Spreadsheet: 532068ff-8d79-4df9-a6f5-e557e89f3b25
Sheet: Sheet1

Supplementary table S5: DUX4 binding sites at transposable elements in C2C12 mouse myoblasts | Unnamed: 1 | Unnamed: 2 | Unnamed: 3 | Unnamed: 4 | Unnamed: 5 | Unnamed: 6 | Unnamed: 7 | Unnamed: 8
Name | Family | Class | number of DUX4 peaks | Proportion of all peaks | regions in genome (autosomes) | basepairs in genome (autosomes) | basepair proportion in genome (autosomes) | DUX4 peak enrichment
MER34-int | ERV1 | LTR | 1 | 0.000357909806728704 | 56 | 14862 | 6.01130336897228e-06 | 59.5394683582396
MTE2b | MaLR | LTR | 193 | 0.0690765926986399 | 13707 | 3180257 | 0.00128633357679301 | 53.7003728619575
LTR80A | ERVL | LTR | 1 | 0.000357909806728704 | 107 | 25739 | 1.04107749572048e-05 | 34.3787862286863
MLT1E1 | MaLR | LTR | 4 | 0.00143163922691482 | 543 | 116121 | 4.69680095887788e-05 | 30.4811559921171
MER57E1 | ERV1 | LTR | 1 | 0.000357909806728704 | 163 | 30541 | 1.23530625886006e-05 | 28.9733662532385
MLT1E3 | MaLR | LTR | 6 | 0.00214745884037223 | 958 | 219204 | 8.86624777077244e-05 | 24.2206048814846
MER57C2 | ERV1 | LTR | 2 | 0.000715819613457409 | 392 | 75772 | 3.06478588934038e-05 | 23.3562682452663
MLT1M | MaLR | LTR | 1 | 0.000357909806728704 | 230 | 39324 | 1.59055641018346e-05 | 22.5021762470796
MLT1E | MaLR | LTR | 2 | 0.000715819613457409 | 495 | 108294 | 4.38021859130322e-05 | 16.3420979692348
MTE2a | MaLR | LTR | 65 | 0.0232641374373658 | 14500 | 3697231 | 0.00149543649348464 | 15.5567538566322
MER57D | ERV1 | LTR | 1 | 0.000357909806728704 | 291 | 61545 | 2.48933969750639e-05 | 14.3777005238469
LTR37B | ERV1 | LTR | 1 | 0.000357909806728704 | 352 | 71181 | 2.87909154290685e-05 | 12.4313451446335
LTR82A | ERVL | LTR | 1 | 0.000357909806728704 | 304 | 72699 | 2.94049080622336e-05 | 12.1717709836471
MLT1E1A | MaLR | LTR | 3 | 0.00107372942018611 | 1048 | 234343 | 9.47858205756339e-05 | 11.3279540512005
MLT2B5 | ERVL | LTR | 1 | 0.000357909806728704 | 417 | 78717 | 3.18390369597222e-05 | 11.2412258945356
RLTR8 | ERVK | LTR | 1 | 0.000357909806728704 | 289 | 79715 | 3.22427027356766e-05 | 11.1004902306988
MLT2B3 | ERVL | LTR | 4 | 0.00143163922691482 | 1453 | 341395 | 0.000138085648879713 | 10.3677626062497
LTR33A_ | ERVL | LTR | 1 | 0.000357909806728704 | 455 | 88970 | 3.59861163193018e-05 | 9.94577474137527
RLTR30 | ERV1 | LTR | 1 | 0.000357909806728704 | 368 | 95382 | 3.85796082586001e-05 | 9.27717576419196
[NAME] | ERV1 | LTR | 1 | 0.000357909806728704 | 513 | 97079 | 3.92660018676127e-05 | 9.11500508596254
L1_Mus4 | L1 | LINE | 65 | 0.0232641374373658 | 9693 | 7193262 | 0.00290949267221776 | 7.99594295579811
MT2A | ERVL | LTR | 29 | 0.0103793843951324 | 12863 | 3303390 | 0.00133613776315633 | 7.76819926907346
MLT2F | ERVL | LTR | 1 | 0.000357909806728704 | 525 | 115805 | 4.68401955755507e-05 | 7.6410826712159
RLTR17 | ERVK | LTR | 9 | 0.00322118826055834 | 2532 | 1062344 | 0.000429691297685876 | 7.49651733210845
MLT1L | MaLR | LTR | 2 | 0.000715819613457409 | 1461 | 259629 | 0.00010501336848223 | 6.81646178770598
[NAME] | MaLR | LTR | 4 | 0.00143163922691482 | 2144 | 523212 | 0.000211626030028712 | 6.76494865362536
ERVL-B4-int | ERVL | LTR | 3 | 0.00107372942018611 | 1313 | 425652 | 0.00017216547581818 | 6.23661285796959
L1M3e | L1 | LINE | 1 | 0.000357909806728704 | 546 | 144220 | 5.83333448979399e-05 | 6.13559547039355
MTEa | MaLR | LTR | 30 | 0.0107372942018611 | 20269 | 4377519 | 0.0017705957954811 | 6.0642266457792
MER89 | ERV1 | LTR | 1 | 0.000357909806728704 | 598 | 146219 | 5.91418898740249e-05 | 6.05171406411039
MLT1A | MaLR | LTR | 6 | 0.00214745884037223 | 4836 | 918468 | 0.000371497092093475 | 5.78055356576489
MLT1A0 | MaLR | LTR | 13 | 0.00465282748747316 | 9959 | 2014049 | 0.000814631916227644 | 5.71157033598589
MLT2D | ERVL | LTR | 2 | 0.000715819613457409 | 1490 | 320898 | 0.000129795130433082 | 5.51499590985396
MER31A | ERV1 | LTR | 1 | 0.000357909806728704 | 671 | 162216 | 6.56122720563321e-05 | 5.45492170155939
MLT1A1 | MaLR | LTR | 8 | 0.00286327845382963 | 8744 | 1321387 | 0.000534467643979018 | 5.35725312109266
[NAME] | MaLR | LTR | 3 | 0.00107372942018611 | 2724 | 495547 | 0.000200436236750377 | 5.35696258118901
MER74A | ERVL | LTR | 1 | 0.000357909806728704 | 697 | 171943 | 6.95465977103486e-05 | 5.1463309279247
[NAME] | L1 | LINE | 77 | 0.0275590551181102 | 21131 | 14052746 | 0.00568398057953921 | 4.84854843053394
L1_Mus3 | L1 | LINE | 84 | 0.0300644237652112 | 20340 | 15359425 | 0.00621249920925697 | 4.83934448159181
RLTR10E | ERVK | LTR | 1 | 0.000357909806728704 | 640 | 188558 | 7.62669452729562e-05 | 4.69285619671484
MLT1D | MaLR | LTR | 9 | 0.00322118826055834 | 7901 | 1731775 | 0.000700459217588613 | 4.59868066501793
MLT1E2 | MaLR | LTR | 2 | 0.000715819613457409 | 1687 | 387698 | 0.00015681404209015 | 4.56476731239345
MTEb | MaLR | LTR | 11 | 0.00393700787401575 | 11670 | 2322556 | 0.00093941520033823 | 4.19091353067127
ERVL-int | ERVL | LTR | 1 | 0.000357909806728704 | 670 | 215313 | 8.70886665511727e-05 | 4.10971738232321
MLT1G1 | MaLR | LTR | 1 | 0.000357909806728704 | 1006 | 216695 | 8.76476506216827e-05 | 4.08350713555992
L1_Mus2 | L1 | LINE | 55 | 0.0196850393700787 | 16245 | 12060606 | 0.00487821030007047 | 4.03529945598991
MLT1B | MaLR | LTR | 8 | 0.00286327845382963 | 8965 | 1825992 | 0.000738567612792116 | 3.8767993670954
RMER10B | ERVL | LTR | 3 | 0.00107372942018611 | 3099 | 735053 | 0.000297310360333278 | 3.61147663667854
L1MEe | L1 | LINE | 1 | 0.000357909806728704 | 1124 | 256014 | 0.00010355119234989 | 3.45635620997351
L1MC4a | L1 | LINE | 3 | 0.00107372942018611 | 3381 | 797592 | 0.000322605805185395 | 3.32830160811602
B4 | B4 | SINE | 38 | 0.0136005726556908 | 61261 | 10404098 | 0.00420819468163893 | 3.23192572697085
RLTR33 | ERVK | LTR | 2 | 0.000715819613457409 | 1511 | 548467 | 0.000221841039218821 | 3.22672313462855
MurERV4_19-int | ERVK | LTR | 2 | 0.000715819613457409 | 882 | 560829 | 0.00022684115577428 | 3.15559851127583
MTEb-int | MaLR | LTR | 1 | 0.000357909806728704 | 626 | 285413 | 0.000115442344802078 | 3.10033382761177
RLTR19 | ERVK | LTR | 1 | 0.000357909806728704 | 967 | 289017 | 0.000116900071712439 | 3.06167311521522
MLT1F1 | MaLR | LTR | 1 | 0.000357909806728704 | 1525 | 325812 | 0.000131782719233723 | 2.71590849551323
RLTR28 | ERVL | LTR | 2 | 0.000715819613457409 | 1931 | 703109 | 0.000284389819704934 | 2.51703670054048
L1MC3 | L1 | LINE | 4 | 0.00143163922691482 | 5010 | 1458483 | 0.000589919510933172 | 2.42683823874576
RLTR19-int | ERVK | LTR | 2 | 0.000715819613457409 | 2306 | 730208 | 0.00029535068028869 | 2.42362608664971
L1MA4A | L1 | LINE | 2 | 0.000715819613457409 | 2494 | 733414 | 0.000296647426258339 | 2.41303159945176
MERVL_2A-int | ERVL | LTR | 5 | 0.00178954903364352 | 3158 | 1835860 | 0.000742558969382415 | 2.40997564830694
MLT2B1 | ERVL | LTR | 1 | 0.000357909806728704 | 1583 | 383951 | 0.000155298475294057 | 2.30465757021119
RNERVK23-int | ERVK | LTR | 1 | 0.000357909806728704 | 634 | 393626 | 0.000159211768262352 | 2.24801100216997
L1MA7 | L1 | LINE | 2 | 0.000715819613457409 | 2963 | 793917 | 0.000321119360569531 | 2.22913876070208
Lx2A1 | L1 | LINE | 3 | 0.00107372942018611 | 2308 | 1209412 | 0.00048917658660177 | 2.19497304162723
RLTR24 | ERV1 | LTR | 1 | 0.000357909806728704 | 1363 | 403858 | 0.000163350353652699 | 2.19105620970776
RMER12B | ERVK | LTR | 1 | 0.000357909806728704 | 1004 | 413782 | 0.00016736436082762 | 2.13850669855179
RLTR12B | ERVK | LTR | 2 | 0.000715819613457409 | 2870 | 904817 | 0.000365975607616969 | 1.95592164767054
L1MC5 | L1 | LINE | 1 | 0.000357909806728704 | 2415 | 484076 | 0.000195796507175254 | 1.82796829163222
[NAME] | L1 | LINE | 1 | 0.000357909806728704 | 2109 | 498629 | 0.000201682827854076 | 1.7746171577268
L1MA4 | L1 | LINE | 4 | 0.00143163922691482 | 6803 | 2006444 | 0.000811555885940938 | 1.76406733253489
ORR1B1 | MaLR | LTR | 8 | 0.00286327845382963 | 13791 | 4053063 | 0.00163936154397503 | 1.74658144468054
L2 | L2 | LINE | 6 | 0.00214745884037223 | 16176 | 3171831 | 0.00128292547275674 | 1.67387653139179
MLT1C | MaLR | LTR | 3 | 0.00107372942018611 | 7398 | 1606500 | 0.000649788646363475 | 1.65242871846901
L1MA9 | L1 | LINE | 2 | 0.000715819613457409 | 4203 | 1129154 | 0.000456714254090198 | 1.56732487993694
RLTR45 | ERVK | LTR | 1 | 0.000357909806728704 | 1342 | 564825 | 0.000228457436777 | 1.56663670825505
MTE-int | MaLR | LTR | 3 | 0.00107372942018611 | 4824 | 1714137 | 0.000693325092381916 | 1.54866660962366
RMER10A | ERVL | LTR | 2 | 0.000715819613457409 | 4200 | 1146001 | 0.0004635284397891 | 1.54428413018864
ETnERV3-int | ERVK | LTR | 1 | 0.000357909806728704 | 685 | 587265 | 0.000237533849615093 | 1.50677390741855
L1MD | L1 | LINE | 2 | 0.000715819613457409 | 5440 | 1242639 | 0.000502616068302809 | 1.42418768240842
L1MB1 | L1 | LINE | 1 | 0.000357909806728704 | 2304 | 623309 | 0.000252112736617598 | 1.4196419091336
L1MC4 | L1 | LINE | 2 | 0.000715819613457409 | 5560 | 1256585 | 0.00050825687282331 | 1.40838157186367
RLTR14-int | ERV1 | LTR | 1 | 0.000357909806728704 | 1591 | 637809 | 0.000257977620135974 | 1.38736765824903
L1_Mus1 | L1 | LINE | 29 | 0.0103793843951324 | 23632 | 18783802 | 0.0075975731560159 | 1.36614471252756
Lx8 | L1 | LINE | 31 | 0.0110952040085898 | 58590 | 20410715 | 0.00825561834494907 | 1.34395796232248
L1ME1 | L1 | LINE | 2 | 0.000715819613457409 | 4854 | 1349911 | 0.000546004881046477 | 1.31101321307873
ORR1E-int | MaLR | LTR | 1 | 0.000357909806728704 | 1509 | 679491 | 0.000274836935640314 | 1.30226239750071
L2c | L2 | LINE | 2 | 0.000715819613457409 | 10971 | 1362735 | 0.000551191864925073 | 1.29867594028209
RLTR16 | ERVK | LTR | 1 | 0.000357909806728704 | 2280 | 682446 | 0.000276032158453886 | 1.29662358448897
RLTR18B | ERVK | LTR | 1 | 0.000357909806728704 | 2254 | 683131 | 0.000276309223640789 | 1.29532341343045
ORR1D2 | MaLR | LTR | 5 | 0.00178954903364352 | 13946 | 3422133 | 0.00138416630547512 | 1.29287140321571
MIRb | MIR | SINE | 7 | 0.00250536864710093 | 37503 | 4852963 | 0.00196290087682666 | 1.27636024655063
RMER6D | ERVK | LTR | 1 | 0.000357909806728704 | 2075 | 708109 | 0.00028641219333196 | 1.24963187692877
L1MB2 | L1 | LINE | 1 | 0.000357909806728704 | 2732 | 717347 | 0.000290148730845254 | 1.23353910832576
Lx2A | L1 | LINE | 1 | 0.000357909806728704 | 1228 | 748462 | 0.000302733961926237 | 1.18225852313165
Lx2 | L1 | LINE | 12 | 0.00429491768074445 | 15765 | 9302619 | 0.00376267426557432 | 1.14145349227802
RLTR40 | ERVK | LTR | 1 | 0.000357909806728704 | 2319 | 795317 | 0.000321685625185098 | 1.11260739898702
HAL1 | L1 | LINE | 1 | 0.000357909806728704 | 3530 | 808797 | 0.00032713794448356 | 1.09406387355561
[NAME] | L1 | LINE | 1 | 0.000357909806728704 | 2729 | 811090 | 0.000328065405028914 | 1.09097088946992
L1MEf | L1 | LINE | 1 | 0.000357909806728704 | 3305 | 841900 | 0.000340527271318649 | 1.05104594220235
RMER6A | ERVK | LTR | 2 | 0.000715819613457409 | 3762 | 1695301 | 0.000685706406454183 | 1.0439155981624
MER21B | ERV1 | LTR | 1 | 0.000357909806728704 | 3357 | 851374 | 0.000344359264867138 | 1.03935001390712
B4A | B4 | SINE | 21 | 0.00751610594130279 | 100681 | 18507093 | 0.00748565135922374 | 1.00406839440118