Spreadsheet: 09084ae5-0b48-4726-83a5-76df47c880e8
Sheet: Sheet1

#platforms: Minimally Transformed Cell Lines vs Caner Cell Lines | Unnamed: 1 | Unnamed: 2
#phenotype:
#gene set: c5.bp.v2.5.symbols.gmt.txt
[NAME] | p-Value | B-H Corr
nucleobase__nucleoside__nucleotide_and_nucleic_acid_metabolic_process | 1.19363408046524e-10 | 9.84748116383826e-08
biopolymer_metabolic_process | 4.96850116604719e-10 | 2.04950673099446e-07
cell_cycle_go_0007049 | 1.00649466538982e-07 | 2.76786032982201e-05
dna_metabolic_process | 2.15573024098247e-07 | 4.28545009195646e-05
regulation_of_cell_cycle | 2.59724247997361e-07 | 4.28545009195646e-05
rna_metabolic_process | 1.21834133826048e-06 | 0.000167521934010816
mrna_metabolic_process | 1.94438750200642e-06 | 0.000229159955593614
ribonucleoprotein_complex_biogenesis_and_assembly | 9.58039773713004e-06 | 0.000828314446288669
response_to_dna_damage_stimulus | 9.89815822638462e-06 | 0.000828314446288669
regulation_of_metabolic_process | 1.00401751065293e-05 | 0.000828314446288669
regulation_of_cellular_metabolic_process | 1.7515818609981e-05 | 0.00131368639574858
cellular_macromolecule_metabolic_process | 2.66360371121709e-05 | 0.00183122755146175
cellular_protein_metabolic_process | 2.95996847335944e-05 | 0.00187844153117041
response_to_endogenous_stimulus | 3.49652149101986e-05 | 0.00206045016435099
regulation_of_nucleobase__nucleoside__nucleotide_and_nucleic_acid_metabolic_process | 4.68919936923439e-05 | 0.00251971316768961
dna_replication | 4.88671644642835e-05 | 0.00251971316768961
protein_rna_complex_assembly | 5.23130665034399e-05 | 0.00253872234501987
rna_processing | 5.61375451320067e-05 | 0.0025729708185503
cellular_macromolecule_catabolic_process | 7.04269964121317e-05 | 0.00305801431789519
#platforms: [NAME] vs Cancer Cell Lines
#phenotype:
#gene set: c5.bp.v2.5.symbols.gmt.txt
[NAME] | p-Value | Benjamini Hochberg Correction
rna_processing | 1.30005245457809e-08 | 1.07254327502692e-05
nucleobase__nucleoside__nucleotide_and_nucleic_acid_metabolic_process | 2.8440331201196e-08 | 1.17316366204933e-05
ribonucleoprotein_complex_biogenesis_and_assembly | 6.05210576098969e-08 | 1.66432908427216e-05
intracellular_transport | 8.08599058821357e-08 | 1.66773555881905e-05
nucleocytoplasmic_transport | 6.84562430741664e-07 | 0.000111231088833644
biopolymer_metabolic_process | 8.3802329153837e-07 | 0.000111231088833644
nuclear_transport | 9.43778935558192e-07 | 0.000111231088833644
rna_metabolic_process | 1.58971134511798e-06 | 0.000140413870620692
response_to_dna_damage_stimulus | 1.66512919486105e-06 | 0.000140413870620692
cell_cycle_go_0007049 | 1.70198631055384e-06 | 0.000140413870620692
mrna_metabolic_process | 2.48451905393576e-06 | 0.000183482343164842
response_to_endogenous_stimulus | 2.6688340823977e-06 | 0.000183482343164842
protein_rna_complex_assembly | 4.92602585766555e-06 | 0.000304618669945014
protein_targeting | 5.16928652027903e-06 | 0.000304618669945014
cellular_component_assembly | 1.15597784845489e-05 | 0.00063578781665019
macromolecular_complex_assembly | 1.24034011419471e-05 | 0.000639333485705948
macromolecule_localization | 1.38231245242481e-05 | 0.000639333485705948
intracellular_protein_transport | 1.4365488048007e-05 | 0.000639333485705948
translation | 1.47240439132279e-05 | 0.000639333485705948
ribosome_biogenesis_and_assembly | 1.85311693680079e-05 | 0.000764410736430326
protein_transport | 2.3755275784465e-05 | 0.000922714214794326
establishment_of_cellular_localization | 2.51999409854875e-05 | 0.000922714214794326
rna_splicing | 2.65844507492118e-05 | 0.000922714214794326
dna_metabolic_process | 2.68425953394713e-05 | 0.000922714214794326
dna_repair | 3.26456434290856e-05 | 0.00107730623315982
cellular_localization | 3.95882364092603e-05 | 0.00125616519375537
cell_cycle_process | 7.34765756548183e-05 | 0.00205308396481894
mrna_processing_go_0006397 | 7.45554532927128e-05 | 0.00205308396481894
dna_recombination | 7.46046224038288e-05 | 0.00205308396481894
rrna_metabolic_process | 7.71461853447119e-05 | 0.00205308396481894
rrna_processing | 7.71461853447119e-05 | 0.00205308396481894
rna_splicing__via_transesterification_reactions | 0.000102505400900954 | 0.00264271736697772
establishment_of_protein_localization | 0.000130910459919197 | 0.00327276149797994
nuclear_import | 0.000143402803748471 | 0.00338020894549968
protein_import_into_nucleus | 0.000143402803748471 | 0.00338020894549968
mitotic_cell_cycle | 0.000210256545544074 | 0.00481837916871836
#platforms: Primary Tumors vs Normal Mucosa
#phenotype:
#gene set: c5.bp.v2.5.symbols.gmt.txt
[NAME] | p-Value | Benjamini Hochberg Correction
nucleobase__nucleoside__nucleotide_and_nucleic_acid_metabolic_process | 3.01314528883267e-13 | 2.48584486328695e-10
biopolymer_metabolic_process | 1.61193280945326e-12 | 6.64922283899471e-10
rna_metabolic_process | 3.0915492388317e-11 | 8.50176040678718e-09
intracellular_transport | 1.93295396355708e-08 | 3.88992488914441e-06
nuclear_transport | 2.80840481980959e-08 | 3.88992488914441e-06
nucleocytoplasmic_transport | 2.82903628301411e-08 | 3.88992488914441e-06
establishment_of_cellular_localization | 7.4914098147083e-08 | 8.82916156733478e-06
macromolecule_catabolic_process | 1.08252897312866e-07 | 1.11635800353893e-05
cellular_localization | 1.28135409838137e-07 | 1.17457459018292e-05
catabolic_process | 1.52921473484113e-07 | 1.26160215624393e-05
macromolecule_localization | 1.79191768201469e-07 | 1.34393826151102e-05
regulation_of_metabolic_process | 5.14709309951122e-07 | 3.53862650591396e-05
rna_processing | 7.30226304312964e-07 | 4.63412846967842e-05
regulation_of_cellular_metabolic_process | 8.23630890600668e-07 | 4.85353917675393e-05
cellular_catabolic_process | 1.40584001484533e-06 | 7.40339378291904e-05
transcription | 1.43580970335399e-06 | 7.40339378291904e-05
rna_biosynthetic_process | 2.78023523136994e-06 | 0.000123087602010851
transcription__dna_dependent | 2.81976728067068e-06 | 0.000123087602010851
protein_targeting | 2.83474477358325e-06 | 0.000123087602010851
biopolymer_catabolic_process | 2.99068732956264e-06 | 0.000123365852344459
protein_localization | 3.16009205914014e-06 | 0.000124146473751934
organelle_organization_and_biogenesis | 5.66698616200067e-06 | 0.000212511981075025
cell_cycle_go_0007049 | 5.99673995416161e-06 | 0.000215100454877536
cellular_macromolecule_catabolic_process | 7.13333841673158e-06 | 0.000245208508075148
cell_cycle_arrest_go_0007050 | 7.96778717060409e-06 | 0.000262936976629935
cellular_component_assembly | 1.56281065081254e-05 | 0.00049589184112321
protein_transport | 2.21640449115101e-05 | 0.000674444705721366
ribonucleoprotein_complex_biogenesis_and_assembly | 2.2890244557816e-05 | 0.000674444705721366
intracellular_protein_transport | 2.58763097664704e-05 | 0.000736136398528901
mrna_metabolic_process | 3.09472203471328e-05 | 0.000851048559546152
regulation_of_nucleobase__nucleoside__nucleotide_and_nucleic_acid_metabolic_process | 4.00615167458484e-05 | 0.00106615326823628
macromolecular_complex_assembly | 4.55402100377755e-05 | 0.0011740835400364
establishment_of_protein_localization | 5.2639155830314e-05 | 0.00131210215717296
regulation_of_transcription | 5.40745131440978e-05 | 0.00131210215717296
regulation_of_gene_expression | 7.21520092076266e-05 | 0.00164486074896216
protein_metabolic_process | 7.23556048234375e-05 | 0.00164486074896216
protein_import | 7.37695123776971e-05 | 0.00164486074896216
nuclear_import | 0.000104425599789403 | 0.00220900307246815
protein_import_into_nucleus | 0.000104425599789403 | 0.00220900307246815
regulation_of_rna_metabolic_process | 0.000121729772938006 | 0.00251067656684637
regulation_of_transcription__dna_dependent | 0.000158046257172084 | 0.00318019907724315
regulation_of_cell_cycle | 0.000162509064975724 | 0.00319214234773744
ribosome_biogenesis_and_assembly | 0.000167201349980938 | 0.00320793287754126
transcription_from_rna_polymerase_ii_promoter | 0.000187375292243885 | 0.00351328672957285
response_to_dna_damage_stimulus | 0.000236106340516739 | 0.00431153741277858
cellular_protein_metabolic_process | 0.000248783245682338 | 0.00431153741277858
cell_cycle_process | 0.000249076911318701 | 0.00431153741277858
rna_splicing | 0.00025085308583439 | 0.00431153741277858
interphase_of_mitotic_cell_cycle | 0.000280955136014782 | 0.00473036708596317
negative_regulation_of_cell_cycle | 0.00029881847316393 | 0.00493050480720486