Spreadsheet: 1778c61a-6703-4f89-b334-d074997d8e78
Sheet: Table S1c

Genomic location and details of BC1 and B2 inserts recovered
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | [NAME] (GRCh37/hg19)
CLONE | SINE | Miniprep | L1/ORF2 | DR length | DR | 5' sequence | Atail | 3' human sequence | Endo Cleavage Site |  |  |  |  |  |  | 5' position (nuc position that corresponds to the last nucleotide from the 5' flank -- closest to the cut site but not exact given uncertainty about direct repeat; this nuc position from the blast is indicated in red in the 5' column) | CHR | Cell line
1 | BC1 | 1 | [NAME] | na | na | GCCACACTAACGTAGCCTCCAGACCGCCCAGTGTGGGTGTGTCCAAGCTCACGTCGCCCGGCGTGGCCCCCCCGCTCCCCAATGACGTAACTGCCCTGCAGCTTCTAGTAGCTTTTCGCAGCGTCTCCGACC | AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | could not be corroborated | . | . | . | . |  | . | . | 50329568 | 14 | HeLa
2 | BC1 | 1, 5, 34, 35, 36, 38 | [NAME] | 14 | AAGATTACAATGCA | TTTATCTATAGCTCCTAATTACCCTGGACACTTTCCGATCCTAAACCTGTGCTGCAATTTCAAACACAAGTGCCTTTCTGAATATTTTTATTACAATTGTGCCTTAC | AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | ATTTAGAGGGTAAATCTATGACACAATCTGCTTCAACCCTAAATTCAGTATAATTGACCTCATCATAGAAGAGGCATTCAGTTATCAGAAACA | T | C | T | T |  | G | T | 96192169 | 12 | HeLa
3 | B2 | 19; 20 | [NAME] | 16 | AAAAATACAAAAAATT | AAAAAAAACAAGCCAGGTATGGTGGCTCATTTCTGTAATCCCAGCATTTTGGGAGGCCAAGGCAGGCGAATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACATGGTGAAACCCCGTGTCGATTAAAAATACAAAAAATT | AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | AGCTGGGCGTGGTAGCGCGCGCCTGTAATCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATAGCTTGAACCTGGGAGGCAGAGGTTGCAGTGAGCCGAGATCGTGCCACTGCACTCCAGCCTGGGCGACAGAGTGAGACTC | T | T | T | T |  | A | A | 151124725 | 1 | HeLa
4 | B2 | 48 | [NAME] | 13 | AAGACTCCCGGTT | GACTCTGGGAACACTCCTGCGACTGGCTGTCACCCGGGAGTCTAACCGGATTAATACTCAGAGATGGATTACGCTGGTTGTCACCAATACGCCTAAAGATTATAATCCAATTTACGCAAATTACAGTCAGTATTAACTTTATCTGCTATTTTAAGACTCCCGGTT | AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACATTACAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | GCCCCGCGCGTCCTCAGAGGACAATCCTCCACGTTCTGATGCAACTCAGTAGGCTGTCAGGAGGGGAAGCCCCCCGAAGAAAACAACTCCAAGCCTGGTCCCCGAGGGTCTGTACCCGGCACTCCCAGGTGTCTTGCTTTCACCTGGGCACCGCTTTATGAAGCTTCCCAGCCGGGGATTACCAAAGCGGAAG | T | C | T | T |  | A | A | 20623400 | 9 | HeLa
5 | B2 | 11, 41 | [NAME] | 15 | AAAAAAGAATGTTCA | ATATTCAGCATTCAAGCATGTTGAGGTGAACTATTCTGAATATATTTTAGAGTGTTAAAATAAGCTACCACAAAGTTAGTTTAAAATTTCAGGTCTTAAAAATAACAGGACAATTTTATGAAGTGTTTGGGCCATTTCAAGAAAAAAAAAGTCCCCTTTAAAAAAGAATGTTCA | AAAAAAAAAAAAAAAAAAAAAAAAAAACATTACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | TTTGTTCCAATTTTTAGTAAAGGCAGGTTTAAAAAAATTATTTCTAAACACCAAATAGTCATTATAGTCAAGGCTTTCAAGTTTAAGGTATTGTCTGCATCACAGTCCTTGAAACAGCCTCTCCTAGCTTTCTTCTAAAACACCTTTAAAAATATGGAAAAACAAGAATGCTCACATCTGCAAA | T | T | T | T |  | A | A | 70268177 | 3 | HeLa
6 | B2 | 13 | [NAME] | 17 | AAGAGGACGAGATTTCG | ATGATAATTTGCTTCTCCTATGCCATTCCTAAACCCAGAGTTTTCTCTGCAGTTCCATCTCCTCTTGAGAAGCTTTTCCCCCTTAGAATGATATTTTGTGTGTTTGTGTTCTCAAGTTTTGCTGATCTTTTCTGTACTTAAGAGGACGATTTCG | AAAAAAAAAAAAAAAAAAAAAAAAAACATTACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | TTCCCCCTTGTACTAGTGTTTGTCATGTAGTGAAATTTTTAGTGAAGGGAGATTCCGAGACTTATCCTGACCCCTGGAAGAACAGGAGAGGAAGAAGTTGGTCTGCCCATGGCCATGGCTGGCGGGTGGGGG | T | C | T | T |  | A | A | 2843712 | 7 | HeLa
7 | B2 | 16, 42 | [NAME] | 14 | AAGAACCATTAGTT | CCTATTACCTTGCACATCTCACAAACAAGGCTGGGGTCTTAGTTTACTTGTAACTACTTAAATATTAGATGCATGAATGGCTGGCTGTCGATAAAAGTCAACTACATCAAAGATGGGTTTTAAAGAAAATGGGTTTTAAAGAAAATGATACTTTAAAGAAAATGTCAAGAACCATTAGTT | AAAAAAAAAAAAAAAAAAAAAAAAACATTACAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | AAGGCAAAAAAACAAAAGTGATGTCATAGAAAGAGAACTAAAGCAGAGTTCACAGTTCTTACTTCCCTTCCCCTGGCTTCACCAGTAGGTAGCTGAATGACCTTTGGCAACCAATTACTTAACCGCCCTCTCTAGACAACAATTTTCTCAACTACAAAACAAAAAAGTTAAACCAGAT | C | C | T | T |  | A | A | 133956392 | 3 | HeLa
 |  |  |  |  |  |  |  | *direct repeat not included so as to represent the preinsertion site
na= not applicable