 | 45399 | 547 | 476057 | 4305 | 45395 | 99 | 507
BXD44 | BXD44 | 3 | 5 | no | Male | BXD | SNP_mDIV_C7-288_112108 | 0.1333547380799942 | 456170 | 4387 | 64343 | 1463 | 456151 | 4329 | 64337 | 161 | 1385
BXD45 | BXD45 | 3 | 5 | no | Male | BXD | SNP_mDIV_A6-356_121608 | 0.1015895874140089 | 472890 | 4263 | 47935 | 1275 | 472871 | 4207 | 47924 | 143 | 1218
BXD48 | BXD48 | 3 | 5 | no | Male | BXD | SNP_mDIV_A7-357_121608 | 0.09626816474562228 | 475691 | 4510 | 44648 | 1514 | 475673 | 4457 | 44638 | 147 | 1448
BXD49 | BXD49 | 3 | 5 | no | Male | BXD | SNP_mDIV_C9-290_112108 | 0.0909828388393561 | 478473 | 4458 | 42892 | 540 | 478466 | 4420 | 42889 | 80 | 508
BXD5 | BXD5 | 3 | 5 | no | Male | BXD | SNP_mDIV_D11-263_111308 | 0.1005845775633926 | 473419 | 4232 | 48260 | 452 | 473409 | 4194 | 48258 | 105 | 397
BXD6 | BXD6 | 3 | 5 | no | Male | BXD | SNP_mDIV_A10-264_112108 | 0.1051403689089089 | 471021 | 4299 | 49273 | 1770 | 471001 | 4244 | 49268 | 174 | 1676
BXD60 | BXD60 | 3 | 5 | no | Male | BXD | SNP_mDIV_D2-294_112108 | 0.1173543733127138 | 464592 | 5246 | 47345 | 9180 | 464584 | 5195 | 47342 | 118 | 9124
BXD61 | BXD61 | 3 | 5 | no | Male | BXD | SNP_mDIV_A11-361_121608 | 0.1090217207516486 | 468978 | 4240 | 52724 | 421 | 468971 | 4191 | 52720 | 146 | 335
BXD65 | BXD65 | 3 | 5 | no | Male | BXD | SNP_mDIV_D11-417_012709 | 0.108466970512745 | 469270 | 4855 | 49411 | 2827 | 469249 | 4806 | 49405 | 121 | 2782
[NAME] | [NAME] | 3 | 5 | no | Male | BXD | SNP_mDIV_D6-298_112108_2 | 0.1332616464303152 | 456219 | 4753 | 64912 | 479 | 456201 | 4702 | 64907 | 145 | 408
BXD68 | BXD68 | 3 | 5 | no | Male | BXD | SNP_mDIV_D7-299_112108 | 0.09598319030782942 | 475841 | 4270 | 44922 | 1330 | 475821 | 4219 | 44915 | 155 | 1253
BXD69 | BXD69 | 3 | 5 | no | Male | BXD | SNP_mDIV_D8-300_112108 | 0.1420597572397756 | 451588 | 5083 | 55009 | 14683 | 451559 | 5014 | 54996 | 508 | 14286
BXD73 | BXD73 | 3 | 5 | no | Male | BXD | SNP_mDIV_D11-303_112108 | 0.126576146119693 | 459738 | 4302 | 61830 | 493 | 459718 | 4242 | 61824 | 141 | 438
BXD74 | BXD74 | 3 | 5 | no | Male | BXD | SNP_mDIV_A2-304_120908 | 0.1249251942100793 | 460607 | 4893 | 60625 | 238 | 460594 | 4834 | 60618 | 122 | 195
BXD75 | BXD75 | 3 | 5 | no | Male | BXD | SNP_mDIV_A3-305_120908 | 0.1300794318749608 | 457894 | 4536 | 61060 | 2873 | 457873 | 4460 | 61050 | 265 | 2715
[NAME] | [NAME] | 3 | 5 | no | Male | BXD | SNP_mDIV_A11-265_112108 | 0.1046065167954434 | 471302 | 4240 | 50453 | 368 | 471293 | 4193 | 50446 | 101 | 330
[NAME] | [NAME] | 3 | 5 | no | Male | BXD | SNP_mDIV_A11-313_120908 | 0.1246060228397513 | 460775 | 4290 | 60769 | 529 | 460758 | 4229 | 60760 | 138 | 478
BXD84 | BXD84 | 3 | 5 | no | Male | BXD | SNP_mDIV_B1-314_120908 | 0.1253773536513775 | 460369 | 4559 | 58233 | 3202 | 460360 | 4502 | 58230 | 127 | 3144
BXD86 | BXD86 | 3 | 5 | no | Male | BXD | SNP_mDIV_B1-362_121608 | 0.1175424564416572 | 464493 | 4541 | 55616 | 1713 | 464465 | 4485 | 55608 | 173 | 1632
BXD9 | BXD9 | 3 | 5 | no | Male | BXD | SNP_mDIV_D8-414_012709 | 0.1180839078734638 | 464208 | 4257 | 57496 | 402 | 464194 | 4194 | 57488 | 139 | 348
BXD96 | BXD96 | 3 | 5 | no | Male | BXD | SNP_mDIV_B8-370_121608 | 0.0920619420437987 | 477905 | 4386 | 42523 | 1549 | 477885 | 4340 | 42514 | 178 | 1446
BXD99 | BXD99 | 3 | 5 | no | Male | BXD | SNP_mDIV_A2-420_022709 | 0.1191991078400267 | 463621 | 5137 | 55131 | 2474 | 463601 | 5075 | 55128 | 224 | 2335
C57BL/6J | C57BL/6J | 1 | 1 | no | Male | classical laboratory strain | SNP_mDIV_A5-378_121608 | 0.02174734926277111 | 514916 | 5298 | 341 | 5808 | 514902 | 5274 | 341 | 51 | 5795
(NOD.NON-Thy1 (N13F21) |  | 6 | 5 | no | Male | consomic | SNP_mDIV_C8-SNP09_014_022709 | 0.2161455117475962 | 412592 | 5360 | 107374 | 1037 | 412571 | 5240 | 107336 | 614 | 602
C57BL/6J-Chr10.3<PWD/Ph>/ForeJ | C57BL/6J-Chr10.3<PWD/Ph>/ForeJ | 4 | 5 | no | Male | consomic | SNP_mDIV_B1-68_091708 | 0.02143957686995479 | 515078 | 4425 | 6046 | 814 | 515069 | 4340 | 6039 | 201 | 714
C57BL/6J-Chr11.1<PWD/Ph>/ForeJ | C57BL/6J-Chr11.1<PWD/Ph>/ForeJ | 4 | 5 | no | Male | consomic | SNP_mDIV_A7-69_090908 | 0.03404304633874344 | 508444 | 4893 | 7925 | 5101 | 508417 | 4805 | 7911 | 396 | 4834
C57BL/6J-Chr12<PWD/Ph>/ForeJ | C57BL/6J-Chr12<PWD/Ph>/ForeJ | 4 | 5 | no | Male | consomic | SNP_mDIV_A9-71_090908 | 0.0326675697189962 | 509168 | 4472 | 11930 | 793 | 509159 | 4344 | 11911 | 388 | 561
C57BL/6J-Chr14<PWD/Ph>/ForeJ | C57BL/6J-Chr14<PWD/Ph>/ForeJ | 4 | 5 | no | Male | consomic | SNP_mDIV_A10-72_090908 | 0.02753423017955292 | 511870 | 4531 | 9350 | 612 | 511860 | 4458 | 9342 | 181 | 522
C57BL/6J-Chr18<PWD/Ph>/ForeJ | C57BL/6J-Chr18<PWD/Ph>/ForeJ | 4 | 5 | no | Male | consomic | SNP_mDIV_B2-75_103008_4 | 0.03087603042007137 | 510111 | 4567 | 10481 | 1204 | 510100 | 4436 | 10467 | 407 | 953
C57BL/6J-Chr19<PWD/Ph>/ForeJ | C57BL/6J-Chr19<PWD/Ph>/ForeJ | 4 | 5 | no | Male | consomic | SNP_mDIV_B2-76_090908 | 0.02700987721401393 | 512146 | 4884 | 6918 | 2415 | 512139 | 4809 | 6910 | 217 | 2288
C57BL/6J-Chr9<PWD/Ph>/ForeJ | C57BL/6J-Chr9<PWD/Ph>/ForeJ | 4 | 5 | no | Male | consomic | SNP_mDIV_B4-81_103008_4 | 0.03328311450462895 | 508844 | 4605 | 11599 | 1315 | 508824 | 4466 | 11579 | 432 | 1062
C57BL/6J-ChrX.2<PWD/Ph>/ForeJ | C57BL/6J-ChrX.2<PWD/Ph>/ForeJ | 4 | 5 | no | Male | consomic | SNP_mDIV_B6-82_090908 | 0.009599838894451151 | 521310 | 4219 | 285 | 549 | 521304 | 4198 | 285 | 47 | 529
C57BL/6J-ChrY<PWD/Ph>/ForeJ | C57BL/6J-ChrY<PWD/Ph>/ForeJ | 4 | 5 | no | Male | consomic | SNP_mDIV_B5-84_103008_4 | 0.01029137686349535 | 520946 | 4355 | 289 | 773 | 520939 | 4333 | 289 | 43 | 759
(NODxC57BLKS)F1 |  | na | 5 | no | Male | congenic | SNP_mDIV_D1-SNP09_023_022709 | 0.2472951176279488 | 396196 | 95545 | 21620 | 13002 | 396167 | 95413 | 21616 | 343 | 12824
Genetic distance is calculated as the proportion of non-reference allele calls out of all genotype calls.
CEL ID corresponds to the name of the Affymetrix CEL file containing raw intensity data, which are available for download.
1, [NAME], [NAME], Didion JP, [NAME] RJ, Bell TA, [NAME], [NAME], Hon-Tsen Yu A, Nachman MW, Pialek J, Tucker P, Boursot P, [NAME], [NAME], Pardo-Manuel de Villena F: Subspecific origin and haplotype diversity in the laboratory mouse. [NAME], 43:648–655.
2, Collaborative Cross Consortium: The Genome Architecture of the Collaborative Cross Mouse Genetic Reference Population. Genetics 2011, In press.
3, [NAME], [NAME], Gu J, Silver LM, [NAME]: A new set of BXD recombinant inbred lines from advanced intercross populations in mice. BMC Genet 2004, 5:7.
4, [NAME], [NAME], [NAME] R, Trachtulec Z, [NAME] V, [NAME], [NAME], Paigen B, Forejt J: Mouse consomic strains: exploiting genetic divergence between Mus m. musculus and Mus m. domesticus subspecies. Genome Res 2008, 18:509-515.
5, this manuscript
6, http://jaxmice.jax.org/
7, Bonhomme F and Boursot P Montpellier, France
na, not applicable