Spreadsheet: 29fe86e6-eedc-4ab6-9591-4bec008f6dc9
Sheet: Sheet1

Table S9. Transcripts called with the 2peak model across all eleven conditions. | Unnamed: 1 | Unnamed: 2 | Unnamed: 3 | Unnamed: 4 | Unnamed: 5
AFFY ID | MIPS ID | condition | Annotation (Lookup from 2006-07-14)- for multiple identifier mappings only the annotation for the first identifier is shown, except in the case of the multi-line output option | phase | model
244983_at | ATCG00790 | short day | RPL16__chloroplast gene encoding a ribosomal protein L16, which is a constituent of 50S large ribosomal subunit | 9 | 2peak
245346_at | AT4G17090 | short day | BMY8_CT-BMY_BMY8__beta-amylase (CT-BMY) / 1,4-alpha-D-glucan maltohydrolase, identical to beta-amylase enzyme GI:6065749 from (Arabidopsis thaliana) | 8 | 2peak
245393_at | AT4G16260 | short day | glycosyl hydrolase family 17 protein, similar to glucan endo-1,3-beta-glucosidase, basic vacuolar isoform precursor SP:P52407 from (Hevea brasiliensis) | 1 | 2peak
247878_at | AT5G57760 | short day | expressed protein | 0 | 2peak
247878_at | AT5G57770 | short day | expressed protein | 0 | 2peak
248003_at | AT5G56220 | short day | expressed protein | 0 | 2peak
249065_at | AT5G44260 | short day | zinc finger (CCCH-type) family protein, contains [NAME] domain, PF00642: Zinc finger C-x8-C-x5-C-x3-H type (and similar) | 0 | 2peak
250151_at | AT5G14570 | short day | ATNRT2.7__transporter, putative, similar to trans-membrane nitrate transporter protein AtNRT2:1 (Arabidopsis thaliana) GI:3747058, high-affinity nitrate transporter ACH1 (Arabidopsis thaliana) GI:3608362; contains [NAME] profile PF00083: Sugar (and other) transporter | 9 | 2peak
252116_at | AT3G51510 | short day | expressed protein | 6 | 2peak
252957_at | AT4G38680 | short day | GRP2__cold-shock DNA-binding family protein, contains [NAME] domains PF00313: 'Cold-shock' DNA-binding domain and PF00098: Zinc knuckle | 0 | 2peak
253343_at | AT4G33540 | short day | metallo-beta-lactamase family protein | 6 | 2peak
253915_at | AT4G27280 | short day | calcium-binding EF hand family protein, similar to EF-hand Ca2+-binding protein CCD1 (Triticum aestivum) GI:9255753; contains INTERPRO:IPR002048 calcium-binding EF-hand domain | 0 | 2peak
255041_at | AT4G09620 | short day | expressed protein, hypothetical protein F6E13.15 - Arabidopsis thaliana,[NAME]:T00682 | 5 | 2peak
255568_at | AT4G01250 | short day | WRKY22__WRKY family transcription factor, contains [NAME] profile: PF03106 WRKY DNA -binding domain | 0 | 2peak
255631_at | AT4G00710 | short day | protein kinase family protein, low similarity to protein kinase (Arabidopsis thaliana) GI:2852449; contains [NAME] profile: PF00069 Protein kinase domain | 2 | 2peak
255895_at | AT1G17990 | short day | similar to 12-oxophytodienoate reductase ([NAME]) [Arabidopsis thaliana] (TAIR:At1g76690.1); similar to probable 12-oxophytodienoate reductase (EC 1.3.1.42) CPRD8, drought-inducible - cowpea (GB:T11580); contains InterPro domain NADH:flavin oxidoreductase/NADH oxidase (InterPro:IPR001155) | 0 | 2peak
255895_at | AT1G18020 | short day | similar to 12-oxophytodienoate reductase ([NAME]) [Arabidopsis thaliana] (TAIR:At1g76690.1); similar to probable 12-oxophytodienoate reductase (EC 1.3.1.42) CPRD8, drought-inducible - cowpea (GB:T11580); contains InterPro domain NADH:flavin oxidoreductase/NADH oxidase (InterPro:IPR001155) | 0 | 2peak
257049_at | AT3G15250 | short day | similar to protein kinase, putative [Arabidopsis thaliana] (TAIR:At1g53165.1); contains domain SER_RICH (PS50324) | 8 | 2peak
259058_at | AT3G03470 | short day | CYP89A9__cytochrome P450, putative, similar to cytochrome P450 89A2 GB:Q42602 (Arabidopsis thaliana) | 4 | 2peak
259364_at | AT1G13260 | short day | RAV1__DNA-binding protein [NAME] ([NAME]), identical to SP:Q9ZWM9 DNA-binding protein RAV1 {Arabidopsis thaliana}, [NAME] GI:3868857 from (Arabidopsis thaliana) | 11 | 2peak
260915_at | AT1G02660 | short day | lipase class 3 family protein, contains [NAME] profile PF01764: Lipase | 0 | 2peak
262678_at | AT1G75810 | short day | expressed protein | 6 | 2peak
263216_s_at | AT1G30720 | short day | FAD-binding domain-containing protein, similar to SP:P30986 reticuline oxidase precursor (Berberine-bridge-forming enzyme) (BBE) (Tetrahydroprotoberberine synthase) (Eschscholzia californica); contains PF01565 FAD binding domain | 0 | 2peak
263216_s_at | [NAME] | short day | FAD-binding domain-containing protein, similar to SP:P30986 reticuline oxidase precursor (Berberine-bridge-forming enzyme) (BBE) (Tetrahydroprotoberberine synthase) (Eschscholzia californica); contains PF01565 FAD binding domain | 0 | 2peak
263430_at | AT2G22270 | short day | expressed protein | 0 | 2peak
263674_at | AT2G04790 | short day | expressed protein | 5 | 2peak
266291_at | AT2G29300 | short day | tropinone reductase, putative / tropine dehydrogenase, putative, similar to tropinone reductase SP:P50165 from ([NAME] stramonium) | 5 | 2peak
266291_at | AT2G29320 | short day | tropinone reductase, putative / tropine dehydrogenase, putative, similar to tropinone reductase SP:P50165 from ([NAME] stramonium) | 5 | 2peak
267027_at | AT2G38330 | short day | MATE efflux family protein, low similarity to enhanced disease susceptibility 5 (Arabidopsis thaliana) GI:16589070; contains [NAME] profile PF01554: Uncharacterized membrane protein family | 6 | 2peak
267230_at | AT2G44080 | short day | expressed protein | 0 | 2peak
267357_at | AT2G40000 | short day | expressed protein | 0 | 2peak
267452_at | AT2G33860 | short day | ETT_ARF3__auxin-responsive factor (ARF3) / ETTIN protein (ETT), identical to ETTIN GB:AF007788 from (Arabidopsis thaliana) | 6 | 2peak
252975_s_at | AT4G38430 | LDHH_SM | ATROPGEF1_ROPGEF1__Encodes a member of KPP-like gene family, homolog of KPP (kinase partner protein) gene in tomato. Also a member of the [NAME] (guanine nucleotide exchange factor) family, containing the novel PRONE domain (plant-specific Rop nucleotide exchanger), which is exclusively active towards members of the Rop subfamily. | 0 | 2peak
256149_at | AT1G55110 | LDHH_SM | zinc finger (C2H2 type) family protein, contains [NAME] domain, PF00096: Zinc finger, C2H2 type | 0 | 2peak
257115_at | AT3G20150 | LDHH_SM | kinesin motor family protein, contains [NAME] domain, PF00225: Kinesin motor domain | 0 | 2peak
263465_at | AT2G31940 | LDHH_SM | expressed protein | 0 | 2peak
245099_at | AT2G40830 | long day | RHC1A__zinc finger (C3HC4-type RING finger) family protein, contains [NAME] domain, PF00097: Zinc finger, C3HC4 type (RING finger) | 3 | 2peak
245201_at | AT1G67840 | long day | ATP-binding region, ATPase-like domain-containing protein, contains [NAME] profile PF02518: ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein; similar to ESTs gb:AI995396.1, dbj:AV557393.1, and dbj:AV557055.1 | 4 | 2peak
245284_at | AT4G14210 | long day | PDS3_PDE226_PDS__phytoene dehydrogenase, chloroplast / phytoene desaturase (PDS), identical to SP:Q07356 [NAME] dehydrogenase, chloroplast precursor (EC 1.14.99.-) (Phytoene desaturase){Arabidopsis thaliana}; high similarity to phytoene desaturase (Lycopersicon esculentum)(GI:19287) | 4 | 2peak
245290_at | AT4G16490 | long day | armadillo/beta-catenin repeat family protein, contains [NAME] profile: PF00514 armadillo/beta-catenin-like repeat | 3 | 2peak
245323_at | AT4G16500 | long day | cysteine protease inhibitor family protein / [NAME] family protein, similar to SP:Q06445 Cysteine proteinase inhibitor (Cystatin) {Vigna unguiculata}; contains [NAME] profile PF00031: [NAME] domain | 11 | 2peak
245326_at | AT4G14100 | long day | expressed protein | 2 | 2peak
245342_at | AT4G16720 | long day | 60S ribosomal protein L15 (RPL15A) | 10 | 2peak
245386_at | [NAME] | long day | RALFL32__rapid alkalinization factor (RALF) family protein, similar to RALF precursor (Nicotiana tabacum) GI:16566316 | 2 | 2peak
245405_at | AT4G17150 | long day | expressed protein, similar to expressed protein [Arabidopsis thaliana] (TAIR:At3g23540.1); similar to expressed protein [Arabidopsis thaliana] (TAIR:At4g14290.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:XP_464484.1); contains InterPro domain [NAME]/lipase/thioesterase (InterPro:IPR000379) | 10 | 2peak
245528_at | AT4G15530 | long day | similar to pyruvate,orthophosphate dikinase [Flaveria brownii] (GB:CAA55784.1); similar to pyruvate,orthophosphate dikinase [Mesembryanthemum crystallinum] (GB:CAA57872.1); similar to pyruvate,orthophosphate dikinase [Mesembryanthemum crystallinum] (GB:CAA55143.1); similar to cold stable pyruvate, orthophosphate dikinase (GB:AAA86940.1); similar to pyruvate, phosphate dikinase (EC 2.7.9.1) precursor, chloroplast - Flaveria brownii (GB:S56649); contains InterPro domain Pyruvate phosphate dikinase, PEP/pyruvate-binding (InterPro:IPR002192); contains InterPro domain PEP-utilizing enzyme (InterPro:IPR000121); contains InterPro domain PEP-utilising enzyme, mobile region (InterPro:IPR008279) | 5 | 2peak
245624_at | AT4G14090 | long day | UDP-glucoronosyl/UDP-glucosyl transferase family protein, contains [NAME] profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase ;similar to UDP-glucose:anthocyanin 5-O-glucosyltransferase GI:4115563 from (Verbena x hybrida) | 4 | 2peak
245628_at | AT1G56650 | long day | PAP1_MYB75_SIAA1__myb family transcription factor (MYB75), contains [NAME] profile: PF00249 myb-like DNA-binding domain; identical to cDNA putative transcription factor (MYB75) GI:3941507 | 4 | 2peak
245629_at | AT1G56580 | long day | expressed protein, contains [NAME] profile PF04398: Protein of unknown function, DUF538 | 4 | 2peak
245686_at | AT5G22060 | long day | ATJ2__DNAJ heat shock protein, putative, strong similarity to SP:O60884 [NAME] homolog subfamily A member 2 (Dnj3) Homo sapiens, several plant DnaJ proteins from PGR; contains [NAME] profiles PF00226 DnaJ domain, PF00684 DnaJ central domain (4 repeats), PF01556 DnaJ C terminal region | 3 | 2peak
245701_at | AT5G04140 | long day | GLU1_GLS1_GLUS__glutamate synthase (GLU1) / ferredoxin-dependent glutamate synthase (Fd-GOGAT 1), identical to ferredoxin-dependent glutamate synthase precursor (Arabidopsis thaliana) GI:3869251 | 4 | 2peak
245748_at | AT1G51140 | long day | basic helix-loop-helix (bHLH) family protein, contains [NAME] profile: PF00010 helix-loop-helix DNA-binding domain | 3 | 2peak
245765_at | AT1G33600 | long day | leucine-rich repeat family protein, contains leucine rich-repeat (LRR) domains [NAME]:PF00560, INTERPRO:IPR001611; contains similarity to gi:9294355:dbj:BAB02252 (Arabidopsis thaliana) | 9 | 2peak
245768_at | AT1G33590 | long day | disease resistance protein-related / LRR protein-related, contains leucine rich-repeat domains [NAME]:PF00560, INTERPRO:IPR001611; similar to Hcr2-5D (Lycopersicon esculentum) gi:3894393:gb:AAC78596 | 9 | 2peak
245774_at | AT1G30210 | long day | TCP24__TCP family transcription factor, putative, similar to TFPD (GI:6681577) (Arabidopsis thaliana); contains similarity to cyc1A protein GI:6358548 from (Antirrhinum graniticum) | 9 | 2peak
245803_at | AT1G47128 | long day | cysteine proteinase ([NAME]) / thiol protease, identical to SP:P43297 [NAME] proteinase RD21A precursor (EC 3.4.22.-) {Arabidopsis thaliana}, thiol protease RD21A SP:P43297 from (Arabidopsis thaliana) | 4 | 2peak
245832_at | AT1G48850 | long day | EMB1144__similar to 3-phosphoshikimate 1-carboxyvinyltransferase, putative / 5-enolpyruvylshikimate-3-phosphate, putative / EPSP synthase, putative [Arabidopsis thaliana] (TAIR:At1g48860.1); similar to chorismate synthase 1 [Lycopersicon esculentum] (GB:CAA79859.1); contains InterPro domain Chorismate synthase (InterPro:IPR000453) | 4 | 2peak
245855_at | AT5G13550 | long day | SULTR4;1__sulfate transporter family protein, similar to sulfate transporter (Arabidopsis thaliana) GI:3777483; contains [NAME] profiles PF00916: Sulfate transporter family, PF01740: STAS domain | 4 | 2peak
245895_at | AT5G09230 | long day | SRT2__transcriptional regulator Sir2 family protein, contains [NAME] domain PF02146: transcriptional regulator, Sir2 family; | 4 | 2peak
245943_at | AT5G19500 | long day | tryptophan/tyrosine permease family protein, contains [NAME] profile PF03222: Tryptophan/tyrosine permease family | 4 | 2peak
245965_at | AT5G19730 | long day | pectinesterase family protein, contains [NAME] profile: PF01095 pectinesterase | 4 | 2peak
245985_at | AT5G13120 | long day | peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein, contains [NAME] domain, PF00160: peptidyl-prolyl cis-trans isomerase, [NAME] | 4 | 2peak
246021_at | AT5G21100 | long day | L-ascorbate oxidase, putative, similar to L-ascorbate oxidase (Precursor) SP:Q40588 from (Nicotiana tabacum) | 4 | 2peak
246033_at | AT5G08280 | long day | HEMC__hydroxymethylbilane synthase / porphobilinogen deaminase, chloroplast / pre-uroporphyrinogen synthase, identical to SP:Q43316 | 10 | 2peak
246125_at | [NAME] | long day | expressed protein | 3 | 2peak
246126_at | AT5G20070 | long day | ATNUDT19__MutT/nudix family protein, low similarity to SP:Q19427 NADH pyrophosphatase (EC 3.6.1.-) {Caenorhabditis elegans}; contains [NAME] profile PF00293: NUDIX domain | 4 | 2peak
246158_at | AT5G19855 | long day | expressed protein | 4 | 2peak
246184_at | AT5G20950 | long day | glycosyl hydrolase family 3 protein, beta-D-glucan exohydrolase, [NAME] tabacum, EMBL:AB017502 | 10 | 2peak
246302_at | AT3G51860 | long day | CAX3_ATHCX1_CAX1-LIKE_CAX3__cation exchanger, putative ([NAME]), similar to high affinity calcium antiporter CAX1 (Arabidopsis thaliana) gi:9256741:gb:AAB05913; Ca2+:Cation [NAME] (CaCA) Family member PMID:11500563; non-consensus AT-acceptor splice site at intron 1 | 3 | 2peak
246371_at | AT1G51940 | long day | protein kinase family protein / peptidoglycan-binding LysM domain-containing protein, contains protein kinases ATP-binding region signature, PROSITE:PS00107 | 9 | 2peak
246468_at | AT5G17050 | long day | UDP-glucoronosyl/UDP-glucosyl transferase family protein, similar to UDP glucose:flavonoid 3-o-glucosyltransferase, Vitis vinifera, EMBL:AF000372 | 4 | 2peak
246901_at | AT5G25630 | long day | pentatricopeptide (PPR) repeat-containing protein, contains [NAME] profile PF01535: PPR repeat | 4 | 2peak
246944_at | AT5G25450 | long day | ubiquinol-cytochrome C reductase complex 14 kDa protein, putative, similar to SP:P48502 Ubiquinol-cytochrome C reductase complex 14 kDa protein (EC 1.10.2.2) (CR14) {[NAME] tuberosum}; contains [NAME] profile PF02271: Ubiquinol-cytochrome C reductase complex 14kD subunit | 4 | 2peak
246952_at | AT5G04820 | long day | ATOFP13_OFP13__ovate family protein, 62% similar to ovate protein (GI:23429649) (Lycopersicon esculentum); contains TIGRFAM TIGR01568 : uncharacterized plant-specific domain TIGR01568 | 9 | 2peak
246954_at | AT5G04830 | long day | expressed protein | 4 | 2peak
246966_at | AT5G24850 | long day | cryptochrome dash (CRYD), nearly identical to cryptochrome dash (Arabidopsis thaliana) GI:28971609; similar to Deoxyribodipyrimidine photolyase (DNA photolyase) (Photoreactivating enzyme)(SP:Q55081){Synechocystis sp.} | 3 | 2peak
246976_s_at | AT5G24810 | long day | ABC1 family protein, contains [NAME] domain, PF03109: ABC1 family | 3 | 2peak
246990_at | AT5G67360 | long day | ARA12__cucumisin-like serine protease (ARA12), Asp48; almost identical to cucumisin-like serine protease (ARA12) GI:3176874 from (Arabidopsis thaliana) | 2 | 2peak
247285_at | [NAME] | long day | expressed protein, similar to expressed protein [Arabidopsis thaliana] (TAIR:At5g09570.1); similar to unknown protein [Oryza sativa] (GB:XP_469336.1); contains InterPro domain Protein of unknown function DUF657 (InterPro:IPR007017) | 4 | 2peak
247331_at | AT5G63530 | long day | ATFP3__copper chaperone (CCH)-related, low similarity to copper homeostasis factor (GI:3168840); nearly identical to farnesylated protein ATFP3 (GI:4097547); contains [NAME] profile PF00403: Heavy-metal-associated domain | 3 | 2peak
247444_at | AT5G62630 | long day | expressed protein | 8 | 2peak
247486_at | AT5G62140 | long day | expressed protein | 4 | 2peak
247541_at | AT5G61660 | long day | glycine-rich protein | 9 | 2peak
247585_at | AT5G60680 | long day | expressed protein, contains [NAME] profile PF04520: Protein of unknown function, [NAME] | 8 | 2peak
247600_at | AT5G60890 | long day | ATR1_ATMYB34_ATR__receptor-like protein kinase (ATR1) (MYB34), identical to receptor-like protein kinase(ATR1) GI:3150037 from (Arabidopsis thaliana); contains PFAM profile: myb DNA binding domain PF00249; identical to cDNA putative transcription factor (MYB34) mRNA, partial cds GI:3941443 | 5 | 2peak
247689_at | AT5G59770 | long day | similar to protein tyrosine phosphatase-like protein, putative (PAS2) [Arabidopsis thaliana] (TAIR:At5g10480.1); similar to Protein tyrosine phosphatase-like (proline instead of catalytic arginine), member b [Homo sapiens] (GB:AAH49369.1); similar to hypothetical protein [Pongo pygmaeus] (GB:CAH90857.1); similar to Similar to RIKEN cDNA 6330408J20 gene [[NAME] rerio] (GB:AAH44396.1); contains InterPro domain Protein tyrosine phosphatase-like protein, PTPLA (InterPro:IPR007482) | 5 | 2peak
247771_at | AT5G58590 | long day | RANBP1__Ran-binding protein 1, putative / RanBP1, putative, strong similarity to Ran binding proteins from Arabidopsis thaliana atranbp1a (Arabidopsis thaliana) GI:2058282, atranbp1b (Arabidopsis thaliana) GI:2058284; contains [NAME] profile PF00638: RanBP1 domain | 3 | 2peak
247780_at | AT5G58770 | long day | dehydrodolichyl diphosphate synthase, putative / DEDOL-PP synthase, putative, similar to GI:796076 | 4 | 2peak
247813_at | AT5G58330 | long day | malate dehydrogenase (NADP), chloroplast, putative, strong similiarity to chloroplast NADP-dependent malate dehydrogenase (EC 1.1.1.82) SP:O48902 {Medicago sativa}, SP:P21528 {Pisum sativum}, SP:Q05145 {Mesembryanthemum crystallinum}, SP:P46489 {Flaveria bidentis}, (Flaveria trinervia) GI:726334, SP:P17606I {Sorghum bicolor}; contains InterPro entry IPR001236: Lactate/malate dehydrogenase | 4 | 2peak
247864_s_at | AT1G24807 | long day | anthranilate synthase beta subunit, putative, similar to anthranilate synthase beta chain GI:403434; similar to ESTs dbj:AV540153.1, dbj:AV557490.1, gb:AI997696.1, gb:AW004516.1, dbj:AV521371.1 | 5 | 2peak
247864_s_at | AT1G24909 | long day | anthranilate synthase beta subunit, putative, similar to anthranilate synthase beta chain GI:403434; similar to ESTs dbj:AV540153.1, dbj:AV557490.1, gb:AI997696.1, gb:AW004516.1, dbj:AV521371.1 | 5 | 2peak
247864_s_at | [NAME] | long day | anthranilate synthase beta subunit, putative, similar to anthranilate synthase beta chain GI:403434; similar to ESTs dbj:AV540153.1, dbj:AV557490.1, gb:AI997696.1, gb:AW004516.1, dbj:AV521371.1 | 5 | 2peak
247864_s_at | AT1G25155 | long day | anthranilate synthase beta subunit, putative, similar to anthranilate synthase beta chain GI:403434; similar to ESTs dbj:AV540153.1, dbj:AV557490.1, gb:AI997696.1, gb:AW004516.1, dbj:AV521371.1 | 5 | 2peak
247864_s_at | [NAME] | long day | anthranilate synthase beta subunit, putative, similar to anthranilate synthase beta chain GI:403434; similar to ESTs dbj:AV540153.1, dbj:AV557490.1, gb:AI997696.1, gb:AW004516.1, dbj:AV521371.1 | 5 | 2peak
247864_s_at | AT5G57890 | long day | anthranilate synthase beta subunit, putative, similar to anthranilate synthase beta chain GI:403434; similar to ESTs dbj:AV540153.1, dbj:AV557490.1, gb:AI997696.1, gb:AW004516.1, dbj:AV521371.1 | 5 | 2peak
247926_at | AT5G57280 | long day | expressed protein | 10 | 2peak
247936_at | AT5G57030 | long day | LUT2__lycopene epsilon cyclase, identical to lycopene epsilon cyclase ([NAME]) | 3 | 2peak
248091_at | AT5G55120 | long day | expressed protein, strong similarity to unknown protein (pir::T04808) | 4 | 2peak
248148_at | AT5G54930 | long day | similar to AT hook motif-containing protein [Arabidopsis thaliana] (TAIR:At5g52890.1); contains InterPro domain HMG-I and HMG-Y DNA-binding domain (A+T-hook) (InterPro:[NAME]) | 5 | 2peak
248162_at | AT5G54500 | long day | FQR1__quinone reductase, putative, similar to 1,4-benzoquinone reductase (Phanerochaete chrysosporium)(GI:4454993); contains flavodoxin domain PF00258 | 9 | 2peak
248185_at | AT5G54060 | long day | UF3GT__glycosyltransferase family protein, contains [NAME] profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase | 4 | 2peak
248232_at | AT5G53760 | long day | MLO11__similar to seven transmembrane MLO family protein / MLO-like protein 14 (MLO14) [Arabidopsis thaliana] (TAIR:At1g26700.1); similar to seven transmembrane protein Mlo9 [Zea mays] (GB:AAK38345.1); contains InterPro domain Mlo-related protein (InterPro:IPR004326) | 4 | 2peak
248332_at | AT5G52640 | long day | HSP81-1_ATHS83_HSP81-1_HSP81.1_HSP83__heat shock protein 81-1 (HSP81-1) / heat shock protein 83 (HSP83), nearly identical to SP:P27323 Heat shock protein 81-1 (HSP81-1) (Heat shock protein 83) {Arabidopsis thaliana}; contains [NAME] profiles PF02518: ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein, PF00183: Hsp90 protein | 4 | 2peak
248336_at | AT5G52420 | long day | expressed protein | 3 | 2peak
248336_at | AT5G52430 | long day | expressed protein | 3 | 2peak
248440_at | AT5G51260 | long day | acid phosphatase, putative, similar to acid phosphatase-1(1); Apase-1(1) (Lycopersicon esculentum) GI:7705154, acid phosphatase (Glycine max) GI:3341443; contains [NAME] profile PF03767: HAD superfamily (subfamily IIIB) phosphatase | 4 | 2peak
248462_at | AT5G50960 | long day | nucleotide-binding family protein, similar to Nucleotide-binding protein 1 (NBP 1) (SP:Q9R060) (Mus musculus); contains [NAME] PF00991 : ParA family ATPase | 11 | 2peak
248544_at | AT5G50240 | long day | PIMT2__protein-L-isoaspartate O-methyltransferase, putative / PIMT, putative, similar to SP:Q42539 Protein-L-isoaspartate O-methyltransferase (EC 2.1.1.77) ([NAME] beta-aspartate methyltransferase) (PIMT) ([NAME]) (L-isoaspartyl protein carboxyl methyltransferase) {Arabidopsis thaliana}; contains Pfam profile PF01135: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) | 4 | 2peak
248560_at | AT5G49970 | long day | pyridoxamine 5'-phosphate oxidase-related, contains weak similarity to Pyridoxamine 5'-phosphate oxidase (EC 1.4.3.5) (PNP/PMP oxidase) (PNPOx). (Swiss-Prot:P28225) (Shigella flexneri) | 4 | 2peak
248582_at | AT5G49910 | long day | cpHSC70-2_HSC70-7__heat shock protein 70 / HSP70 (HSC70-7), identical to heat shock protein 70 (Arabidopsis thaliana) GI:6746592 | 4 | 2peak
248676_at | AT5G48850 | long day | male sterility [NAME] family protein, similar to male sterility [NAME] (Arabidopsis thaliana) GI:3859112; contains [NAME] profile PF00515 TPR Domain | 4 | 2peak
248764_at | AT5G47640 | long day | CCAAT-box binding transcription factor subunit B (NF-YB) ([NAME] ) (AHAP3) family (Hap3b), similar to CAAT-box DNA binding protein subunit B (NF-YB) (SP:P25209) (GI:22380) ([NAME] mays); contains [NAME] PF00808 : Histone-like transcription factor (CBF/NF-Y) and archaeal histone; identical to cDNA transcription factor Hap3b (Hap3b) mRNA, partial cds GI:9965734 | 3 | 2peak
248764_at | AT5G47650 | long day | CCAAT-box binding transcription factor subunit B (NF-YB) ([NAME] ) (AHAP3) family (Hap3b), similar to CAAT-box DNA binding protein subunit B (NF-YB) (SP:P25209) (GI:22380) ([NAME] mays); contains [NAME] PF00808 : Histone-like transcription factor (CBF/NF-Y) and archaeal histone; identical to cDNA transcription factor Hap3b (Hap3b) mRNA, partial cds GI:9965734 | 3 | 2peak
248838_at | AT5G46800 | long day | BOU__mitochondrial carnitine/acyl carrier, putative / a bout de souffle (BOU) / CAC-like protein, identical to SP:Q93XM7 Mitochondrial carnitine/acylcarnitine carrier-like protein (A BOUT DE SOUFFLE) ([NAME]/acylcarnitine translocase-like protein) (CAC-like protein) {Arabidopsis thaliana}; contains [NAME] profile: PF00153 mitochondrial carrier protein | 4 | 2peak
248986_at | [NAME] | long day | CbbY protein-related, low similarity to SP:P40119 CbbY protein, chromosomal {Alcaligenes eutrophus} | 4 | 2peak
249163_at | AT5G42740 | long day | glucose-6-phosphate isomerase, cytosolic (PGIC), identical to SP:P34795 Glucose-6-phosphate isomerase, cytosolic (EC 5.3.1.9) (GPI) (Phosphoglucose isomerase) (PGI) (Phosphohexose isomerase) (PHI) {Arabidopsis thaliana}; contains [NAME] profile PF00342: glucose-6-phosphate isomerase | 4 | 2peak
249183_at | AT5G42990 | long day | UBC18__ubiquitin-conjugating enzyme 18 (UBC18), E2; identical to gi:2801448 | 4 | 2peak
249191_at | AT5G42760 | long day | expressed protein, similar to hypothetical protein [Streptomyces sp. KO-3988] (GB:BAD86809.1); contains InterPro domain Protein of unknown function DUF142 (InterPro:IPR003455) | 4 | 2peak
249191_at | AT5G42765 | long day | expressed protein, similar to hypothetical protein [Streptomyces sp. KO-3988] (GB:BAD86809.1); contains InterPro domain Protein of unknown function DUF142 (InterPro:IPR003455) | 4 | 2peak
249215_at | AT5G42800 | long day | DFR_M318_TT3__dihydroflavonol 4-reductase (dihydrokaempferol 4-reductase) (DFR), nearly identical to GI:166686 | 4 | 2peak
249278_at | AT5G41900 | long day | hydrolase, alpha/beta fold family protein, low similarity to 2-hydroxy-6-oxo-7-methylocta-2,4-dienoate hydrolase (Pseudomonas putida) GI:2822275; contains [NAME] profile PF00561: hydrolase, alpha/beta fold family | 4 | 2peak
249372_at | AT5G40760 | long day | G6PD6__Encodes a cytosolic glucose-6-phosphate dehydrogenase that is insensitive to reduction by DTT and whose mRNA is expressed ubiquitously. | 4 | 2peak
249544_at | [NAME] | long day | ASF1B_SGA01_SGA1__ASF1-like anti-silencing family protein, similar to SP:[NAME] protein 1 {Saccharomyces cerevisiae}; contains [NAME] profile PF04729: Anti-silencing protein, ASF1-like | 9 | 2peak
249579_at | AT5G37680 | long day | ATARLA1A__ADP-ribosylation factor, putative, ADP-ribosylation factor, Leishmania major, EMBL:LMFP1421 and ADP-ribosylation factor-like protein 1 (ARL1) (SP:P40616) Homo sapiens; contains PF00025: ADP-ribosylation factor family | 3 | 2peak
249622_at | AT5G37550 | long day | expressed protein | 4 | 2peak
249658_s_at | AT5G36700 | long day | phosphoglycolate phosphatase, putative, similar to phosphoglycolate phosphatase precursor ([NAME] reinhardtii) GI:15982558; contains InterPro accession IPR005834: Haloacid dehalogenase-like hydrolase | 4 | 2peak
249658_s_at | AT5G36790 | long day | phosphoglycolate phosphatase, putative, similar to phosphoglycolate phosphatase precursor ([NAME] reinhardtii) GI:15982558; contains InterPro accession IPR005834: Haloacid dehalogenase-like hydrolase | 4 | 2peak
249752_at | AT5G24660 | long day | expressed protein | 4 | 2peak
249754_at | AT5G24530 | long day | oxidoreductase, 2OG-Fe(II) oxygenase family protein, similar to flavanone 3-hydroxylase (Persea americana)(GI:727410); contains PF03171 2OG-Fe(II) oxygenase superfamily domain | 4 | 2peak
249759_at | AT5G24380 | long day | YSL2__similar to transporter, putative [Arabidopsis thaliana] (TAIR:At5g53550.1); similar to oligopeptide transporter OPT family protein [Arabidopsis thaliana] (TAIR:At5g41000.1); similar to oligopeptide transporter OPT family protein [Arabidopsis thaliana] (TAIR:At1g65730.1); similar to oligopeptide transporter OPT family protein [Arabidopsis thaliana] (TAIR:At3g17650.1); similar to transporter, putative [Arabidopsis thaliana] (TAIR:At4g24120.1); similar to OSJNBb0103I08.15 [Oryza sativa (japonica cultivar-group)] (GB:[NAME]); similar to putative iron-phytosiderophore transporter protein yellow stripe 1 [Oryza sativa (japonica cultivar-group)] (GB:XP_467066.1); similar to iron transport protein 1 [Oryza sativa] (GB:AAS49493.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAD90812.1); similar to iron-phytosiderophore transporter protein yellow stripe 1 [[NAME] mays] (GB:[NAME]); contains InterPro domain Oligopeptide transporter OPT superfamily (InterPro:IPR004813) | 4 | 2peak
249759_at | AT5G24390 | long day | YSL2__similar to transporter, putative [Arabidopsis thaliana] (TAIR:At5g53550.1); similar to oligopeptide transporter OPT family protein [Arabidopsis thaliana] (TAIR:At5g41000.1); similar to oligopeptide transporter OPT family protein [Arabidopsis thaliana] (TAIR:At1g65730.1); similar to oligopeptide transporter OPT family protein [Arabidopsis thaliana] (TAIR:At3g17650.1); similar to transporter, putative [Arabidopsis thaliana] (TAIR:At4g24120.1); similar to OSJNBb0103I08.15 [Oryza sativa (japonica cultivar-group)] (GB:[NAME]); similar to putative iron-phytosiderophore transporter protein yellow stripe 1 [Oryza sativa (japonica cultivar-group)] (GB:XP_467066.1); similar to iron transport protein 1 [Oryza sativa] (GB:AAS49493.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAD90812.1); similar to iron-phytosiderophore transporter protein yellow stripe 1 [[NAME] mays] (GB:[NAME]); contains InterPro domain Oligopeptide transporter OPT superfamily (InterPro:IPR004813) | 4 | 2peak
249774_at | AT5G24150 | long day | SQP1__similar to squalene monooxygenase 1,2 / squalene epoxidase 1,2 (SQP1,2) [Arabidopsis thaliana] (TAIR:At5g24160.1); similar to squalene monooxygenase 2 / squalene epoxidase 2 (SQP2) [Arabidopsis thaliana] (TAIR:At5g24140.1); similar to squalene epoxidase homologue [[NAME] napus] (GB:CAA06770.1); contains InterPro domain [NAME] monooxygenase (InterPro:IPR000733); contains InterPro domain NAD-binding site (InterPro:IPR000205); contains InterPro domain Aromatic-ring hydroxylase (InterPro:IPR003042) | 4 | 2peak
249799_at | AT5G23670 | long day | LCB2__similar to serine C-palmitoyltransferase, putative [Arabidopsis thaliana] (TAIR:At3g48780.1); similar to putative serine palmitoyltransferase [Oryza sativa (japonica cultivar-group)] (GB:NP_914892.1); similar to putative serine palmitoyltransferase [Oryza sativa (japonica cultivar-group)] (GB:NP_914893.1); similar to serine palmitoyltransferase [Lotus corniculatus var. japonicus] (GB:BAC55228.1); similar to putative serine palmitoyltransferase [Oryza sativa (japonica cultivar-group)] (GB:[NAME]); similar to putative serine palmitoyltransferase [Oryza sativa (japonica cultivar-group)] (GB:BAD88168.1); contains InterPro domain [NAME], class I and II (InterPro:IPR004839) | 9 | 2peak
249942_at | AT5G22300 | long day | NIT4__nitrilase 4 (NIT4), identical to SP:P46011 Nitrilase 4 (EC 3.5.5.1) {Arabidopsis thaliana} | 4 | 2peak
249964_at | AT5G19010 | long day | MPK16__mitogen-activated protein kinase, putative / MAPK, putative (MPK16), mitogen-activated protein kinase (MAPK)(AtMPK16), PMID:12119167; similar to ATMPK9, Arabidopsis thaliana, EMBL:AB038694 | 10 | 2peak
250083_at | AT5G17220 | long day | ATGSTF12_GST26_TT19__glutathione S-transferase, putative | 4 | 2peak
250128_at | AT5G16540 | long day | ZFN3__zinc finger (CCCH-type) family protein, identical to zinc finger protein 3 (Arabidopsis thaliana) gi:4689376:[NAME]:[NAME]; contains [NAME] domain, PF00642: Zinc finger C-x8-C-x5-C-x3-H type (and similar) | 5 | 2peak
250141_at | AT5G14640 | long day | protein kinase family protein, similar to glycogen synthase kinase-3 homolog MsK-3 SP:P51139 from (Medicago sativa); contains [NAME] profile PF00069: Protein kinase domain | 3 | 2peak
250146_at | AT5G14660 | long day | PDF1B_DEF2__peptide deformylase, chloroplast / polypeptide deformylase 1B (PDF1B), identical to SP:Q9FUZ2 [NAME] deformylase, chloroplast precursor (EC 3.5.1.88) (PDF) (Polypeptide deformylase) {Arabidopsis thaliana}; supporting cDNA gi:11320965:gb:AF269165.1:AF269165 | 4 | 2peak
250222_at | AT5G14050 | long day | transducin family protein / WD-40 repeat family protein, contains 4 WD-40 repeats (PF00400); similar to unknown protein (ref:NP_057085.1) | 10 | 2peak
250278_at | AT5G12860 | long day | DIT1__oxoglutarate/malate translocator, putative, similar to 2-oxoglutarate/malate translocator precursor, spinach, SWISSPROT:Q41364 | 3 | 2peak
250304_at | AT5G12110 | long day | elongation factor 1B alpha-subunit 1 (eEF1Balpha1), identical to elongation factor 1B alpha-subunit (Arabidopsis thaliana) GI:6686819 | 4 | 2peak
250305_at | AT5G12150 | long day | pleckstrin homology (PH) domain-containing protein / RhoGAP domain-containing protein, weak similarity to glucocorticoid receptor DNA binding factor 1 (Canis familiaris) GI:23266717; contains [NAME] profiles PF00169: PH domain, PF00620: RhoGAP domain | 4 | 2peak
250313_at | AT5G12210 | long day | geranylgeranyl transferase type II beta subunit, putative / RAB geranylgeranyltransferase beta subunit, putative, similar to rab geranylgeranyl transferase GB:CAA69383 GI:1552549 from (Homo sapiens) | 10 | 2peak
250317_at | AT5G12250 | long day | TUB6__tubulin beta-6 chain (TUB6), nearly identical to SP:P29514 Tubulin beta-6 chain {Arabidopsis thaliana} | 10 | 2peak
250344_at | AT5G11930 | long day | glutaredoxin family protein, contains INTERPRO Domain IPR002109, [NAME] (thioltransferase) | 4 | 2peak
250357_at | [NAME] | long day | expressed protein, contains [NAME] profile PF03267: Arabidopsis protein of unknown function, DUF266 | 11 | 2peak
250422_at | AT5G10830 | long day | endomembrane protein 70, putative, TM4 family; | 10 | 2peak
250422_at | AT5G10840 | long day | endomembrane protein 70, putative, TM4 family; | 10 | 2peak
250429_at | AT5G10470 | long day | kinesin motor protein-related, TH65 protein, Arabidopsis thaliana, EMBL:AJ001729; contains [NAME] profile PF00225: Kinesin motor domain | 4 | 2peak
250444_at | AT5G10560 | long day | glycosyl hydrolase family 3 protein, beta-xylosidase, Aspergllus nidulans, EMBL:ANXLND | 10 | 2peak
250496_at | AT5G09650 | long day | inorganic pyrophosphatase family protein, similar to SP:Q15181 Inorganic pyrophosphatase (EC 3.6.1.1) (Pyrophosphate {Homo sapiens}; contains [NAME] profile PF00719: inorganic pyrophosphatase | 4 | 2peak
250498_at | AT5G09660 | long day | PMDH2__similar to malate dehydrogenase, glyoxysomal, putative [Arabidopsis thaliana] (TAIR:At2g22780.1); similar to malate dehydrogenase 1 [[NAME] napus] (GB:CAB43994.1); contains InterPro domain Malate dehydrogenase, active site (InterPro:IPR001252); contains InterPro domain Lactate/malate dehydrogenase (InterPro:IPR001236) | 5 | 2peak
250531_at | AT5G08650 | long day | GTP-binding protein LepA, putative | 4 | 2peak
250582_at | AT5G07580 | long day | encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. | 9 | 2peak
250794_at | AT5G05270 | long day | chalcone-flavanone isomerase family protein, contains very low similarity to chalcone-flavonone isomerase (chalcone isomerase), GI:1705761 from Vitis vinifera; contains [NAME] profile PF02431: Chalcone-flavanone isomerase | 4 | 2peak
250886_at | AT5G04440 | long day | expressed protein | 4 | 2peak
250900_at | AT5G03470 | long day | ATB' ALPHA__serine/threonine protein phosphatase 2A ([NAME]) regulatory subunit B' (B'alpha), similar to SWISS-PROT:Q28653 serine/threonine protein phosphatase 2A, 56 [NAME] regulatory subunit, delta isoform ([NAME], B subunit, B' delta isoform, [NAME], B subunit, B56 delta isoform, [NAME], B subunit, PR61 delta isoform, [NAME], B subunit, R5 delta isoform, [NAME], B subunit, B'-gamma) (Oryctolagus cuniculus); contains [NAME] domain, PF01603: Protein phosphatase 2A regulatory B subunit (B56 family) | 9 | 2peak
250985_at | AT5G02830 | long day | pentatricopeptide (PPR) repeat-containing protein, contains [NAME] profile PF01535: PPR repeat | 4 | 2peak
251022_at | AT5G02150 | long day | similar to armadillo/beta-catenin repeat family protein [Arabidopsis thaliana] (TAIR:At3g09350.1); similar to Zgc:55259 protein [[NAME] rerio] (GB:AAH49402.1) | 9 | 2peak
251091_at | [NAME] | long day | ATPDX1.3_PDX1__Encodes a protein predicted to function in tandem with [NAME] to form glutamine amidotransferase complex with involved in vitamin [NAME] biosynthesis. | 4 | 2peak
251110_at | AT5G01260 | long day | glycoside hydrolase starch-binding domain-containing protein, low similarity to SP:P31797 [NAME] glucanotransferase precursor (EC 2.4.1.19) (Cyclodextrin-glycosyltransferase) (CGTase) {Bacillus stearothermophilus}; contains [NAME] profile PF00686: Starch binding domain | 4 | 2peak
251118_at | AT3G63410 | long day | APG1_VTE3__chloroplast inner envelope membrane protein, putative (APG1), similar to SP:P23525 37 [NAME] inner envelope membrane protein, chloroplast precursor (E37) {[NAME] oleracea}; contains [NAME] profile PF01209: methlytransferase, UbiE/COQ5 family | 4 | 2peak
251142_at | AT5G01015 | long day | expressed protein | 4 | 2peak
251183_at | AT3G62630 | long day | expressed protein | 9 | 2peak
251276_at | AT3G61740 | long day | PHD finger family protein (ATX3), contains [NAME] domains PF00628: PHD-finger and PF00855: PWWP domain; identical to cDNA trithorax 3 (ATX3) partial cds GI:15217142 | 4 | 2peak
251301_at | [NAME] | long day | CYP78A9__cytochrome P450, putative, similar to cytochrome p450 SP:O48927 from (Arabidopsis thaliana) | 4 | 2peak
251309_at | AT3G61220 | long day | short-chain dehydrogenase/reductase (SDR) family protein, similar to carbonyl reductase GI:1049108 from (Mus musculus) | 4 | 2peak
251346_at | AT3G60980 | long day | pentatricopeptide (PPR) repeat-containing protein, contains [NAME] profile PF01535: PPR repeat | 9 | 2peak
251408_at | AT3G60340 | long day | palmitoyl protein thioesterase family protein, palmitoyl-protein thioesterase precursor, Mus musculus, EMBL:AF071025 | 7 | 2peak
251558_at | AT3G57810 | long day | OTU-like cysteine protease family protein, contains [NAME] profile PF02338: OTU-like cysteine protease | 4 | 2peak
251658_at | AT3G57020 | long day | similar to strictosidine synthase family protein [Arabidopsis thaliana] (TAIR:At3g57010.1); similar to putative strictosidine synthase [Lycopersicon esculentum] (GB:AAF75751.1); contains InterPro domain Strictosidine synthase (InterPro:IPR004141) | 4 | 2peak
251722_at | AT3G56200 | long day | amino acid transporter family protein, low similarity to N system amino acids transporter [NAME] (Mus musculus) GI:7406950; belongs to INTERPRO:IPR002422 amino acid/polyamine transporter, family II | 4 | 2peak
251800_at | AT3G55510 | long day | expressed protein | 9 | 2peak
251802_at | AT3G55380 | long day | UBC14__ubiquitin-conjugating enzyme 14 (UBC14), E2; UbcAT3; identical to [NAME], S46656 | 9 | 2peak
251848_at | AT3G54620 | long day | BZO2H4__bZIP transcription factor family protein, contains [NAME] profile: PF00170 bZIP transcription factor | 7 | 2peak
251885_at | AT3G54050 | long day | fructose-1,6-bisphosphatase, putative / D-fructose-1,6-bisphosphate 1-phosphohydrolase, putative / FBPase, putative, strong similarity to fructose-1,6-bisphosphatase ([NAME] napus) GI:289367; identical to SP:P25851 Fructose-1,6-bisphosphatase, chloroplast precursor (EC 3.1.3.11) (D-fructose-1,6-bisphosphate 1-phosphohydrolase) (FBPase) {Arabidopsis thaliana}; contains [NAME] profile PF00316: fructose-1,6-bisphosphatase | 4 | 2peak
251896_at | AT3G54390 | long day | expressed protein, similar to 6b-interacting protein 1 (NtSIP1) (Nicotiana tabacum) GI:18149189 | 4 | 2peak
252038_at | AT3G52120 | long day | SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / D111/G-patch domain-containing protein, contains [NAME] profiles PF01585: G-patch domain, PF01805: Surp module | 4 | 2peak
252120_at | AT3G51130 | long day | expressed protein, contains [NAME] PF03676: Uncharacterised protein family (UPF0183) | 4 | 2peak
252123_at | AT3G51240 | long day | F3H_F3'H_TT6__naringenin 3-dioxygenase / flavanone 3-hydroxylase (F3H), identical to GI:3790548 | 4 | 2peak
252147_at | AT3G51270 | long day | RIO1 family protein, contains [NAME] profile PF01163: RIO1 family | 10 | 2peak
252315_at | AT3G48690 | long day | expressed protein, similar to PrMC3 (Pinus radiata) GI:5487873 | 3 | 2peak
252323_at | AT3G48530 | long day | CBS domain-containing protein, low similarity to SP:Q9UGI9 5'-AMP-activated protein kinase, gamma-3 subunit (AMPK gamma-3 chain) (AMPK gamma3) {Homo sapiens}; contains [NAME] profile [NAME]: CBS domain | 10 | 2peak
252353_at | AT3G48200 | long day | expressed protein | 4 | 2peak
252411_at | AT3G47430 | long day | peroxisomal biogenesis factor 11 family protein / PEX11 family protein, contains Pfam PF05648: Peroxisomal biogenesis factor 11 (PEX11) | 4 | 2peak
252415_at | AT3G47340 | long day | ASN1_DIN6__asparagine synthetase 1 (glutamine-hydrolyzing) / glutamine-dependent asparagine synthetase 1 (ASN1), identical to SP:P49078 Asparagine synthetase (glutamine-hydrolyzing) (EC 6.3.5.4) (Glutamine- dependent asparagine synthetase) {Arabidopsis thaliana} | 8 | 2peak
252543_at | AT3G45780 | long day | PHOT1_JK224_NPH1_RPT1__similar to protein kinase family protein / non phototropic hypocotyl 1-like protein (NPL1) [Arabidopsis thaliana] (TAIR:At5g58140.1); similar to protein kinase family protein / non phototropic hypocotyl 1-like protein (NPL1) [Arabidopsis thaliana] (TAIR:At5g58140.2); similar to protein kinase family protein / non phototropic hypocotyl 1-like protein (NPL1) [Arabidopsis thaliana] (TAIR:At5g58140.4); similar to protein kinase family protein / non phototropic hypocotyl 1-like protein (NPL1) [Arabidopsis thaliana] (TAIR:At5g58140.3); similar to phototropin [Vicia faba] (GB:BAC23099.1); similar to phototropin 1 [Pisum sativum] (GB:AAM15725.1); similar to phototropin-like protein PsPK4 [Pisum sativum] (GB:AAB41023.2); similar to phototropin [Vicia faba] (GB:BAC23098.1); similar to phototropin [Phaseolus vulgaris] (GB:BAD89966.1); contains InterPro domain [NAME]/threonine protein kinase, active site (InterPro:IPR008271); contains InterPro domain Tyrosine protein kinase (InterPro:IPR001245); contains InterPro domain PAS domain (InterPro:IPR000014); contains InterPro domain [NAME]/threonine protein kinase (InterPro:IPR002290); contains InterPro domain Protein kinase (InterPro:IPR000719); contains InterPro domain PAC motif (InterPro:IPR001610) | 8 | 2peak
252573_at | AT3G45260 | long day | zinc finger (C2H2 type) family protein, contains [NAME] domain, PF00096: Zinc finger, C2H2 type | 8 | 2peak
252629_at | AT3G44970 | long day | cytochrome P450 family protein, similar to Cytochrome P450 85 (SP:[NAME]) {Lycopersicon esculentum}; contains [NAME] profile: PF00067 cytochrome P450 | 4 | 2peak
252863_at | AT4G39800 | long day | MI-1-P SYNTHASE__inositol-3-phosphate synthase isozyme 1 / myo-inositol-1-phosphate synthase 1 / MI-1-P synthase 1 / IPS 1, identical to SP:P42801 Inositol-3-phosphate synthase isozyme 1 (EC 5.5.1.4) (Myo-inositol-1- phosphate synthase 1) (MI-1-P synthase 1) (IPS 1) {Arabidopsis thaliana} | 3 | 2peak
252900_at | AT4G39540 | long day | shikimate kinase family protein, similar to shikimate kinase precursor from Lycopersicon esculentum (SP:Q00497); contains [NAME] shikimate kinase domain PF01202 | 4 | 2peak
252915_at | AT4G38810 | long day | calcium-binding EF hand family protein, contains INTERPRO:IPR002048 calcium-binding EF-hand domain | 4 | 2peak
252943_at | AT4G39330 | long day | similar to mannitol dehydrogenase, putative [Arabidopsis thaliana] (TAIR:At2g21730.1); similar to mannitol dehydrogenase, putative [Arabidopsis thaliana] (TAIR:At2g21890.1); similar to putative sinapyl alcohol dehydrogenase [Populus tremula x Populus tremuloides] (GB:AAM95578.1); contains InterPro domain Zinc-containing alcohol dehydrogenase superfamily (InterPro:IPR002085) | 4 | 2peak
253049_at | AT4G37300 | long day | expressed protein | 9 | 2peak
253090_at | AT4G36360 | long day | BGAL3__beta-galactosidase, putative / lactase, putative, similar to beta-galactosidase precursor SP:P48980 from (Lycopersicon esculentum) | 4 | 2peak
253387_at | AT4G33010 | long day | glycine dehydrogenase (decarboxylating), putative / glycine decarboxylase, putative / glycine cleavage system P-protein, putative, strong similarity to SP:P49361 Glycine dehydrogenase (decarboxylating) A, mitochondrial precursor (EC 1.4.4.2) {Flaveria pringlei}; contains [NAME] profile PF02347: Glycine cleavage system P-protein | 4 | 2peak
253388_at | AT4G32910 | long day | expressed protein | 10 | 2peak
253407_at | AT4G32920 | long day | glycine-rich protein | 4 | 2peak
253427_at | AT4G32390 | long day | phosphate translocator-related, low similarity to phosphoenolpyruvate/phosphate translocator precursor (Mesembryanthemum crystallinum) GI:9295275, SP:P52178 Triose phosphate/phosphate translocator, non-green plastid, chloroplast precursor (CTPT) {[NAME] oleracea} | 11 | 2peak
253483_at | AT4G31910 | long day | transferase family protein, low similarity to anthranilate N-hydroxycinnamoyl/benzoyltransferase [NAME] caryophyllus GI:3288180, 10-deacetylbaccatin III-10-O-acetyl transferase Taxus cuspidata GI:6746554; contains [NAME] profile PF02458 transferase family | 11 | 2peak
253525_at | AT4G31330 | long day | expressed protein, contains [NAME] profile PF04654: Protein of unknown function, DUF599 | 4 | 2peak
253546_at | AT4G31040 | long day | proton extrusion protein-related, contains weak similarity to Proton extrusion protein pcxA (Swiss-Prot:P75028) (Synechocystis sp.) | 9 | 2peak
253558_at | AT4G31120 | long day | Skb1 methyltransferase family protein, contains [NAME] profile: PF05185 Skb1 methyltransferase | 9 | 2peak
253630_at | AT4G30490 | long day | AFG1-like ATPase family protein, contains [NAME] profile: PF03969 [NAME]-like ATPase | 3 | 2peak
253712_at | AT4G29330 | long day | Der1-like family protein / degradation in the ER-like family protein, contains [NAME] profile: PF04511 Der1-like family | 2 | 2peak
253765_at | AT4G28740 | long day | expressed protein | 4 | 2peak
253790_at | AT4G28660 | long day | photosystem II reaction centre W (PsbW) family protein, contains [NAME] profile: PF03912 photosystem II reaction centre W protein, PsbW | 4 | 2peak
253803_at | AT4G28200 | long day | expressed protein | 10 | 2peak
253842_at | AT4G27860 | long day | integral membrane family protein, contains [NAME] PF01988: Integral membrane protein | 4 | 2peak
253871_at | AT4G27440 | long day | PORB__similar to protochlorophyllide reductase A, chloroplast / PCR A / NADPH-protochlorophyllide oxidoreductase A (PORA) [Arabidopsis thaliana] (TAIR:At5g54190.1); similar to NADPH-protochlorophyllide oxidoreductase [Cucumis sativus] (GB:BAA21089.1); similar to protochlorophyllide reductase (EC 1.3.1.33) precursor - garden pea (GB:S20941); similar to protochlorophyllide reductase [Pisum sativum] (GB:CAA44786.1); similar to NADPH:protochlorophyllide oxidoreductase [[NAME] tabacum] (GB:BAB93003.1); similar to NADPH:protochlorophyllide oxidoreductase [[NAME] carota] (GB:AAF20949.1); contains InterPro domain [NAME]/ribitol dehydrogenase (InterPro:IPR002347); contains InterPro domain Light-dependent protochlorophyllide reductase (InterPro:IPR005979); contains InterPro domain Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198) | 9 | 2peak
253922_at | AT4G26850 | long day | VTC2__expressed protein | 4 | 2peak
253946_at | AT4G26790 | long day | GDSL-motif lipase/hydrolase family protein, similar to family II lipase EXL3 (GI:15054386), [NAME] (GI:15054382), EXL2 (GI:15054384) (Arabidopsis thaliana); contains [NAME] profile PF00657: Lipase/Acylhydrolase with GDSL-like motif | 4 | 2peak
254041_at | AT4G25830 | long day | integral membrane family protein, contains TIGRFAM TIGR01569 : plant integral membrane protein TIGR01569; contains [NAME] PF04535 : Domain of unknown function (DUF588) | 4 | 2peak
254118_at | AT4G24790 | long day | expressed protein, ; expression supported by MPSS | 4 | 2peak
254137_at | AT4G24930 | long day | thylakoid lumenal 17.9 kDa protein, chloroplast, SP:Q9SW33;GI:17369630;PMID:11719511; similar to expressed protein gi:12321169 {Oryza sativa} | 4 | 2peak
254148_at | AT4G24280 | long day | CPHSC70-1__heat shock protein 70, putative / HSP70, putative, strong similarity to heat shock protein 70 (Arabidopsis thaliana) GI:6746592; similar to heat shock 70 protein - Spinacia oleracea,PID:g2654208 | 4 | 2peak
254259_s_at | AT4G23420 | long day | short-chain dehydrogenase/reductase (SDR) family protein, similar to WW-domain oxidoreductase (Mus musculus) GI:6934274, WW domain-containing oxidoreductase isoform [NAME] (Homo sapiens) GI:15667686; contains [NAME] PF00106: oxidoreductase, short chain dehydrogenase/reductase family | 4 | 2peak
254283_s_at | AT4G22870 | long day | [NAME], putative / anthocyanidin synthase, putative, similar to SP:P51091 (Malus domestica); contains [NAME] domain PF03171, 2OG-Fe(II) oxygenase superfamily | 4 | 2peak
254333_at | AT4G22753 | long day | SMO1-3_ATSMO1_SMO1__sterol desaturase family protein, similar to sterol 4-alpha-methyl-oxidase GI:16973471 from (Arabidopsis thaliana); contains [NAME] profile PF01598: Sterol desaturase | 4 | 2peak
254351_at | AT4G22300 | long day | phospholipase/carboxylesterase family protein, similar to acyl-protein thioesterase-1 (Homo sapiens) GI:9965372; contains [NAME] profile PF02230: Phospholipase/Carboxylesterase family | 9 | 2peak
254371_at | AT4G21760 | long day | glycosyl hydrolase family 1 protein, contains Pfam PF00232 : Glycosyl hydrolase family 1 domain; TIGRFAM TIGR01233: 6-phospho-beta-galactosidase; similar to dalcochinin 8'-O-beta-glucoside beta-glucosidase precursor (GI:6118076) ([NAME] cochinchinensis) | 4 | 2peak
254429_at | AT4G21105 | long day | expressed protein | 4 | 2peak
254577_at | AT4G19450 | long day | nodulin-related, weak similarity to nodule-specific protein [NAME] (Lotus japonicus) GI:3329366 | 3 | 2peak
254691_at | AT4G17840 | long day | expressed protein | 4 | 2peak
254715_at | AT4G13550 | long day | lipase class 3 family protein, very low similarity to diacylglycerol lipase (Aspergillus oryzae) GI:1772352; contains [NAME] profiles PF01764: [NAME] (class 3), PF00168: C2 domain | 4 | 2peak
254740_s_at | AT4G13890 | long day | SHM5__glycine hydroxymethyltransferase, putative / serine hydroxymethyltransferase, putative / serine/threonine aldolase, putative, similar to serine hydroxymethyltransferase ([NAME] reinhardtii) GI:17066746; contains [NAME] profile PF00464: serine hydroxymethyltransferase | 3 | 2peak
254878_at | AT4G11660 | long day | AT-HSFB2B_HSFB2B__heat shock factor protein 7 (HSF7) / heat shock transcription factor 7 (HSTF7), identical to heat shock factor protein 7 (HSF7) SP:[NAME] from (Arabidopsis thaliana) | 3 | 2peak
254892_at | AT4G11800 | long day | calcineurin-like phosphoesterase family protein, contains [NAME] profile: PF00149 calcineurin-like phosphoesterase | 5 | 2peak
254918_at | AT4G11260 | long day | SGT1B_EDM1_ETA3_RPR1_SGT1A__phosphatase-related, low similarity to protein phosphatase T (Saccharomyces cerevisiae) GI:897806; contains [NAME] profiles PF00515: [NAME], PF05002: SGS domain, PF04969: CS domain | 9 | 2peak
255056_at | AT4G09820 | long day | TT8__similar to basic helix-loop-helix (bHLH) family protein [Arabidopsis thaliana] (TAIR:At1g63650.2); similar to basic helix-loop-helix (bHLH) family protein [Arabidopsis thaliana] (TAIR:At1g63650.1); similar to anthocyanin 1 [Petunia x hybrida] (GB:AAG25928.1); contains InterPro domain Basic helix-loop-helix dimerization domain bHLH (InterPro:IPR001092) | 4 | 2peak
255088_at | AT4G09350 | long day | DNAJ heat shock N-terminal domain-containing protein, similar to SP:Q45552 Chaperone protein dnaJ {Bacillus stearothermophilus}; contains [NAME] profile PF00226: DnaJ domain | 4 | 2peak
255225_at | [NAME] | long day | U3-55K-LIKE__transducin family protein / WD-40 repeat family protein, contains 6 WD-40 repeats (PF00400); [NAME]associated 55-kDa protein, Homo sapiens, gb:NP_004695; Vegetatible incompatibility protein HET-E-1 (SP:Q00808) (Podospora anserina) | 10 | 2peak
255604_at | [NAME] | long day | expressed protein | 4 | 2peak
255622_at | AT4G01070 | long day | the glycosyltransferase (UGT72B1) is involved in metabolizing [NAME] (chloroaniline and chlorophenole). Comparison between wild type and knock-out mutant demonstrates the central role of this gene for metabolizing chloroaniline but significantly less for chlorophenole. The glucosyltransferase preferred UDP-xylose over UDP-glucose indicating its (additional) functioning as a xylosyltransferase in planta | 3 | 2peak
255785_at | AT1G19920 | long day | APS2_ASA1__sulfate adenylyltransferase 2 / ATP-sulfurylase 2 (ASA1) (MET3-1) ([NAME]), identical to ATP sulfurylase (APS2) (Arabidopsis thaliana) GI:1575324 | 3 | 2peak
255942_at | AT1G22360 | long day | similar to UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis thaliana] (TAIR:At1g22380.1); similar to UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis thaliana] (TAIR:At1g22340.1); similar to UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis thaliana] (TAIR:At1g22400.1); similar to UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis thaliana] (TAIR:At1g22370.2); similar to glycosyltransferase NTGT5a [[NAME] tabacum] (GB:BAD93689.1); contains InterPro domain UDP-glucoronosyl/UDP-glucosyl transferase (InterPro:IPR002213) | 9 | 2peak
255957_at | AT1G22160 | long day | senescence-associated protein-related, similar to senescence-associated protein SAG102 (GI:22331931) (Arabidopsis thaliana) | 4 | 2peak
256015_at | AT1G19150 | long day | [NAME]*1__chlorophyll A-B binding protein, putative / LHCI type II, putative, very strong similarity to PSI type II chlorophyll a/b-binding protein Lhca2*1 GI:541565 from (Arabidopsis thaliana); contains [NAME] profile: PF00504 chlorophyll A-B binding protein | 4 | 2peak
256185_at | AT1G51700 | long day | ADOF1__Dof-type zinc finger domain-containing protein (ADOF1), identical to cDNA adof1 mRNA for dof zinc finger protein, GI:3608260; contains [NAME] profile PF02701: Dof domain, zinc finger | 4 | 2peak
256321_at | AT1G55020 | long day | LOX1__lipoxygenase ([NAME]), identical to SP:Q06327 | 3 | 2peak
256336_at | AT1G72030 | long day | GCN5-related N-acetyltransferase (GNAT) family protein, contains [NAME] profile PF00583: acetyltransferase, GNAT family | 4 | 2peak
256424_at | AT1G33490 | long day | expressed protein | 4 | 2peak
256525_at | AT1G66180 | long day | aspartyl protease family protein, contains [NAME] PF00026: Eukaryotic aspartyl protease profile; similar to CND41, chloroplast nucleoid DNA binding protein (GI:2541876) (Nicotiana tabacum) | 9 | 2peak
256567_at | AT3G19553 | long day | amino acid permease family protein, weak similarity to aspartate/glutamate transporter 1 (Mus musculus) GI:21322754; contains [NAME] profile PF00324: Amino acid permease | 8 | 2peak
256603_at | AT3G28270 | long day | expressed protein, similar to [NAME] (GI:11994571 and GI:11994573) (Arabidopsis thaliana) | 4 | 2peak
256673_at | AT3G52370 | long day | beta-Ig-H3 domain-containing protein / fasciclin domain-containing protein, weak similarity to osteoblast specific factor 2 (Homo sapiens) GI:393319; contains [NAME] profile PF02469: Fasciclin domain; supporting cDNA gi:26450295:dbj:AK117608.1: | 4 | 2peak
256880_at | AT3G26450 | long day | major latex protein-related / MLP-related, low similarity to major latex protein {[NAME] somniferum}(GI:294060) ; contains [NAME] profile PF00407: Pathogenesis-related protein Bet v I family | 4 | 2peak
256924_at | [NAME] | long day | transferase family protein, similar to anthocyanin 5-aromatic acyltransferase from [NAME], malonyl CoA:anthocyanin 5-O-glucoside-6'''-O-malonyltransferase from [NAME] frutescens GI:17980232, Salvia splendens GI:17980234; contains [NAME] profile PF02458 transferase family | 4 | 2peak
256927_at | AT3G22550 | long day | senescence-associated protein-related, similar to senescence-associated protein SAG102 (GI:22331931) (Arabidopsis thaliana) | 4 | 2peak
256983_at | AT3G13470 | long day | chaperonin, putative, similar SWISS-PROT:P21240- RuBisCO subunit binding-protein beta subunit, chloroplast precursor (60 kDa chaperonin beta subunit, CPN-60 beta) (Arabidopsis thaliana); contains [NAME]:PF00118 domain, TCP-1/cpn60 chaperonin family | 4 | 2peak
256997_at | AT3G14067 | long day | subtilase family protein, contains similarity to cucumisin-like serine protease GI:3176874 from (Arabidopsis thaliana) | 3 | 2peak
257129_at | AT3G20080 | long day | CYP705A19__cytochrome P450 family protein, similar to Cytochrome P450 93A3 (P450 CP5) (SP:O81973) (Glycine [NAME]); contains [NAME] profile: PF00067 cytochrome P450; supported by full-length cDNA: Ceres:149380. | 3 | 2peak
257129_at | AT3G20100 | long day | CYP705A19__cytochrome P450 family protein, similar to Cytochrome P450 93A3 (P450 CP5) (SP:O81973) (Glycine [NAME]); contains [NAME] profile: PF00067 cytochrome P450; supported by full-length cDNA: Ceres:149380. | 3 | 2peak
257253_at | AT3G24190 | long day | ABC1 family protein, contains [NAME] domain, PF03109: ABC1 family | 4 | 2peak
257266_at | AT3G15010 | long day | RNA recognition motif (RRM)-containing protein, similar to UBP1 interacting protein 1a (Arabidopsis thaliana) [NAME]; contains [NAME] profile: PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 10 | 2peak
257519_at | AT3G01210 | long day | similar to RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] (TAIR:At1g14340.1); similar to hypothetical protein [Solanum demissum] (GB:AAT40482.1); contains InterPro domain RNA-binding region RNP-1 (RNA recognition motif) (InterPro:IPR000504) | 4 | 2peak
257533_at | AT3G10840 | long day | hydrolase, alpha/beta fold family protein, low similarity to hydrolase (Terrabacter sp. DBF63) GI:14196240; contains [NAME] profile: PF00561 alpha/beta hydrolase fold | 3 | 2peak
257658_at | AT3G13230 | long day | expressed protein | 9 | 2peak
257876_at | AT3G17130 | long day | invertase/pectin methylesterase inhibitor family protein, contains [NAME] profile PF04043: Plant invertase/pectin methylesterase inhibitor | 4 | 2peak
257883_at | AT3G16940 | long day | calmodulin-binding protein, similar to anther ethylene-upregulated protein ER1 GI:11612392 from (Nicotiana tabacum); contains [NAME] profile: PF00612 IQ calmodulin-binding motif (3 copies) | 4 | 2peak
258023_at | AT3G19450 | long day | ATCAD4_CAD4_CAD-C__cinnamyl-alcohol dehydrogenase (CAD), identical to SP:P48523 Cinnamyl-alcohol dehydrogenase (EC 1.1.1.195) (CAD) (Arabidopsis thaliana) | 4 | 2peak
258081_at | AT3G26085 | long day | CAAX amino terminal protease family protein, contains [NAME] profile PF02517 CAAX amino terminal protease family protein | 4 | 2peak
258119_at | AT3G14720 | long day | ATMPK19__mitogen-activated protein kinase, putative / MAPK, putative (MPK19), identical to mitogen-activated protein kinase (MAPK)(AtMPK19), PMID:12119167; | 4 | 2peak
258133_at | AT3G24500 | long day | ATMBF1C_MBF1C__ethylene-responsive transcriptional coactivator, putative, similar to ethylene-responsive transcriptional coactivator (Lycopersicon esculentum) gi:5669634:[NAME]:AAD46402 | 3 | 2peak
258156_at | AT3G18050 | long day | expressed protein | 9 | 2peak
258176_at | AT3G21650 | long day | serine/threonine protein phosphatase 2A ([NAME]) regulatory subunit B', putative, similar to SWISS-PROT:Q28653 serine/threonine protein phosphatase 2A, 56 [NAME] regulatory subunit, delta isoform ([NAME], B subunit, B' delta isoform, [NAME], B subunit, B56 delta isoform, [NAME], B subunit, PR61 delta isoform, [NAME], B subunit, R5 delta isoform, [NAME], B subunit, B'-gamma) (Oryctolagus cuniculus); contains [NAME] domain, PF01603: Protein phosphatase 2A regulatory B subunit (B56 family) | 9 | 2peak
258394_at | [NAME] | long day | expressed protein | 9 | 2peak
258405_at | AT3G17590 | long day | BSH__transcription regulatory protein SNF5, putative (BSH), identical to SNF5 homolog BSH GI:1843628 from (Arabidopsis thaliana) | 10 | 2peak
258462_at | AT3G17350 | long day | expressed protein | 10 | 2peak
258505_at | AT3G06530 | long day | BAP28-related, similar to Protein BAP28 (Swiss-Prot:[NAME]) (Homo sapiens) | 10 | 2peak
258511_at | [NAME] | long day | expressed protein | 10 | 2peak
258621_at | AT3G02830 | long day | ZFN1__zinc finger (CCCH-type) family protein, contains [NAME] domain, PF00642: Zinc finger C-x8-C-x5-C-x3-H type (and similar) | 4 | 2peak
258679_at | AT3G08590 | long day | 2,3-biphosphoglycerate-independent phosphoglycerate mutase, putative / phosphoglyceromutase, putative, strong similarity to SP:Q42908 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC 5.4.2.1) ([NAME]) {Mesembryanthemum crystallinum}; contains [NAME] profile PF01676: Metalloenzyme superfamily | 4 | 2peak
258830_at | AT3G07090 | long day | expressed protein | 4 | 2peak
258908_at | AT3G06350 | long day | EMB3004__dehydroquinate dehydratase, putative / shikimate dehydrogenase, putative, similar to dehydroquinate dehydratase/shikimate dehydrogenase ([NAME] tabacum)(GI:535771), dehydroquinate dehydratase/shikimate:NADP oxidoreductase (Lycopersicon esculentum)(GI:3169883) | 4 | 2peak
259048_at | AT3G03380 | long day | DegP protease, putative, contains similarity to degP GI:2623992 from (Bradyrhizobium japonicum) | 10 | 2peak
259071_at | AT3G11650 | long day | NHL2__harpin-induced family protein / [NAME] family protein / harpin-responsive family protein / NDR1/HIN1-like protein 2, identical to NDR1/HIN1-Like protein 2 (GP:9502174) (Arabidopsis thaliana); similar to [NAME]:[NAME] (Nicotiana tabacum) | 10 | 2peak
259092_at | AT3G04870 | long day | ZDS_PDE181__zeta-carotene desaturase (ZDS1) / carotene 7,8-desaturase, identical to SP:Q38893 Zeta-carotene desaturase, chloroplast precursor (EC 1.14.99.30) ([NAME] 7,8-desaturase) {Arabidopsis thaliana} | 4 | 2peak
259227_at | AT3G07750 | long day | 3' exoribonuclease family domain 1-containing protein, similar to SP:Q15024 Exosome complex exonuclease RRP42 (EC 3.1.13.-) (Ribosomal RNA processing protein 42) {Homo sapiens}; contains [NAME] profile PF01138: 3' exoribonuclease family, domain 1 | 9 | 2peak
259228_at | AT3G07720 | long day | kelch repeat-containing protein, similar to epithiospecifier (GI:16118838) (Arabidopsis thaliana); contains [NAME] PF01344: Kelch motif (5 repeats) | 3 | 2peak
259264_at | AT3G01260 | long day | aldose 1-epimerase family protein, similar to non-cell-autonomous protein pathway2, plasmodesmal receptor (Nicotiana tabacum) GI:15824567; contains [NAME] profile PF01263: Aldose 1-epimerase | 9 | 2peak
259295_at | AT3G05340 | long day |  | 4 | 2peak
259308_at | AT3G05180 | long day | GDSL-motif lipase/hydrolase family protein, similar to early nodulin ENOD8 (Medicago sativa) GI:304037, elicitor-induced glycoprotein iEP4 ([NAME] carota) GI:1911765, lanatoside 15'-O-acetylesterase ([NAME] lanata) GI:3688284; contains InterPro Entry IPR001087 Lipolytic enzyme, G-D-S-L family | 4 | 2peak
259392_at | AT1G06380 | long day | ribosomal protein-related, similar to PBK1 protein (GI:3668141) {Homo sapiens}; weakly similar to 60S ribosomal protein L10a. (SP:Q963B6) (Fall armyworm) {Spodoptera frugiperda} | 10 | 2peak
259442_at | AT1G02310 | long day | glycosyl hydrolase family protein 5 / cellulase family protein / (1-4)-beta-mannan endohydrolase, putative, similar to (1-4)-beta-mannan endohydrolase precursor GI:9836826 from (Lycopersicon esculentum) | 4 | 2peak
259475_at | AT1G19140 | long day | expressed protein | 3 | 2peak
259560_at | AT1G21270 | long day | WAK2__wall-associated kinase 2 (WAK2), identical to wall-associated kinase 2 (Arabidopsis thaliana) GI:4826399; induced by salicylic acid or INA (PMID:10380805) | 9 | 2peak
259660_at | AT1G55260 | long day | protease inhibitor/seed storage/lipid transfer protein (LTP) family protein, contains [NAME] protease inhibitor/seed storage/LTP family domain PF00234 | 4 | 2peak
259737_at | AT1G64400 | long day | long-chain-fatty-acid--CoA ligase, putative / long-chain acyl-CoA synthetase, putative, similar to GI:1617270 (MF7P) from ([NAME] napus) | 4 | 2peak
259767_s_at | AT1G29350 | long day | expressed protein | 9 | 2peak
259767_s_at | AT1G29370 | long day | expressed protein | 9 | 2peak
259775_at | AT1G29530 | long day | expressed protein | 4 | 2peak
259865_at | AT1G72710 | long day | Encodes a member of the casein kinase 1 protein family that is localized to the cytoplasm and nucleus. | 9 | 2peak
260014_at | AT1G68010 | long day | HPR__glycerate dehydrogenase / NADH-dependent hydroxypyruvate reductase, identical to hydroxypyruvate reductase (HPR) GB:D85339 (Arabidopsis thaliana) (Plant Cell Physiol 1997 Apr;38(4):449-55) | 4 | 2peak
260072_at | [NAME] | long day | expressed protein | 4 | 2peak
260135_at | AT1G66400 | long day | calmodulin-related protein, putative, similar to calmodulin-related protein 2, touch-induced from SP:P25070 (Arabidopsis thaliana); contains [NAME] profile: PF00036 EF hand (4 copies) | 2 | 2peak
260141_at | AT1G66350 | long day | RGL1_RGL__gibberellin regulatory protein (RGL1), similar to GB:CAA75492 from (Arabidopsis thaliana); contains [NAME] profile PF03514: [NAME] family transcription factor; identical to cDNA RGL1 protein GI:15777856, RGL1 protein (Arabidopsis thaliana) GI:15777857 | 0 | 2peak
260143_at | AT1G71880 | long day | SUC1__sucrose transporter / sucrose-proton symporter (SUC1), identical to sucrose-proton symporter SUC1 (Arabidopsis thaliana) [NAME] | 9 | 2peak
260157_at | AT1G52930 | long day | brix domain-containing protein, contains [NAME] domain, PF04427: Brix domain | 9 | 2peak
260168_at | AT1G71980 | long day | protease-associated zinc finger (C3HC4-type RING finger) family protein, identical to ReMembR-H2 protein JR702 (Arabidopsis thaliana) gi:6942149:gb:AAF32326; contains [NAME] domain, PF02225: protease-associated (PA) domain and [NAME] domain, PF00097: Zinc finger, C3HC4 type (RING finger); identical to cDNA ReMembR-H2 protein JR702 mRNA, partial cds GI:6942148 | 9 | 2peak
260207_at | AT1G70730 | long day | phosphoglucomutase, cytoplasmic, putative / glucose phosphomutase, putative, strong similarity to SP:P93804 Phosphoglucomutase, cytoplasmic 1 (EC 5.4.2.2) ([NAME] phosphomutase 1) (PGM 1) {[NAME] mays}; contains InterPro accession IPR006352: Phosphoglucosamine mutase | 3 | 2peak
260248_at | AT1G74310 | long day | ATHSP101_HOT1_HSP101__heat shock protein 101 (HSP101), identical to heat shock protein 101 GI:6715468 [NAME]:AAF26423 from (Arabidopsis thaliana) | 4 | 2peak
260260_at | AT1G68540 | long day | oxidoreductase family protein, similar to cinnamoyl CoA reductase (Eucalyptus gunnii, gi:2058311), cinnamyl-alcohol dehydrogenase, E. gunnii (gi:1143445), CPRD14 protein, Vigna unguiculata (gi:1854445) | 4 | 2peak
260271_at | [NAME] | long day | protease-associated (PA) domain-containing protein, contains protease associated (PA) domain, [NAME]:PF02225 | 9 | 2peak
260327_at | AT1G63840 | long day | zinc finger (C3HC4-type RING finger) family protein, similar to RING-H2 finger protein RHA1a (GI:3790554) (Arabidopsis thaliana)' similar to BRH1 RING finger protein (Arabidopsis thaliana) GI:4689366; contains [NAME] profile PF00097: Zinc finger, C3HC4 type (RING finger) | 3 | 2peak
260429_at | AT1G72450 | long day | expressed protein | 8 | 2peak
260481_at | AT1G10960 | long day | ATFD1__ferredoxin, chloroplast, putative, strong similarity to FERREDOXIN PRECURSOR GB:P16972 (SP:P16972) from (Arabidopsis thaliana) | 4 | 2peak
260535_at | [NAME] | long day | expressed protein | 4 | 2peak
260601_at | AT1G55910 | long day | ZIP11__metal transporter, putative (ZIP11), similar to putative zinc transporter ZIP2 (Arabidopsis thaliana) gi:3252868:[NAME]:[NAME]; member of the Zinc (Zn2+)-Iron (Fe2+) permease (ZIP) family, PMID:11500563 | 4 | 2peak
260769_at | AT1G49010 | long day | [NAME] family transcription factor, contains [NAME] profile: PF00249 myb-like DNA-binding domain | 4 | 2peak
260821_at | AT1G06820 | long day | CRTISO_CCR2__carotenoid isomerase, putative, similar to carotenoid isomerase from Lycopersicon esculentum (gi:19550437); contains [NAME] profile: PF02032 [NAME] dehydrogenase related enzyme | 4 | 2peak
260969_at | AT1G12240 | long day | ATBETAFRUCT4_VAC-INV__beta-fructosidase (BFRUCT4) / beta-fructofuranosidase / invertase, vacuolar, identical to beta-fructosidase GI:1871503 from (Arabidopsis thaliana); contains [NAME] profile PF00251:Glycosyl hydrolases family 32; identical to cDNA beta-fructosidase (vacuolar form) GI:1321683; similar to SP:Q43857 | 3 | 2peak
261081_at | AT1G07350 | long day | transformer serine/arginine-rich ribonucleoprotein, putative, similar to GB:Y09506 from (Nicotiana tabacum) (Plant Mol. Biol. 35 (3), 261-269 (1997)) | 4 | 2peak
261130_at | AT1G04870 | long day | protein arginine N-methyltransferase family protein, similar to SP:Q96LA8 Protein arginine N-methyltransferase 6 (EC 2.1.1.-) {Homo sapiens} | 10 | 2peak
261230_at | AT1G20010 | long day | TUB5__tubulin beta-5 chain (TUB5), nearly identical to SP:P29513 Tubulin beta-5 chain {Arabidopsis thaliana} | 9 | 2peak
261301_at | AT1G48570 | long day | zinc finger (Ran-binding) family protein, contains [NAME] domain, PF00641: Zn-finger in Ran binding protein and others | 9 | 2peak
261309_at | AT1G48600 | long day | phosphoethanolamine N-methyltransferase 2, putative (NMT2), very similar to :PEM2_ARATH Putative phosphoethanolamine N-methyltransferase 2 (EC 2.1.1.103) (SP:Q944H0){Arabidopsis thaliana}; very similar to Halotolerance protein Hal3b (SP:P94063)(Arabidopsis [NAME]); to similar to GB:AAF61950 from ([NAME] oleracea) | 4 | 2peak
261319_at | AT1G53090 | long day | SPA4__WD-40 repeat family protein / phytochrome A-related, contains 7 WD-40 repeats (PF00400) (1 below cutoff); similar to phytochrome A supressor [NAME] (GI:4809171) (Arabidopsis thaliana) | 3 | 2peak
261374_at | AT1G52990 | long day | [NAME] family protein, similar to SP:P48384 [NAME], chloroplast precursor (TRX-M) {Pisum sativum}; contains [NAME] profile PF00085: Thioredoxin | 4 | 2peak
261458_at | AT1G21080 | long day | DNAJ heat shock N-terminal domain-containing protein, similar to SP:P39101 CAJ1 protein (Saccharomyces cerevisiae); contains [NAME] profile PF00226 DnaJ domain; | 4 | 2peak
261488_at | AT1G14345 | long day | expressed protein, contains one transmembrane domain | 3 | 2peak
261614_at | AT1G49760 | long day | PAB8__polyadenylate-binding protein, putative / PABP, putative, similar to poly(A)-binding protein GB:AAF66825 GI:7673359 from (Nicotiana tabacum). Highly and ubiquitously expressed. Member of the class II PABP family. | 10 | 2peak
261672_at | AT1G18450 | long day | ATARP4_ARP4__actin-related protein 4 (ARP4), neary identical to actin-related protein 4 (ARP4) (Arabidopsis thaliana) GI:21427463; contains [NAME] profile PF00022: [NAME]; supporting cDNA gi:21427462:gb:AF507912.1: | 9 | 2peak
261758_at | AT1G08250 | long day | prephenate dehydratase family protein, contains similarity to prephenate dehydratase GI:1008717 from (Amycolatopsis methanolica) | 3 | 2peak
261793_at | AT1G16080 | long day | expressed protein | 4 | 2peak
261813_at | AT1G08280 | long day | glycosyl transferase family 29 protein / sialyltransferase family protein, contains [NAME] profile: PF00777 sialyltransferase (Glycosyltransferase family 29) | 11 | 2peak
261832_at | [NAME] | long day | expressed protein | 3 | 2peak
261927_at | AT1G22500 | long day | zinc finger (C3HC4-type RING finger) family protein, contains [NAME] profile: PF00097: Zinc finger, C3HC4 type (RING finger) | 9 | 2peak
261956_at | AT1G64590 | long day | short-chain dehydrogenase/reductase (SDR) family protein, contains INTERPRO family IPR002198 short-chain dehydrogenase/reductase (SDR) superfamily | 4 | 2peak
262024_at | AT1G35620 | long day | ATPDIL5-2__Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. | 10 | 2peak
262098_at | [NAME] | long day | HAP5B__transcription factor, putative, similar to Transcription factor [NAME]:CAA74053 GI:2398533 from (Arabidopsis thaliana) similarity to transcription factor Hap5a similar to transcription factor Hap5a (Arabidopsis thaliana)(GI:6523090) | 3 | 2peak
262119_s_at | AT1G02920 | long day | [NAME], putative, similar to glutathione S-transferase GI:860955 from (Hyoscyamus muticus); supported by cDNA GI:443697. | 4 | 2peak
262119_s_at | AT1G02930 | long day | [NAME], putative, similar to glutathione S-transferase GI:860955 from (Hyoscyamus muticus); supported by cDNA GI:443697. | 4 | 2peak
262281_at | AT1G68570 | long day | proton-dependent oligopeptide transport (POT) family protein, contains [NAME] profile: PF00854 POT family | 4 | 2peak
262287_at | AT1G68660 | long day | expressed protein | 4 | 2peak
262306_s_at | AT1G70980 | long day | SYNC1__asparaginyl-tRNA synthetase, cytoplasmic, putative / asparagine-tRNA ligase, putative, similar to SYNC1 protein GI:5670315 (SP:Q9SW96) from (Arabidopsis thaliana) | 10 | 2peak
262326_at | AT1G64140 | long day | expressed protein, similar to putative disease resistance protein GB:CAB40943 GI:4586107 from (Arabidopsis thaliana); weak similarity to [NAME] (Swiss-Prot:P23490) (Homo sapiens) | 3 | 2peak
262354_at | AT1G64200 | long day | VHA-E3__vacuolar ATP synthase subunit E, putative / V-ATPase E subunit, putative / vacuolar proton pump E subunit, putative, similar to SP:Q39258 Vacuolar ATP synthase subunit E (EC 3.6.3.14) (V-ATPase E subunit) (Vacuolar proton pump E subunit) {Arabidopsis thaliana}; contains [NAME] profile PF01991: ATP synthase ([NAME]) subunit | 4 | 2peak
262453_at | [NAME] | long day | expressed protein | 10 | 2peak
262539_at | AT1G17200 | long day | integral membrane family protein, Location of est 136A23T7 (gb:T45563); contains TIGRFAM TIGR01569 : plant integral membrane protein TIGR01569; contains [NAME] PF04535 : Domain of unknown function (DUF588) | 5 | 2peak
262608_at | AT1G14120 | long day | 2-oxoglutarate-dependent dioxygenase, putative, similar to adventitious rooting related oxygenase ARRO-1 from Malus x domestica, gi:3492806; contains [NAME] domain PF03171, 2OG-Fe(II) oxygenase superfamily | 4 | 2peak
262678_at | AT1G75810 | long day | expressed protein | 4 | 2peak
262744_at | AT1G28680 | long day | transferase family protein, similar to elicitor inducible gene product EIG-I24 (Nicotiana tabacum) (gi:10798748); contains [NAME] transferase family domain PF00248 | 4 | 2peak
262793_at | AT1G13110 | long day | CYP71B7__cytochrome P450 71B7 (CYP71B7), identical to (SP:Q96514) cytochrome P450 71B7 (Arabidopsis thaliana); PF:00067 Cytochrome P450 family. [NAME]:[NAME], gb:T04814, gb:R65111, gb:T44310 and gb:T04541 come from this gene; identical to cDNA cytochrome P450 GI:1523795, ATCYP71B7 | 9 | 2peak
262848_at | AT1G14685 | long day | BPC2__expressed protein | 9 | 2peak
262878_at | AT1G64770 | long day | similar to expressed protein [Arabidopsis thaliana] (TAIR:At1g55370.1); similar to expressed protein [Arabidopsis thaliana] (TAIR:At1g55370.2); similar to putative antifreeze glycoprotein precursor [Oryza sativa] (GB:XP_469743.1) | 4 | 2peak
262883_at | AT1G64780 | long day | ATAMT1;2__ammonium transporter 1, member 2 (AMT1.2), nearly identical to SP:Q9ZPJ8 Ammonium transporter 1, member 2 (AtAMT1;2) {Arabidopsis thaliana} | 4 | 2peak
263048_s_at | AT2G05310 | long day | expressed protein | 4 | 2peak
263192_at | AT1G36160 | long day | ACC1_EMB22_GK_PAS3__similar to acetyl-CoA carboxylase 2 ([NAME]) [Arabidopsis thaliana] (TAIR:At1g36180.1); similar to putative acetyl-CoA carboxylase [Oryza sativa (japonica cultivar-group)] (GB:AAP53321.1); similar to acetyl-CoA carboxylase [Medicago sativa] (GB:AAB42144.1); similar to acetyl-CoA carboxylase [[NAME] napus] (GB:CAC19875.1); similar to acetyl-CoA carboxylase [[NAME] napus] (GB:CAC19876.1); similar to acetyl CoA carboxylase (GB:AAA75528.1); contains InterPro domain Carboxyl transferase (InterPro:IPR000022); contains InterPro domain Carbamoyl-phosphate synthetase large chain, N-terminal (InterPro:IPR005481); contains InterPro domain [NAME] carboxylase, C-terminal (InterPro:IPR005482); contains InterPro domain Biotin/lipoyl attachment (InterPro:[NAME]); contains InterPro domain Carbamoyl-phosphate synthase L chain, ATP-binding (InterPro:IPR005479) | 4 | 2peak
263334_at | AT2G03820 | long day | nonsense-mediated mRNA decay NMD3 family protein, contains [NAME] profile: PF04981 NMD3 family | 10 | 2peak
263374_at | AT2G20560 | long day | DNAJ heat shock family protein, SP:Q9UDY4 [NAME] homolog subfamily B member 4 (Heat shock 40 kDa protein 1 homolog) {Homo sapiens}; contains [NAME] profile PF00226: DnaJ domain | 4 | 2peak
263406_at | AT2G04160 | long day | AIR3__subtilisin-like protease ([NAME]), almost identical to subtilisin-like protease AIR3 GI:4218991 from (Arabidopsis thaliana), missing 200 aa at N-terminus | 4 | 2peak
263483_at | AT2G04030 | long day | EMB1956_CR88__heat shock protein, putative, strong similarity to heat shock protein (Arabidopsis thaliana) GI:1906830; contains [NAME] profiles PF02518: ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein, PF00183: Hsp90 protein | 4 | 2peak
263668_at | AT1G04350 | long day | 2-oxoglutarate-dependent dioxygenase, putative, Similar to Arabidopsis 2A6 (gb:[NAME]) and to tomato ethylene synthesis regulatory protein E8 (SP:P10967); EST [NAME]:T76913 comes from this gene | 4 | 2peak
263669_at | AT1G04400 | long day | CRY2_AT-PHH1_FHA_PHH1__cryptochrome 2 apoprotein (CRY2) / blue light photoreceptor (PHH1), 97% identical to photolysase (PHH1) (SP:[NAME]) and cryptochrome 2 apoprotein (CRY2) (SP:U43397). [NAME]:W43661 and gb:[NAME] come from this gene; contains [NAME] profiles PF03441: FAD binding domain of DNA photolyase and PF00875: deoxyribodipyrimidine photolyase; identical to cDNA Cvi cryptochrome 2 (CRY2) GI:18026275 | 9 | 2peak
263787_at | AT2G46420 | long day | expressed protein | 3 | 2peak
263845_at | AT2G37040 | long day | PAL1__phenylalanine ammonia-lyase 1 (PAL1), nearly identical to SP:P35510 | 3 | 2peak
263875_at | AT2G21970 | long day | SEP2__stress enhanced protein 2 (SEP2), nearly identical to stress enhanced protein 2; SEP2 (GI:7384980) (Arabidopsis thaliana) | 3 | 2peak
263897_at | AT2G21940 | long day | shikimate kinase, putative, similar to shikimate kinase precursor from Lycopersicon esculentum (SP:Q00497); contains [NAME] shikimate kinase domain PF01202 | 4 | 2peak
263901_at | AT2G36320 | long day | zinc finger (AN1-like) family protein, contains [NAME] domain, PF01428: AN1-like Zinc finger | 9 | 2peak
263951_at | AT2G35960 | long day | NHL12__harpin-induced family protein / [NAME] family protein / harpin-responsive family protein, similar to harpin-induced protein [NAME] ( GI:1619321) (Nicotiana tabacum) | 3 | 2peak
263952_s_at | AT2G35810 | long day | expressed protein | 4 | 2peak
263953_at | AT2G36050 | long day | ATOFP15_OFP15__ovate protein-related, contains TIGRFAM TIGR01568 : uncharacterized plant-specific domain TIGR01568 | 9 | 2peak
263956_at | AT2G35940 | long day | BLH1__similar to BEL1-like homeobox 4 protein (BLH4) [Arabidopsis thaliana] (TAIR:At2g23760.1); similar to BEL1-like homeobox 4 protein (BLH4) [Arabidopsis thaliana] (TAIR:At2g23760.2); similar to bell-like homeodomain protein 2 [Lycopersicon esculentum] (GB:AAP47025.1); contains InterPro domain POX (InterPro:IPR006563); contains InterPro domain [NAME] (InterPro:IPR001356) | 3 | 2peak
263958_at | AT2G36240 | long day | similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:At1g09900.1); similar to putative pentatricopeptide repeat protein [Oryza sativa (japonica cultivar-group)] (GB:NP_909693.1); contains InterPro domain PPR repeat (InterPro:IPR002885); contains InterPro domain Proline-rich region (InterPro:IPR000694) | 11 | 2peak
263987_at | [NAME] | long day | lipase, putative, similar to lipase ([NAME] caryophyllus) GI:4103627; contains [NAME] profile PF01764: Lipase | 4 | 2peak
264002_at | AT2G22360 | long day | DNAJ heat shock family protein, similar to SP:Q9S5A3 Chaperone protein dnaJ {[NAME] monocytogenes}; contains [NAME] profiles PF00226 DnaJ domain, PF01556 DnaJ C terminal region, PF00684 DnaJ central domain (4 repeats) | 4 | 2peak
264018_at | AT2G21170 | long day | TIM__triosephosphate isomerase, chloroplast, putative, similar to Triosephosphate isomerase, chloroplast precursor: SP:P48496 from Spinacia oleracea, SP:P46225 from Secale cereale | 4 | 2peak
264271_at | AT4G22100 | long day |  | 4 | 2peak
264482_at | AT1G77210 | long day | sugar transporter, putative, similar to monosaccharide transporter PaMst-1 (Picea abies) GI:2258137, sugar carrier protein GI:169735 from ([NAME] communis), glucose transporter (Saccharum hybrid cultivar H65-7052) GI:347855; contains [NAME] profile PF00083: major facilitator superfamily protein | 8 | 2peak
264672_at | [NAME] | long day | chloroplast nucleoid DNA-binding protein-related, contains [NAME] profile PF00026: Eukaryotic aspartyl protease;b similar to CND41, chloroplast nucleoid DNA binding protein (GI:2541876) (Nicotiana tabacum) | 9 | 2peak
264692_at | AT1G70000 | long day | DNA-binding family protein, contains [NAME] domains, PF00249: Myb-like DNA-binding domain and PF00098: Zinc knuckle | 4 | 2peak
264724_at | AT1G22920 | long day | AJH1_CSN5A_JAB1__COP9 signalosome subunit 5B / CSN subunit 5B (CSN5B) / c-JUN coactivator protein AJH1, putative (AJH1), COP9 complex subunit CSN5-1; identical to Arabidopsis homologs of a c-Jun coactivator [NAME] GI:3641314 from (Arabidopsis thaliana); identical to cDNA CSN complex subunit 5B (CSN5B) GI:18056662; contains [NAME] profile PF01398: Mov34/MPN/PAD-1 family | 9 | 2peak
264738_at | AT1G62250 | long day | expressed protein | 4 | 2peak
264779_at | AT1G08570 | long day | [NAME] family protein, contains [NAME] profile: PF00085 [NAME]; similar to ESTs gb:T46281, [NAME]:R83933, gb:N65879, emb:F14466, [NAME]:N96726, gb:AA042340, and emb:Z18150 | 4 | 2peak
264854_at | AT2G17450 | long day | RHA3A__zinc finger (C3HC4-type RING finger) family protein, contains [NAME] domain, PF00097: Zinc finger, C3HC4 type (RING finger) | 9 | 2peak
264898_at | AT1G23205 | long day | invertase/pectin methylesterase inhibitor family protein, low similarity to pectinesterase from Phaseolus vulgaris SP:Q43111, Lycopersicon esculentum SP:Q43143; contains [NAME] profile PF04043: Plant invertase/pectin methylesterase inhibitor | 3 | 2peak
264931_at | AT1G60590 | long day | polygalacturonase, putative / pectinase, putative, similar to polygalacturonase PG1 (GI:5669846), PG2 (GI:5669848) from (Glycine max); contains PF00295: Glycosyl hydrolases family 28 (polygalacturonases) | 4 | 2peak
264980_at | AT1G27190 | long day | leucine-rich repeat transmembrane protein kinase, putative, similar to CLV1 receptor [NAME]:AAB58929 GI:2160756 from (Arabidopsis thaliana) | 10 | 2peak
265073_at | [NAME] | long day | expressed protein | 4 | 2peak
265091_s_at | AT1G03940 | long day |  | 4 | 2peak
265122_at | AT1G62540 | long day | flavin-containing monooxygenase family protein / FMO family protein, similar to flavin-containing monooxygenase [NAME]:AAA21178 GI:349534 from Oryctolagus cuniculus (SP:P32417), SP:P97501 from Mus musculus; contains [NAME] profile PF00743 Flavin-binding monooxygenase-like | 4 | 2peak
265269_at | [NAME] | long day | expressed protein | 4 | 2peak
265305_at | AT2G20340 | long day | tyrosine decarboxylase, putative, similar to tyrosine/dopa decarboxylase (Papaver somniferum) GI:3282527, SP:Q06087 [NAME] decarboxylase 3 (EC 4.1.1.25) {[NAME] crispum}; contains [NAME] profile PF00282: Pyridoxal-dependent decarboxylase conserved domain | 4 | 2peak
265336_at | AT2G18290 | long day | anaphase-promoting complex, subunit 10 family / APC10 family, contains [NAME]: Anaphase-promoting complex, subunit 10 (APC10) domain; similar to anaphase promoting complex subunit APC10 (GI:6463666) (Homo sapiens) | 8 | 2peak
265393_at | [NAME] | long day | expressed protein, weak similarity to formiminotransferase cyclodeaminase (GI:3980064) (Gallus gallus) | 3 | 2peak
265451_at | AT2G46490 | long day | expressed protein (APS2), identical to cDNA Aps2, partial cds GI:4519894 | 9 | 2peak
265481_at | AT2G15960 | long day | expressed protein | 9 | 2peak
265662_at | AT2G24500 | long day | FZF__zinc finger (C2H2 type) family protein, contains [NAME] profile: PF00096 zinc finger, C2H2 type | 10 | 2peak
265665_at | AT2G27420 | long day | cysteine proteinase, putative, contains similarity to cysteine protease SPCP1 GI:13491750 from (Ipomoea batatas) | 4 | 2peak
265730_at | AT2G32220 | long day | 60S ribosomal protein L27 (RPL27A) | 11 | 2peak
265823_at | AT2G35760 | long day | integral membrane family protein, contains TIGRFAM TIGR01569 : plant integral membrane protein TIGR01569; contains [NAME] PF04535 : Domain of unknown function (DUF588) | 4 | 2peak
266264_at | AT2G27775 | long day | expressed protein | 10 | 2peak
266291_at | AT2G29300 | long day | tropinone reductase, putative / tropine dehydrogenase, putative, similar to tropinone reductase SP:P50165 from ([NAME] stramonium) | 7 | 2peak
266291_at | AT2G29320 | long day | tropinone reductase, putative / tropine dehydrogenase, putative, similar to tropinone reductase SP:P50165 from ([NAME] stramonium) | 7 | 2peak
266295_at | AT2G29550 | long day | TUB7__tubulin beta-7 chain (TUB7), identical to GB:M84704 SP:P29515 Tubulin beta-7 chain {Arabidopsis thaliana} | 10 | 2peak
266532_at | AT2G16890 | long day | UDP-glucoronosyl/UDP-glucosyl transferase family protein, contains [NAME] profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase | 3 | 2peak
266557_at | [NAME] | long day | expressed protein | 4 | 2peak
266702_at | AT2G19860 | long day | ATHXK2__hexokinase 2 (HXK2), identical to hexokinase 2 (Arabidopsis thaliana) Swiss-Prot:[NAME] | 4 | 2peak
266718_at | [NAME] | long day | ZAT_ATMTP1_MTP1_ZAT1__zinc transporter (ZAT), identical to zinc transporter ZAT (Arabidopsis thaliana) gi:4206640:gb:AAD11757; member of the cation diffusion facilitator (CDF) family, or cation efflux (CE) family, PMID:11500563 | 4 | 2peak
266873_at | AT2G44740 | long day | [NAME] family protein, similar to cyclin 2 (Trypanosoma brucei) GI:7339572, cyclin 6 (Trypanosoma cruzi) GI:12005317; contains [NAME] profile PF00134: Cyclin, N-terminal domain | 9 | 2peak
266892_at | [NAME] | long day | glycine dehydrogenase (decarboxylating), putative / glycine decarboxylase, putative / glycine cleavage system P-protein, putative, strong similarity to SP:P26969 Glycine dehydrogenase (decarboxylating), mitochondrial precursor (EC 1.4.4.2) {Pisum sativum}; contains [NAME] profile PF02347: Glycine cleavage system P-protein | 4 | 2peak
266903_at | AT2G34570 | long day | expressed protein, contains [NAME] profile: PF04900 protein of unknown function, DUF652 | 9 | 2peak
267017_at | AT2G39140 | long day | pseudouridine synthase family protein | 10 | 2peak
267132_at | AT2G23420 | long day | nicotinate phosphoribosyltransferase family protein / NAPRTase family protein, contains [NAME] domain PF04095: Nicotinate phosphoribosyltransferase (NAPRTase) | 4 | 2peak
267138_s_at | AT2G38210 | long day | ethylene-responsive protein, putative, very strong similarity to ethylene-inducible protein HEVER SP:Q39963 from (Hevea brasiliensis) | 3 | 2peak
267138_s_at | AT2G38230 | long day | ethylene-responsive protein, putative, very strong similarity to ethylene-inducible protein HEVER SP:Q39963 from (Hevea brasiliensis) | 3 | 2peak
267138_s_at | AT2G38240 | long day | ethylene-responsive protein, putative, very strong similarity to ethylene-inducible protein HEVER SP:Q39963 from (Hevea brasiliensis) | 3 | 2peak
267181_at | AT2G37760 | long day | aldo/keto reductase family protein, similar to chalcone reductase (Sesbania rostrata)(GI:2792155), and aldose reductase [NAME] ([NAME] viscosa)(GI:4539944), (Hordeum vulgare)(GI:728592) | 4 | 2peak
267187_s_at | AT2G44160 | long day | MTHFR2__methylenetetrahydrofolate reductase 2 (MTHFR2), identical to SP:O80585 Methylenetetrahydrofolate reductase (EC 1.5.1.20) {Arabidopsis thaliana} | 4 | 2peak
267256_s_at | AT2G23000 | long day | SCPL10__serine carboxypeptidase S10 family protein, similar to serine carboxypeptidase I precursor (SP:P37890) (Oryza sativa) | 4 | 2peak
267299_at | AT2G30150 | long day | UDP-glucoronosyl/UDP-glucosyl transferase family protein, contains [NAME] profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase | 3 | 2peak
267456_at | AT2G33770 | long day |  | 4 | 2peak
267470_at | AT2G30490 | long day | ATC4H_C4H_CYP73A5__trans-cinnamate 4-monooxygenase / cinnamic acid 4-hydroxylase (C4H) (CA4H) / cytochrome P450 73 (CYP73) (CYP73A5), identical to SP:P92994: Trans-cinnamate 4-monooxygenase (EC 1.14.13.11) (Cinnamic acid 4-hydroxylase) (CA4H) (C4H) (P450C4H) (Cytochrome P450 73). {Arabidopsis thaliana}; molecular marker C4H (GB:U71080) | 3 | 2peak
267477_at | AT2G02710 | long day | PAC motif-containing protein, similar to nonphototropic hypocotyl 1 ([NAME] mays) GI:2687358; contains [NAME] profile PF00785: PAC motif | 8 | 2peak
267523_at | AT2G30600 | long day | similar to BTB/POZ domain-containing protein [Arabidopsis thaliana] (TAIR:At2g46260.1); similar to similar to Dictyostelium discoideum (Slime mold). MigA (GB:AAS45368.1); contains InterPro domain BTB/POZ domain (InterPro:IPR000210) | 8 | 2peak
267524_at | AT2G30600 | long day | similar to BTB/POZ domain-containing protein [Arabidopsis thaliana] (TAIR:At2g46260.1); similar to similar to Dictyostelium discoideum (Slime mold). MigA (GB:AAS45368.1); contains InterPro domain BTB/POZ domain (InterPro:IPR000210) | 8 | 2peak
267595_at | AT2G32990 | long day | glycosyl hydrolase family 9 protein, similar to endo-beta-1,4-glucanase GI:4972236 from (Fragaria x ananassa) | 3 | 2peak
246202_at | AT4G37040 | [NAME] | MAP1D__metallopeptidase M24 family protein, similar to SP:O33343 [NAME] aminopeptidase (EC 3.4.11.18) (Peptidase M) {Mycobacterium tuberculosis}; contains [NAME] profile PF00557: metallopeptidase family M24 | 2 | 2peak
246738_at | AT5G27740 | [NAME] | expressed protein | 2 | 2peak
247029_at | AT5G67190 | [NAME] | encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 16 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10. | 8 | 2peak
248283_at | AT5G52920 | [NAME] | pyruvate kinase, putative, similar to pyruvate kinase isozyme G, chloroplast precursor (Nicotiana tabacum) SWISS-PROT:Q40546 | 0 | 2peak
248422_at | AT5G51640 | [NAME] | YLS7__leaf senescence protein-related (YLS7 ), annotation temporarily based on supporting cDNA gi:13122291:dbj:AB047810.1:; identical to cDNA YLS7 leaf-senescence-related protein GI:13122291 | 4 | 2peak
252647_at | AT3G44620 | [NAME] | similar to protein tyrosine phosphatase-like protein [Oryza sativa (japonica cultivar-group)] (GB:AAO72543.1); contains InterPro domain Low molecular weight phosphotyrosine protein phosphatase (InterPro:IPR000106) | 2 | 2peak
245253_at | AT4G15440 | LDHC | HPL1_CYP74B2__hydroperoxide lyase (HPL1), identical to hydroperoxide lyase GI:3822403 from (Arabidopsis thaliana) | 6 | 2peak
245810_at | [NAME] | LDHC | expressed protein, contains [NAME] PF03138: Plant protein family. The function of this family of plant proteins is unknown; previously annotated as 'growth regulator-related protein' based on similarity to axi 1 protein (GB:X80301) (GI:559920) from (Nicotiana tabacum), which, due to scienitific fraud was retracted. Retraction in: [NAME] J 1999 May 17;18(10):2908. PMID:10400497. | 0 | 2peak
245810_at | [NAME] | LDHC | expressed protein, contains [NAME] PF03138: Plant protein family. The function of this family of plant proteins is unknown; previously annotated as 'growth regulator-related protein' based on similarity to axi 1 protein (GB:X80301) (GI:559920) from (Nicotiana tabacum), which, due to scienitific fraud was retracted. Retraction in: [NAME] J 1999 May 17;18(10):2908. PMID:10400497. | 0 | 2peak
246481_s_at | AT5G15960 | LDHC | KIN1__stress-responsive protein (KIN1) / stress-induced protein (KIN1), identical to SP:P18612 Stress-induced KIN1 protein {Arabidopsis thaliana} | 5 | 2peak
246856_at | AT5G26210 | LDHC | PHD finger family protein, contains [NAME] domain, PF00628: PHD-finger | 3 | 2peak
247677_at | AT5G59420 | LDHC | oxysterol-binding family protein, similar to SP:P16258 Oxysterol-binding protein 1 {Oryctolagus cuniculus}; contains [NAME] profile PF01237: Oxysterol-binding protein | 11 | 2peak
248426_at | AT5G51740 | LDHC | peptidase M48 family protein, contains [NAME] domain, PF01435: Peptidase family M48 | 10 | 2peak
248764_at | AT5G47640 | LDHC | CCAAT-box binding transcription factor subunit B (NF-YB) ([NAME] ) (AHAP3) family (Hap3b), similar to CAAT-box DNA binding protein subunit B (NF-YB) (SP:P25209) (GI:22380) ([NAME] mays); contains [NAME] PF00808 : Histone-like transcription factor (CBF/NF-Y) and archaeal histone; identical to cDNA transcription factor Hap3b (Hap3b) mRNA, partial cds GI:9965734 | 0 | 2peak
248764_at | AT5G47650 | LDHC | CCAAT-box binding transcription factor subunit B (NF-YB) ([NAME] ) (AHAP3) family (Hap3b), similar to CAAT-box DNA binding protein subunit B (NF-YB) (SP:P25209) (GI:22380) ([NAME] mays); contains [NAME] PF00808 : Histone-like transcription factor (CBF/NF-Y) and archaeal histone; identical to cDNA transcription factor Hap3b (Hap3b) mRNA, partial cds GI:9965734 | 0 | 2peak
250396_at | [NAME] | LDHC | zinc finger (C2H2 type) family protein, contains zinc finger, C2H2 type domain, Prosite:PS00028 | 0 | 2peak
250502_at | AT5G09590 | LDHC | mtHSC70-2_HSC70-5__heat shock protein 70 / HSP70 (HSC70-5), identical to heat shock protein 70 (Arabidopsis thaliana) GI:6746590 | 5 | 2peak
250994_at | AT5G02490 | LDHC | heat shock cognate 70 kDa protein 2 (HSC70-2) (HSP70-2), identical to SP:P22954 [NAME] shock cognate 70 kDa protein 2 (Hsc70.2) {Arabidopsis thaliana} | 0 | 2peak
253949_at | AT4G26780 | LDHC | AR192__co-chaperone grpE family protein, similar to chaperone GrpE type 2 (Nicotiana tabacum) GI:3851640; contains [NAME] profile PF01025: co-chaperone GrpE | 5 | 2peak
256093_at | AT1G20823 | LDHC | zinc finger (C3HC4-type RING finger) family protein, contains [NAME] domain, PF00097: Zinc finger, C3HC4 type (RING finger) | 0 | 2peak
257880_at | AT3G16910 | LDHC | AAE7_ACN1__Encodes a peroxisomal protein with acetyl-CoA synthetase activity that is responsible for the activation of acetate for entry into the glyoxylate cycle. | 7 | 2peak
258728_at | AT3G11800 | LDHC | expressed protein | 3 | 2peak
258847_at | AT3G03100 | LDHC | similar to NADH:ubiquinone oxidoreductase B17.2-like subunit [[NAME] reinhardtii] (GB:AAQ64638.1); contains InterPro domain NADH:ubiquinone oxidoreductase 17.2 kD subunit (InterPro:IPR007763) | 1 | 2peak
258869_at | AT3G03090 | LDHC | sugar transporter family protein, similar to xylose permease (Bacillus megaterium) GI:1924928; contains [NAME] profile PF00083: major facilitator superfamily protein | 5 | 2peak
261303_at | AT1G48620 | LDHC | histone H1/H5 family protein, weak similarity to HMG I/Y like protein (Glycine max) GI:15706274, HMG-I/Y protein HMGa (Triticum aestivum) GI:20502966; contains [NAME] profiles PF00538: linker histone H1 and H5 family, PF02178: AT hook motif | 11 | 2peak
263497_at | AT2G42540 | LDHC | COR15A_COR15__cold-responsive protein / cold-regulated protein (cor15a), identical to cold-regulated protein cor15a (Arabidopsis thaliana) GI:507149; contains [NAME] profile PF02987: Late embryogenesis abundant protein | 0 | 2peak
263692_at | AT1G26850 | LDHC | dehydration-responsive family protein, similar to early-responsive to dehydration stress ERD3 protein (Arabidopsis thaliana) GI:15320410; contains [NAME] profile PF03141: Putative methyltransferase | 4 | 2peak
264909_at | AT2G17300 | LDHC | expressed protein | 0 | 2peak
265077_at | AT1G55530 | LDHC | zinc finger (C3HC4-type RING finger) family protein, contains [NAME] domain, PF00097: Zinc finger, C3HC4 type (RING finger) | 1 | 2peak
245172_at | AT2G47540 | LL_LDHC | pollen Ole e 1 allergen and extensin family protein, contains [NAME] domain, PF01190: Pollen proteins Ole e I family | 4 | 2peak
245795_at | AT1G32160 | LL_LDHC | expressed protein | 0 | 2peak
245950_at | AT5G19570 | LL_LDHC | expressed protein | 5 | 2peak
246621_at | [NAME] | LL_LDHC | eIF4-gamma/eIF5/eIF2-epsilon domain-containing protein, low similarity to SP:Q13144 Translation initiation factor [NAME] epsilon subunit (eIF-2B GDP-GTP exchange factor) {Homo sapiens}; contains [NAME] profile PF02020: eIF4-gamma/eIF5/eIF2-epsilon | 0 | 2peak
246652_at | AT5G35190 | LL_LDHC | proline-rich extensin-like family protein, contains proline-rich extensin domains, INTERPRO:IPR002965 | 4 | 2peak
246991_at | AT5G67400 | LL_LDHC | peroxidase 73 (PER73) (P73) (PRXR11), identical to SP:Q43873 Peroxidase 73 precursor (EC 1.11.1.7) (Atperox P73) (PRXR11) ([NAME]) {Arabidopsis thaliana} | 4 | 2peak
247174_at | AT5G65250 | LL_LDHC | expressed protein | 5 | 2peak
247755_at | AT5G59090 | LL_LDHC | similar to subtilase family protein [Arabidopsis thaliana] (TAIR:At5g58820.1); similar to subtilase family protein [Arabidopsis thaliana] (TAIR:At5g59100.1); similar to subtilase family protein [Arabidopsis thaliana] (TAIR:At5g59130.1); similar to subtilase family protein [Arabidopsis thaliana] (TAIR:At5g58840.1); similar to subtilase family protein [Arabidopsis thaliana] (TAIR:At5g59120.1); similar to pre-pro-cucumisin [Cucumis melo] (GB:BAA06905.1); contains InterPro domain Protease-associated PA (InterPro:IPR003137); contains InterPro domain Subtilase serine protease (InterPro:IPR000209) | 4 | 2peak
248636_at | AT5G49080 | LL_LDHC |  | 4 | 2peak
248979_at | AT5G45080 | LL_LDHC | ATPP2-A6__disease resistance protein-related, weak similarity to disease resistance protein rps4-RLD (Arabidopsis thaliana) GI:5823585; contains [NAME] profile PF01582: TIR domain | 4 | 2peak
249289_at | AT5G41040 | LL_LDHC | transferase family protein, similar to hypersensitivity-related gene product HSR201 - Nicotiana tabacum, EMBL:[NAME]; contains [NAME] transferase family domain PF00248 | 10 | 2peak
250059_at | AT5G17820 | LL_LDHC | peroxidase 57 (PER57) (P57) (PRXR10), identical to SP:Q43729 Peroxidase 57 precursor (EC 1.11.1.7) (Atperox P57) (PRXR10) (ATP13a) {Arabidopsis thaliana} | 4 | 2peak
250474_at | AT5G10230 | LL_LDHC | ANN7__annexin 7 ([NAME]), nearly identical to calcium-binding protein annexin 7 (Arabidopsis thaliana) GI:12667522 | 4 | 2peak
250682_x_at | AT2G24980 | LL_LDHC | proline-rich extensin-like family protein, contains proline-rich extensin domains, INTERPRO:IPR002965 | 4 | 2peak
250682_x_at | AT5G06630 | LL_LDHC | proline-rich extensin-like family protein, contains proline-rich extensin domains, INTERPRO:IPR002965 | 4 | 2peak
250682_x_at | AT5G49080 | LL_LDHC | proline-rich extensin-like family protein, contains proline-rich extensin domains, INTERPRO:IPR002965 | 4 | 2peak
251226_at | AT3G62680 | LL_LDHC | PRP3__proline-rich family protein, contains proline-rich region, INTERPRO:IPR000694 | 4 | 2peak
251812_at | AT3G54970 | LL_LDHC | expressed protein | 3 | 2peak
251843_x_at | AT3G54590 | LL_LDHC | ATHRGP1__proline-rich extensin-like family protein, contains proline-rich extensin domains, INTERPRO:IPR002965 | 4 | 2peak
251918_at | AT3G54040 | LL_LDHC | photoassimilate-responsive protein-related, contains weak similarity to mRNA inducible by sucrose and salicylic acid expressed in sugar-accumulating tobacco plants (GI:871487) (Nicotiana tabacum) | 4 | 2peak
252278_at | AT3G49530 | LL_LDHC | ANAC062__no apical meristem (NAM) family protein, contains [NAME] PF02365: No apical meristem (NAM) domain; similar to NAC2 - Arabidopsis thaliana, EMBL:AF201456 | 3 | 2peak
253998_at | AT4G26010 | LL_LDHC | peroxidase, putative, peroxidase ATP13a - Arabidopsis thaliana, PID:e264765; identical to cDNA class III peroxidase ATP35, GI:17530565 | 10 | 2peak
254044_at | AT4G25820 | LL_LDHC | XTR9__xyloglucan:xyloglucosyl transferase / xyloglucan endotransglycosylase / endo-xyloglucan transferase (XTR9), identical to xyloglucan endotransglycosylase GI:4218963 from (Arabidopsis thaliana) | 4 | 2peak
254772_at | AT4G13390 | LL_LDHC | proline-rich extensin-like family protein, contains proline-rich extensin domains, INTERPRO:IPR002965 | 4 | 2peak
255140_x_at | AT4G08400 | LL_LDHC | proline-rich extensin-like family protein, contains proline-rich extensin domains, INTERPRO:IPR002965; | 4 | 2peak
255140_x_at | AT4G08410 | LL_LDHC | proline-rich extensin-like family protein, contains proline-rich extensin domains, INTERPRO:IPR002965; | 4 | 2peak
255140_x_at | AT5G49080 | LL_LDHC | proline-rich extensin-like family protein, contains proline-rich extensin domains, INTERPRO:IPR002965; | 4 | 2peak
259899_at | AT1G71210 | LL_LDHC | pentatricopeptide (PPR) repeat-containing protein, contains [NAME] profile PF01535: PPR repeat | 5 | 2peak
260234_at | AT1G74460 | LL_LDHC | GDSL-motif lipase/hydrolase family protein, similar to family II lipases EXL3 GI:15054386, EXL1 GI:15054382, EXL2 GI:15054384 from (Arabidopsis thaliana); contains [NAME] profile: PF00657 lipase/acylhydrolase with GDSL-like motif | 4 | 2peak
261626_at | AT1G01990 | LL_LDHC | expressed protein | 4 | 2peak
262349_at | AT2G48130 | LL_LDHC | protease inhibitor/seed storage/lipid transfer protein (LTP) family protein, contains [NAME] protease inhibitor/seed storage/LTP family domain PF00234 | 4 | 2peak
262886_at | AT1G14760 | LL_LDHC | expressed protein | 4 | 2peak
263605_at | [NAME] | LL_LDHC | SWIB complex BAF60b domain-containing protein / plus-3 domain-containing protein, contains [NAME] profiles PF02201: BAF60b domain of the SWIB complex, PF03126: Plus-3 domain | 5 | 2peak
265169_x_at | AT1G23720 | LL_LDHC | proline-rich extensin-like family protein, contains proline-rich extensin domains, INTERPRO:IPR002965 | 4 | 2peak
266967_at | [NAME] | LL_LDHC | integral membrane protein, putative, contains 3 transmembrane domains; contains [NAME] PF04535 : Domain of unknown function (DUF588); similar to putative ethylene responsive element binding protein (GI:22135858) (Arabidopsis thaliana) | 4 | 2peak
267114_at | AT2G14835 | LL_LDHC | zinc finger (C3HC4-type RING finger) family protein, contains [NAME] profile: PF00097 zinc finger, C3HC4 type (RING finger) | 5 | 2peak
246781_at | [NAME] | LLHC | SFP1__sugar-porter family protein 1 (SFP1), identical to sugar-porter family protein 1 (Arabidopsis thaliana) GI:14585699 | 4 | 2peak
248689_at | AT5G48150 | LLHC | PAT1__phytochrome A signal transduction 1 (PAT1) | 6 | 2peak
263267_at | AT2G16510 | LLHC | vacuolar ATP synthase 16 [NAME] proteolipid subunit 5 / V-ATPase 16 kDa proteolipid subunit 5 (AVAP5), identical to SP:P59227 Vacuolar ATP synthase 16 [NAME] proteolipid subunit 1/3/5 (EC 3.6.3.14) (V-ATPase 16 kDa proteolipid subunit 1/3/5) {Arabidopsis thaliana} GI:926929; contains [NAME] profile PF00137: ATP synthase subunit C | 2 | 2peak
246391_at | AT1G77350 | LL_LLHC | similar to Krtcap2 protein [Mus musculus] (GB:AAH43030.1); similar to keratinocytes associated protein 2 [Mus musculus] (GB:NP_079603.1); similar to ENSANGP00000016671 [Anopheles gambiae str. PEST] (GB:[NAME]) | 4 | 2peak
267235_at | AT2G43940 | LL_LLHC |  | 3 | 2peak
254329_at | At4g22540 | LDHH_ST | similar to oxysterol-binding family protein [Arabidopsis thaliana] (TAIR:At4g08180.2); similar to oxysterol-binding family protein [Arabidopsis thaliana] (TAIR:At4g08180.1); similar to oxysterol-binding family protein [Arabidopsis thaliana] (TAIR:At4g08180.3); similar to oxysterol-binding family protein [Arabidopsis thaliana] (TAIR:At2g31020.1); similar to oxysterol-binding family protein [Arabidopsis thaliana] (TAIR:At4g12460.1); similar to putative oxysterol binding protein [Oryza sativa (japonica cultivar-group)] (GB:AAM97165.2); similar to putative oxysterol-binding protein [Oryza sativa (japonica cultivar-group)] (GB:AAP54957.1); contains InterPro domain Oxysterol-binding protein (InterPro:IPR000648) | 7 | 2peak
261785_at | At1g08230 | LDHH_ST | ATGAT1_GAT1__amino acid transporter family protein, low similarity to amino acid permease (Oryza sativa) GI:7415521; contains [NAME] profile PF01490: [NAME] amino acid transporter protein | 0 | 2peak
262656_at | At1g14200 | LDHH_ST | zinc finger (C3HC4-type RING finger) family protein, contains [NAME] profile: PF00097 zinc finger, C3HC4 type (RING finger) | 0 | 2peak
257690_at | At3g12830 | LDHH_ST | auxin-responsive family protein, similar to auxin-induced protein (SP:P33082) (Glycine max) | 0 | 2peak
264767_at | At1g61380 | LDHH_ST | S-locus protein kinase, putative, similar to KI domain interacting kinase 1 ([NAME] mays) gi:2735017:[NAME]:AAB93834; contains S-locus glycoprotein family domain, [NAME]:PF00954 | 8 | 2peak
249736_at | At5g24460 | LDHH_ST | expressed protein | 3 | 2peak
255230_at | At4g05390 | LDHH_ST | ATRFNR1__ferredoxin--NADP(+) reductase, putative / adrenodoxin reductase, putative, strong similarity to SP:P41345 [NAME]--NADP reductase, root isozyme, chloroplast precursor (EC 1.18.1.2) (FNR) {Oryza sativa}, ferredoxin-NADP reductase precursor ([NAME] mays) GI:500751 | 10 | 2peak
263556_at | At2g16350 | LDHH_ST | F-box family protein, contains [NAME]:PF00646 F-box domain | 9 | 2peak
255503_at | At4g02420 | LDHH_ST | [NAME], putative, similar to receptor [NAME] kinase 3 (Arabidopsis thaliana) gi:4100060:gb:AAD00733; contains protein kinase domain, Pfam:PF00069; contains legume lectins alpha and beta domains, [NAME]:PF00138 and [NAME]:PF00139 | 0 | 2peak
252009_at | At3g52800 | LDHH_ST | zinc finger (AN1-like) family protein, contains [NAME] domain, PF01428: AN1-like Zinc finger | 0 | 2peak
261331_at | At1g44930 | LDHH_ST | expressed protein | 5 | 2peak
256455_at | At1g75190 | LDHH_ST | expressed protein | 2 | 2peak
266291_at | At2g29320 | LDHH_ST | tropinone reductase, putative / tropine dehydrogenase, putative, similar to tropinone reductase SP:P50165 from ([NAME] stramonium) | 11 | 2peak
247780_at | At5g58770 | LDHH_ST | dehydrodolichyl diphosphate synthase, putative / DEDOL-PP synthase, putative, similar to GI:796076 | 1 | 2peak
266261_at | At2g27580 | LDHH_ST | zinc finger (AN1-like) family protein, contains [NAME] domains, PF01428: AN1-like Zinc finger and PF01754: A20-like zinc finger | 1 | 2peak
254073_at | At4g25500 | LDHH_ST | ATRSP35_ATRSP40_AT-SRP40__arginine/serine-rich splicing factor [NAME]), identical to SP:P92965 Arginine/serine-rich splicing factor [NAME] thaliana} | 2 | 2peak
246371_at | At1g51940 | LDHH_ST | protein kinase family protein / peptidoglycan-binding LysM domain-containing protein, contains protein kinases ATP-binding region signature, PROSITE:PS00107 | 1 | 2peak
262098_at | At1g56170 | LDHH_ST | HAP5B__transcription factor, putative, similar to Transcription factor [NAME]:CAA74053 GI:2398533 from (Arabidopsis thaliana) similarity to transcription factor Hap5a similar to transcription factor Hap5a (Arabidopsis thaliana)(GI:6523090) | 1 | 2peak
253861_at | At4g27680 | LDHH_ST | MSP1 protein, putative / intramitochondrial sorting protein, putative, similar to Swiss-Prot:P28737 MSP1 protein (TAT-binding homolog 4) (Saccharomyces cerevisiae); contains [NAME] domain, PF00004: ATPase, AAA family | 0 | 2peak
249742_at | At5g24490 | LDHH_ST | 30S ribosomal protein, putative, similar to SP:P19954 Plastid-specific 30S ribosomal protein 1, chloroplast precursor (CS-S5) (CS5) (S22) (Ribosomal protein 1) (PSRP-1) {[NAME] oleracea}; contains [NAME] profile PF02482: Sigma 54 modulation protein / S30EA ribosomal protein | 2 | 2peak
250883_at | At5g03970 | LDHH_ST | similar to F-box family protein [Arabidopsis thaliana] (TAIR:At5g07610.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:AAP52196.1); similar to putative F-Box protein [Solanum demissum] (GB:AAT38719.1); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810); contains InterPro domain F-box protein interaction domain (InterPro:IPR006527) | 6 | 2peak
257516_at | At1g69040 | LDHH_ST | ACR4_ACT REPEAT 4__ACT domain containing protein (ACR4), low similarity to uridylyltransferase (Gluconacetobacter diazotrophicus) GI:17226253; contains [NAME] profile PF01842: ACT domain | 0 | 2peak
257175_s_at | At3g23470 | LDHH_ST | similar to cyclopropane fatty acid synthase, putative / CPA-FA synthase, putative [Arabidopsis thaliana] (TAIR:At3g23510.1); similar to cyclopropane fatty acid synthase-related [Arabidopsis thaliana] (TAIR:At3g23480.1); similar to cyclopropane fatty acid synthase, putative / CPA-FA synthase, putative [Arabidopsis thaliana] (TAIR:At3g23530.1); similar to putative cyclopropane synthase [Oryza sativa (japonica cultivar-group)] (GB:XP_478073.1); contains InterPro domain Cyclopropane-fatty-acyl-phospholipid synthase (InterPro:IPR003333); contains InterPro domain [NAME] (and some other nucleotide) binding motif (InterPro:IPR000051) | 7 | 2peak
247772_at | At5g58610 | LDHH_ST | PHD finger transcription factor, putative | 5 | 2peak
253971_at | At4g26530 | LDHH_ST | similar to fructose-bisphosphate aldolase, cytoplasmic [Arabidopsis thaliana] (TAIR:At4g26520.1); similar to fructose-bisphosphate aldolase [Glycine max] (GB:AAR86689.1); similar to fructose 1,6, bisphosphate aldolase [[NAME] herbacea] (GB:AAR84667.1); contains InterPro domain Fructose-bisphosphate aldolase, class-I (InterPro:IPR000741) | 0 | 2peak
247395_at | At5g62910 | LDHH_ST | expressed protein, predicted proteins, Arabidopsis thaliana | 9 | 2peak
263184_at | At1g05560 | LDHH_ST | UGT1_UGT75B2__UDP-glucose transferase (UGT75B2), similar to UDP-glucose:indole-3-acetate beta-D-glucosyltransferase GI:2149127 from (Arabidopsis thaliana); identical to cDNA UDP-glucosyltransferase (UGT75B2) GI:13661274 | 0 | 2peak
254276_at | At4g22820 | LDHH_ST | zinc finger (AN1-like) family protein, contains [NAME] domains, PF01428: AN1-like Zinc finger and PF01754: A20-like zinc finger | 0 | 2peak
262868_at | At1g64980 | LDHH_ST | expressed protein | 3 | 2peak
246532_at | At5g15870 | LDHH_ST | glycosyl hydrolase family 81 protein, similar to beta-glucan-elicitor receptor GI:1752734 from (Glycine max) | 0 | 2peak
258110_at | At3g14610 | LDHH_ST | CYP72A7__cytochrome P450, putative, similar to [NAME]:Q05047 from (Catharanthus roseus) | 6 | 2peak
260397_at | At1g69680 | LDHH_ST | expressed protein, similar to MOG1 isoform A (GI:9864064) (Homo sapiens) | 4 | 2peak
257461_at | At1g75470 | LDHH_ST | ATPUP15__purine permease-related, contains [NAME] profile PF03151: Domain of unknown function, DUF250; low similarity to purine permease (Arabidopsis thaliana) [NAME] | 4 | 2peak
250524_at | At5g08520 | LDHH_ST | [NAME] family transcription factor, contains [NAME] profile: PF00249 myb-like DNA-binding domain | 1 | 2peak
265884_at | At2g42320 | LDHH_ST | expressed protein, similar to expressed protein [Arabidopsis thaliana] (TAIR:At3g57780.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:[NAME]) | 5 | 2peak
245584_at | At4g14940 | LDHH_ST | ATAO1__copper amine oxidase, putative, highly similar to copper amine oxidase (Arabidopsis thaliana) gi:2654118:gb:AAB87690 | 3 | 2peak
256220_at | At1g56230 | LDHH_ST | expressed protein | 0 | 2peak
265070_at | At1g55510 | LDHH_ST | BCDH BETA1__2-oxoisovalerate dehydrogenase, putative / 3-methyl-2-oxobutanoate dehydrogenase, putative / branched-chain alpha-keto acid dehydrogenase E1 beta subunit, putative, strong similarity to branched chain alpha-keto acid dehydrogenase E1 beta subunit (Arabidopsis thaliana) GI:7021286; contains [NAME] profiles PF02779: Transketolase, pyridine binding domain, PF02780: Transketolase, C-terminal domain | 3 | 2peak
267138_s_at | At2g38210 | LDHH_ST | ethylene-responsive protein, putative, very strong similarity to ethylene-inducible protein HEVER SP:Q39963 from (Hevea brasiliensis) | 1 | 2peak
260290_at | At1g80510 | LDHH_ST | amino acid transporter family protein, similar to amino acid transporter system [NAME] (Rattus norvegicus) GI:14578932; contains [NAME] profile PF01490: [NAME] amino acid transporter protein | 5 | 2peak
254296_at | At4g23090 | LDHH_ST | expressed protein | 0 | 2peak
246214_at | At4g36990 | LDHH_ST | HSF4_AT-HSFB1_HSFB1__heat shock factor protein 4 (HSF4) / heat shock transcription factor 4 (HSTF4), identical to heat shock transcription factor 4 (HSF4) SP:Q96320 from (Arabidopsis thaliana) | 4 | 2peak
253153_at | At4g35700 | LDHH_ST | zinc finger (C2H2 type) family protein, contains [NAME] domain, PF00096: Zinc finger, C2H2 type | 0 | 2peak
258949_at | At3g01370 | LDHH_ST | expressed protein, contains [NAME] domain, PF04581: Protein of unknown function (DUF578) | 7 | 2peak
250105_at | At5g16630 | LDHH_ST | similar to PREDICTED: similar to DNA-repair protein complementing XP-C cells homolog (Xeroderma pigmentosum group C complementing protein homolog) (p125) [Rattus norvegicus] (GB:XP_232194.2); contains InterPro domain DNA repair protein Rad4 (InterPro:IPR004583) | 4 | 2peak
247172_at | At5g65550 | LDHH_ST | UDP-glucoronosyl/UDP-glucosyl transferase family protein, contains [NAME] profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase ;similar to flavonol 3-O-glucosyltransferase (anthocyanin rhamnosyl transferase) from Petunia hybrida (SP:Q43716) | 11 | 2peak
247488_at | At5g61820 | LDHH_ST | expressed protein, MtN19, Medicago truncatula, EMBL:MTY15367 | 6 | 2peak
246952_at | At5g04820 | LDHH_ST | ATOFP13_OFP13__ovate family protein, 62% similar to ovate protein (GI:23429649) (Lycopersicon esculentum); contains TIGRFAM TIGR01568 : uncharacterized plant-specific domain TIGR01568 | 1 | 2peak
251246_at | At3g62100 | LDHH_ST | IAA30__auxin-responsive protein, putative, similar to SP:O24410 Auxin-responsive protein IAA20 (Indoleacetic acid-induced protein 20) {Arabidopsis thaliana}; contains [NAME] profile: PF02309: AUX/IAA family | 1 | 2peak
247682_at | At5g59650 | LDHH_ST | leucine-rich repeat protein kinase, putative, contains leucine rich repeat (LRR) domains, [NAME]:PF00560; contains protein kinase domain, Pfam:PF00069 | 5 | 2peak
256001_at | At1g29850 | LDHH_ST | double-stranded DNA-binding family protein, contains [NAME] profile: PF01984 double-stranded DNA-binding domain | 11 | 2peak
249999_at | At5g18640 | LDHH_ST | lipase class 3 family protein, low similarity to [NAME] (E.C.3.1.1.3) (Rhizomucor miehei) GI:230348; contains [NAME] profile PF01764: Lipase | 2 | 2peak
260975_at | At1g53430 | LDHH_ST | leucine-rich repeat family protein / protein kinase family protein, contains [NAME] domains PF00560: Leucine Rich Repeat and PF00069: Protein kinase domain | 5 | 2peak
253768_at | At4g28550 | LDHH_ST | RabGAP/TBC domain-containing protein, similar to SP:P09379 GTPase-activating protein GYP7 (Fragment) {Yarrowia lipolytica}; contains [NAME] profile PF00566: TBC domain | 2 | 2peak
254331_s_at | At4g22710 | LDHH_ST | CYP706A1__cytochrome P450 family protein, flavonoid 3',5'-hydroxylase Hf1, Petunia x hybrida, PIR2:S38985 | 11 | 2peak
261185_at | At1g34540 | LDHH_ST | CYP94D1__cytochrome P450 family protein, similar to Cytochrome P450 94A1 (P450-dependent fatty acid omega-hydroxylase) (SP:O81117) {[NAME] sativa}; contains [NAME] profile: PF00067 cytochrome P450 | 0 | 2peak
257037_at | At3g19130 | LDHH_ST | ATRBP47B__RNA-binding protein, putative, similar to RNA [NAME] 47 (Nicotiana plumbaginifolia) GI:9663769, DNA binding protein ACBF GB:AAC49850 from (Nicotiana tabacum); contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM) | 7 | 2peak
248563_at | At5g49690 | LDHH_ST | UDP-glucoronosyl/UDP-glucosyl transferase family protein, contains [NAME] profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase | 4 | 2peak
254421_at | At4g21550 | LDHH_ST | transcriptional factor B3 family protein, low similarity to SP:Q01593 Abscisic acid-insensitive protein 3 {Arabidopsis thaliana}, SP:P37398 Viviparous protein homolog {Oryza sativa}; contains [NAME] profile PF02362: B3 DNA binding domain | 5 | 2peak
254390_at | At4g21940 | LDHH_ST | CPK15__calcium-dependent protein kinase, putative / CDPK, putative, similar to calcium-dependent protein kinase (Nicotiana tabacum) gi:3283996:gb:AAC25423 | 4 | 2peak
262431_at | At1g47540 | LDHH_ST | [NAME], putative, similar to SP:P26780 Trypsin inhibitor 2 precursor (MTI-2) {Sinapis alba} | 5 | 2peak
245662_at | At1g28190 | LDHH_ST | expressed protein | 2 | 2peak
265276_at | At2g28400 | LDHH_ST | expressed protein, contains [NAME] profile PF04520: Protein of unknown function, [NAME] | 0 | 2peak
245590_at | At4g15060 | LDHH_ST | F-box protein-related, contains weak similarity to F-box domain [NAME]:PF00646 | 11 | 2peak
260032_at | At1g68750 | LDHH_ST | ATPPC4__phosphoenolpyruvate carboxylase family protein / PEP carboxylase family protein, similar to SP:P51059 Phosphoenolpyruvate carboxylase 2 (EC 4.1.1.31) (PEPCASE) {[NAME] mays}; contains [NAME] profile PF00311: phosphoenolpyruvate carboxylase | 11 | 2peak
248897_at | At5g46360 | LDHH_ST | KCO3__outward rectifying potassium channel, putative ([NAME]), identical to [NAME] (Arabidopsis thaliana) gi:4583550:emb:CAB40380; similar to kco1 (Arabidopsis thaliana) gi:2230761:emb:CAA69158; member of the 2 pore, 4 transmembrane (2P/4TM) K+ channel family, PMID:11500563 | 7 | 2peak
248522_at | At5g50565 | LDHH_ST | expressed protein | 1 | 2peak
253483_at | At4g31910 | LDHH_ST | transferase family protein, low similarity to anthranilate N-hydroxycinnamoyl/benzoyltransferase [NAME] caryophyllus GI:3288180, 10-deacetylbaccatin III-10-O-acetyl transferase Taxus cuspidata GI:6746554; contains [NAME] profile PF02458 transferase family | 4 | 2peak
264672_at | [NAME] | LDHH_ST | chloroplast nucleoid DNA-binding protein-related, contains [NAME] profile PF00026: Eukaryotic aspartyl protease;b similar to CND41, chloroplast nucleoid DNA binding protein (GI:2541876) (Nicotiana tabacum) | 1 | 2peak
250900_at | At5g03470 | LDHH_ST | ATB' ALPHA__serine/threonine protein phosphatase 2A ([NAME]) regulatory subunit B' (B'alpha), similar to SWISS-PROT:Q28653 serine/threonine protein phosphatase 2A, 56 [NAME] regulatory subunit, delta isoform ([NAME], B subunit, B' delta isoform, [NAME], B subunit, B56 delta isoform, [NAME], B subunit, PR61 delta isoform, [NAME], B subunit, R5 delta isoform, [NAME], B subunit, B'-gamma) (Oryctolagus cuniculus); contains [NAME] domain, PF01603: Protein phosphatase 2A regulatory B subunit (B56 family) | 8 | 2peak
259342_at | At3g03890 | LDHH_ST | expressed protein | 0 | 2peak
253635_at | At4g30620 | LDHH_ST | expressed protein, contains [NAME] domain PF02575: Uncharacterized BCR, YbaB family [NAME]; contains similarity to complex interacting protein 9 (CIP9) GI: 32892212 | 2 | 2peak
254520_at | At4g19960 | LDHH_ST | potassium transporter family protein, similar to potassium transporter (Arabidopsis thaliana) [NAME]:gb:AAB87687; KUP/HAK/[NAME] family member, PMID:11500563; contains [NAME] profile PF02705: K+ potassium transporter | 8 | 2peak
258943_at | At3g10400 | LDHH_ST | RNA recognition motif (RRM)-containing protein, low similarity to splicing factor SC35 (Arabidopsis thaliana) GI:9843653; contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM) | 0 | 2peak
259619_at | At1g42980 | LDHH_ST |  | 11 | 2peak
262032_at | At1g37150 | LL23_LDHH | holocarboxylase synthetase 2 (HCS2.d), identical to holocarboxylase synthetase hcs2.d (Arabidopsis thaliana) GI:19698373; contains non-consensus GG acceptor splice sites; contains [NAME] profile PF03099: Biotin/lipoate A/B protein ligase family; contains TIGRfam profile TIGR00121: biotin--acetyl-CoA-carboxylase ligase; | 0 | 2peak
254079_at | At4g25730 | LL23_LDHH | FtsJ-like methyltransferase family protein, contains [NAME] profile: PF01728 FtsJ-like methyltransferase | 4 | 2peak
246050_s_at | At5g28900 | LL23_LDHH | calcium-binding EF hand family protein, contains [NAME] profile: PF00036 EF hand | 2 | 2peak
254179_at | At4g23910 | LL23_LDHH | expressed protein, various predicted proteins, Arabidopsis thaliana | 6 | 2peak
261298_at | At1g48510 | LL23_LDHH | cytochrome c oxidase assembly protein surfeit-related, contains similarity to Swiss-Prot:Q9QXU2 surfeit locus protein 1 (Rattus norvegicus) | 0 | 2peak
256910_at | At3g24080 | LL23_LDHH | KRR1 family protein, contains [NAME] PF05178: Krr1 family | 4 | 2peak
252289_at | At3g49130 | LL23_LDHH | expressed protein | 0 | 2peak
261315_at | At1g53170 | LL23_LDHH | ATERF8_ATERF-8__encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family ([NAME]). The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole. | 1 | 2peak
245718_at | At5g04100 | LL23_LDHH | DNA topoisomerase II family protein, siimilar to DNA topoisomerase II subunit B (Thermotoga maritima) GI:1622792; contains [NAME] profiles PF00204: DNA topoisomerase II (N-terminal region), PF00249: Myb-like DNA-binding domain | 5 | 2peak
250071_at | At5g18000 | LL23_LDHH | transcriptional factor B3 family protein, contains [NAME] profile PF02362: B3 DNA binding domain | 0 | 2peak
251506_at | At3g59090 | LL23_LDHH | similar to transmembrane protein-related (TOM1) [Arabidopsis thaliana] (TAIR:At4g21790.1); similar to P0046E05.19 [Oryza sativa (japonica cultivar-group)] (GB:NP_916134.1) | 11 | 2peak
251331_s_at | At3g61650 | LL23_LDHH | tubulin gamma-1 chain / gamma-1 tubulin (TUBG1), identical to SP:P38557 Tubulin gamma-1 chain (Gamma-1 tubulin) {Arabidopsis thaliana} | 4 | 2peak
245839_at | At1g58390 | LL23_LDHH | disease resistance protein (CC-NBS-LRR class), putative, domain signature CC-NBS-LRR exists, suggestive of a disease resistance protein. | 11 | 2peak
263054_at | At2g04620 | LL23_LDHH | cation efflux family protein, potential member of the cation diffusion facilitator (CDF) family, or cation efflux (CE) family, see PMID:11500563 | 4 | 2peak
257813_at | At3g25100 | LL23_LDHH | CDC45__cell division control protein-related, contains weak similarity to cell division control protein 45 homolog (Suppressor of nda4 protein) (Swiss-Prot:O74113) (Schizosaccharomyces pombe) | 2 | 2peak
250294_at | At5g13380 | LL23_LDHH | auxin-responsive GH3 family protein, similar to auxin-responsive GH3 product (Glycine max) GI:18591; contains [NAME] profile PF03321: GH3 auxin-responsive promoter | 4 | 2peak
263115_at | At1g03055 | LL23_LDHH | expressed protein | 0 | 2peak
247250_at | At5g64630 | LL23_LDHH | FAS2_MUB3_NFB01_NFB1__transducin family protein / WD-40 repeat family protein, Similar to (SP:Q13112) Chromatin assembly factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) (Homo sapiens) | 2 | 2peak
262027_at | At1g35516 | LL23_LDHH | HOS10_MYB8__myb family transcription factor (MYB8), similar to DNA-binding protein GB:AAA98761 GI:1020155 from (Arabidopsis thaliana) | 5 | 2peak
264621_at | At2g17700 | LL23_LDHH | protein kinase family protein, similar to protein kinase (gi:170047) from Glycine max; contains a protein kinase domain profile (PDOC00100) (PF00069) | 4 | 2peak
258414_at | At3g17380 | LL23_LDHH | meprin and TRAF homology domain-containing protein / MATH domain-containing protein, similar to ubiquitin-specific protease 12 (Arabidopsis thaliana) GI:11993471; contains [NAME] profile PF00917: MATH domain | 7 | 2peak
245009_at | rps4.chloroplast | LL23_LDHH | RPS4__Chloroplast encoded ribosomal protein S4 | 3 | 2peak
251697_at | At3g56600 | LL23_LDHH | phosphatidylinositol 3- and 4-kinase family protein, low similarity to 55 kDa type II phosphatidylinositol 4-kinase (Rattus norvegicus) GI:13660755; contains [NAME] profile PF00454: Phosphatidylinositol 3- and 4-kinase | 0 | 2peak
256864_at | At3g23890 | LL23_LDHH | TOPII__DNA topoisomerase, ATP-hydrolyzing / DNA topoisomerase II / DNA gyrase (TOP2), identical to SP:P30182 DNA topoisomerase II (EC 5.99.1.3) {Arabidopsis thaliana} | 3 | 2peak
250341_at | At5g11850 | LL23_LDHH | protein kinase family protein, contains [NAME] domain, PF00069: Protein kinase domain; identical to cDNA MAP3K delta-1 protein kinase GI:2253009 | 1 | 2peak
259719_at | At1g61070 | LL23_LDHH | LCR66_PDF2.4__plant defensin-fusion protein, putative (PDF2.4), plant [NAME] member, personal communication, [NAME] ([NAME]); contains gamma-thionin domain | 0 | 2peak
253396_at | At4g32720 | LL23_LDHH | similar to La domain-containing protein [Arabidopsis thaliana] (TAIR:At1g79880.1); similar to putative RNA recognition motif (RRM)-containing protein [Oryza sativa (japonica cultivar-group)] (GB:XP_466667.1); contains InterPro domain RNA-binding protein [NAME] (InterPro:IPR006630); contains InterPro domain [NAME] protein (InterPro:[NAME]); contains InterPro domain RNA-binding region RNP-1 (RNA recognition motif) (InterPro:IPR000504) | 10 | 2peak
257898_s_at | At3g30670 | LL23_LDHH |  | 0 | 2peak
247116_at | At5g65970 | LL23_LDHH | MLO10__seven transmembrane MLO family protein / MLO-like protein 10 (MLO10), identical to membrane protein Mlo10 (Arabidopsis thaliana) gi:14091590:gb:AAK53803; similar to MLO protein SWISS-PROT:P93766, [NAME] (Hordeum vulgare)(Barley) | 0 | 2peak
258926_s_at | At3g10490 | LL23_LDHH | ANAC050__no apical meristem (NAM) family protein, similar to to [NAME] (GI:645671) (Arabidopsis thaliana); contains [NAME] PF02365: No apical meristem (NAM) protein; N-terminus similar to unknown protein GB:AAD25613 (Arabidopsis thaliana) | 0 | 2peak
251104_at | At5g01720 | LL23_LDHH | F-box family protein (FBL3), contains similarity to leucine-rich repeats containing F-box protein FBL3 GI:5919219 from (Homo sapiens) | 5 | 2peak
256359_at | At1g66460 | LL23_LDHH | protein kinase family protein, contains [NAME] profile: PF00069: Eukaryotic protein kinase domain | 3 | 2peak
253826_s_at | At4g27960 | LL23_LDHH | UBC9__ubiquitin-conjugating enzyme E2-17 kDa 9 (UBC9), E2; identical to gi:297883, SP:P35132; identical to cDNA UBC9 for ubiquitin conjugating enzyme homolog GI:297883 | 0 | 2peak
261090_at | At1g07560 | LL23_LDHH | leucine-rich repeat protein kinase, putative, similar to light repressible receptor protein kinase (Arabidopsis thaliana) gi:1321686:emb:CAA66376; contains leucine rich repeat (LRR) domains, [NAME]:PF00560; contains protein kinase domain, Pfam:PF00069 | 0 | 2peak
265310_at | At2g20280 | LL23_LDHH | zinc finger (CCCH-type) family protein, contains [NAME] domain, PF00642: Zinc finger C-x8-C-x5-C-x3-H type (and similar) | 4 | 2peak
257676_at | At3g20320 | LL23_LDHH | mce-related family protein, contains [NAME] PF02470: mce related protein | 0 | 2peak
265662_at | At2g24500 | LL23_LDHH | FZF__zinc finger (C2H2 type) family protein, contains [NAME] profile: PF00096 zinc finger, C2H2 type | 4 | 2peak
250487_at | At5g09690 | LL23_LDHH | magnesium transporter CorA-like family protein (MRS2-7), weak similarity to SP:Q01926 RNA splicing protein MRS2, mitochondrial precursor {Saccharomyces cerevisiae}; contains [NAME] profile PF01544: CorA-like Mg2+ transporter protein | 0 | 2peak
264283_at | At1g61850 | LL23_LDHH | [NAME] family protein, similar to membrane-associated calcium-independent phospholipase A2 gamma; IPLA2 gamma (Homo sapiens) GI:8453174; contains [NAME] domain PF01734, PF00514: Armadillo/beta-catenin-like repeat | 2 | 2peak
256661_at | At3g11964 | LL23_LDHH | [NAME] domain-containing protein, similar to SP:Q05022 rRNA biogenesis protein RRP5 {Saccharomyces cerevisiae}; contains [NAME] profile PF00575: [NAME] binding domain | 4 | 2peak
255784_at | At1g19860 | LL23_LDHH | zinc finger (CCCH-type) family protein, contains [NAME] domain, PF00642: Zinc finger C-x8-C-x5-C-x3-H type (and similar) | 4 | 2peak
246628_at | At1g48900 | LL23_LDHH | signal recognition particle 54 kDa protein 3 / SRP54 (SRP-54C), identical to SP:P49967 Signal recognition particle 54 kDa protein 3 (SRP54) {Arabidopsis thaliana} | 4 | 2peak
248057_at | At5g55520 | LL23_LDHH | similar to expressed protein [Arabidopsis thaliana] (TAIR:At4g26660.1); similar to kinesin heavy chain, putative [Oryza sativa (japonica cultivar-group)] (GB:AAV35794.1) | 2 | 2peak
249002_at | At5g44520 | LL23_LDHH | ribose 5-phosphate isomerase-related, low similarity to SP:P47968 Ribose 5-phosphate isomerase (EC 5.3.1.6) (Phosphoriboisomerase) {Mus musculus} | 4 | 2peak
257027_at | At3g19210 | LL23_LDHH | DNA repair protein RAD54, putative, similar to RAD54 [NAME]:CAA71278 from (Drosophila melanogaster) ([NAME]. Cell. [NAME]) 17 (10), 6097-6104) | 2 | 2peak
253084_at | At4g36260 | LL23_LDHH | STY2_SRS2__zinc finger protein-related, similar to lateral root primordium 1 (LRP1) (Arabidopsis thaliana) GI:882341; contains [NAME] profile PF05142: Domain of unknown function (DUF702), TIGR01624: LRP1 C-terminal domain, TIGR01623: putative zinc finger domain, LRP1 type | 0 | 2peak
246724_at | At5g29000 | LL23_LDHH | [NAME] family transcription factor, contains [NAME] profile: PF00249 myb-like DNA-binding domain | 1 | 2peak
259399_at | At1g17710 | LL23_LDHH | similar to expressed protein [Arabidopsis thaliana] (TAIR:At1g73010.1); similar to putative phosphatase [Lycopersicon esculentum] (GB:CAD30863.1); contains InterPro domain HAD-superfamily subfamily IB hydrolase, hypothetical 1 (InterPro:IPR006384); contains InterPro domain HAD-superfamily hydrolase, subfamily IB (PSPase-like) (InterPro:IPR006383) | 4 | 2peak
262388_at | At1g49320 | LL23_LDHH | BURP domain-containing protein, similarity to SP:Q08298 Dehydration-responsive protein RD22 precursor {Arabidopsis thaliana}; contains [NAME] profile PF03181: BURP domain | 0 | 2peak
247826_at | At5g58480 | LL23_LDHH | glycosyl hydrolase family 17 protein, similar to elicitor inducible chitinase Nt-SubE76 GI:11071974 from (Nicotiana tabacum) | 3 | 2peak
266375_at | At2g14630 | LL23_LDHH | hypothetical protein, contains [NAME] profile PF03004: Plant transposase (Ptta/En/Spm family) | 5 | 2peak
245962_at | At5g19700 | LL23_LDHH | MATE efflux protein-related, contains [NAME] profile PF01554: Uncharacterized membrane protein family | 0 | 2peak
255009_at | At4g10070 | LL23_LDHH | KH domain-containing protein, DNA-directed [NAME] polymerase (EC 2.7.7.6) II largestchain - mouse, PIR2:A28490 | 2 | 2peak
256200_at | At1g58210 | LL23_LDHH | EMB1674__kinase interacting family protein, similar to kinase interacting protein 1 (GI:13936326) {Petunia integrifolia} | 2 | 2peak
258314_at | At3g16100 | LL23_LDHH | Ras-related GTP-binding family protein, contains [NAME] profile: [NAME] family | 5 | 2peak
266025_at | At2g05960 | LL23_LDHH |  | 0 | 2peak
264576_at | At1g05360 | LL23_LDHH | expressed protein, Similar to Arabidopsis hypothetical protein PID:e326839 ([NAME]:Z97337) contains transmembrane domains | 11 | 2peak
264105_x_at | At2g13760 | LL23_LDHH | hypothetical protein | 2 | 2peak
251496_at | At3g59040 | LL23_LDHH | pentatricopeptide (PPR) repeat-containing protein, contains [NAME] profile PF01535: PPR repeat | 3 | 2peak
256167_at | At1g36830 | LL23_LDHH |  | 1 | 2peak
267467_at | At2g30580 | LL23_LDHH | zinc finger (C3HC4-type RING finger) family protein, contains [NAME] profile: PF00097 zinc finger, C3HC4 type (RING finger) | 1 | 2peak
254489_at | At4g20800 | LL23_LDHH | FAD-binding domain-containing protein, similar to SP:P93479 [NAME] oxidase precursor (EC 1.5.3.9) (Berberine-bridge-forming enzyme) {Papaver somniferum}; contains [NAME] profile PF01565: FAD binding domain | 5 | 2peak
260436_at | At1g68140 | LL23_LDHH | expressed protein, similar to expressed protein [Arabidopsis thaliana] (TAIR:At1g77770.2); similar to expressed protein [Arabidopsis thaliana] (TAIR:At1g77770.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:XP_466297.1) | 7 | 2peak
244955_at | At2g07737 | LL23_LDHH | ORF127__hypothetical protein | 0 | 2peak
248984_at | At5g45140 | LL23_LDHH | NRPC2__similar to DNA-directed RNA polymerase II 135 kDa polypeptide / RNA polymerase II subunit 2 (RPB135) (RPB2) (RP140) [Arabidopsis thaliana] (TAIR:At4g21710.1); similar to hypothetical protein [Homo sapiens] (GB:CAD97689.1); similar to SPAC4G9.08c [Schizosaccharomyces pombe] (GB:CAA93558.1); similar to RNA polymerase III subunit RPC2 [Homo sapiens] (GB:AAM18214.1); similar to unnamed protein product [Tetraodon nigroviridis] (GB:CAG03415.1); similar to Polymerase (RNA) III (DNA directed) polypeptide B [Homo sapiens] (GB:AAH46238.1); contains InterPro domain RNA polymerase [NAME], domain 3 (InterPro:IPR007645); contains InterPro domain RNA polymerase [NAME], domain 7 (InterPro:IPR007641); contains InterPro domain RNA polymerase [NAME], domain 4 (InterPro:IPR007646); contains InterPro domain RNA polymerase beta subunit (InterPro:IPR007644); contains InterPro domain RNA polymerase [NAME], domain 2 (InterPro:IPR007642); contains InterPro domain RNA polymerase [NAME], domain 6 (InterPro:IPR007120); contains InterPro domain RNA polymerase [NAME], domain 5 (InterPro:IPR007647); contains InterPro domain [NAME] polymerase, beta subunit (InterPro:IPR007121) | 4 | 2peak
244993_s_at | ycf1.1 | LL23_LDHH | YCF1.1__hypothetical protein | 4 | 2peak
259582_at | At1g28060 | LL23_LDHH | small nuclear ribonucleoprotein family protein / snRNP family protein, contains similarity to U4/U6 small nuclear ribonucleoprotein hPrp3 (Homo sapiens) gi:2708307:gb:AAC51926 | 3 | 2peak
259372_at | At1g69120 | LL23_LDHH | AP1__floral homeotic protein APETALA1 (AP1) / agamous-like MADS box protein (AGL7), identical to SP:P35631 Floral homeotic protein APETALA1 (AGL7 protein) {Arabidopsis thaliana} | 0 | 2peak
246457_at | At5g16750 | LL23_LDHH | TOZ__transducin family protein / WD-40 repeat family protein, contains 8 WD-40 repeats (PF00400); similar to transducin homolog sazD - Homo sapiens, EMBL:U02609 | 3 | 2peak
256360_at | At1g66440 | LL23_LDHH | DC1 domain-containing protein, contains [NAME] protein PF03107 DC1 domain | 0 | 2peak
257097_at | At3g30830 | LL23_LDHH |  | 5 | 2peak
265059_at | [NAME] | LL23_LDHH | AR791__actin binding protein family, contains Prosite PS00019: Actinin-type actin-binding domain signature 1; similar to actin binding protein (GI:28071265) (Arabidopsis thaliana); similar to A-type inclusion protein (ATI) (Swiss-Prot:P16602) (Cowpox virus) | 4 | 2peak
264748_at | At1g70070 | LL23_LDHH | PDE317__DEAD/DEAH box helicase, putative, similar to SP:P35207 Antiviral protein SKI2 {Saccharomyces cerevisiae}; contains [NAME] profiles PF00270: DEAD/DEAH box helicase, PF00271: Helicase conserved C-terminal domain | 4 | 2peak
250126_at | At5g16310 | LL23_LDHH | [NAME] hydrolase family 1 protein, similar to 26S proteasome regulatory complex subunit p37A (Drosophila melanogaster) [NAME]; contains [NAME] profile PF01088: Ubiquitin carboxyl-terminal hydrolase, family 1 | 0 | 2peak
249479_at | At5g38960 | LL23_LDHH | germin-like protein, putative, similar to germin-like protein subfamily 1 member 8 (SP:Q9LEA7); contains PS00725 germin family signature | 2 | 2peak
258551_at | At3g06890 | LL23_LDHH | expressed protein | 8 | 2peak
259605_at | At1g27910 | LL23_LDHH | U-box domain-containing protein, contains [NAME] profile PF04564: U-box domain | 0 | 2peak
257835_at | At3g25180 | LL23_LDHH | CYP82G1__cytochrome P450 family protein, similar to cytochrome P450 monooxygenase [NAME]:AAC49188 (Pisum sativum); contains [NAME] profile: PF00067 cytochrome P450 | 0 | 2peak
259257_at | At3g07760 | LL23_LDHH | expressed protein | 10 | 2peak
262992_at | At1g54210 | LL23_LDHH | ATG12a_APG12__autophagy 12a (APG12a), identical to autophagy 12a (Arabidopsis thaliana) GI:19912169 | 5 | 2peak
264794_at | At1g08670 | LL23_LDHH | epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-related, contains [NAME] PF01417: ENTH domain. ENTH (Epsin N-terminal homology) domain;similar to epsin 2b (GI:3894397) (Homo sapiens) | 1 | 2peak
261187_at | At1g32860 | LL23_LDHH | glycosyl hydrolase family 17 protein, similar to beta-1,3-glucanase precursor GI:4097948 from (Oryza sativa) | 3 | 2peak
265131_at | At1g23760 | LL23_LDHH | JP630__BURP domain-containing protein / polygalacturonase, putative, similar to polygalacturonase isoenzyme 1 beta subunit (Lycopersicon esculentum) GI:170480; contains [NAME] profile PF03181: BURP domain | 8 | 2peak
245372_at | At4g15000 | LL23_LDHH | 60S ribosomal protein L27 (RPL27C) | 0 | 2peak
263817_at | At2g10070 | LL23_LDHH | expressed protein, very low similarity to AHM1 (Triticum aestivum) GI:6691467 | 0 | 2peak
250715_at | At5g06160 | LL23_LDHH | splicing factor-related, contains some similarity to splicing factor SP:Q12874 from (Homo sapiens) | 5 | 2peak
256382_at | At1g66860 | LL23_LDHH | expressed protein, similar to Hypothetical protein RP404. (Swiss-Prot:Q9ZDC7) (Rickettsia prowazekii); similar to Hypothetical protein yvdE homolog (Fragment) (Swiss-Prot:P22347) (Lactococcus lactis) | 0 | 2peak
248603_at | At5g49430 | LL23_LDHH | transducin family protein / WD-40 repeat family protein, similar to WD-repeat protein 9 (SP:Q9NSI6) {Homo sapiens}; contains [NAME] PF00400: WD domain, G-beta repeat (4 copies) | 5 | 2peak
261617_s_at | At1g33090 | LL23_LDHH | MATE efflux family protein, similar to ripening regulated protein DDTFR18 (Lycopersicon esculentum) GI:12231296; contains [NAME] profile PF01554: Uncharacterized membrane protein family | 11 | 2peak
249624_at | At5g37570 | LL23_LDHH | pentatricopeptide (PPR) repeat-containing protein, contains [NAME] profile PF01535: PPR repeat | 5 | 2peak
246767_at | At5g27390 | LL23_LDHH | expressed protein, CG6949 - Drosophila melanogaster, EMBL:AE003739 | 4 | 2peak
255399_at | At4g03750 | LL23_LDHH | hypothetical protein | 5 | 2peak
250729_at | At5g06460 | LL23_LDHH | ATUBA2__ubiquitin activating enzyme 2 (UBA2), E1; identical to gi:1703477 | 11 | 2peak
263604_s_at | At2g16330 | LL23_LDHH | hypothetical protein, includes At2g06610, At5g28266, At3g42620, At4g07696, At2g06690, At2g16160, [NAME], At2g12140, At1g45080, At2g16330 | 6 | 2peak
265764_at | At2g48050 | LL23_LDHH | expressed protein, ; expression supported by MPSS | 8 | 2peak
247595_at | At5g60820 | LL23_LDHH | zinc finger (C3HC4-type RING finger) family protein, contains [NAME] profile: PF00097 zinc finger, C3HC4 type (RING finger) | 2 | 2peak
265022_at | At1g24520 | LL23_LDHH | BCP1__anther-specific protein agp1, identical to agp1 GI:780177 from (Arabidopsis thaliana) | 5 | 2peak
252566_at | At3g46040 | LL23_LDHH | RPS15AD__Regulated by TCP20. | 4 | 2peak
248198_at | At5g54200 | LL23_LDHH | WD-40 repeat family protein, contains [NAME] PF00400: WD domain, G-beta repeat; similar to WD-repeat protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) (Homo sapiens) | 6 | 2peak
245723_at | At1g73400 | LL23_LDHH | pentatricopeptide (PPR) repeat-containing protein, contains [NAME] profile PF01535: PPR repeat | 11 | 2peak
261121_at | At1g75340 | LL23_LDHH | zinc finger (CCCH-type) family protein, weak similarity to Nucleoporin NUP42 (Nuclear pore protein NUP42) (Swiss-Prot:P49686) (Saccharomyces cerevisiae); contains [NAME] profile PF00642: Zinc finger C-x8-C-x5-C-x3-H type (and similar) | 3 | 2peak
248611_at | At5g49520 | LL23_LDHH | WRKY48__WRKY family transcription factor, contains [NAME] profile: PF03106 WRKY DNA -binding domain | 5 | 2peak
252055_at | At3g52580 | LL23_LDHH | 40S ribosomal protein S14 (RPS14C), ribosomal protein S14 -Zea mays,PIR2:A30097 | 7 | 2peak
264455_at | At1g10330 | LL23_LDHH | pentatricopeptide (PPR) repeat-containing protein, contains [NAME] profile PF01535: PPR repeat | 6 | 2peak
251876_at | At3g54280 | LL23_LDHH | SNF2 domain-containing protein / helicase domain-containing protein, similar to SP:O14981 TBP-associated factor 172 (TAF-172) (TAF(II)170) {Homo sapiens}; contains PFam profiles PF00271: Helicase conserved C-terminal domain, PF00176: SNF2 family N-terminal domain | 9 | 2peak
257820_at | At3g25220 | LL23_LDHH | FKBP15-1__FK506-binding protein 2-1 (FKBP15-1) / immunophilin / peptidyl-prolyl cis-trans isomerase / rotamase, identical to SP:Q38935 FK506-binding protein 2-1 precursor (EC 5.2.1.8) (Peptidyl-prolyl cis- trans isomerase) (PPiase) (Rotamase) (15 kDa FKBP) (FKBP-15-1) {Arabidopsis thaliana}, immunophilin (FKBP15-1) GB:U52046 (Arabidopsis thaliana) (Proc. Natl. Acad. [NAME]. U.S.A. 93 (14), 6964-6969 (1996)) | 0 | 2peak
261923_at | At1g22380 | LL23_LDHH | similar to UDP-glucose glucosyltransferase, putative [Arabidopsis thaliana] (TAIR:At1g78270.1); similar to UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis thaliana] (TAIR:At1g22340.1); similar to UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis thaliana] (TAIR:At1g22360.1); similar to UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis thaliana] (TAIR:At1g22400.1); similar to UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis thaliana] (TAIR:At1g22370.2); similar to glycosyltransferase NTGT5a [[NAME] tabacum] (GB:BAD93689.1); contains InterPro domain UDP-glucoronosyl/UDP-glucosyl transferase (InterPro:IPR002213) | 5 | 2peak
250634_at | At5g07480 | LL23_LDHH | oxidoreductase, 2OG-Fe(II) oxygenase family protein, similar to flavonol synthase 1 (SP:Q96330), 2-oxoglutarate-dependent dioxygenase - Solanum chacoense, EMBL:AF104925; contains PF03171 2OG-Fe(II) oxygenase superfamily domain | 1 | 2peak
249089_at | At5g44240 | LL23_LDHH | haloacid dehalogenase-like hydrolase family protein, similar to Potential phospholipid-transporting ATPase (EC 3.6.3.1) from {Mus musculus} SP:P70704, {[NAME] taurus} SP:Q29449; contains InterPro accession IPR005834: Haloacid dehalogenase-like hydrolase | 1 | 2peak
246619_at | At5g36290 | LL23_LDHH | expressed protein, contains [NAME] profile [NAME]: Uncharacterized protein family UPF0016 | 3 | 2peak
262628_at | At1g06490 | LL23_LDHH | ATGSL07_ATGSL7_GSL07__glycosyl transferase family 48 protein, contains [NAME] profile: PF02364 1,3-beta-glucan synthase | 3 | 2peak
249714_at | At5g35710 | LL23_LDHH |  | 11 | 2peak