Spreadsheet: 05a1ee18-f187-4156-bab3-e2611f303737
Sheet: Sheet1

Table S2: Distribution and annotation of the 173 distributed orthologous clusters in strains isolated from Patient19. | Unnamed: 1 | Unnamed: 2 | Unnamed: 3 | Unnamed: 4 | Unnamed: 5 | Unnamed: 6 | Unnamed: 7
47 of these vary within the ST13 strains (purple, pink, blue, yellow).
Gene ID | Contig | Position | Annotation | [NAME] |  | Legend:
CGSSp14BS292_00867 | 33 | complement(1117..1914) | integrase/recombinase, phage integrase family | ST13v1/ST13v6/ST13v12 |  |  | Distributed Cluster: ST13v1/ST13v6/ST13v12
CGSSp14BS292_02398 | 65 | 148667..148855 | ImpB/MucB/SamB family protein | ST13v1/ST13v6/ST13v12 |  |  | Distributed Cluster: ST2011v4
CGSSp14BS292_02403 | 65 | 148852..149097 | ImpB/MucB/SamB family protein | ST13v1/ST13v6/ST13v12 |  |  | Distributed Cluster: ST13v1/ ST13v6/ST2011v4
CGSSp14BS292_02408 | 65 | 149094..149429 | hypothetical protein | ST13v1/ST13v6/ST13v12 |  |  | Distributed Cluster: ST13v12
CGSSp14BS292_02413 | 65 | 149442..149810 | hypothetical protein | ST13v1/ST13v6/ST13v12 |  |  | Distributed Cluster: ST13v12/ ST13v6/ST2011v4
CGSSp14BS292_02418 | 65 | 149797..150096 | hypothetical protein | ST13v1/ST13v6/ST13v12 |  |  | Distributed Cluster: ST13v1
CGSSp14BS292_02423 | 65 | complement(150214..151677) | Macrolide-specific ABC-type efflux carrier | ST13v1/ST13v6/ST13v12
CGSSp14BS292_02428 | 65 | complement(151698..152915) | Macrolide-efflux protein | ST13v1/ST13v6/ST13v12
CGSSp14BS292_02433 | 65 | [NAME]..153471) | hypothetical protein | ST13v1/ST13v6/ST13v12
CGSSp14BS292_02443 | 65 | complement(154542..154805) | integral membrane protein | ST13v1/ST13v6/ST13v12
CGSSp14BS292_03333 | 65 | 291160..294363 | Hyaluronate lyase precursor | ST13v1/ST13v6/ST13v12
CGSSp14BS292_03338 | 65 | 294899..295132 | transposase of IS200 family protein | ST13v1/ST13v6/ST13v12
CGSSp14BS292_03343 | 65 | [NAME]..296136) | keto-hydroxyglutarate-aldolase/keto-deoxy- | ST13v1/ST13v6/ST13v12
CGSSp14BS292_03348 | 65 | complement(296146..297147) | 2-keto-3-deoxygluconate kinase | ST13v1/ST13v6/ST13v12
CGSSp14BS292_03353 | 65 | complement(297178..297819) | ribose 5-phosphate isomerase RpiB | ST13v1/ST13v6/ST13v12
CGSSp14BS292_03358 | 65 | complement(297838..298653) | gluconate 5-dehydrogenase (5-keto-D-gluconate | ST13v1/ST13v6/ST13v12
CGSSp14BS292_03363 | 65 | 298925..299359 | phosphotransferase system sugar-specific EII | ST13v1/ST13v6/ST13v12
CGSSp14BS292_03368 | 65 | 299371..300561 | glucuronyl hydrolase | ST13v1/ST13v6/ST13v12
CGSSp14BS292_03373 | 65 | 300572..301063 | N-acetylgalactosamine-specific | ST13v1/ST13v6/ST13v12
CGSSp14BS292_03378 | 65 | 301078..301857 | phosphotransferase system sugar-specific EII | ST13v1/ST13v6/ST13v12
CGSSp14BS292_03383 | 65 | 301844..302662 | PTS system, IID component | ST13v1/ST13v6/ST13v12
CGSSp14BS292_03388 | 65 | 302662..302955 | preprotein translocase, YajC subunit | ST13v1/ST13v6/ST13v12
CGSSp14BS292_03393 | 65 | 302977..304878 | oligohyaluronate lyase | ST13v1/ST13v6/ST13v12
CGSSp14BS292_03398 | 65 | 304938..305939 | sugar binding transcriptional regulator RegR | ST13v1/ST13v6/ST13v12
CGSSp14BS292_03403 | 65 | complement(306049..306384) | hypothetical protein | ST13v1/ST13v6/ST13v12
CGSSp14BS292_03448 | 65 | 312228..312416 | hypothetical protein | ST13v1/ST13v6/ST13v12
CGSSp14BS292_03493 | 65 | 320543..321988 | integral membrane regulatory protein Cps2A | ST13v1
CGSSp14BS292_03508 | 65 | 322729..323421 | capsular polysaccharide biosynthesis protein | ST13v1
CGSSp14BS292_03513 | 65 | 323431..324114 | capsular polysaccharide biosynthesis protein | ST13v1
CGSSp14BS292_03518 | 65 | 324130..325497 | undecaprenylphosphate glucosephosphotransferase | ST13v1
CGSSp14BS292_03523 | 65 | 325501..325950 | exopolysaccharide biosynthesis protein, | ST13v1
CGSSp14BS292_03528 | 65 | 325950..326453 | exopolysaccharide biosynthesis protein, | ST13v1
CGSSp14BS292_03533 | 65 | 326443..327615 | capsular polysaccharide repeating-unit | ST13v1
CGSSp14BS292_03538 | 65 | 327612..328631 | predicted glycosyltransferase | ST13v1
CGSSp14BS292_03543 | 65 | 328646..329602 | Glycosyltransferases involved in cell wall | ST13v1
CGSSp14BS292_03548 | 65 | 329690..330538 | Putative teichoic acid/polysaccharide | ST13v1
CGSSp14BS292_03553 | 65 | 330531..331994 | polysaccharide biosynthesis protein | ST13v1
CGSSp14BS292_03558 | 65 | 331978..332310 | hypothetical protein | ST13v1
CGSSp14BS292_03563 | 65 | 332307..332624 | probable glycero-phosphotransferase | ST13v1
CGSSp14BS292_03568 | 65 | 333102..>334142 | hypothetical protein | ST13v1
CGSSp14BS292_03728 | 67 | 28439..29452 | type I restriction-modification system, S | ST13v1/ST13v6/ST13v12
CGSSp14BS292_05569 | 73 | 71183..71365 | IS1381, transposase OrfA | ST13v1/ST13v6/ST13v12
CGSSp14BS292_05624 | 73 | 84182..84406 | hypothetical protein | ST13v1/ ST13v6/ST2011v4
[NAME] | 73 | 84544..85773 | arginine deiminase | ST13v1/ ST13v6/ST2011v4
CGSSp14BS292_05634 | 73 | 85831..86847 | ornithine carbamoyltransferase | ST13v1/ ST13v6/ST2011v4
CGSSp14BS292_05639 | 73 | 87012..87959 | carbamate kinase | ST13v1/ ST13v6/ST2011v4
CGSSp14BS292_05644 | 73 | 88168..89679 | hypothetical protein | ST13v1/ ST13v6/ST2011v4
CGSSp14BS292_05649 | 73 | 89701..91032 | putative dipeptidase | ST13v1/ ST13v6/ST2011v4
[NAME] | 73 | complement(93249..94400) | NAD-dependent methanol dehydrogenase (medh) | ST13v1/ ST13v6/ST2011v4
CGSSp14BS292_05669 | 73 | complement(94546..96312) | L-fucose isomerase | ST13v1/ ST13v6/ST2011v4
CGSSp14BS292_05674 | 73 | complement(96325..97053) | L-fuculose phosphate aldolase | ST13v1/ ST13v6/ST2011v4
CGSSp14BS292_05679 | 73 | complement(97068..100085) | hypothetical protein | ST13v1/ ST13v6/ST2011v4
CGSSp14BS292_05684 | 73 | complement(100096..102312) | Alpha-galactosidase | ST13v1/ ST13v6/ST2011v4
CGSSp14BS292_05689 | 73 | complement(102334..104205) | hypothetical protein | ST13v1/ ST13v6/ST2011v4
CGSSp14BS292_05694 | 73 | complement(104211..105530) | probable glycosyl hydrolase | ST13v1/ ST13v6/ST2011v4
CGSSp14BS292_05699 | 73 | complement(105527..106372) | binding-protein-dependent transport systems | ST13v1/ ST13v6/ST2011v4
CGSSp14BS292_05704 | 73 | [NAME]..107298) | putative ABC-type sugar transport system, | ST13v1/ ST13v6/ST2011v4
CGSSp14BS292_05709 | 73 | complement(107385..108677) | putative extracellular solute-binding | ST13v1/ ST13v6/ST2011v4
CGSSp14BS292_05714 | 73 | [NAME]..110109) | rhamnulokinase (Rhamnulose kinase) | ST13v1/ ST13v6/ST2011v4
CGSSp14BS292_05719 | 73 | 110285..111058 | regulator of fucose operon | ST13v1/ ST13v6/ST2011v4
CGSSp14BS292_05784 | 73 | complement(120602..121507) | permease of the major facilitator superfamily | ST13v1/ ST13v6/ST2011v4
CGSSp14BS292_05804 | 73 | complement(124271..124468) | hypothetical protein | ST13v1/ ST13v6/ST2011v4
CGSSp14BS292_05809 | 73 | 124549..125208 | hypothetical protein | ST13v1/ ST13v6/ST2011v4
CGSSp14BS292_05814 | 73 | complement(125295..125498) | Hypothetical protein, truncation | ST13v1/ ST13v6/ST2011v4
CGSSp14BS292_06739 | 102 | 3067..8370 | cell wall surface anchor family protein | ST13v1
CGSSp14BS292_08265 | 125 | 88237..88515 | hypothetical protein | ST13v1/ST13v6/ST13v12
CGSSp14BS292_08270 | 125 | 88500..88697 | hypothetical protein | ST13v1/ST13v6/ST13v12
CGSSp14BS292_08290 | 125 | 97310..98785 | PTS system, IIC component, putative | ST13v1/ST13v6/ST13v12
CGSSp14BS292_08295 | 125 | 99052..99396 | beta-galactosidase precursor, putative | ST13v1/ST13v6/ST13v12
CGSSp14BS292_08300 | 125 | 99487..105753 | beta-galactosidase precursor, putative | ST13v1/ST13v6/ST13v12
CGSSp14BS292_08310 | 125 | complement(106612..106857) | hypothetical protein | ST13v1/ST13v6/ST13v12
CGSSp14BS292_08335 | 125 | 109010..109159 | hypothetical protein | ST13v1/ST13v6/ST13v12
CGSSp14BS292_08755 | 125 | complement(182621..182830) | hypothetical protein | ST13v1/ST13v6/ST13v12
CGSSp14BS292_11557 | 154 | complement(8667..9488) | ABC transporter, permease protein | ST13v1
CGSSp14BS292_11562 | 154 | complement(9505..9618) | hypothetical protein | ST13v1
CGSSp14BS292_11567 | 154 | complement(9630..9974) | hypothetical protein | ST13v1
CGSSpBS293_00105 | 17 | complement(12692..>14036) | hypothetical protein | ST13v12/ ST13v6/ST2011v4
CGSSpBS293_00462 | 28 | complement(<1..2203) | Possible cell surface protein | ST13v12/ ST13v6/ST2011v4
CGSSpBS293_03728 | 98 | <1..>2863 | hypothetical protein | ST13v12/ ST13v6/ST2011v4
CGSSpBS293_07401 | 168 | 83082..85040 | ABC-type oligopeptide transport system, | ST13v12/ ST13v6/ST2011v4
CGSSpBS293_07406 | 168 | 85372..86472 | UDP-galactopyranose mutase | ST13v12/ ST13v6/ST2011v4
CGSSpBS293_08474 | 170 | complement(68993..70798) | choline binding protein PcpA | ST13v1/ST13v6/ST13v12
CGSSpBS293_08544 | 170 | complement(83736..87524) | beta-galactosidase | ST13v12
CGSSpBS293_08569 | 170 | 95016..96182 | hypothetical protein | ST13v12
CGSSpBS455_02077 | 25 | 859..1221 | hypothetical protein | ST2011v4
CGSSpBS455_02082 | 25 | 1414..1725 | hypothetical protein | ST2011v4
CGSSpBS455_02087 | 25 | complement(1878..3161) | hypothetical protein | ST2011v4
CGSSpBS455_02092 | 25 | complement(3240..3560) | phage integrase family site specific | ST2011v4
CGSSpBS455_04858 | 34 | complement(44496..44750) | hypothetical protein | ST2011v4
CGSSpBS455_04883 | 34 | complement(46922..47230) | hypothetical protein | ST2011v4
CGSSpBS455_05160 | 38 | complement(<1..284) | N-acetylmannosamine-6-phosphate 2-epimerase | ST2011v4
CGSSpBS455_05165 | 39 | <1..>271 | GTP pyrophosphokinase | ST2011v4
CGSSpBS455_05170 | 40 | complement(<1..140) | phosphoenolpyruvate carboxylase | ST2011v4
CGSSpBS455_05175 | 41 | <1..>447 | gamma-glutamyl phosphate reductase | ST2011v4
CGSSpBS455_05180 | 42 | <1..177 | IS605/IS200 family transposase | ST2011v4
CGSSpBS455_05185 | 42 | 197..379 | transposase IS200-family protein | ST2011v4
CGSSpBS455_05190 | 42 | 264..464 | IS200 family transposase | ST2011v4
CGSSpBS455_05195 | 43 | complement(<1..371) | SmpA/OmlA domain-containing protein | ST2011v4
CGSSpBS455_05200 | 45 | <1..129 | D-tyrosyl-tRNA(Tyr) deacylase | ST2011v4
CGSSpBS455_05205 | 46 | complement(<1..343) | cobalt transport protein CbiM | ST2011v4
CGSSpBS455_05210 | 48 | complement(<1..320) | formate hydrogenlyase, subunit G | ST2011v4
CGSSpBS455_05215 | 49 | 1..144 | hypothetical protein | ST2011v4
CGSSpBS455_05220 | 49 | complement(129..>376) | hypothetical protein | ST2011v4
CGSSpBS455_05225 | 50 | <1..139 | protective surface antigen D15 | ST2011v4
CGSSpBS455_05741 | 55 | complement(7052..7309) | hypothetical protein | ST2011v4
CGSSpBS455_06546 | 60 | complement(71446..72123) | hypothetical protein | ST2011v4
CGSSpBS455_06561 | 60 | 73692..74792 | riboflavin biosynthesis protein RibD | ST2011v4
[NAME] | 60 | 74777..75412 | riboflavin synthase subunit alpha | ST2011v4
CGSSpBS455_06571 | 60 | 75402..76637 | 3,4-dihydroxy-2-butanone 4-phosphate | ST2011v4
CGSSpBS455_06576 | 60 | 76638..77105 | riboflavin synthase subunit beta | ST2011v4
CGSSpBS455_06991 | 62 | complement(30305..30883) | hypothetical protein | ST2011v4
CGSSpBS455_06996 | 62 | complement(30896..31237) | hypothetical protein | ST2011v4
CGSSpBS455_09122 | 94 | complement(<1..1310) | hypothetical protein | ST2011v4
CGSSpBS455_09127 | 94 | complement(1315..1665) | hypothetical protein | ST2011v4
CGSSpBS455_09132 | 94 | complement(1674..5282) | hypothetical protein | ST2011v4
CGSSpBS455_09137 | 94 | complement(5269..5619) | hypothetical protein | ST2011v4
CGSSpBS455_09142 | 94 | complement(5658..6038) | hypothetical protein | ST2011v4
[NAME] | 94 | complement(6043..6456) | Lj965 prophage major tail protein | ST2011v4
CGSSpBS455_09152 | 94 | complement(6459..6827) | hypothetical protein | ST2011v4
CGSSpBS455_09157 | 94 | complement(6824..7339) | hypothetical protein | ST2011v4
CGSSpBS455_09162 | 94 | complement(7314..7652) | hypothetical protein | ST2011v4
CGSSpBS455_09167 | 94 | complement(7633..7944) | hypothetical protein | ST2011v4
CGSSpBS455_09172 | 94 | complement(7946..8134) | hypothetical protein | ST2011v4
CGSSpBS455_09177 | 94 | complement(8124..8306) | hypothetical protein | ST2011v4
[NAME] | 94 | complement(8318..9163) | major head protein | ST2011v4
CGSSpBS455_09187 | 94 | complement(9170..9334) | hypothetical protein | ST2011v4
CGSSpBS455_09192 | 94 | complement(9344..9754) | phage scaffold protein | ST2011v4
CGSSpBS455_09197 | 94 | complement(9971..10222) | hypothetical protein | ST2011v4
CGSSpBS455_09202 | 94 | complement(10224..10469) | hypothetical protein | ST2011v4
CGSSpBS455_09207 | 94 | complement(10512..10925) | hypothetical protein | ST2011v4
CGSSpBS455_09212 | 94 | complement(10922..11131) | hypothetical protein | ST2011v4
CGSSpBS455_09217 | 94 | complement(11133..12716) | SPP1 family phage head morphogenesis protein | ST2011v4
CGSSpBS455_09222 | 94 | complement(12679..14148) | hypothetical protein | ST2011v4
CGSSpBS455_09227 | 94 | complement(14160..15458) | terminase large subunit | ST2011v4
[NAME] | 94 | complement(15436..15936) | phage terminase small subunit | ST2011v4
CGSSpBS455_09237 | 94 | complement(16344..16748) | hypothetical protein | ST2011v4
CGSSpBS455_09242 | 94 | complement(16821..17192) | hypothetical protein | ST2011v4
CGSSpBS455_09247 | 94 | complement(17192..17509) | hypothetical protein | ST2011v4
CGSSpBS455_09252 | 94 | complement(17506..17925) | hypothetical protein | ST2011v4
CGSSpBS455_09257 | 94 | complement(17944..18393) | hypothetical protein | ST2011v4
CGSSpBS455_09262 | 94 | complement(18396..18506) | hypothetical protein | ST2011v4
CGSSpBS455_09267 | 94 | complement(18506..19177) | hypothetical protein | ST2011v4
CGSSpBS455_09277 | 94 | complement(19541..19963) | bacteriophage protein | ST2011v4
CGSSpBS455_09282 | 94 | complement(20007..20435) | phage protein | ST2011v4
CGSSpBS455_09287 | 94 | complement(20432..20761) | phage protein | ST2011v4
CGSSpBS455_09292 | 94 | complement(20775..20984) | hypothetical protein | ST2011v4
CGSSpBS455_09297 | 94 | complement(20950..21456) | hypothetical protein | ST2011v4
CGSSpBS455_09302 | 94 | complement(21466..21882) | putative single strand binding protein | ST2011v4
CGSSpBS455_09312 | 94 | complement(21977..22312) | hypothetical protein | ST2011v4
CGSSpBS455_09317 | 94 | complement(22305..22793) | hypothetical protein | ST2011v4
CGSSpBS455_09322 | 94 | complement(22796..23836) | hypothetical protein | ST2011v4
CGSSpBS455_09327 | 94 | complement(23846..24610) | phage protein RecT family | ST2011v4
CGSSpBS455_09332 | 94 | complement(24622..24852) | hypothetical protein | ST2011v4
CGSSpBS455_09337 | 94 | [NAME]..24979) | hypothetical protein | ST2011v4
CGSSpBS455_09342 | 94 | complement(24972..25115) | hypothetical protein | ST2011v4
CGSSpBS455_09347 | 94 | complement(25102..25362) | hypothetical protein | ST2011v4
CGSSpBS455_09352 | 94 | complement(25355..25561) | hypothetical protein | ST2011v4
CGSSpBS455_09357 | 94 | complement(25561..25722) | hypothetical protein | ST2011v4
CGSSpBS455_09362 | 94 | complement(25940..26794) | putative phage DNA replication protein | ST2011v4
CGSSpBS455_09367 | 94 | complement(26804..27472) | hypothetical protein | ST2011v4
CGSSpBS455_09372 | 94 | complement(27445..27699) | hypothetical protein | ST2011v4
CGSSpBS455_09377 | 94 | [NAME]..27923) | Cro/CI family phage transcriptional regulator | ST2011v4
CGSSpBS455_09382 | 94 | complement(28114..28404) | hypothetical protein | ST2011v4
CGSSpBS455_09387 | 94 | complement(28401..28547) | hypothetical protein | ST2011v4
CGSSpBS455_09392 | 94 | 28718..28813 | hypothetical protein | ST2011v4
CGSSpBS455_09397 | 94 | complement(28942..29064) | hypothetical protein | ST2011v4
CGSSpBS455_09402 | 94 | [NAME]..29413) | hypothetical protein | ST2011v4
CGSSpBS455_09407 | 94 | 29587..30393 | hypothetical protein | ST2011v4
CGSSpBS455_09412 | 94 | 30395..31159 | phage protein | ST2011v4
CGSSpBS455_09417 | 94 | 31438..32883 | site-specific recombinase | ST2011v4
CGSSpBS455_10144 | 103 | 63917..64339 | MutT/nudix family protein | ST2011v4
CGSSpBS455_10149 | 103 | complement(64359..65108) | transcriptional regulator, MerR family protein | ST2011v4
CGSSpBS455_10154 | 103 | 65213..65434 | hypothetical protein | ST2011v4