Spreadsheet: 118cd365-8406-468a-9dad-5f8484d9efa6
Sheet: ssRNA

>gi|9634678|ref|NP_038458.1| capsid protein (p38) [Japanese iris necrotic ring virus]
MALRDEKKVAKLASDGVAWAVKLRSGGGWKTLTTTQKRMARQALGMTQVPIAQTGLRVNRVSQPISVSSRITTGEPRVTN
VKRSMTVTFSEMIGVVRSHSSLSTESWVLNPSDIATFPQLSVSAAMYEKYRFTNLAFRFAPSCPTTTGGVVVLVHDPDSS
DDLPSDPTMLYEYSGAMRTSAYSPARLIVPTDGAARFVGDNHTSDPKLINFGKLIVANYGQGASDPDMLGEIFIEYTVVL
IDRQPSALSTQTLSAESSTGPKLLSRLVEGTKSPYTLTYSFNCGGTFVVSLFYPIGPVSGPVSGSATIIRAYGDAQSQQA
QVITVRSPCRGGDFTLGLNSPGDIPTAFVTRA
>gi|66090971|ref|YP_233104.1| coat protein [Cassia yellow blotch virus]
MSQTGTGKSTRAQRRKIAREARKALKLSNPRPVVLEPVSSGIGRPLRARQGCVISAWSSSNSACDAKTTSQISITLPTEL
SSERGKLLKVNRVMLWMGLLPSVSGTVKSCVTPTQSTPAAAFQSALAVADSSKDVGVAFYAEAFKGLTLEQLTNDLSIYL
YSAEALSAGDVVVHLEVEHDEPVLNRFFTGLL
>gi|115350055|ref|YP_762620.1| coat protein [Streptocarpus flower break virus]
[NAME]
STAEVLNATQRVDDSTTAIRGALQRLSDELNRGSGYMNRTSFETILLWSAATAK
>gi|119964533|ref|YP_950424.1| 18 [NAME] coat protein [[NAME] mosaic virus]
MPYQPITIKQLPWVSANWADYQTLVNVLRNTSATSFQTQAGRDSIRSQLTGCVDSAVQVNVRFPERFLVFINDPAIADVW
FALLKATDTKNRIIEVDTERSPSNSEIESVTRRVDDASVAIRINVERLLKALNDVQGVYDRTLFEQVSGLTWVEAGQVAS
ASK
>gi|145651768|ref|YP_001165305.1| coat protein [Phlox virus S]
MAPPKPDPTLENSVTGEQKQPIQLPTPRPTVDVDAVAEEVLGDVDRDLQHLVKLEELMRKKQRGVVVTNAGFETGRPPLK
PSAEMRVDPTNIYSRPSTDFLWNVKPQFVSNNMATAEDMVGIKARLEGLGVPSESVTSVLLQLAIECAHTSSSSYQNPSG
VFTWDGGAIMKDDVLGVVQEIAGLRRFCRLYAAITWNYMHIHKTPPADWSAMGFAFNTRYAAFDCFDYVENGAAIRPQGG
[NAME]
>gi|70980517|ref|YP_263307.1| coat protein [Lily virus X]
MTTFVPDAKTWADTAYTAQSESVATAEELQSIATLWEGIGIPAANFFDVAFQLAMRCSDGHASSLTVLSGNCTVAPTVTL
KAAAGLVKAVLPLRQFCRYYAKFVWNWRLSHDLPPANWADSQFPAEARFAAFDFFDGVTNSAAPQPPDGLIRPPTELELS
AAQTAKFAALARVRGSGFVTTAAEITHGRAEVSRTMLLSPP
>gi|62326909|ref|YP_224088.1| coat protein [Hydrangea ringspot virus]
MTTTTTTNPIPPQAGTSTPSAAFAPLSQEVLETLSFPVTSNLVPSPTELAAIADAWTTLGVPAAETTKHALALVNFCFDS
GSSATTRFTGASPTPTIPLSALAGAVLELVPIRKFCRYFAQYIWNARLTANAPPASWEAWNFPENEKFAGFDFFDGVLNT
ASLKPPQGLVRKPTEAERVANATAKSLHLFEAATQRSNLASTATQFTRGRLTDTSPTIQFLPAPE
>gi|94971814|ref|YP_595731.1| coat protein [[NAME] virus S]
[NAME]
ERGNISVTNASFERGRPALTPTPDMRGDPSNPYSRPSTDLLWSIKPKPRSDNMATSEDIMRISTQLEGLGVPTEHVSKVI
LQAVFYCADKSSSSYQDPQGTFEFPGGAIMVDDVVGTINSICTLRKVCRLYAAVVWNYMHIHDKPPADWRAMGFNYNTRY
AAFDFFDYVENEAAIKPAGGIVPRPTDAEYIAFHTYKQLALDRANNNATYANLDVAVTGGRTGPLIERNLNNANNRKQ
>gi|56692635|ref|YP_164805.1| coat protein [Fragaria chiloensis latent virus]
MAFCNVCGKQMPCGVVHRRGRPTQRSQNFARRGGMAPRPNTANNLAMPTAVRTEWEINGPNTQVRRFPGLVTVSKGVAIR
STGAGTYWGFAISTAFHNLMGQRVLCDALVMRFISDHSGGVVGVVRGYNPDHPTAPNALTRRRFHKGVATGLQFLAPTNQ
VVDEIADDIYIVFQFDTAFTANAVLLTRDRYLQHNAVPRVEIPADVLRTEALPVEDIRG
>gi|75750464|ref|YP_319831.1| coat protein [Alstroemeria virus x]
MAGENTPPTPPTAPAGSAADLANPNRSPTVSDLAKLNYQSTTTSVATPEEITALGVLFTSAGVDPNSVPLAMWDLARAYA
DVQSSRSAMLVGSTPSNKSITRQTLARKLDQVNITPRQFCMYFAKVVWNILISSNTAPAGWAKLGYPEECKFAAFDFFDG
VLSPAALDPADGLIRQPNTREIQAHSTAKFGALARQRISNGNFVSTLAEVTHGRVGGVNAMYSIEAPPEA
>gi|83999993|ref|YP_446996.1| coat protein [Nerine virus X]
MANTSASAALPAQSKTDDMTAPPDNKDLEALQYIPESNAVATADQIHAIAALWKSIGVPAAKLGPYAWDLARHCADVQSS
SQAKIVGTPPGESKLTRQMLAASIKSICTLRQFCMYFAPVVWNMMILTDQPPANWSKLNYRESERFAAFDFFDGVTHTAA
LHPIGGLIRPPSEAERVANAAQKGLHIYKAAQQKNQLTSTAVEFTRAQVGSAPSLTLLPPN
>gi|113882965|ref|YP_729209.1| nucleocapsid protein [[NAME] coronavirus (BtCoV/133/2005)]
MATPAAPRTISFADNNDNQPNQQQRGRGRNPKPRPAPNNTVSWYTGLTQHGKNPLAFPPGQGVPLNANSTTAQNAGYWRR
QDRKINTGNGVKQLAPRWFFYYTGTGPEANLPFRSVKDGIVWVYEEGATDAPSVFGTRNPANDAAIVCQFAPGTLIPKNF
HIEGTGGNSQSSSRASSNSRNSSRSNSRGGRSTSNSRGTSPVSHGVGSAESLAALPLLLDLQKRLADLESGKSKQPKVVT
KKDAAAAKNKMRHKRVATKGFNVTQAFGLRGPGPLQGNFGDMNYNKFGTEDPRWPQMAELAPSASAFMSMSQFKLTHQSN
[NAME]
VAGSITMRSGSSPALQDVTFDSEA
>gi|116734784|ref|YP_842442.1| coat protein [[NAME] symptomless virus]
MSTIEKTASPSGSDEERENTRKALEERLKKRTEEANKEFTGNNSDDELEERFRKLKEYLLKNMRSKQIGNIGLEIGRPAL
KPMDEIRPDLTNIFTMPTIDILIKKGWRPSSTAVATAQQLIEISAKLQGLGVPPESIAPIVWDTAMYCANAGSSDKMDPQ
GTVEFPGGAITRDSVVATIKEYTTLRAFCRAYAPIVWNYMIGTNQPPANWQAKGFSEQTKFAAFDTFDYIRNPAAIKPLE
GLIRSPTNEEMIANATHRQLAIDRNSRNDRFSNNSLEVTGGLYGCKTKRTLRNLTCD
>gi|151266416|ref|YP_001333653.1| coat protein [Bell pepper mottle tobamovirus]
MSYTVNSPSQLVYLSSAWADPTDLLNLCTNSLGNQFQTQQARTTVQQQFSDVWKPTPQAGVRFPASGFKVYRYNAVLDPL
ITALLGTFDTRNRIIEVENQQNPTTAETLDATRRVDDATVAIRSAINNLANELVRGTGMYNQTSFESMAGLTWTTTPPSG
>gi|22550327|ref|NP_689404.1| major coat protein [[NAME] potato chlorotic stunt virus]
MDTGKVNDDKNFDSDSDVGFGDRNENDNLRRRSDTIDNENVNNVGRRDMELTSGILTSEQLALARLGKIQVYSNSPDIMS
KSQEDEFKRHMESFVRQISGETTLSPEIFAGFYASLFQAWANQSTSEKNASNANLENVFMVNGKEYSWRTHSFINHMQSN
MPDVKNAARKWARAHANDYKVLVGLGIVKPDYHLQAKQGVLPEYWHLATDFMRGNDMATTADGLAATLMMMKRNALCNKD
NKNSIYNVTQLTGTGLHC
>gi|160700647|ref|YP_001552321.1| coat protein [Phlox Virus B]
MAPPEDNKGKQKLDDIASASGQHPPEKKDESEFQKGSDDESSSSSAREDRQNAKRLSTLAKLLRQERTALKVTNMGLERG
[NAME]
QDPKGTFEWPGGAIISDDVVGVINELSTLRKVCRLYAPVAWNYMHIHDEPPSDWAAMGFHYTTRFAAFDFFDYVQNGAAI
KPLGGIVPMPTRAEYVAYNTYKQLAIDRANNNDTYANLDSAVTGGRMGPEIQRNMNFANNKRQY
>gi|23578033|ref|NP_702992.1| coat protein [Tulip virus X]
MALNTAPNPEALAAMTLEVSSPAVPTPAELDTIAAGLTTLGVPADSLISHALALVNACFDAGSSQFTTISGPSPTPTITL
AQLAGVVKVSTTLRKFCRFYAKLIWNARLSRNRPPAGFARAYVKTGQKWAGFDFFDGLLNPAALEPLGGLTREPTPDEIT
ANETARSLGLFESRANSNNLATTSTQFTRGQLSNTSPTVQFLPSPED
>gi|160707865|ref|YP_001552328.1| major capsid protein [[NAME] bark necrosis stem pitting-associated virus]
MATADRQSMPATTPIDEWTNTEFPGATFLKRKVANDLELDKLLTNKSITEDQRRIYAEARVKRSRLTLLNEAEKEAVRQV
EAARTLPGLPATPSGVKNVVATMKSFMNNPSETAMFDWTKMKIPKMVDVRTPGVVTTEHSIEVYDALRLWALSKGLQDTD
[NAME]
SAGFLQPNIKKLNENGIPPQYYPFGGDFLVVDSRVFGYSAALASQLGRMVALNRKRNGNKEIHNLYEQTTAAPQIFTGGN
QSGGR
>gi|156616265|ref|YP_001430025.1| coat protein [Coleus vein necrosis virus]
MSGKQAPSPSDEEKRKAEEDARARAAEAERQNRAPPERGGSSEANAVNDVDLSQMENQVEEAKRLLQRFHNLVKFETSNL
NAGTLKNGGFEKGRPKAVLSDALKGDTSDVFTRPSLDALHAMNFKSEALDIITAQEQATIMAKLVGLGVPPQSAAPLCWS
IARYCADTSSSAFADPKGTFEFQGGAIMRDAVYAVIREVSTLRAFCRAFAPITWNAMITAGKPPANWAAKGYTEETKYAA
FDVFEYVTNPAAIQPLEGLLRRPTLTEMIAHETNKRLALDRNRRNARFASTSSLVTGGMLGKDIKTSFNGSNNSD
>gi|167600363|ref|YP_001672005.1| nucleocapsid protein [[NAME] coronavirus]
MSFTPGKQSSSRASSGNRAGNGILKWADQSDQSSNFQTRGRRAQPKQTATSQPAGGNVVPYYSWFSGITQFQKGKEFQFA
EGQGVPIAPGIPATEAKGYWYRHNRRSFKTADGNQRQLLPRWYFYYLGTGPHAKAQYGTNIDGVFWVANKQADVNTPADV
VDRDPSSDEAIPTRFPPGTVLPQGYYIEGSGRSVPNSRSTSRASSRASSAGSRNRSNSGTRTPTSGVTSDMADQIASLVL
AKLGKDATKPQQVTKQTAKEVRQKILNKPRQKRSPNKQCTVQQCFGKRGPNQNFGGAEMLKLGTSDPQFPILAELAPTAG
AFFFGSRLELAKVQNLSGNFDEPQKDVYELRYNGAIRFDSTLPGFETIMKVLNENLNAYQQQDDGTNMSPKPQRQRGQQK
GGENEDVSVAAPKSRVQQNKSRELTAEDISLLKQMDDPLTEDNSEM
>gi|148724440|ref|YP_001285473.1| coat protein [Okra mosaic virus]
MTSDRIVAPQLALNTKSSTLPLEPGVTPPTISYPFQIQVAALGTKPYSDAISIASNATVASYTSLYRHAILHSLKATIHP
TARAPAYPCDVSIAWVPANSSATPAQVLSVYGGQMFCIGGAINSTQPIDFPCNLTQVNPTIKDSVTFTDTPKLIVNSTVG
ASPPTVPTCHLTITGIVTLHSPLLQASA
>gi|169303561|ref|YP_001715616.1| coat protein [Asparagus virus 3]
MANTTKDSTSTKAPEPVPVDLSDPTRAPSLKDLQAIKYVSTTTAVATPDEIKLLGDLFKKLGVDGASVGPAMWDLARAYA
DVQSSRSATLSGTTPSNPAITRQALARQFYVINITPRQFCMYFAKVVWNMMIDSNVPPAGWVKHGLPEDCKFAGFDFFEG
VLSPSSLDPADGLIRQPSQREVQAHSTAKYGALARQRIQNGNFVSNLAEVTRGRAGGVNSMYAIEAPPEL
>gi|169822565|ref|YP_001718616.1| nucleocapsid protein [[NAME] bat coronavirus HKU8]
MASVSFSDEPRGRSGRVPLSLFAPLRTTDGSLFFRAMPQNGVPKGFGNKDQQVGYWNEQVRWRMKRGQRQNLPSNWHFYY
HGTGPHADAKFREKIQGVFWVAKQGSKVAPTDLPTRKRNQPTIEPQFDFDLPKNIEIVTAPSQPNSRSNSRSQSSGGSKS
RANSQSRDNSDQQKTPKGSTNNSGSNSQERSQKSKKGKGSTDQDDLVNAVRQALMGLGFQPQGNSGKNGGKKSAPSSGKS
TPKDSRSKSPARPQSTKKQLDKPEWKRVPNKSESVTACFGPRDVSRNFGTKGLVAEGVEYSHFPQIAELLPTQAALAFGS
RVEVKDFKDEVEIKFHYKMNVPKENKNLQVFLDQVDAYLDPSREEKPKEQRKSKEKKKEEAPAQLNPAAPVFTPPVVLPD
AVANVEFDMVDEVIDADHESFA
>gi|169822557|ref|YP_001718609.1| nucleocapsid protein [[NAME] coronavirus 1A]
MASVQFEDTNSRGRSGRIPLSYYAPLRVADDKLFLKSMPGNGVPKGMGGKAEQIGYWTEQRRWRMNKGQRKDLPSNWHFY
YLGTGPHADLKFRERQVGVFWVAKQGSKTEPTNLGTRNRNQQLRIPEFDFTLPDSLEVVNSDSRPASRSDSRSQSKSNNQ
SRSNSKARDQSGTRTPKNASQNQKPKKNQQEDLVAAVREALKGLGIQQSRSSSGKSTPARSKSPARPSNKKQLDKPEWKR
[NAME]
LPYFLQQVNAYLDPNSDQPIPKKPKAKSEEVPQLNPAAPVFTPPAQEPAVELEMVDEVFDIDPLGDSVA
>gi|169822549|ref|YP_001718602.1| nucleocapsid protein [[NAME] coronavirus 1B]
MASVQFEDTNSRGRSGRTPLSYYAPLRVADDKLFLKSMPGNGVPKGMGEKSEQIGYWTEQRRWRMNKGQRKDLPSNWHFY
YLGTGPHADLKFRERQVGVFWVAKQGSKTEPTKLGTRNRNQQLRIPTFDFTLPDSLEIVNSDSRPASRSNSRSQSKSANQ
SRSNSQVREQSGNRTPKNASQKKNQQEDLVAAVREALKGLGFQQSRSSSGRSTPSRAKSPARQSKKQLDKPEWKRVPNRT
ENATTCFGQRSVEKNCGSASVLAMGVETPNFPRIAELIPTQAALFFGSRVSTKENSDTVEIKYHYKMSVPKTNPNLPYFL
QQVNAYLDPNSDQPIPKKQKAKTEETPQLNPTAPAFTHPAVPDVELEMVDEVFDIDPLGDSVA
>gi|10645645|ref|NP_066394.1| coat protein [Sesbania mosaic virus]
MAKRLSKQQLAKAIANTLETPPQPKAGRRRNRRRQRSAVQQLQPTQAGISMAPSAQGAMVRIRNPAVSSSRGGITVLTHS
ELSAEIGVTDSIVVSSELVMPYTVGTWLRGVAANWSKYSWLSVRYTYIPSCPSSTAGSIHMGFQYDMADTVPVSVNQLSN
LRGYVSGQVWSGSAGLCFINGTRCSDTSTAISTTLDVSKLGKKWYPYKTSADYATAVGVDVNIATPLVPARLVIALLDGS
SSTAVAAGRIYCTYTIQMIEPTASALNN
>gi|189418881|ref|YP_001949873.1| coat protein [Melon aphid-borne yellows virus]
MNTVAARNQNGMGRRRRNRRRTSKSNRVVVVQTTGQPQRGRRRRRNPRRSPRGGRAGGRPGETFVFSKDNLTGSSSGAIT
FGPSLSESPAFSSGILKAYHEYKISMVKLEFISEASSTSSGSISYELDPHCKLNALQSTVNKFGITKSGSRTWSAKLING
LEWHDATEDQFRILYKGNGSSSTAGSFRITIKCQVQNPK
>gi|189418888|ref|YP_001949739.1| coat protein P3 [Rose spring dwarf-associated virus]
MSTVVVRQQARNNSRRNGQAQQAQGRSRQPNKARPVVVQVQPSRNGRRPRRRGGRRSSRRRGSRMASSRSHWEDYKFTIN
NLKASDAGVVKFGPSISQCSALKSGIFKSFHEFKITNLNVKYITHAASTTSGAFAVEVDTSCTQTTLKSYLQTVPVAKCG
QFSWPAGKIRGTGWLPTPDPDKTPVDKDNQFFLLYAGNGPSSVAGQFVITARCWFQSPRE
>gi|9634104|ref|NP_037638.1| coat protein P3 [Barley yellow dwarf virus-PAS]
MNSVGRRGPRRANQNGPRRRSRRTIRPVVVVQPNRAGPRRRNGRRSGRRGPNSIPGSTGRTEVFIFSVDNLKANSSGTIK
FGPSLSQCPALSDGILKSYHRYKITSIRVKFQSHASAATSGAIFVELDTACKQSALGSYINSFTISKTASKSFRAEAING
KEFQESTIDQFWLLYKANGTTTDTAGQFIITINVSMLTPK
>gi|9634965|ref|NP_054688.1| coat protein P3 [Cereal yellow dwarf virus - RPS]
MSTVVLRSNGNGSRRRRQRVARRRPAVRTQPVVVVTPNGPARRGRRRGPARPRRRRTPGLGGGGRGETFVFTKDSLAGNS
SGSITFGPSLSDYPAFQNGVLKAYHEYKITGCILQFVSEASSTAAGSIAYELDPHCKISSLASTNNKFTITKTGARSFPA
KMINGLEWHPSDEDQFRILYKGNGASSVAGSFKITLRVQLQNPK
>gi|169803205|ref|YP_001718503.1| coat protein [Lolium latent virus]
MSESKAETPSKSAEKGVASLSTSAPPSSTTPTAQAKQTPPPVATTARPMASRLPRTIAAEGGGTEKKQSHLAEDRIAQYL
PKQDAVDHSNLAALLQPFTEASYEREFDVKVNGIASKAELTAVAETWASRLNVPKENSAVLAQEIAIHCYHNGSSEQTDF
NLKSSQVAGLNLEAAVGVIKEILTLRQFAAYYATFVWNWGIKNEIPPANWVAKGYTDETKYAAFDTFSYVGSPLGLRITP
TRKPTNNEYMAASVNAREKIIQSRGKGMVTNSPMFSDGTTHQGIPLHPKLPLS
>gi|30248021|ref|NP_840099.1| coat protein [Beet western yellows virus]
MNTVVGRRTINGRRRPRRQARRAQRSQPVVVVQTSRTTQRRPRRRRRGNNRTRGAVSTRGASSSETFVFSKDNLAGSSSG
AITFGPSLSDCPAFSNGILKAYHEYKISMVILEFVSEASSQNSGSIAYELDPHCRLDALSSTINKFGITKPGRRAFTASY
INGTDWHDVAKDQFRILYKGNGSSSIAGSFRITMKCQFHNPK
>gi|9626674|ref|NP_040955.1| coat protein [Cucumber necrosis virus]
MALVSRNNNMRTLAKLAAPLATAGTRTIVDNKEAIWNGVKWIWGKLPKGKKGKNGNGALIAHPQAFPGAIAAPISYAYAV
KGRKPRFQTAKGSVRITHREYVSVLSGTNGEFLRNNGTGPNNDFSINPLNPFLFPWLVNIAANFDQYKFNSLRFEYVPLV
NTTTNGRVALYFDKDSEDPGPDDRAALANYAHLSEISPWAITKLTVPTDNVKRFISDTSSGDPKLINLGQFGWVAYSGPT
AELGDIFVEYTVDLFEAQPTSPLLESLFRESASSVQTRMGLPYFSLEVASATDLVWQARVPGTYVVTIIFNSTVGGLTPS
ISGGGTINSSFSVSTAGSSAYVANITIRVNANLSLSGLTGATNAQLFAVRAITENAVQVV
>gi|20087027|ref|NP_613262.1| coat protein [Cymbidium ringspot virus]
MAMTTTNNNRAMTRAAKQALPALGALATSGMGQQLFMSGVNYAIEKGKQFVPNRRGGKKNRNTDMVAHPGALSGSMAAPV
AISRIVRGSKPRFIRSKGSVTITHRELVGQFNSSSALVVNGGITGNLYKINPANAVLFPWLQTLASNFDQYMFNTLRLQY
VPMCASTETGRVAIYFDKDSQDLEPVDRIELANMRHLTETAPWCEGSLRVPVDSVKRFMNDNSTVDPKLIDLGQVGLATY
GGPGTNAVGDLFIHYTVTFYEPQPSSGLTSTLQTGTGSANAGPTLVAVATTATTTTVTFRSPGTYLVSMVQRATTFTGVT
PIALTFNSNTNTTAAGTNYSANYNVTVPVPGAQMRFVGTGFGNYTLQVTRAKITNAATLL
>gi|9627013|ref|NP_041258.1| coat protein [Ononis yellow [NAME]]
MEDSQPIKVRQPSISAPGTHLSPNPGQQSPSMVVPFQVSVSDLGVSEVSAQITLSSDPTLAQLTSIYRMASIVECEAVLF
PNSTSSKNPVHCDLIWVPSNSSASPKTILQTYGGNRFTVGGPITSNQIISFPLRLDSVNPIIKDSVLYLDSPRLLAFSPA
PPETQSIPSASLLIRGKLRLSSILVQPLLTSS
>gi|9628595|ref|NP_043462.1| viral coat protein [Lucerne transient streak virus]
MVAKTRRANRKKKRNNNAQRRTTEPNRQLATARRVTIPAATSVVVRKSSPVIRSDRKGIQVCNTEFIRSFDLNASFTVGS
LPCTPGTMPWLSRMAASWGRWKWNSLRFTYIPAAPSNTQGTVAMGFLYDSLDSLPSNLASMSSLDGFTTGAVWSGCEGSA
YLAKPSMRDIPGAISTCLDIDPDWRQKRWRYITALELAALSKPDFNIYAPARLTIAAANSSINIASVGTLYATYEVELFD
PISAELNLPTPAVVTQAKEDATKHTSNTEEEDGNAKPH
>gi|20178624|ref|NP_620037.1| capsid protein [Pepper ringspot virus]
MAMYDDEFDTKASDLTFSPWVEVENWKDVTTRLRAIKFALQADRDKIPGVLSDLKTNCPYSAFKRFPDKSLYSVLSKEAV
IAVAQIQSASGFKRRADEKNAVSGLVSVTPTQISQSASSSAATPVGLATVKPPRESDSAFQEDTFSYAKFDDASTAFHKA
LAYLEGLSLRPTYRRKFEKDMNVKWGGSGSAPSGAPAGGSSGSAPPTSGSSGSGAAPTPPPNP
>gi|20522101|ref|NP_620652.1| coat protein [Shallot virus X]
[NAME]
VESNSVAPKATIREILDTLQAKRQNATPKDLFSLAWACYHNGSSRFVNLNTDAPCGITHADLKTLWKASATLRQFCSYYA
KSCYVSGKQQKKPPANWSRKGYPEEAKFAGFDFFNAVLSESSPAPPGGMRFKPTQAEILGHSMNAKMSIVESRQSSHMVS
TRADLLGRQQINEQPKPPMITF
>gi|9628112|ref|NP_042699.1| coat protein [Cassava common [NAME]]
MATPTSTTPTTATITQAATTPLSALSTAPTDEELSRLDLKPASNLVASADALSAIAADWASLKVPTAQLMRHALDLVNFC
FDSGSSKYTTVEGSSPTPTIPRAALAGAVRKHTTLRQFCRYYAKIIWNARVKANIPPAGYANAHIKPEQAFAGFDFFDGV
MNVAALEPSGGLVREPTPQEIIAAETARSLNLFEAQSKGNNLATNATQVTRGRLSSSEPQVQFLTGVDE
>gi|20177482|ref|NP_619757.1| coat protein [Physalis mottle virus]
MDSSEVVKVKQASIPAPGSILSQPNTEQSPAIVLPFQFEATTFGTAETAAQVSLQTADPITKLTAPYRHAQIVECKAILT
PTDLAVSNPLTVYLAWVPANSPATPTQILRVYGGQSFVLGGAISAAKTIEVPLNLDSVNRMLKDSVTYTDTPKLLAYSRA
PTNPSKIPTASIQISGRIRLSKPMLIAN
>gi|20428575|ref|NP_620488.1| coat protein [Turnip yellows virus]
MNTVVGRRIINGRRRPRRQTRRAQRPQPVVVVQTSRATQRRPRRRRRGNNRTGRTVPTRGAGSSETFVFSKDNLAGSSSG
AITFGPSLSDCPAFSNGMLKAYHEYKISMVILEFVSEASSQNSGSIAYELDPHCKLNSLSSTINKFGITKPGKRAFTASY
INGTEWHDVAEDQFRILYKGNGSSSIAGSFRITIKCQFHNPK
>gi|13559822|ref|NP_112033.1| coat protein [[NAME] mild mosaic virus]
MATDEKKETMTNSSFDAFAHKLSKRLEKKEYDSSNMVTQPTLEQMAKFDFKNVCLDIATKAELEWISESWNMRLNLPKEK
NFETALEIAEVCRHNGSSSDITFRGRSRSGIEYSSLVAAIREICPLRQFCRAYANLVWEKSLAEKNPPQHWQKRGFKERV
KYAAFDFLDAVGSDAAIMPPTGISRLPTDEELNANLAAKNIAVINSARKKGNNTVQNLEVTGGRSGVKPEIMSLKLNN
>gi|20564220|ref|NP_620757.1| coat protein [Tulare apple [NAME]]
[NAME]
ISGDIAYASMRTELGKIKALHDSTKVYSVMYGFITKAGWLCRLKDDFDPSNATGPNAPNRTRVKAGKYSAKQLVFPPGTT
VAEVKSAYNFVWQFDSAPASGTANVVKVVKFYVSTTPLPGVKPPANFLVCEE
>gi|30018242|ref|NP_835249.1| coat protein duplicate [Grapevine rootstock stem lesion associated virus]
MSSGTGIAVGGSEAIETSGFVLSTRKEAVDKFFNELRNENYSSVDSSRLSDQEVKEVLEKSKESFKSELASTDEHFVYHI
IFFLIRSAIISTSDKVKYVGSHKYVVEGKTYTVQDVWVFNMIKGLTKQYKRVNGLRAFCCACEDLYLTVAPAMSERFKTK
AIGMKGLPVGKEYLGADFLSGTSKLMSDHDRAVSIVAAKNAVDRSAFTGGERKIVSLYDLGRN
>gi|30018243|ref|NP_835250.1| coat protein [Grapevine rootstock stem lesion associated virus]
MELMSDDNLSGLVITDASSLNGVDKKLLSAEVIKMLVQKGAPSQGIETVFGLLLYALAARTTSPKVQRADSDIIFQNTYG
DKTVVVTEGDLKKVLEGCAPLNRFTNKLRTFGRTFTEAYVDFCVAYKHKMPQLNAAAELGIPAEDSYLAADFLGACPKLS
ELQQSRKMFASMYALKTEGGVVNTPVSNLRQLGRREVM
>gi|22550383|ref|NP_689395.1| coat protein [Spring beauty latent virus]
MSTSGAGKTTRAQRRAAARKNRRSATKVVQPVIVESPASGIGRPTRARMGYSVTKWSVDCPAVTNAKSTTEISVKLPDDL
SSEKNKQLKVGRILIWLGLVPSISGSVKACLTEKQENPSHSFQVALAYADNSKDVAAAMYSEDFKGITLEQVSEHLKIYL
YSGDVVAAKSIVVHLEVEHVKPTFDEAFTPVF
>gi|20178352|ref|NP_619738.1| coat protein [Pea enation [NAME]
MPTRSRSKANQRRRRPRRVVVVAPSMAQPRTQSRRPRRRNKRGGGLNGSHTVDFSMVHGPFNGNATGTVKFGPSSDCQCI
KGNLAAYQKYRIVWLKVVYQSEAAATDRGCIAYHVDTSTTKKAADVVLLDTWNIRSNGSATFGREILGDQPWYESNKDQF
FFLYRGTGGTDVAGHYRISGRIQLMNASL
>gi|9627903|ref|NP_042303.1| coat protein [Southern cowpea mosaic virus]
MSGLFHHRTKPREIRAFVMATRLTKKQLAQAIQNTLPNPPRRKRRAKRRAAQVPKPTQAGVSMAPIAQGTMVKLRPPMLR
SSMDVTILSHCELSTELAVTDTIVVTSELVMPFTVGTWLRGVAQNWSKYAWVAIRYTYLPSCPTTTSGAIHMGFQYDMAD
TLPVSVNQLSNLKGYVTGPVWEGQSGLCFVNNTKCPDTSRAITIALDTNEVSEKRYPFKTATDYATAVGVNANIGNILVP
ARLVIAMEGGSSKTAVNTGRLYASYTIRLIEPIAAALNL
>gi|9629159|ref|NP_044329.1| coat protein [[NAME] yellow mosaic virus]
MATNHVLASQLPVNTKSSEIPLQSGTPPPTIIYPFQIEMASLGTADASDSISIASNSLLASVTTLYRHAKLTSLKATIHP
TGQAPAFPTTVALAWVPYNSTATSAQILSVYGGQMFCIGGSINSLSPIDVPCNLTNVNPIIKDSVTYSDTPKLLLYSIAQ
ETAPTLATCSVTITGTLTLHSPLLQATA
>gi|9629172|ref|NP_044334.1| capsid protein [Papaya mosaic virus]
MSKSSMSTPNIAFPAITQEQMSSIKVDPTSNLLPSQEQLKSVSTLMVAAKVPAASVTTVALELVNFCYDNGSSAYTTVTG
PSSIPEISLAQLASIVKASGTSLRKFCRYFAPIIWNLRTDKMAPANWEASGYKPSAKFAAFDFFDGVENPAAMQPPSGLI
RSPTQEERIANATNKQVHLFQAAAQDNNFTSNSAFITKGQISGSTPTIQFLPPPE
>gi|20177423|ref|NP_619750.1| capsid protein [Potato aucuba [NAME]]
MVDSKKTETPQVIDASKKTESSKTSHAGRVQFLSAPKQFSASDVRSSPTLTDLDEIAYEVRTTSIASPAEIEAVSQLWIM
NTEIPADKVALIAIDMARAYADVGASRKAVLLDAPALAPTVARSRLAQLMAGAGISPRQFCSYYAKIVWNLMLHKNEPPA
NWAKIGFKEDYKFAAFDFFDAVDSPAALEPSQWVRHPTDKERAAHGVVKWASLSRERLQEGTSITTVAELNKGHLGGYNN
LPALMAPPS
>gi|20522129|ref|NP_620675.1| capsid protein [[NAME] clover necrotic [NAME]]
MSTKAPKKSKQRSKPRNRNPSTSVKTVTIPFAKTQIVKTVNPPPKPTKAALHTQLVLSVVGSIALRANNGKASQRFRLNP
SNPALFPTIAYEAANYDMYRMKKLTLRYVPLVTVQNSGRVAMIWDPDSQDSVPQSRQEISAYSRSISTAVYEKCSLTIPA
DNQWRFVADSNVVDRKLVDYGQLLFVNHSGSEGIETGDVFLECEVEFKGPQPTATVVQRGIIDRGGVLTGEGPSYLLPTD
IVITATGISMNLDVAGTYLVTLVVTSSGSGNLQVLGNSTLVGDFRTAYSGINFIATFVLTSTGVPSPTSSILFNESTGVT
RAQFSIVRSKPSNAYVFG
>gi|189042977|ref|NP_612582.2| capsid protein [Carnation Italian ringspot virus]
MTMVLRNSGTMVPQGGNKMSKMAKNASQQGLQAGAAYLMSNPKGALKKGKDAWNYMTAGGVPSGIVHSGGMKGAIMAPVA
VTRQLRGSKPKFSGRTSGSVTVSHRELITQVNNSTQFVVNGGVTGNLRQVNPLNGTLFSWLPSIAANFDQYTFNSVTLHY
VPLCATTETGRVAMYFDKDSEDLEPADRVELANYATLKETAPWAEAMLRIPTDRIKRYNDDSSVNDRKLIDLGQIGIATY
GGSGTNPVGDVFISYSVTLHFPQPTAAGVQTRRLDLTSVLDTNVGPSYTITSSTATVYTVAFRTVGTFMLFGAVRSTGSP
VIGLSSANIAINSNTTLNTAGTAFSYMTNVTVSALPASITFTVVGVITSSTSHAVRASRTNNADMI
>gi|11067740|ref|NP_067738.1| coat protein [Chayote mosaic virus]
MSANVPVKVPQPSVPAPAKSLPTPSSELSSAIVLPFQILATTFGSVETAFQISLSSHPSLQKLMAPYRHVQLVECEAVFC
PNSFAVSAPITINAVWTTANSPASPVDILQIYGGRPFTFGGSLQSTSESILPLPGNFTNAMLKDSVAYLDTPKLLAYSPV
PSSPSKLPSVHLLIRGKLRLSSPLLLASPSS
>gi|9626697|ref|NP_040969.1| coat protein [Eggplant [NAME]]
MEDTAIIRSPQPSINAPGFHLPPTDSQQSSAIELPFQFQATTFGATETAAQISLASANAITKLASLYRHVRLTQCAATIT
PTAAAIANPLTVNIVWVSDNSTAKPTEILNVFGGSSYTFGGALNATKPLTIPLPMNSVNCMLKDSVLYTDCPKLLAYSAA
PSSPSKTPTATIQIHGKLRLSSPLLQAN
>gi|9627956|ref|NP_042511.1| coat protein [Mushroom bacilliform virus]
MANRRQSRRRGNKNRNSATVRRAPPNRATQSSSGKVKFVKWIAASPTKLIPHIGENETSYGVLFDITGTTFPELSSLMSR
HSRYRVLSLGARIVPYDPNCLGAHSVKVFAESVYDSSATPTVPSVHYLQSNGCRVVPANKQLSSPPSSDVNKYYEICSDD
AVIGRIMYAWNGPGLSTARVGFCSFEVYADLEFDGIRE
>gi|28144362|ref|NP_778218.1| coat protein [Turnip rosette virus]
[NAME]
LQVIPETFPSRLKGLATSWSKFKWQAIKFVYMSICPTTERGSVHFGFLYDTVDNLPGTVGEISTLQGYTTGSVWAGTSGN
[NAME]
FCVDLIDTIASSLNV
>gi|171473632|ref|YP_001798596.1| coat protein [Hop mosaic virus]
MSGSTEAGKLAPEAQKPKHGGEETKLKEKVGAGESSTVSVDDYAAGLKDLEAVREEMLEARLEKLREFMRRRRSAVQITN
SGLETGRPALXLTADMRSDPANPYCKPSLDSLLRIPPKPVSNNMATAEDIMKIYTNLEGLGVPTEHIQRVIIQAVIYCKD
ASSSVYLDPRGSFEWPGGAIAADSVLAIMKKDAETLRRVCRLYAPVTWSYMLVHNQPPSDWAAMGFQFEDRFAAFDCFDY
VENAAAVQPLEGIVRRPTPREKLAHNTHKDMALRKANRNQLFGNMDVEVTGGRSGPEIIRDYSKSSR
>gi|212671380|ref|YP_002308381.1| coat protein [[NAME] ash mosaic virus]
MGATTTAAGMQPATAPLPGATATLTSTPPAVGPLAPTSLAPSSSTLNAPSASGITIPERDSEHALQLPSLADLAGRFHSI
EXNKVATVATIQAILSTLAAQQKPSTSADLADLAVACYQNGSSRLSAVTGKSASGHALAAIKGAVEKHCTLRQFCMYYAK
VCYNFGRLTKQPPANWAAKGYKENSKYAAFDFFSGTLVPDSIVPPPAEGNMFKPSEEEILAHNLNAKLAIAESRGMQNQY
STRGNMLGMQQVREAPPPPLLTFTE
>gi|212671435|ref|YP_002308451.1| coat protein [Hippeastrum latent virus]
MATKVADNPSDPNVGEPKATKPGDNVDPAAAADLFDDARLMEDQIEERMARLREFLMKQQRAVQVTNPSFELGRPKLKML
DSVRSDPTNLYNKPTIDQLCRIRPKSISNNMATSQDMAAITVAIESLGVPSEKVQTVIIQAVAYCKDASSSAYLDPQGTF
EWEGGAIMADAVLAILKRDAGTLRRVCRLYAPVTWNHMLAHNAPPSDWAAMGFQYTERFAAFDCFDYVENQAAVQPFEGL
IRRPTPAEKIAHNTHKRIALDRANRNERFSSLEAEITGGRLGPEIERSYWKT
>gi|212671458|ref|YP_002308468.1| coat protein [Hosta virus X]
MASDAPTPPAAPSPVTFTAPTQEQLTSLALPIISTRLPSPDVLNQISVKWQELGVPTASISSTAIALCMACYHSGSSGST
LIPGLAPGTTVNYTSLAAAVKSLATLREFARYFAPIIWNYAIEHKIPPANWAAMGYKENTKYAAFDTFDSILNPAALQPT
GGLIRQPTEEELLAHQANSALHIFDSLRNDFASTDGRVTRGHITSNVNSLNYLPAPEGSS
>gi|212498617|ref|YP_002308431.1| capsid protein [Grapevine Algerian latent virus]
MALALNTRRNNNGKVMEMLAYKAATAGAELALANVGGITRGVAQLGKSMMGKKKRNKNVSQVGALGGAVVAPVAVTRQIR
GSKPRFSGRGTGSITVTHREYLGQVVTTADLQVNGGITGNLLKVNPLNGILFSWLPTIAAGYDQYAFNRLSLQYVPLCAT
TATGRVAMYWDKDSTDLEPTDRVELANQAILKETSPWAEANLTIPTDRIKRFCDDSAVADRKLVDLGQLGVATYGGTAVV
AGDVFVSYTVTFYNPQPLATLMDTTRINASNTVITNVGPQYSRIDVVSGNQWLITFRGVGKFVIFGSIRGTGAVVLALSG
VIVNSSTTLTTPTGAMYVANVTVSSLPASLSYTMTTVTAGLHSAVRATRANDMGTP
>gi|212498907|ref|YP_002308443.1| coat protein [Nemesia ring necrosis virus]
MEELKPISVKQPSIPAPGTKLPPAPGQQSSAIVQPFQISVTDLGVAEVNVQITLSSDPTLSQLTAFYRHADLVECSAVLF
PNFTSSSNPTHCDLAWVPANSTASPKAILRTYGGNRFTLGGPITANEVISIPLPMNSVNCTIKDSVMYTDSPRLLAYSPA
PLTAKTTPSGTLVIRGKVRLSSPLLQPLTASS
>gi|212498836|ref|YP_002308440.1| coat protein [Scrophularia mottle virus]
MEEVKPIKVQQPSIPAPGTKLVPNDGQQSPAMVMPFQLTVTDFGVKETSVQITLSSDPGIAAITASYRHASIVECQAVLF
PNRTSSSNPTHCDLVWVPANSTASPTTILKTFGGSRFTLGGPITANQIITIPLPLDSVNCRIKDSVLYTDSPRLLAHSPA
PSTTQTVPSGSLIIRGKIRLSSPLLQPSSSS
>gi|212498988|ref|YP_002308446.1| coat protein [Plantago mottle virus]
MEETKPIKVKQPSIPAPGTHLAPNEGPQSSAIVLPFQLTATDLGVAEVSLQVTLSSDAALANIISSFRHATLIECEAVLF
PNMTSASNPTHCDIVWVPANSTAAPKTILQTYGGARFTLGGSITASQIITVPLPMNSVNPIIKDSVLYLDSPRLLVHSPA
PTSAKTVPSGSLVLRGKVRLSSPLLQPSQSS
>gi|212525936|ref|YP_002308579.1| coat protein [[NAME] vein yellowing virus]
MDEVKPISAPQPSIPAEGSHLVNPKSAVEPHIILPFQISAAEFGVRETSVQITLSSDPTISTYTALYRHAQLVECEAILF
[NAME]
PLKPSSVPSGTLLVRGRVKLSSPLPQPSG
>gi|212498722|ref|YP_002308437.1| coat protein [Imperata yellow mottle virus]
MGRSKQKKSKRMPQAAAVKNQQPAPSRRQGRSGSSQRQPSNGITTSAPMATSGIGPSRSLGPLGGAITVEEVEHLGAFTR
GTTAAGQTRAYLCMPSSLIRLSNIARCFARWRPLQWSVFYVPEVGTQTNGAIQMAYLYDYGDSLPTTTGQISACSGFLTA
AVWCGAAGAQLLSGKAPRSQNLVIAHMDCRRSEWMRVVDGLTDTDPAHVVNTYLPARAVVRSSLLPSTEDTPGQLYVRYR
IMLRDAVAPGLNDASSSAPSVDQERKGNAAVVS
>gi|14251195|ref|NP_116491.1| coat protein [Aconitum latent virus]
MSETEAQIKAREEAEIARVVQAKIDKAEVAKKNAEKLKTFINPGLDDDDAEGNLEARLDSLRDYLRKRRGAIRVTNNGLE
TGRPALQLSGDMRPDPTNPYNRPSIEALCKIKPRAVSNNMATTEDMMTIFVNLEGLGVPTEHVQSVVIQAVMYCKDASSS
AFLDPRGTFEWPSGAIMADSVIAIMKKDAETLRRVCRLYAPVTWNYMLAHNAPPSDWAAMGFQYDDRFAAFDCFDYVENK
AAVQPLEGLIRRPTPREKVAHNTHKDLALRQANRNQTFGNLSVEVTGGRNGPELTRDHNLSNNK
>gi|32469482|ref|NP_862839.1| coat protein [Pea stem necrosis virus]
MGNLPNNSDDFWVNKVRGWWRRASRESYSSCGCCDRCPWKAPCYHSRNSNTVVTHREYVTDVSNSSGVFVNNSSGSSSVF
RINPSNTRVFNWLSSIAGSYDSYKFTRVRFTYVPYAGSNTPGRLYLGWDADSQDVIQPDRASLANFSPTSEDSVWTDSYL
VIPVDREWRFVDDTNISSRKLVDLGQLVLATWGGVDNTVCGEVYVEYSVELRQPQPPSGFVQVGRVDVPGILTFTGPAFV
PASDLSISDTSFSFNLNTAGQYALSIDLQATTSGTLTVAGNCTLLGVVKSQFASGVGIYMCIVRSTGGPNSAASISIGTL
TGLSRVQFFLSRGTTSAGIRVTCISSERHLS
>gi|9626094|ref|NP_056771.1| coat protein [Potato virus M]
MGDSTKKAETAKDEGTSQERREARPLPTAADFEGKDTSENTDGRAADADGEMSLERRLDSLREFLRERRGAIRVTNPGLE
TGRPRLQLAENMRPDPTNPYNRPSIEALSRIKPIAISNNMATSEDMMRIYVNLEGLGVPTEHVQQVVIQAVLFCKDASSS
VFLDPRGSFEWPRGAITADAVLAVLKKDAETLRRVCRLYAPVTWNHMLTHNAPPADWAAMGFQYEDRFAAFDCFDYVENT
AAVQPLEGLIRRPTPREKVAHNTHKDIAVRGANRNQVFSSLNAEVTGGMNGPELTRDYVKSNRK
>gi|9626128|ref|NP_040351.1| coat protein [Pea early-browning virus]
MVKGKYEGFSASGAKDLVFSAWVEVGNWNEVLRRLMDLKFALQADRDKIPGVLSDLNMESPFTRFKRFSDGEEYALLIKE
ANIAIAQIQAASAFKRRADEKNAVSGLLTQSAQQPTSSIQGSSQATVVRPPRESDSAFAEDNFSFGKFDDASTAFHKARS
YLRGLRLVALDQEDFEEKFKLVWKETPQQQQNVTGPTVPATSSGGGKGPGVA
>gi|9626977|ref|NP_041231.1| capsid protein [Melon necrotic spot virus]
MAMVKRINNLPTVKLAKQALPLLANPKLVNKAIDVVPLVVQGGRKLSKAAKRLLGAYGGNISYTEGAKPGAISAPVAISR
RVAGMKPRFVRSEGSVKIVHREFIASVLPSSDLTVNNGDVNIGKYRVNPSNNALFTWLQGQAQLYDMYRFTRLRITYIPT
TGSTSTGRVSLLWDRDSQDPLPIDRAAISSYAHSADSAPWAENVLVVPCDNTWRYMNDTNAVDRKLVDFGQFLFATYSGA
GSTAHGDLYVEYAVEFKDPQPIAGMVCMFDRLVSLSEVGSTIKGVNYIADRDVITTGGNIGVNINIPGTYLVTIVLNATS
IGPLTFTGNSKLVGNSLNLTSSGASALTFTLNSTGVPNSSDSSFSVGTVVALTRVRMTITRCSPETAYLA
>gi|9627256|ref|NP_041740.1| coat protein [[NAME] yellow mottle virus]
MARKGKKTNSNQGQQGKRKSRRPRGRSAEPQLQRAPVAQASRISGTVPGPLSSNTWPLHSVEFLADFKRSSTSADATTYD
CVPFNLPRVWSLARCYSMWKPTRWDVVYLPEVSATVAGSIEMCFLYDYADTIPRYTGKMSRTAGFVTSSVWYGAEGCHLL
SGGSARNAVVASMDCSRVGWKRVTSSIPSSVDPNVVNTILPARLAVRSSIKPTVSDTPGKLYVIASMVLRDPVDPTLNT
>gi|9627408|ref|NP_041874.1| coat protein homolog [[NAME] yellows virus]
MLAPEARGDLIHFTENTRDAMETFFNSYDLAEYSEVNPNKLNRKETDELLGVIRERFKSELVITDEDFVKHLAFALIRAA
NITTSVKVNYVGAYEYTIGGKKFLVKDAWVFPLIKECMKKFNKPNPVRTFCATFEDAYIVIARSLPKLFLNRTIGKRGIP
SGYEFLGADFLTATSVCLNDHEKAIVLQASRAAIDRAVSSSVDGKIVSLFDLGRLS
>gi|9627409|ref|NP_041875.1| coat protein [Beet yellows virus]
MGSAEPISAIATFENVSLADQTCLHGEDCDKLRKNFEECLKLKGVPEDNLGIALGLCLYSCATIGTSNKVNVQPTSTFIK
ASFGGGKELYLTHGELNSFLGSQKLLEGKPNKLRCFCRTFQKDYISLRKEYRGKLPPIARANRHGLPAEDHYLAADFIST
STELTDLQQSRLLLARENATHTEFSSESPVTSLKQLGRGLGTGR
>gi|9627979|ref|NP_042579.1| nucleocapsid protein [Lactate dehydrogenase-elevating virus]
MSQNKKKSGQNKGANQQLNQLINALLRNAGQNKGKGQKKKKQPKLHFPMAGPSDLRHVMTPNEVQMCRSSLVTLFNQGGG
QCTLVDSGGINFTVSFMLPTHATVRLINASANSSA
>gi|9627989|ref|NP_042587.1| coat protein [Bamboo mosaic virus]
MSGTGTGTGRGTGTGVGGTGGTGGTGGGGTGRGQQAAPQPWETKFTKDDLAAIEPKPASANVPNTKQWISIQAGLIKAGA
TDANFMKVLLGLSLEAFDRGSSEATTWDGITEGVEHRAAANAIKEANCPIHKVTYYLAKPTFAIRQSKNLPPANFAKKNV
PSQYKWCAFDAFDGLYDPTCLASELPYDAPSEIDRMASATFKTIQIKIANDQKGFNLNYNPNVTQARLPNAPLPALPEPT
SD
>gi|9629350|ref|NP_044575.1| coat protein [Garlic virus X]
MGDRNQGINPNQGLNAQVQGDGASNQNQRPNRNPPPRPLADSNAQNSIMPSENDLAAIASDVTSNSVATQETIREILSTL
QASGPAATPKDLFSLAWACYHNGSSRFTTMTTDAPCGMPPAELKDLVEDYCTLRQFCGYYAKTCYVTGKQQNKPPANWSR
KGFQEESKFAAFDFFNAVMSDSSPTPPGGMRFKPTHEEIVGHSMNAKMSIIESPKASNMVSTRADSLAQQQIHEAPKPLM
LTF
>gi|9629356|ref|NP_044580.1| coat protein [Cucumber green mottle [NAME]]
MAYNPITPSKLIAFSASYVPVRTLLNFLVASQGTAFQTQAGRDSFRESLSALPSSVVDINSRFPDAGFYAFLNGPVLRPI
FVSLLSSTDTRNRVIEVVDPSNPTTAESLNAVKRTDDASTAARAEIDNLIESISKGFDVYDRASFEAAFSVVWSEATTSK
A
>gi|9629465|ref|NP_054029.1| coat protein [Cymbidium mosaic virus]
MGEPTPAPAATYSAADPTSAPKLADLAAIKYSPVTSSIATPEEIKAITQLWVNNLGLPADTVGTAAIDLARAYADVGASK
NATLLGFCPTKPDVRRAALAAQIFVANVTPRQFCAYYAKVVWNLMLATNDPPANWAKAGFQEDTRFAAFDFFDAVDSTAA
LEPAEWQRRPTDRERAAHSIGKYGALARQRIQNGNLITNIAEVTKGHLGSTNTLYALPAPPTE
>gi|9630742|ref|NP_047285.1| 28 [NAME] coat protein [Grapevine rupestris stem pitting-associated virus]
MASQIGKLPGESNEAFEARLKSLELARAQKQPEGSNAPPTLSGILAKRKRIIENALSKTVDMREVLKHETVVISPNVMDE
GAIDELIRAFGESGIAESVQFDVAIDIARHCSDVGSSQRSTLIGKSPFCDLNRSEIAGIIREVTTLRRFCMYYAKIVWNI
HLETGIPPANWAKKGFNENEKFAAFDFFLGVTDESALEPKGGIKRAPTKAEMVANIASFEVQVLRQAMAEGKRSSNLGEI
SGGTAGALINNPFSNVTHE
>gi|106060736|ref|NP_056821.2| 58 kd capsid protein [Norwalk virus]
MMMASKDATSSVDGASGAGQLVPEVNASDPLAMDPVAGSSTAVATAGQVNPIDPWIINNFVQAPQGEFTISPNNTPGDVL
FDLSLGPHLNPFLLHLSQMYNGWVGNMRVRIMLAGNAFTAGKIIVSCIPPGFGSHNLTIAQATLFPHVIADVRTLDPIEV
PLEDVRNVLFHNNDRNQQTMRLVCMLYTPLRTGGGTGDSFVVAGRVMTCPSPDFNFLFLVPPTVEQKTRPFTLPNLPLSS
LSNSRAPLPISSMGISPDNVQSVQFQNGRCTLDGRLVGTTPVSLSHVAKIRGTSNGTVINLTELDGTPFHPFEGPAPIGF
PDLGGCDWHINMTQFGHSSQTQYDVDTTPDTFVPHLGSIQANGIGSGNYVGVLSWISPPSHPSGSQVDLWKIPNYGSSIT
EATHLAPSVYPPGFGEVLVFFMSKMPGPGAYNLPCLLPQEYISHLASEQAPTVGEAALLHYVDPDTGRNLGEFKAYPDGF
LTCVPNGASSGPQQLPINGVFVFVSWVSRFYQLKPVGTASSARGRLGLRR
>gi|9626930|ref|NP_041195.1| coat protein [[NAME] mosaic virus]
MSSSQKKAGGKAGKPTKRSQNYAALRKAQLPKPPALKVPVVKPTNTILPQTGCVWQSLGTPLSLSSFNGLGVRFLYSFLK
DFAGPRILEEDLIYRMVFSITPSYAGTFCLTDDVTTEDGRAVAHGNPMQEFPHGAFHANEKFGFELVFTAPTHAGMQNQN
FKHSYAVALCLDFDAQPEGSKNPSYRFNEVWVERKAFPRAGPLRSLITVGLLDEADDLDRH
>gi|9632358|ref|NP_049339.1| 19 [NAME] capsid protein [Soil-borne wheat [NAME]]
MAVNKGYTGYNKELNAMAATHAYIRLSTLMSQIESWQATRASVLTHLGVMLNGVSKLGERSFFSRTKRFGAHTSDGDEIF
[NAME]
QDSFEAKYNLKWEGSS
>gi|9635446|ref|NP_059482.1| coat protein readthrough [Chinese wheat [NAME]]
MAVKSGYTVFNRELNVMANTHAYIRLSALLSQVETWQSTRTSVLSHLGIMLNGVSKLGERNFFSRSKRFGTHTLDGDEIF
CDLGGEGVSQVLTRLTVALGAAKGEGAQSRNAKRGAPPAAGQIETEEQGQTDQSLAISNALGELMTYVSSKEYTMNECYT
QDSFEAKYNLKWEGSSXRDGVSDKSRVQVVEDLSNRLTLADDLGILPRRDNMGMIIKDEPEVVYSELEDRLLSFEHSVYH
PCAITVEREISTTSDLLVVPDTEDVEFVENDSVIVTEVMVDDESNYYWLYAVLLIISFLITGFIALSRSFIHFLGDGRQG
PGGQTRYRIASALWAVRLWLLRHATLRFCGLGVVRKTHTRSSMRRYLRDYNYQLDMWEAAASCSPSEALIVADQHIFVSG
VMRLLDYEGDLTCVGDIRKVMTNYGMKNFSFEKWLDKQTVSCSLVVLNDKVKNDDVHLDENMLSLENASIEEVLACVIET
QRGSLYFNDIIALQFAFKLIGTPEFSDFVLAYKGPLYPCYVEAIKRHGDELAKWRVDEDRNRQSEKAIEWLLLAGQGAFV
VSSGVTVGVLIYRIHKWLKKRLLLRALQSLPSVGGSSGGGGGALPMSVLNQFGQALTFDERLAALQHHLDLGEDNLDYCS
STDLKQEVANVLATRADDAFHVADVPYVVDVVRSVGSVSTNLGGSVVGGVSARVSDGASSSLVLSNARSTKSRRRSVSKK
DRVFPGGYSVYSDMLPSKIGGKSGVSSLKMKIASKPLAI
>gi|9635447|ref|NP_059483.1| coat protein [Chinese wheat [NAME]]
MAVKSGYTVFNRELNVMANTHAYIRLSALLSQVETWQSTRTSVLSHLGIMLNGVSKLGERNFFSRSKRFGTHTLDGDEIF
CDLGGEGVSQVLTRLTVALGAAKGEGAQSRNAKRGAPPAAGQIETEEQGQTDQSLAISNALGELMTYVSSKEYTMNECYT
QDSFEAKYNLKWEGSS
>gi|10314011|ref|NP_066242.1| capsid protein [Acute bee paralysis virus]
MNAAFRNIIPADQETNTSNVHNTQLASTSEENSVETEQITTFHDVETPNRINTPMAQDTSSARSMDDTHSIIQFLQRPVL
IDHIEVIAGSTADDNKPLNRYVLNRQNPQPFVKSWTLPSVVLSAGGKGQKLANFKYLRCDVKVKIVLNANPFIAGRLYLA
YSPYDDRVDPARSILNTSRAGVTGYPGIEIDFQLDNSVEMTIPYASFQEAYDLVTGTEDFVKLYLFTITPILSPTSTSAS
SKVDLSVYMWLDNISLVIPTYRVNTSIVPNVGTVVQTVQNMTTRDSETIRKAMVALRKNNKSTYDYIVQALSSAVPEVKN
VTMQINSKKNNSNKMATPVKEKTKNIPKPKTENPKIGPISELATGVNKVANGIERIPVIGEMAKPVTSTIKWVADKIGSV
AAIFGWSKPRNLEQVNLYQNVPGWGYSLYKGIDNSVPLAFDPNNELGDLRDVFPSGVDEMAIGYVCGNPAVKHVLSWNTT
DKVQAPISNGDDWGGVIPVGMPCYSKIIRTTENDTTRTNTEIMDPAPCEYVCNMFSYWRATMCYRIAIVKTAFHTGRLGI
FFGPGKIPITTTKDNISPDLTQLDGIKAPSDNNYKYILDLTNDTEITIRVPFVSNKMFMKSTGIYGGNSENNWDFSESFT
GFLCIRPITKFMCPETVSNNVSIVVWKWAEDVVVVEPKPLLSGPTQVFQPPVTSADSINTIDASMQINLANKADENVVTF
FDSDDAEERNMEALLKGSGEQIMNLRSLLRTFRTISENWNLPPNTKTAITDLTDVADKEGRDYMSYLSYIYRFYRGGRRY
KFFNTTALKQSQTCYVRSFLIPRYYTADNTNNDGPSHITYPVLNPVHEVEVPYYCQYRKLPVASTTDKGYDASLMYYSNV
GTNQIVARAGNDDFTFGWLIGTPQTQGITRTETK
>gi|14142014|ref|NP_115483.1| coat protein [Ribgrass mosaic virus]
MVYNITSSNQYQYFAAMWAEPTAMLNQCVSALSQSYQTQAARDTVRQQFSNLLSAIVTPNQRFPETGYRVYINSAVLKPL
YESLMKSFDTRNRIIETEEESRPSASEVANATQRVDDATVAIRSQIQLLLNELSNGHGLMNRAEFEVLLPWATAPAT
>gi|15081553|ref|NP_150083.1| nucleocapsid protein [Bovine coronavirus]
MSFTPGKQSSSRASSGNRSGNGILKWADQSDQSRNVQTRGRRAQPKQTATSQQPSGGNVVPYYSWFSGITQFQKGKEFEF
[NAME]
ILDRDPSSDEAIPTRFPPGTVLPQGYYIEGSGRSAPNSRSTSRASSRASSAGSRSRANSGNRTPTSGVTPDMADQIASLV
[NAME]
GAFFFGSRLELAKVQNLSGNLDEPQKDVYELRYNGAIRFDSTLSGFETIMKVLNENLNAYQQQDGTMNMSPKPQRQRGQK
NGQGENDNISVAAPKSRVQQNKIRELTAEDISLLKKMDEPFTEDTSEI
>gi|15150437|ref|NP_150432.1| coat protein [Soybean dwarf virus]
MVAVSNVAIQRRRTRRAARRAPRVQLMAVPTVTSRPQRRGRQRRRRRNNRGGSFISGGSGKAHTFVFSKDGINGSSKGSI
TFGPSLSECKPFSDGILKAYHEYKITSILLQFITEASSTSSGSIAYELDPHCKYSEIQSLLNKFSITKSGSKRFPTRAIN
GLEWHDTSEDQFKIHYKGNGESKIAGSFKISINVLTQNAK
>gi|18254500|ref|NP_543052.1| coat protein [Crucifer tobamovirus]
MSYNITNSNQYQFFAAVWAEPIAMLNQCISALSQSYQTQAARDTVRQQFSNLLSAIVTPNQRFPETGYRVYVNSAVLKPL
YEALMKSFDTRNRIIETEEESRPSASEVANATQRVDDATVAIRSQIQLLLSELSSGHGLMNRAEFEVLIPWATAPAK
>gi|19387581|ref|NP_598314.1| nucleocapsid protein [Porcine epidemic diarrhea virus]
MASVSFQDRGRKRVPLSLYAPLRVTNDKPLSKVLANNAVPTNKGNKDQQIGYWNEQIRWRMRRGERIEQPSNWHFYYLGT
GPHGDLRYRTRTEGVFWVAKEGAKTEPTNLGVRKASEKPIIPKFSQQLPSVVEIVEPNTPPASRANSRSRSRGNGNNRSR
SPSNNRGNNQSRGNSQNRGNNQGRGASQNRGGNNNNNNKSRNQSNNRNQSNDRGGVTSRDDLVAAVKDALKSLGIGENPD
RHKQQQKPKQEKSDNSGKNTPKKNKSRATSKERDLKDIPEWRRIPKGENSVAACFGPRGGFKNFGDAEFVEKGVDASGYA
QIASLAPNVAALLFGGNVAVRELADSYEITYNYKMTVPKSDPNVELLVSQVDAFKTGNAKLQRKKEKKNKRETTLQQHEE
AIYDDVGAPSDVTHANLEWDTAVDGGDTAVEIINEIFDTGN
>gi|19551003|ref|NP_599249.1| coat protein [[NAME] nervous necrosis virus]
MVRKGDKKLAKPPTTKAANSQPRRRATQRRRSGRADAPLAKASTITGFGRATNDVHISGMSRIAQAVVPAGTGTDGKIVV
DSTIVPELLPRLGHAARIFQRYAVETLEFEIQPMCPANTGGGYVAGFLPDPTDNDHTFDALQATRGAVVAKWWESRTVRP
QYTRTLLWTSTGKEQRLTSPGRLVLLCVGSNTDVVNVSVMCRWSVRLSVPSLETPEDTTAPITTQAPLHNDSINNGYTGF
RSILLGATQLDLAPANAVFVTDKPLPIDYNLGVGDVDRAVYWHLRKKAGDTQVPAGYFDWGLWDDFNKTFTVGAPYYSDQ
QPRQILLPAGTLFTRVDSEN
>gi|19744916|ref|NP_604485.1| coat protein [Apple mosaic virus]
MVCKYCNHTHPGSCAGCKWCHSTNRFAPPKRAVARQANPNKGKIPVSVSRAGRSIRRGGQLGRLGARMLSRKFLKGHRVL
SSREVTATVEGRFVNIDFADVFRDLLEKDLKVYTFIIRVNSLSSNGWIGLVEDYDESNPKGPNPMDRKGFKKDQPRGGMW
EAPPNTTFDDFVRKFRLVLEFKTNFAAGAKVFMRDLYVITSELPPVQIPTNVLLIDEDLLEL
>gi|19744923|ref|NP_604486.1| coat protein [Barley stripe [NAME]]
MPNVSLTAKGGGHYIEDQWDTQVVEAGVFDDWWVHVEAWNKFLDNLRGINFSVASSRSQVAEYLAALDRDLPADVDRRFA
GARGQIGSPNYLPAPKFFRLDKRTIAELTRLSRLTDQPHNNRDIELNRAKRATTNPSPPAQAPSENLTLRDVQPLKDSAL
HYQYVLIDLQSARLPVYTRKTFERELALEWIIPDAEEA
>gi|20087043|ref|NP_613277.1| coat protein [[NAME] chlorotic mottle virus]
MSTVGTGKLTRAQRRAAARKNKRNTRVVQPVIVEPIASGQGKAIKAWTGYSVSKWTASCAAAEAKVTSAITISLPNELSS
ERNKQLKVGRVLLWLGLLPSVSGTVKSCVTETQTTAAASFQVALAVADNSKDVVAAMYPEAFKGITLEQLTADLTIYLYS
SAALTEGDVIVHLEVEHVRPTFDDSFTPVY
>gi|20143448|ref|NP_619578.1| coat protein [Elm mottle virus]
MSGNAIEVNGRWYQPAPNNAPTGSRGGRRQPTARSRQWAQQASVRRSQPPLSVNSVPALTWRSFPGEQWHEVSGYSFPDK
WSAGTLAYMTLRAELGKIKTLHDTTKVYSVMIGFVSKSDGYAGFMDNFDANHATGPVAPDRIRVKKGKYCAKQQVFPTGT
TVSEVKANWNMVWDFDTAPATGSEREIFITRFYVSTTPLPGVKPPANFLVVEE
>gi|20162542|ref|NP_619722.1| coat protein [Maize chlorotic mottle virus]
MAASSRSTRGRKQRGRSVEAKSRAIRANPPVPRPNPQRNRPPPAGTTCSMSEILLAVSATTADQILEIPVCAGIDFPAGT
SPRYIGAAKWLAAQSQMWNTIVFNSVRITWETFTADTTSGYISMAFLSDYMLSIPTGVEDVARIVPSATIALKNRGPSIV
MPQNRTVFRCIQAGQFAALGSAADKQMYSPGRFIVAIPKASATQAVGQIKISYSVSYRGAAILQPALVPGPGLANH
>gi|20177428|ref|NP_619743.1| coat protein [Pepper mild mottle virus]
MAYTVSSANQLVYLGSVWADPLELQNLCTSALGNQFQTQQARTTVQQQFSDVWKTIPTATVRFPATGFKVFRYNAVLDSL
VSALLGAFDTRNRIIEVENPQNPTTAETLDATRRVDDATVAIRASISNLMNELVRGTGMYNQALFESASGLTWATTP
>gi|20260790|ref|NP_620104.1| coat protein [Cucurbit aphid-borne yellows virus]
MNTVAARNQNAGRRRRRNQRPARRDRVVVVNPIGGPPRGRRQRRNRRRPNRGGRARRGSPGETFVFSKDNLTGSSTGSIT
FGPSLSESPAFSSGILKAYHEYKIIMVQLEFISEASSTSSGSISYELDPHCKLSSLQSTINKFGITKSGLRRWTAKQING
MEWHDATEDQFKILYKGNGSSSVAGSFRITIKCQVQNPK
>gi|20386800|ref|NP_620467.1| coat protein [[NAME] bushy dwarf virus]
MSKKAVPPIVKAQYELYNRKLNRAIKVSGSQKKLDASFVGFSESSNPETGKPHADMSMSAKVKRVNTWLKNFDREYWDNQ
FASKPIPRPAKQVLKGSSSKSQQRDEGEVVFTRKDSQKSVRTVSYWVCTPEKSMKPLKYKEDENVVEVTFNDLAAQKAGD
[NAME]
DSSSFYIRKWANFLQEVSAVLPVGTGKSSTIVLT
>gi|20428627|ref|NP_620506.1| coat protein [[NAME] mottle virus]
MARKKGKSASQVIVLKEKSRKKRQKSRGQQPTRQVTPVSAPAAMGTQITYRGPQVVTQYGDITPAKNSGSLVRVTSSATA
GTEVSGTVLFNVRNATELPWLSGQGSRYSKYRVRYAHFTWEPIVGSNTNGEVAMAMLYDVADVTSITIERLMQTRGGTWG
PIWSPTRKRLSYDPEHASLPWYLSGVSSGAAAGNIQTPFQIAWAAQSSLVSTTLGRIMAEYLVELTDPVDVTINQ
>gi|20428582|ref|NP_620526.1| capsid protein [Red clover necrotic [NAME]]
MSSKAPKKSKQRSQPRNRTPNTSVKTVAIPFAKTQIIKTVNPPPKPARGILHTQLVMSVVGSVQMRTNNGKSNQRFRLNP
SNPALFPTLAYEAANYDMYRLKKLTLRYVPLVTVQNSGRVAMIWDPDSQDSAPQSRQEISAYSRSVSTAVYEKCSLTIPA
DNQWRFVADNTTVDRKLVDFGQLLFVTHSGSDGIETGDIFLDCEVEFKGPQPTASIVQKTVIDLGGTLTSFEGPSYLMPP
DAFITSSSFGLFVDVAGTYLLTLVVTCSTTGSVTVGGNSTLVGDGRAAYGSSNYIASIVFTSSGVLSTTPSVQFSGSSGV
SRVQMNICRCKQGNTFILG
>gi|20522123|ref|NP_620682.1| coat protein [Tobacco rattle virus]
MGDMYDESFDKSGGPADLMDDSWVESVSWKDLLKKLHSIKFALQSGRDEITGLLAALNRQCPYSPYEQFPDKKVYFLLDS
RANSALGVIQNASAFKRRADEKNAVAGVTNIPANPNTTVTTNQGSTTTTKANTGSTLEEDLYTYYKFDDASTAFHKSLTS
LENMELKSYYRRNFEKVFGIKFGGAAASSSAPPPASGGPIRPNP
>gi|20564150|ref|NP_620719.1| coat protein [White clover mosaic virus]
MATTTATTPPSLTDIRALKYTSSTVSVASPAEIEAITKTWAETFKIPNDVLPLACWDLARAFADVGASSKSELTGDSAAL
AGVSRKQLAQAIKIHCTIRQFCMYFANIVWNIMLDTKTPPASWSKLGYKEESKFAGFDFFDGVNHPAALMPADGLIRGPS
DAEILAHQTAKQVALHRDAKPTWHKRCQLC
>gi|20564159|ref|NP_620759.1| capsid protein [Tomato aspermy virus]
MAQNGTGGGSRRPRRGRRNNNNNNSTARDKALLALTQQVNRLANIASSSAPSLQHPTFIASKKCRAGYTYTSLDVRPTRT
EKDKSFGQRLIIPVPVSEYPKKKVSCVQVRLNPSPKFNSTIWVSLRRLDETTLLTSENVFKLFTDGLAAVLIYQHVPTGI
QPNNKITFDMSNVGAEIGDMGKYALIVYSKDDVLEADEMVIHIDIEHQRIPSASTLPV
>gi|20564171|ref|NP_620774.1| coat protein [Tobacco streak virus]
MNTLIQGPDHPSNAMSSRANNRSNNSRCPTCIDELDAMARNCPAHNTVNTVSRRQRRNAARAAAYRNANARVPLPLPVVS
[NAME]
IPDPPVVGRLGFKKNTYRSRDFDLGGKLLNQLDDRAVVWCLDERRREAKRVQLAGYWIAISKPAPLMPPEDFLVNQD
>gi|20806009|ref|NP_620840.1| capsid protein [Plantago asiatica mosaic virus]
MALNTAPTADALAAMAFPVSSPSVPTAQELDTITSGLTTLGVPTDSLLSHALALVNACFDAGSSSFVTLSGPSPTPTISL
AQIAGVVKVTTTLRKFCRFYAKIIWNARLARNLPPAGFARANIKFEHRWAGFDFFDGLLNPAALEPPGGLSRTPTPDEVT
ANETARSLNLFEARASYSNLASTSTQFTRGQLSNTAPQVQFLPAPSD
>gi|20806014|ref|NP_620844.1| coat protein [[NAME] pepper virus]
MPYTVTSPSQLVYFGSVWADPITFIDLCTVALGNQFQTQNARTTVQQQFSDLFKTVPTRTNRFNDGENGFRVFRYNSTLD
PLISALMNSFDTRNRIIEVDNPANPNTSEVASATQRVDDATVNIRACINNLMNELVRGTGMMNTASFETVSNLTWTTTTT
T
>gi|20889384|ref|NP_624335.1| coat protein [Citrus leaf blotch virus]
MKITNDNAATINYWLAIVEPFLTSDEDRNSDDIIRKFRAVVAEHGDTEEVDPEVFFAIFSILATKYGRVYSKKVEELNES
LKAAILAGAEAEDLRNKLKDISQRYASQLEITADREQQLESLKKKGHEQPLTGSGSSEPVHAESAHAPQLHVVNDLQQFY
IPFNEYPSLTQSIGTSDIANDEHLKRVQLTLKITDTKVFSRTGFEFAISCGSRSTSDKDPYDGIIKISGKSHMRKDIAYA
IRTSGITVRQFCAAFANLYWNFNLARNTPPENWRKKGFTEGTKFAAFDFFYAVGSNAAIPTEADGSVRLIRPPTNEENEA
NSAMRYADIYEQNSKTAGHVTSSPLYNRGSSYESKNKAKLLEM
>gi|21644720|ref|NP_660273.1| coat protein [Southern bean mosaic virus]
MAKRLTKQQLTKAIANTLEAPATQSRRPRNRRRRRSAARQPQSTQAGVSMAPIAQGTMVRLREPSLRTAGGVTVLTHSEL
STELSVTNAIVITSELVMPYTMGTWLRGVAANWSKYSLLSVRYTYLPSCPSTTSGSIHMGFQYDMADTLPVSVNQLSNLR
GYVSGQVWSGSSGLCYINGTRCLDTANAITTTLDVGQLGKKWYPFKTSTDFTTAVGVNVNIATPLVPARLIIAMLDGSSS
TAVSTGRLYVSYTIQLIEPTALALNN
>gi|21686953|ref|NP_663298.1| coat protein [Turnip yellow mosaic virus]
MEIDKELAPQDRTVTVATVLPAVPGPSPLTIKQPFQSEVLFAGTKDAEASLTIANIDSVSTLTTFYRHASLESLWVTIHP
TLQAPAFPTTVGVCWVPANSPVTPAQITKTYGGQIFCIGGAINTLSPLIVKCPLEMMNPRVKDSIQYLDSPKLLISITAQ
PTAPPASTCIITVSGTLSMHSPLITDTST
>gi|22681118|ref|NP_689432.1| coat protein [Epinephelus tauvina nervous necrosis virus]
MVRKGEKKLAKPATTKAANPQPRRRANNRRRSNRTDAPVSKASTVTGFGRGTNDVHLSGMSRISQAVLPAGTGTDGYVVV
DATIVPDLLPRLGHAARIFQRYAVETLEFEIQPMCPANTGGGYVAGFLPDSTDNDHTFDALQATRGAVVAKWWESRTVRP
QYTRTLLWTSSGKEQRLTSPGRLILLCVGNNTDVVNVSVLCRWSVRLSVPSLETPEETTAPIMTQGSLYNDSLSTNDFKS
ILLGSTPLDIAPDGAVFQLDRPLSIDYILGTGDVDRAVYWHLKKFAGNAGTPAGWFRWGIWDNFNKTFTDGVAYYSDEQP
RQILLPVGTVCTRVDSGN
>gi|24323601|ref|NP_715629.1| coat protein [Subterranean clover mottle virus]
MTGRRVRRSKKKSGQETTTQQNRQRSGGKQSQNQMIQVKRERTPMASTVVIGRSFPAIHSEGTRTRVCHTELIRAVDINT
IFTLNFTWCIPSAFPWLSGVAVNWSKWRWVSLRFTYMPAAATTTQGTVALGYLYDALDAVPAALQQMSSLAGFSTGAVWS
GSEGSVLLRAANKNGNVPGAVSSQLNIADPSKYYRYENLTNFAAIAEGTKNLYAPARLAVAAANGAADVGGVGTVYATYV
VELIDPISSALNS
>gi|25140190|ref|NP_740759.1| coat protein [[NAME] virus]
MVYNITSSNQYQYFAAMWAEPTAMLNQCVSALSQSYQTQAARDTVRQQFSNLLSAIVTPNQRFPEAGYRVYINSAVLKPL
YESLMKSFDTRNRIIETEEESRPSASEVANATQRVDDATVAIRSQIQLLLNELSNGHGLMNRAEFEVLLPWATAPAT
>gi|39163636|ref|NP_945127.1| coat protein [Pelargonium flower break virus]
MDAYKNDPIVRQAVAKGVAWAAKLNTRGWSSLTTQQKKAARSALSVIQSPAVVVPRRTRVRNPVPAGLKSGNGKAGKSST
[NAME]
[NAME]
YVVALTQHGTLTTSSGPPYATLTTTATSTSMELNTHGKWLVVWVSADEVINSPVISGSGASGSVTVVSDAQTTVVAVVTA
NLPGAIISNTSTAAPSSLEWYVSRL
>gi|66478135|ref|YP_238481.1| coat protein [Pelargonium line pattern virus]
MAAKDNPAVIAAVARREQWAIKLQSKGWGSLSKAQKATARSYGIGNPPTVVVPRTTRLVAGNPTNARRARGEPGNAKMGT
TITKQEYMGELHSSSKIETYLLDPKNVRSFPQLSGLAIGYNKYKITDFKVRYSPKCSDSECGLTIAYSSDSSDPPPKNKF
NLFSMNHKYETAAHKPLLVTLPVSKETRFLRDKCTDDSKLVDSGAVHVLVDGSHEGRLGELFFELTIVFSEPTFCTHHSQ
VIKGLKESEGPEYVKVEPDKETVKLIFQAAGAYLISIVASKLERIGQLGASEGDKLVVESTDKSACLCRIEAEQPGSAVV
LVYASREAITLRAYINKL
>gi|89888604|ref|YP_512365.1| coat protein [Cucumber leaf spot virus]
MEIARTNKNSIVKYVPAAVGAAYQMGKSIVPYAPTIVDALGNVVSRATGRKKKNKGKGVQNQIVGGIGAIAAPVSITKRV
RGMRPSFKQTKGKVHIVHRELVTSVINLVGNFRVNNNVSAQIGQFRINPSNSSLFTWLPTIASNFDSYRFTSIRFVYVPL
CATTETGRVSLFWDKDSQDPLPVDRAALSSYGHSNEGPPWAETILNVPIDGKQRFVTDSNTTDRKLVDLGQFAFATYAGG
SNNQIGDIYVEYGVEFSEAQPAGGLTQYITKSVGATAFTTGPSYVVDANINVNATTANVEFFSPGTFLITAVVFGSTIAS
PSMAGGNGTLIGDRPVVGGSNASIWTCVFSTTGVSTSVPTFTQAGTGLTRVQYPITRVNSQTAYQV
>gi|94536600|ref|YP_588432.1| coat protein [Lisianthus necrosis virus]
MEIVRRNNNNAIAINKKQLASMAATAAAGALSNYVKNNGAMIVQGAVNMGKKAYGAVRNRRNKGNSQAMVHVGGMGGAMM
APVAVSRQLVGSKPKFAGRTAGSVTVTHREYLTQVNNSPAFTTNGGIVGNLLQLNPLNGTLFSWLPAIASNFDQYVFNSV
VLHYVPLCGTNEVGRVAMYWDKDSEDPEPVDRVELANFGILKETAPWAEAILRVPTDKTKRYCDDSTVVDRKLIDLGQLG
ISTYGGTGTNPVGDVFVSYSVTLYFPQPTNTLLSTRQLSLTGALEASTGPGYINVTRTPTLLTITFRSTGTFLLSGVFRD
TSVAVLGVAGGIGINSQTTLDVVGVATSFLVNCTVSTLPATLTYGSAGITSVTANCTRATRANTATLL
>gi|98960855|ref|YP_611157.1| coat protein [Redspotted grouper nervous necrosis virus]
MVRKGEKKLAKPATTKAANPQPRRRANNRRRSNRTDAPVSKASTVTGFGRGTNDVHLSGMSRISQAVLPAGTGTDGYVVV
DATIVPDLLPRLGHAARIFQRYAVETLEFEIQPMCPANTGGGYVAGFLPDPTDNDHTFDALQATRGAVVAKWWESRTVRP
QYTRTLLWTSSGKEQRLTSPGRLILLCVGNNTDVVNVSVLCRWSVRLSVPSLETPEETTAPIMTQGSLYNDSLSTNDFKS
ILLGSTPLDIAPDGAVFQLDRPLSIDYSLGTGDVDRAVYWHLKKFAGNAGTPAGWFRWGIWDNFNKTFADGVAYYSDEQP
RQILLPVGTVCTRVDSEN
>gi|113478396|ref|YP_720002.1| capsid protein VP1 [Murine norovirus 1]
MRMSDGAAPKANGSEASGQDLVPAAVEQAVPIQPVAGAALAAPAAGQINQIDPWIFQNFVQCPLGEFSISPRNTPGEILF
DLALGPGLNPYLAHLSAMYTGWVGNMEVQLVLAGNAFTAGKVVVALVPPYFPKGSLTTAQITCFPHVMCDVRTLEPIQLP
[NAME]
THARWPAPVYGLLVDPSLPSNPQWQNGRVHVDGTLLGTTPISGSWVSCFAAEAAYEFQSGTGEVATFTLIEQDGSAYVPG
DRAAPLGYPDFSGQLEIEVQTETTKTGDKLKVTTFEMILGPTTNADQAPYQGRVFASVTAAASLDLVDGRVRAVPRSIYG
FQDTIPEYNDGLLVPLAPPIGPFLPGEVLLRFRTYMRQIDTADAAAEAIDCALPQEFVSWFASNAFTVQSEALLLRYRNT
LTGQLLFECKLYNEGYIALSYSGSGPLTFPTDGIFEVVSWVPRLYQLASVGSLATGRMLKQ
>gi|126030121|ref|YP_001039960.1| nucleocapsid phosphoprotein [[NAME] bat coronavirus [NAME]]
MATPAAPRTISFADNNDNQPNQQQRGRGRNPKPRPAPNNTVSWYTGLTQHGKNPLAFPPGQGVPLNANSTTAQNAGYWRR
QDRKINTGNGVKQLAPRWFFYYTGTGPEANLPFRSVKDGIVWVYEEGATDAPSVFGTRNPANDAAIVCQFAPGTLIPKNF
HIEGTGGNSQSSSRASSNSRNSSRSSSRGGRSTSNSRGTSPVSHGVGSAESLAALPLLLDLQKRLADLESGKSKQPKVVT
KKDAAAAKNKMRHKRVATKGFNVTQAFGLRGPGPLQGNFGDMNYNKFGTEDPRWPQMAELAPSASAFMSMSQFKLTHQSN
DDKGDPIYFLSYSGAIKLDPKNPNYKKWLELLESNIDAYKTFPKKERKPKTTEDGAVASSSASQMEDVDAKPQRKPKSRV
AGSITMRSGSLPALQDVTFDSEA
>gi|126030131|ref|YP_001039969.1| nucleocapsid phosphoprotein [Pipistrellus bat coronavirus HKU5]
MATPAPPRAVVFANDNETPTNSQRSGRPRTKPRPAPNTTVSWFTGLTQHGKQPLAFPPGQGVPLNANSTPAQNAGYWRRQ
[NAME]
IEGTGGNSQSSSRASSRSSSRSSSRNGRSNNSSRNASPAPHGVGDVVGAGTLSVLLDLQKRLADLEAGKGNKQPKVITKK
DAQAAKQKMRHKRVATKGYNVVQAFGMRGPGPLQSNFGDMQYNKLGTEDPRWPQIAELAPSASAFMSTSQFKVTHQSNDE
NGEPVYFLSYSGAIKLDPKNPNYNKWMEILDANIDAYKSFPKKERKQKPSGDDAATAPATSQMEDVPELPPKQQRKKRVV
QGSIPQRSAGVPSFEDVVDAIFPDSEA
>gi|126030138|ref|YP_001039975.1| nucleocapsid phosphoprotein [Rousettus bat coronavirus HKU9]
MSGRNRSRSGTPSPKVTFKQESDGSDSESERRNGNRNGARPKNNNSRGSAPKPEKPKAAPPQNVSWFAPLVQTGKAELRF
PRGEGVPVSQGVDSTYEHGYWLRTQRSFQKGGKQVLANPRWYFYYTGTGRFGDLRFGTKNPDIVWVGQEGANINRLGDMG
TRNPSNDGAIPVQLAGGIPKGFYAEGRGSRGNSRSSSRNSSRASSRGNSRASSRGASPGRPAANPSTEPWMAYLVQKLER
LESQVSGTKPATKNPVQVTKNEAAANAKKLRHKRTAHKGSGVTVNYGRRGPGDLEGNFGDREMIKLGTDDPRFAAAAQMA
PNVSSFLFMSHLSTRDEDDALWLHYKGAIKLPKDDPNYEQWTKILAENLNAYKDFPPTEPKKDKKKKEETAQDTVIFEDA
STGTDQTVVKVWVKDQDAQTDDEWLGGDETVYEDEDDRPKTQRRHKKRGSTASRVTIADPTNAGAERS
>gi|156603885|ref|YP_001429589.1| coat protein [Potato Virus P]
MSTPEEKQRAEAAARDEAIKAEVARREVDRKGKKSDPVVPTSSGSESRVENEQSLLERRLSTLIERLNSERHNSNLQNVA
FEIGRPNLEPVPEMRRNPANPYGRFSIDELFKMKVRSVSNNMANTEQMAKIVSAISGLGVPTEQVTSVILKTVIMCASVS
SSVFLDPDGSIEYEGGAVPIDAIIAIMKNVGLRKVCRLYAPVVWNSMLVRNQPPSDWQAMGFPFNARFAAFDTFDYVTNP
AAIQPIEGLIRRPTPEECIAHNAHKRMALDKANRNERFANLETEYTGGLQGAEIVRNHRNANNA
>gi|160707873|ref|YP_001552240.1| nucleocapsid phosphoprotein [Rhinolophus bat coronavirus HKU2]
MATVNWGDAVEQAESRGRKRIPLSLFAPLRVTDGKNFWNVMPRNGVPTGRGNPDQQIGYWVEQKRWRMQKGQRKDQPSNW
HFYYLGTGPHADAPFRKRIQGVHWVAVDGAKTSPTGLGVRNRNKEPATPQFGFQLPADVTVVEATSRSASRSQSRSRNQS
QSRSGAQTPRVQQSSQAVDIVAAVKQALADLGIASSQSKSQSGKNTPKPRSRAVSPAPAPKPARKQMDKPEWKRVPNSEE
DVRKCFGPRSASRNFGDSDLVQHGVEAKHFPTIAELLPTQAALAFGSEITTKEAGDFVEVTYHYVMKVSKTDKNLPRFLE
QVAAYSKPSQIRRSQSQQDLNVDAPAFTPAPPATPVSRNPDFPEEEVEMVDEIIN
>gi|189313878|ref|YP_001941174.1| nucleocapsid protein [Turkey coronavirus]
MASGKATGKTDAPAPVIKLGGPKPPKVGSSGNASWFQSIKAKKLNTPQPKFEGSGVPDNENIKTSQQHGYWRRQARFKPG
[NAME]
HRGRSGRSTAASSAASSRAPSRDGSRGRRSGSEDDLIARAAKIIQDQQKKGSRITKAKADEMAHRRYCKRTVPPGYKVDQ
VFGPRTKGREGNFGDDKMNEEGIKDGRVTAMLNLVPSSHACLFGSKVTPKLQPDGLHLRFEFTTVVPRDDPQFANYVQIC
[NAME]
DSALGENEL
>gi|215481435|ref|YP_002332933.1| coat protein [Potato virus X]
MSAPASTTQATGSTTSTTTKTAGATPATASGLFTIPDGDFFSTARAIVASNAVATNEDLSKIEAIWKDMKVPTDTMAQAA
WDLVRHCADVGSSAQTEMIDTGPYSNGISRARLAAAIKEVCTLRQFCMKYAPVVWNWMLTNNSPPANWQAQGFKPEHKFA
AFDFFNGVTNPAAIMPKEGLIRPPSEAEMNAAQTAAFVKITKARAQSNDFASLDAAVTRGRITGTTTAEAVVTLPPP
>gi|217337298|ref|YP_002341563.1| coat protein [Schlumbergera virus X]
MSTTPSSASNSIGSRVPTAQGPFASLTSSQLNVLPLSVTSSLLPSPEDLVTISQAFITLGAAQTNLTQVSLELVNYCFDN
GSSPETVFKGNSATLGVPLSKVANAVTQYTTLRQFCRYFAKLIWNYRLEKNKPPAAWEAWAYKPEQKFAAFDFFDGVLNE
AALNPMDGLVRIPNEAERLANQTNRNVHLFESNAQKSRALTTSALVTKGLQGSESPKIQLLPSPE
>gi|18450256|ref|NP_569130.1| viral coat protein [Garlic virus A]
MNNPVDPSTSQQMSGTTGQVSQPRPNVNPFGQSQTRPLGNRDPQNNSNASDDSDALMPAVTDFETLTKDVESNSVASRLI
IRDILDMLQAKRQGATPKDLFSLAWTCYHNGSSRFVTLTTDAPCGMAHSELKDIVENSCTLRQFCGFYAKACYVAGKQQN
KPPANWSRKGYQEDSKFAAFDFFNAVLSDSSPSPPGGMRFKPTDAEILAHSMNAKMSIVESRRATNMVSTRADLLAQQQI
HEQPKPPMITF
>gi|18450249|ref|NP_569136.1| viral coat protein [Garlic virus C]
MSGDSLSDDLVNAAMTDPSTQGLNQATSAQGSRPGLVSGPGSQTPSKNPRPSSTQGGPTVTNELLPSESELEAVANDVTS
NSVATQSTIREILDLLRARKPSATPKDLFSLAWACYHNGSSRYTNLATDAPCGMSHAELKDLVEEFCTLRQFCGFYAKTC
YVTGRQQNKLPANWARKGFQDESKFAAFDFFNAVSSDSAPNPPGGMRFKPTQAEILGHSLNAKMSIIESRKATNMVSTRA
DVIAQQQIHEPPKPLMLTF
>gi|212681384|ref|YP_002308501.1| nucleocapsid phosphoprotein [Thrush coronavirus HKU12-600]
MSAPVVPTTDASWFQVLKAQNKKAIHPQFRGDGVPLNSAIKPQENHGYWLRYNRQKPGGAAIPPSYAFYYTGTGPRGNLK
FGEYPPNDSKDTSRITWVKAKGADTSIKPHVAKRNPNNPKHALLPLRFPSGDGPAAGFRVDPFNTRGRQLERAPGPRSMS
[NAME]
EMLFAGHVDSQFQVNDITLTFTYSITVKENSPDYIRIKDALSTVVNQTYEPPTKPKKEKKPVEQASKNNQQKKKPAKQET
AKPDNSADLEWDDAFEIKQDSSA
>gi|212681394|ref|YP_002308510.1| nucleocapsid phosphoprotein [Munia coronavirus HKU13-3514]
MATPAVPTTDASWFQVLKAQNKKAIHPQFKGNGVPVNSAIKPAENHGYWLRFARQKPGGAQIPPSYAFYYTGTGPRGNLK
YGEYPPNDSKETSRITWVKGPGADTTIKPHVAKRNPNNPKHQLLPLRFPPGDGPAAGFRVDPFNSRGRTMERGNGPRSQS
ANDRPVQNQPKRRDRSAPAAVRRKTQHQAPKRTLLKGKTISQVFGTRSKAGANVGSADSEKAGMADSRIMTLARFVPGVQ
ELLFAGHLDSNFQQDGALTLTFTYSITVKQDSPDYDRLKDALNTVVNQTYEAPTKPQKVKKPESEQSSKPKQPRKPKTKK
AAEADKAPEKDNSADPDQLEWDNAFEFKNSEA
>gi|166197722|ref|YP_001655014.1| coat protein [Phaius virus X]
MATTNTVSKFGPANMQAWMDLKYEPTSESLVSEGELLKIQEQWAAIGVTGDFFTVAFQVAMVCSDAHSGSQTVLPGMCNQ
HPNIPLSAIGGIIRNVTTLRRFCRYYAKFVWNYRVANALPPANWAELEFTEETKYAAFDFFDGVTNVAALDPPNGLVRNP
SEREFQASRINRYAAIARVASSGFTTTAAEVTKGRATAYQVHLLDAP
>gi|222509606|ref|YP_002574618.1| capsid protein [Helleborus net necrosis virus]
MPTEQEIEQQRRTAEAQQIERNRRSNTETQQQQRQATPPRRQQALDLEDEEQAVGLEKTLLDRFLKLKEFNLNNLTATRL
VNSGFETGRPKARVAASMRGDMANIFTSPTLDTLQALPWNPVSSRLATAEELAKISAKIEALGFPRDQLAKLFWDVSRYC
ASNSSSPYSDPKGVIEFDGGAITRDAALAVIRDISSLRRVCRSYSKIVWNYMLVNAQPPEDWQAKGFTENTKYAAFDFFD
SIMNSAAIQPAEGLIRKPTPEEIIANETHKRLALDRASSNRRFANYSAEVTGGKFGRELKRSYRGSESD
>gi|224808904|ref|YP_002640504.1| coat protein [Gayfeather mild mottle virus]
MAQSGTGGSSRRPRRGRRNNNNRNNDRDKALRDLTVQVKRLAIIAASTAPSLQHPTFIASQRCRPGYTYTSLDVRPTKTE
[NAME]
PNNKITFDMSNVDAEIGDMNRYALIVYSKDDVLEADEMVIHVDVEHQRIPSATSLPV
>gi|226309586|ref|YP_002776351.1| coat protein [African oil palm ringspot virus]
MADKTETPKAPAAAETSKTPAVTETKKVAEKPTGLSSDDRNKLRRRRARGNVGSTSLISSPTREQMXAIRIEPDLISMAS
EDQLNAIMADWASSCKXPGTQAFSNAFDIVMYCVHNGSSELTEIRGKTSSGADREQLVAVIKNYCTLRQFCSKYAAIAWN
YMIMNNEPPANWAKNQVTKNAKFAAFDFFDAVTSDCALQPAEGLVRMPSDIEHTAAATMKDMKLRRDELRRGTHTSNFTE
VTGGRAGPKVPLKTVGTTSDNSFGH
>gi|166851943|ref|YP_001661450.1| coat protein [Ligustrum necrotic ringspot virus]
MPPKEAPSQTEAPPAAPPPPPVTSVTTPPPRERREERGESSAEPGEEPQLELRFQRLIELLSGQRHNSNLKNMAFEIGRP
PLEPTPEMKRNPANPYGRFSIDELFRIKPKLVSNNMATTEQMAKIVSAIAGLGVPTEQVSAVILQTVIQCSSYSSSTFLN
PDGSVEFEGGAVPIDAIVAIMKRDSTLRKVCRLYAPVVWNYMLVKDQPPSDWQAMGFQWNTRFAAFDFFDYVENQAAVQP
VEGLIRRPTSAEKIAHATHRQLALDRSNRNEKFGSLEPEITGGLQGAEIVRNHRNAANGNA
>gi|194268062|ref|YP_002004565.1| capsid [Steller sea lion vesivirus]
MATTHTLLSFDDLEFLLHKKDLTDLYGERCGTLNLVINPYDLFLPDDLDDCWCDDPFNCCFTDVYASIGTEYSYIDPPEL
IHEEHRATNGTWPDGTPCEPILPPFTILGTHHYYATKPGEVVSGILSKLGSSWDPSLRSTANVEANFTFRAESDGPGNSD
IVTEEQGTVVQQQPAPAPAALATLATASTGKSVEQEWMTFFSYHTSINWSTVESQGKVLYSQALNPSINPYLDHIAKLYS
SWSGGIDVRFTVSGSGVFGGKLAALLVPPGVEPIESVSMLQYPHVLFDARQTEPVIFTIPDIRKTLFHNMDETDTTKLVI
MVYNELINPYENTVEGKTTCSITVETRPSADFCFALLKPPGSLIKHGSIPSDLIPRNSAHWLGNRWWSTISGFSVQPRVF
QSNRHFDFDSTTTGWSTPYYVPIEIEIEAKTGGDNYWFHVRDTEKALVPGLPDGWPDTTVPESTSASNGNFDYREGFHDT
[NAME]
VHATLSPLGFVMVDGQPIGSDSSKVVRIATLPEAFTQGGNYPIFYINKVKVGYFDKTTTDCYNSQILMTTQKLAEGNYNL
PPDSLAVYRITDSSSQWFDVGINRDGFSYVGLSDLPVLEFPLTSTFMGVQLARVKLASKVRVNRTSIK
>gi|194351533|ref|YP_002019753.1| capsid protein [Barfin flounder virus BF93Hok]
MVRKGNKKLAKPATTKAVNPQPRRRNNNRRRGMRADAPLAKASTITGFGRGTNDVHLTGMSRIAQAVIPAGTGTDGYIVV
DETIVPELLPRLGFAARIFQRYAVETLEFEIQPMCPANTGGGYVAGFLPDPTDSDHTFDAIQATRGAVVAKWWESRTIRP
QYARALLWTSVGKEQRLTSPGRLILLCVGNNTDVVNVSVLCRWSVRLSVPSLETPEDTFAPILTLGPLYNDSLAANDFKS
ILLGSTQLDIAPEGAVYSLDRPLSIDYSLGTGDVDRAVYWHVKKVAGNVGTPAGWFHWGLWDNFNKTFTQGVAYYSDAQP
RQILLPVGTLFTRADSGN
>gi|9626545|ref|NP_040838.1| nucleocapsid protein [Infectious bronchitis virus]
MASGKAAGKTDAPAPVIKLGGPKPPKVGSSGNASWFQAIKAKKLNTPPPKFEGSGVPDNENIKPSQQHGYWRRQARFKPG
KGGRKPVPDAWYFYYTGTGPAADLNWGDTQDGIVWVAAKGADTKSRSNQGTRDPDKFDQYPLRFSDGGPDGNFRWDFIPL
NRGRSGRSTAASSAAASRAPSREGSRGRRSDSGDDLIARAAKIIQDQQKKGSRITKAKADEMAHRRYCKRTIPPNYRVDQ
VFGPRTKGKEGNFGDDKMNEEGIKDGRVTAMLNLVPSSHACLFGSRVTPKLQLDGLHLRFEFTTVVPCDDPQFDNYVKIC
DQCVDGVGTRPKDDEPKPKSRSSSRPATRGNSPAPRQQRPKKEKKLKKQDDEADKALTSDEERNNAQLEFYDEPKVINWG
DAALGENEL
>gi|9629816|ref|NP_045302.1| nucleocapsid protein [Murine hepatitis virus strain A59]
MSFVPGQENAGGRSSSVNRAGNGILKKTTWADQTERGPNNQNRGRRNQPKQTATTQPNSGSVVPHYSWFSGITQFQKGKE
FQFAEGQGVPIANGIPASEQKGYWYRHNRRSFKTPDGQQKQLLPRWYFYYLGTGPHAGASYGDSIEGVFWVANSQADTNT
RSDIVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPASRSGSRSQSRGPNNRARSSSNQRQPASTVKPDMAEEIAAL
VLAKLGKDAGQPKQVTKQSAKEVRQKILNKPRQKRTPNKQCPVQQCFGKRGPNQNFGGSEMLKLGTSDPQFPILAELAPT
VGAFFFGSKLELVKKNSGGADEPTKDVYELQYSGAVRFDSTLPGFETIMKVLNENLNAYQKDGGADVVSPKPQRKGRRQA
QEKKDEVDNVSVAKPKSSVQRNVSRELTPEDRSLLAQILDDGVVPDGLEDDSNV
>gi|30146775|ref|NP_840015.1| coat protein P3 [Barley yellow dwarf virus-PAV]
MNSVGRRGPRRANQNGTRRRRRRTVRPVVVVQPNRAGPRRRNGRRKGRGGANFVFRPTGGTEVFVFSVDNLKANSSGAIK
FGPSLSQCPALSDGILKSYHRYKITSIRVEFKSHASANTAGAIFIELDTACKQSALGSYINSFTISKTASKTFRSEAING
KEFQESTIDQFWMLYKANGTTTDTAGQFIITMSVSLMTAK
>gi|13182723|ref|NP_077083.1| coat protein [Clover yellow mosaic virus]
MTDTKKTLFSAPTDEQLDTLTLTIESNLVPSISELEAIAKDWKTLGLQEADFTANAIKIAWFCYHSGSSESVQVQGNSTS
DKIPLYQLAGVVRQHSTLRRFCRYFAKVIWNYALRKNQPPANWASQNYKEADRFAAFDFFEGVSSSAALSPPGGLIREPS
PNERMANETNKNVHLYQTASRGSNLATTSTVATKGAYSTNASNAGFPYHRPE
>gi|19263363|ref|NP_597750.1| Coat protein [Tobacco mosaic virus]
MSYSITTPSQFVFLSSAWADPIELINLCTNALGNQFQTQQARTVVQRQFSEVWKPSPQVTVRFPDSDFKVYRYNAVLDPL
VTALLGAFDTRNRIIEVENQANPTTAETLDATRRVDDATVAIRSAINNLIVELIRGTGSYNRSSFESSSGLVWTSGPAT
>gi|20043272|ref|NP_612812.1| Coat protein [[NAME] scorch virus]
MPPKEAPAQSSEGNIVAKEAGEVPPRVAPAAPHVPPQAPPLQPIIQPAGAVAANLVPENQLEQRLMNLIEVLKPQRHNSS
LKNVAFEIGRPALEPVPTMRRNPANPYGRFSIDELYKMDVQVVSNNMATTEQMAKISSAIAGLGVPTEQVADVILKMVVM
CASVSSSVYLDPDGSIEFDGGAVPVDSIAAIMKKEAGLRKVCRLYAPVVWNLMLVKNQPPSDWQAMGYPKEARFAAFDTF
DYVTNGAAIQPVEGLIRGPTPAECIAHNAHKRHALDRSNRNEKYGNLETEYTGGLQGAEIVRNHRNAGNGSA
>gi|15426268|ref|NP_203552.1| capsid protein [Simian hemorrhagic fever virus]
MAGKPKTNNKGKSQSRGGNRLPQRPRRSTQQRRAAPVHKPLNETHYVFAEPGDLRVVLPGPTSAHIKQLLIRYYDNGGGN
LSYDGQRINFAAIITPPHNMLKQLAKVTSST
>gi|21427642|ref|NP_659022.1| capsid protein [Sorghum chlorotic spot virus]
MAVEAGYDTWNAEINRIAVRHAFIRYNTLLATVQDWTKTRTSLVAHVGTVLAALSTLGTRDFFSRKKRFAFAEADGDIIF
CDLSDEGTQQAMNRLKTVLMAVKGEGLKARNAGRASGTGTQAQETEDTSGNDTALAIANALVEFQTHIDSDLFLKNHCFT
[NAME]
>gi|19881392|ref|NP_612216.1| coat protein [Beet mild yellowing virus]
MNTVVGRRTINGRRRPRRQTRRAQRSQPVVVVQASRTTQRRPRRRRRGNNRTRRTVSTRGTGSSETFVFSKDNLAGSSSG
AITFGPSLSDCPAFADGMLKAYHEYKISMVILEFVSEASSQNSGSIAYELDPHCKLSALSSTINKFGITKPGRRAFAASY
INGADWHDVAKDQFRILYKGNGSSSIAGSFRITMKCQFHNPK
>gi|9629190|ref|NP_044388.1| capsid protein [Saguaro cactus virus]
MDAKYGKDPRLAAAAATGAAWAVRFLNRGWASLSPKQKRTARSVLGLQNQPDVIVPVRPRATARVARPTRQGPGLAGKSM
TITKCEYLSDIVSHVGTIPLTDHWVVNPGTIKTFPQTSLMASQFNKYRLTALRVRYTSTCSFETSGRVAIAFTNDSNDPL
PTTKSQLYNFPVHIEAAATESKVLTIPCDNVYRFVRDDGVSDPKLVDFGRIVVCTYGSSAADPATLGELFIEYTIVFSDP
TYTSSLTQQGENQRSIGPRYATVDYESTRWECQLQAAGRWLVCWVSDSAIPSPSIVGVGAKGKVLTSSDSKCGIATVIAQ
APYCSIVSTTVSAPSSLTWFVARL
>gi|9635793|ref|NP_062430.1| coat protein [[NAME] mottle leaf virus]
MSARLNLTNKIHTELIAFLSQANRPLHQRSEPEKKLILRSIFANIAIQGTSDSTEFISTTVQVMRPTGAEALVSYNPRTI
VGLIKLFASTNEDENISRSTFRQICEHFAEYAKNGLIALKLLREYTNLYRKAPSLGGKYPELCFDFNGGLDMIDLNNEQR
KVITNFNQRLLQTEIAKGEAEANMSAVSTNLCV
>gi|20153356|ref|NP_619697.1| coat protein [Lettuce infectious yellows virus]
MDTDGDNDVFGSGNDTRNNDDKKKEEMKQNISDNSQIISTRDHEADIIGSISKEDLSKIVVRVDRHDALSANDVQSFREA
MINFMRDKDPNRNQPSDKLIIAMEVGVYQMVINLGTSAKLGNANNLEFTIAYDQETRTYKVADFVNYMQSRMRNSPNVVR
QYARAMEKTINNIRSAGIINSNGVLAAKHGVLASYRNSYSDFAVGFGNDTTDAQLTSLMLARKQALCKGEGGSVEHYNTM
QLANLKHPC
>gi|20153357|ref|NP_619698.1| duplicated coat protein [Lettuce infectious yellows virus]
MLEAECDEVELTSRDVGDYLMFKTRITDNFTGDLTLNINTSNLIKFKTCSFFICYGDDKDRYELGWTSTSTSRSIFQHYK
DGKYIRDFRIQDPFPILSGSTFPVVISKIIANRVAFRMSRRLNNVIVDKLKNNIIEFLFVVYLDVDTGKIKPNTILKNLD
[NAME]
VPPVDNGKPDISKPGEKQGDIDIASKFNNIVMAKLKAQSSSDPLTKKQCDQLMLSLIKWFEKFGITKDNARLLIFQFGIS
FSTSKENLNNITNNIVVENDKGGFVKILKIDYLNKLYGSIPESHTHNLERVLLRHYAQEILILLRSKVLEWPRKLARNKG
IFEQYAYMACDFFDTAELELTEAETTALTTVKSWTMNHYKKKRQIVNSSQLE
>gi|20177490|ref|NP_619773.1| coat protein [Pelargonium zonate spot virus]
MPPKRQNTETRKARQNRARRSRQQALAKLAREFSGLSMSVERSPSTSWADITESESRLKLIPGFTATEVTFDPSLTFGTH
TGFATAERSLTVPDALLESPNLRLNRVAVVVLLDPTVPEAHKFWCALGDRWVAPSVGSFPSNAVRITGREGKGHVIYHYP
GKTVEHLAKLRVYLFATDYAIVGNNSPVATVKIFVEHEKIGQAEYIPL
>gi|9629164|ref|NP_056749.1| coat protein [Potato leafroll virus]
MSTVVVKGNVNGGVQQPRMRRRQSLRRRANRVQPVVMVTAPGQPRRRRRRRGGNRRSRRTGVPRGRGSSETFVFTKDNLV
GNTQGSFTFGPSLSDCPAFKDGILKAYHEYKITSILLQFVSEASSTSSGSIAYELDPHCKVSSLQSYVNKFQITKGGAKT
YQARMINGVEWHDSSEDQCRILWKGNGKSSDSAGSFRVTIKVALQNPK
>gi|224923885|ref|YP_002647025.1| coat protein [Red clover vein mosaic virus]
MSETAEQKALREAKGKMDVNTGGSDVLEFIKDEEKLQENLLKRFQKLKELKVKSLSSSVVFNGGWEDGRVRLPVSDKMKV
DPSNVFSSPTLDDLQKLGWRAESNACATAEELGKISAQLEALGVPKEKMAAAFWDIARYCTSVGSSPFVNPKGTIDFPNG
SITRDAAFAVIKKFSSLRQVCRSFAPITWNYMHITNQPPEDWAKKRLKYDDRFAAFDPFDFVESPAAIQPAEGLVVRPTP
ENYVAFFTHKRLALANSDRSKRFANNSSGVSGGMFGCDNKVNFPNRPC
>gi|261041623|ref|YP_003208110.1| coat protein [Melandrium yellow fleck virus]
MSTPGTVKMTRAQRRAAARRAAKPQINKRIQPVIVEPPTSGLGRAIKALGGHTITKWETSCPEIKAKSSIQITIPLPSEL
SSERNKVLKVGRVLLWLGLLPSINGQVKACVTQTNPVPGAAFQSALAIADSSKEVVSAMYVDIFKGITIEDFVNDLAIYV
YSAVDVAAKDIIVHLEVEHVRPVLDDYFTPLH
>gi|85718598|ref|YP_459964.1| coat protein [Angelonia flower break virus]
MSNLRNDPRVAKLAAQGSAWAKRLMNNGWGGLRPNQKAAARQALGILPAPVATPVTTTRLVNGNPTNQRRKRNQPGNLRT
DTPVTSTEFFADVLLHTGEDANIRSWVINPREVSLFPRLSIQSALYDKYRISSLRVRFASSCSFEVNGKIMLGFIGDSSD
EVPVTKIDVHSLTKTAECTAMQNIIFNVGGDNITRFLGDRASDDPKLVNFGRIVLCTYGFDSNAPSIVGELSVEYTITLL
NPSPVASLSQRWISGSSKGIGFVEYTHDVATKTYQFDFQTGGRYCLIVATDKGVFGSPLVTGSVQTQSRVVTDGTATLMT
VSVDMKAPNGTISWIPPTDQGALTEWIVTRV
>gi|262396907|ref|YP_003288758.1| coat protein [Barfin flounder nervous necrosis virus]
MVRKGNKKLAKPATTKAVNPQPRRRNNNRRRGMRADAPLAKASTITGFGRGTNDVHLTGMSRIAQAVIPAGTGTDGYIVV
DETIVPELLPRLGFAARIFQRYAVETLEFEIQPMCPANTGGGYVAGFLPDPTDSDHTFDAIQATRGAVVAKWWESRTIRP
QYARALLWTSVGKEQRLTSPGRLILLCVGNNTDVVNVSVLCRWSVRLSVPSLETPEDTFAPILTLGPLYNDSLAANDFKS
ILLGSTQLDIAPEGAVYSLDRPLSIDYSLGTGDVDRAVYWHVKKVAGNVGTPAGWFHWGLWDNFNKTFTQGVAYYSDAQP
RQILLPVGTLFTRADSGN
>gi|216905812|ref|YP_002333479.1| coat protein [Soybean yellow mottle [NAME]]
MNGKMLTIAQLAKKEKTEGRRALSKNQRKRLDSADTRPLKEVSSTARVSTRRVPAAISSNVSNGVPNYAVRQNKPVIQHT
ELWGTLMSNSTESPAYIARTLNPSDPATFNWVQPLSTGYDMYRLINCEIIYTPRCATTTTGSIVLAHDPDASDANPDNVT
DLLNMAGAVSGSVFSPLRIKPNIKQLDRYVRDNSTSDPKLVDAGKILVAAYGQQASTTPFALGEVRFSYTLQLLNPQPHS
TMVQRLGAAPPPGVGPTYATLRTVNGATTSSNVLTFSTAGAYLITAVDATAGLGTPVTTDFGRFRVQGTSAADSPLLMFG
TALKSGATITFNGPVSNVLDVYVVRDSGVSDNSS
>gi|211998870|ref|YP_002302561.1| coat protein [Potato latent virus]
MDQKGKQSESSSQAVAPVPKPPLPPPIRGEEAVNEGNEEAKMERRLALLHQRLKGERNGTRITNPSFEIGRPSLTRPDDM
RRDPANIFSRLSIDDLAQIKPTPVSNNMANSEEMVKIAVAVEGLGVPTEQVANVVLQAVIYCASASSSVYLDPHGTIEYT
GGAVVRDSVVAIIKRDAGLRRVCRLFAPLVWNHMLVHNSPPSDWAAMGFQWNDRFAAFDFFDYVENEAAIQPLDGLIRRP
TRSEKIAHNTHKRLALDKSNRDEVFASLETEITGGKRGPEISRNFRNAAN
>gi|9790331|ref|NP_062899.1| p41 capsid protein [Tomato bushy stunt virus]
MAMVKRNNNTGMIPVSTKQLLALGAAAGATALQGFVKNNGMAIVEGAVDLTKRAYKAVRRRGGKKQQMINHVGGTGGAIM
APVAVTRQLVGSKPKFTGRTSGSVTVTHREYLSQVNNSTGFQVNGGIVGNLLQLNPLNGTLFSWLPAIASNFDQYTFNSV
VLHYVPLCSTTEVGRVAIYFDKDSEDPEPADRVELANYSVLKETAPWAEAMLRVPTDKIKRFCDDSSTSDHKLIDLGQLG
IATYGGAGTNAVGDIFISYSVTLYFPQPTNTLLSTRRLDLAGALVTASGPGYLLVSRTATVLTMTFRATGTFVISGTYRC
LTATTLGLAGGVNVNSITVVDNIGTDSAFFINCTVSNLPSVVTFTSTGITSATVHCVRATRQNDVSLI
>gi|9629934|ref|NP_046154.1| coat protein [Turnip vein-clearing virus]
MSYNITNPNQYQYFAAVWAEPIPMLNQCMSALSQSYQTQAARDTVRQQFSNLLSAVVTPSQRFPDTGSRVYVNSAVIKPL
YEALMKSFDTRNRIIETEEESRPSASEVANATQRVDDATVAIRSQIQLLLSELSNGHGYMNRAEFEALLPWTTAPAT
>gi|9635570|ref|NP_059942.1| capsid protein [Cherry necrotic rusty mottle virus]
MADEYELNDDGTFKLDAANNKIPKKKTTGPTPPLPRNEESPSRKSDIEILRSRRRRINFDPKNPTSSPSREFISNIQEKD
PTTLNIASDDTVKAIAADWVEHLKVPESETFNCIFDVVWYCYHNSSSDKTKFVGRAKCNVELEELASTIRSYCSLRSFCS
KYAPVIWDFAISNDIPPANWQRRKVIEGAKFAAFDFFEAVTSAAALQPVAGLIRNPTDKEMIAGASLKEISLMRDEIRRG
TSSTLMTEVTGGRTGQVQPIKRIGGDE
>gi|11125724|ref|NP_068550.1| coat protein [Botrytis virus F]
MTTSRFATFDIESETGLTPGAYPAPLPTLEQQLHDRNAILAAIPSLARAKLDAATLKRRFANFLLTLGMVGTTSKGSYEE
LIIPPVKGMGSSTGFRARELVQIITSSPAPPGFDGNQTLRQFARPYAPQVQNMIAQGKFKTNLYDKYGKSVGAPPHVCID
FNDAMDLQMFHSTAEFESAHKVRELAIAEASARENAPRPAANPRAAKPIIGQTAPAFHSGDAAKQSGGQPVNIKPSLAQS
AGFDSHRPPPETPPRAGTPSSQKSGQSGQTTIQPPASHGILSGMLGSHKSTPHSSPQQTPKK
>gi|12018230|ref|NP_072164.1| coat protein [Cucumber fruit mottle [NAME]]
MSYSTSGLRSLPAYTKSFCPYYALYDLLVSAQGGALQTQNGKDILRDSINGLLTTVASPRSRFPAEGFFVWSRESRIAAI
LDSLLSALDSRNRAIEVENPSNPSTSEALNATKRNDDASTAAHNDIPQLISALNDGAGVFDRASFESQFGLVWTAASSST
SK
>gi|15426411|ref|NP_203557.1| capsid protein CP [Indian citrus ringspot virus]
MSFDYTDPTFRNYPFPHYCDFDRHQHCDHDLRTNPPPTEPPSRKSKLMSTSENKGKQPLHPPPTEGFPKPPPPPSSTPTT
PTPPDQTKAPEPIEKRIIHAFHAEPKTHTNGEAPPAFNPNNMNAVPLNLLNINLKYSPVTNSIANPKQTEAIGKAWVRIL
QIDPANVFLYAIDLARACADAGSSPEADIIGANEDLNPVVERNALAGVVRDFCPLRAFCAYYSRVVWNLMIKADQPPANW
MKSGIDEGAKFAAFDFFHGVLSPASLYVPLERHPTAAERIANQAMFAVKIANAPGNGSELTMDHVAFTKGRITADSKPRP
TPFNT
>gi|30018249|ref|NP_835241.1| coat protein CP [Pear latent virus]
MEIVRRNNNSAIAINKKQLATMAATAAAGALSNYVKNNGAMVVQGAVNMGKKAYGAVRNRKNKGNSQAMVHVGGMGGAMM
[NAME]
VLHYVPLCGTNEVGRVAMYWDKDSEDPEPADRVELANFGILKETAPWAEAILRVPTDKMKRYCDDSTVVDRKLIDLGQLG
ISTYGGTGTNPVGDVFVSYSVTLYFPQPTNTLLSTRQLSLTGALEASTGPGYINVTRTPTLLTITFRSTGTFLLSGVFRD
TGVAVLGVTGGIGINSQTTLDVVGVATSFLVNCTVSTLPATLTYGSAGITSVTANCTRATRANTVTLL
>gi|29366748|ref|NP_813792.1| coat protein P3 [Barley yellow dwarf virus-GAV]
MNSVGRRNNRRRNGPRRARRAGAVRRMVVVQPNRAGPKRRTRRRTRGGGANLISGPAGRTEVFVFSVNDLKANSSGTIKF
GPDLSQCPALSGGILKSYHRYKITNVKVEFKSHASASTVGAMFIELDTSCSQSTLGSYINSFTLSKSATKNFTAQQIDGK
EFRESSVNQFYMLYKANGSTSDTAGQFIITIRVANMTPK
>gi|30018255|ref|NP_835255.1| coat protein [Cucumber Bulgarian latent virus]
MALVLRKAGNIVPYVGPAAKAGATAVYNNRKIIYDGLNWIYAKVSKRVKKKNGIMSNVVGASPGSIVAPVATSRQLRASR
PKFMRTRGGVNITHREYVTQVNGVNGGTFQLNRTFGPGAYRVNPTNAAVFPWLLNIASNFDKYKFTRLSFHYVPMCATTE
VGRVGLFFDRDSEDSGPFDRSEVANMAHLAETPPWGEVVLQVPCDSIDRFISDSTVTDTKLIDLGRFGYVVYGGSTNNAY
GDVFVQYTVELREPQPSSNTMEEITGNAGNSVVTTPPSYFRLASFDATLAAFTPTTAGTYLVTLILEGTAMTAGNISTSN
PSALTITGQSVVVSATKVIYVCQVIASTPGHNLNFNFTAASATFWNFFAVRTTRDIIISA
>gi|37595818|ref|NP_932309.1| coat protein [Botrytis virus X]
MDPNLDQDTLPTHEEIDNDVDSAEEEPPEPPLLPDDIDDDDSHGSRTRRQVKPPPELLRAVGACLISGHYDGGNYFRWQQ
SIAALYAKAGYAGDIRFHQAAIQEYALDPVLPAPRVSYDLLVAHAGLRYQALLNEQLRTGKTPPADEALKDAVRKAAQAA
YDNAVKTGDYTPLIDIAFKGVDINKHASDVAQLAKMSVTMDGTHIKFTAGEMPKDKVITSNSMASPNTVMNILNLITTSA
NVTAVTCGIEFAIACAHQGSSRYTRHTGTSTGGSTFELIAAHVKEHCTIRQFCSYFAKVVWNHLLTHATPPVNWAKHGFT
LDSRYAAFDFFDAVTNAAALPPKNGLIRAPTSEEIRAHNLNAHLLINASRQDDQVSSSAQYTAAIAQAGGFKRPQIGWGE
>gi|41057350|ref|NP_958175.1| viral coat protein [Poplar mosaic virus]
MSGEQTEQISKDQAAAAEQARKEQIAEGKKAAESSEAERRKKNIAEIAKLNEKAREAKKQATEQEETTASLLERFNLLKE
WHLNQQVNNKVKNPAMESETEPALADELKPDMSNLFARPTVTDLQKMKWNAESNKMATADDMAFIEAEFQSLGVPKENLA
KVMWTLTRYCVGASSSQYLDPKGEEKLCGGVTRAALIASIKKRSTLSVKCADFMRPSCGITCWSTTFLQKIGSPRATLSE
TKFAAFDTFDFVMNPDPAIQPLEGLIRSPTKAEIIANETHKRIALDRNANNERFANLGSEITGGKFGCRVGTKWRESKCD
NG
>gi|50428559|ref|YP_054406.1| coat protein [Zygocactus virus X]
MSNTAGVQSSQTSGVRAPATPSPFQTLTAAQLAALTLGVTSSLLPSPEELVQLSNALTALGASSSNVSQVALEVVNYCFD
NGSSPETVFKGNSNLLQIPLSKVAQAITQVTTLRQFCRYFAKLIWNYRVSRNLPPAAWEAWAYKPEQKFAAFDFFDGVLN
EAALQPTDGLVRLPNEAERLANQTNRNVHLFESNAQKSRVLTTSALVTKGLQGSETPRIQFLPGPE
>gi|50428565|ref|YP_054411.1| coat protein [[NAME] virus X]
MASTPQTSSTPVQSSAARNPINNHGGPFDSLTTDQINSLSLTVTSSLLPSTQALQAIANAFTSLGASQAQVTNLALELVN
YCYDNGSSPETLFRGNSSIGVPFSKLASIISEHATFRQFARYFAPLIWNARISLNKPPAAWEAWHYNEEERFAAFDFFDG
VLNSAALMPKDGLIRKPTRAEINASQTNRNVHLFENKAQKSRYLSNSALVTKGIADSEGPRVQFLPGPE
>gi|50428572|ref|YP_054425.1| coat protein [Humulus japonicus latent virus]
MSNAFCASCGLRSHVGNCPPRRKASPGQKNRTRIYALERKRANVRVPPGTTLNPKFFAQFSGYNAEECDLLDDVINAIPS
VSVSAASQKRVTEAQLVVGDPLKGIQGPCTHMGDATITARTGGVRGFYMALDALLTGIPDATRLKSLVMHITFLSDGGVL
GLNTERSDQYVEPNPLKRKRFEKESPFWAQILFPDNVKLSDVKNYAIMIKFDSDYSANTPLYTRECWVNHYQLPSAVIPE
EAFARK
>gi|77118353|ref|YP_337910.1| nucleocapsid phosphoprotein [[NAME] virus]
MNSMLNPNAVPFQPSPQVVAIPMQYPSGFPPGFRRQRNPGFRPMFNRRRNNNGNQNRGRQNRQRVQNNNRGNIGNRQNNG
QRGSRRQYNQASPNVPFEQQLLMMANETAYAATYPPEMQNVAPTKLVKIAKRAAMQIVSGHATVEISNGTEDSNKRVATF
TIKVVMN
>gi|51980899|ref|YP_077189.1| coat protein [[NAME] red leaf virus]
MATYGLTKRATGIKPMVVVNTPSRRPRRRTRTKPIVVVQTARTGRRRRRRRGRGSGNPRTMGGSGGGISSQKFVFSKDNI
AGSSGGVLTFGKDLSDHPAFSNGLLKAFHQYKITNMRVRYISEAPSTAGGSISYELDPSCELDKLSSTIYKFGVLKNGQA
SWSAEKINGKEWHSSSENQFRFLWKGNGSNSTVGSFEIHYTCLFQNPK
>gi|62327386|ref|YP_224020.1| coat protein [Olive mild [NAME]]
MPKRGRVGLAESFQGKTKQQKRAEYEAVKREQLERAFANNSKVANPRSSGLSFRPLVAPIAGSVVYSRPRVPQIRTNQMS
TIVVNTELVANITLAAAGAFSFTAQPLIPSFGSWLANIADLYSKWRWIRCSVIYIPKCPTTTQGSVVMAIVYDAQDTVPT
TRTQVSQCYQSITFPPYAGYGGASALNSNSSGGESLVSTLDTNRVDKKWYSTIGNAAFTALTSIDKNQFCPATALIAGDG
GPVAATAVGDVFMRYEIEFIEPINPTINV
>gi|20564144|ref|NP_620723.1| coat protein [Turnip crinkle virus]
MENDPRVRKFASDGAQWAIKWQKKGWSTLTSRQKQTARAAMGIKLSPVAQPVQKVTRLSAPVALAYREVSTQPRVSTARD
GITRSGSELITTLKKNTDTEPKYTTAVLNPSEPGTFNQLIKEAAQYEKYRFTSLRFRYSPMSPSTTGGKVALAFDRDAAK
PPPNDLASLYNIEGCVSSVPWTGFILTVPTDSTDRFVADGISDPKLVDFGKLIMATYGQGANDAAQLGEVRVEYTVQLKN
RTGSTSDAQIGQFAGVKDGPRLVSWSKTKGTAGWEHDCHFLGTGNFSLTLFYEKAPVSGLENADASDFSVLGEAAAGSVQ
WAGVKVAERGQGVKMVTTEEQPKGKLQALRI
>gi|62327438|ref|YP_224138.1| coat protein [Mint virus X]
MTNPTDDAAAAAAAAAASAAKGKETALDSLGPPDPQFLKDFSYVVATDSVATRGMVEAIRGKWERLGVPAASFFGAALQL
ALACSDSHASSLTVLVGECAAAPSVGLRDLAASVKTICQLRHFCRFYAKFVWNYRVTHDLPPASWAAQGFPFEARFAAFD
FFDGVTNSAALEPAQGLIRPPTEIELKAAHTGKFVALATSGTSSLTLSNHAAVTHGRAETARPTILPP
>gi|72398341|ref|YP_293703.1| coat protein [Tomato chlorosis virus]
MENSAVANTGDNGGGRNPLVRPLDDGVDDEVQNLGRRDDSTSLIPANPNRSSSWALLNPDTINYNELRKLKVHSTRGDTL
TLTQEEEFEKILESFCRRIIGETPMTDKIFAGFYMSMCQAIVNQGTSVKAAGNNSLENYFEVDGARFKWKTPDLINEVRP
KMSDVPNAIRRYARSHEKIIQDFINSGLIKPDYHLQFKHGVLPSHVFGTGDYINGSLMNISDDQLISNLLMKRNALCKGN
[NAME]
>gi|77118928|ref|YP_337917.1| major capsid protein [Grapevine leafroll-associated virus 2]
MELMSDDNLGNLVITDASSLNGVDKKLLSAEIIKMLVQKGAPNDGIEVVFGLLLYALAARTTSPKVQRADSDVIFSNRFG
ESNVVVTEGDLKKVLDGCAPLTRFTNKLRTFGRTFTEAYVDFCIAYKHKLPQLNAAAELGIPAEDSYLAADFLGTCPKLS
ELQQSRKMFASMYALKTEGGVVNTPVSNLRQLGRREVM
>gi|85718623|ref|YP_459957.1| nucleocapsid protein [Porcine hemagglutinating encephalomyelitis virus]
MSFTPGKQPSSRASSGNRSGNGILKWADQSDQSRNVQTRGRRVQSKQTATSQQPSGGTVVPYYSWFSGITQFQKGKEFEF
AEGQGVPIAPGVPATEAKGYWYRHNRRSFKTADGNQRQLLPRWYFYYLGTGPYAKDHYGTDIDGVFWVASNQADVNTPAD
IVDRDPSSDEAIPTRFPPGTVLPQGYYIEGSGRSVPNSRSTSRASNRAPSSGSRSRANSGNRTSTSGVTPDMADQIASLV
[NAME]
GAFFFGSRLELAKVQNSSGNLDEPQKDVYELRYNGAIRFDSTLSGFETIMKVLNQNLNAYQHQEDGMINISPKPQRQRGQ
KNGQVENDNVSVAVPKSRVQQNKSRELTAEDISLLKKMDEPYTEDTSEI
>gi|269954643|ref|YP_003324585.1| coat protein [[NAME] mosaic virus]
MGDPIPDLKGKATTPPPVPNKQDKASDGTSGSGGVPPSNTAGAQKRHTGVNDVNFSELQNSAAESQKLMDRFSKLKDVNM
KNLSAGGVKNGGFETGRPSPKILDALKGDTSNAFTRPSLDALQMLNIKPESNRMATAEEIAAISAKLEGMGLPPEHTAPL
FWAIARYCADTSSSPYSDPKGSFEFPGGAMTRDAVFAIIRDHTTLRQFCRSFAPITWNQMLFNKSPPEGWQRLGYDETTK
FAAFDVFDFVTNKAAIQPLEGLLRMPTKEEHIAHETQKRISLDANRRNARFSNNSSLVTGGMFGKDVQTKFNGSNNSD
>gi|187251967|ref|YP_001876448.1| nucleocapsid protein [Beluga Whale coronavirus SW1]
MASTSGKGKNPADKSVKFQAPKVGRQAPALPTSGNVSWFQAIKGRKAGEEGITFKGPGVPVNENVSKNQNHGYWIQRSRT
TPGGKKLAPLYYFYYTGTGPRDQAKYGQEIPYVTWVKGDGAKTSQLSEAGSRDVNKFPNAFPLIFPTGDGPERGFFIERS
RSRSRSNSQADNRSKSRERSQSSDKPRKEDRGRSKSPAQKNPGSGGKITKEKAALMVSRAYSKRTLPPNKPVDQVFGSRD
TEKNFGDAEMIKKGMSDPRFTAALIPTPGPQAALFGSHVTLKEKPDGLEITYKYRTLFPKTDERYEEVKHAYLSNVPLQD
GGQPLHSSGVQKKLKSRSKSRDRTDDGVENPTTVNLDWSSEPVEGFLDDGTGDLEWSEA
>gi|82524284|ref|YP_406376.1| coat protein [[NAME] mottle virus]
MDESKIVTVKQPSISAPGFTLSAPEGEQAGSIRQIFQFEATSVGVVETLAQVSLSASESLAKLTAGYRRAKLVELFLTIT
PTQLAIDNPVTVDVVWVPANSTATPSKILSVYGGQRFLIGGTLTTSQVIRVPCNLQSVNAMIKDSTIYTDSPKLLVYSPV
AKGSPKTPSATVQIAGQILLSAPLLQAL
>gi|254667445|ref|YP_003075960.1| 5' extended coat protein [Kalanchoe latent virus]
MPAQHVVVSTKHLDFIAKLLVDLMDDGKYVVGSLHDNHYGGVSENYGLPFERRTYKSFESPEGATSAPLGLQAGNRYTLH
LDIMAPKPDPEVAGSTSQLGANQAAVVGTVGPSREKMLEDRLTNLIETLNKDMHNSNLKNIAFEIGRPVLEPTAQMKRNP
ANPYGRFSIDELFKMKIDVVSNNMATTEQMAKITADITGLGVPSEQVAEVILKMVIMCASVSSSAFLDPDGSVEFSSGAV
PVDSIAAIMKKHAGLRKVCRLYAPIVWNSMLVRNQPPSDWQAMGFPFNARFAAFDTFDYVTNAAAIQPVEGIIRRPTSEE
VIAHNAHKRLALDRANRNDRLGNLETEYTGGIQGAGITRNHRNANNG
>gi|254667446|ref|YP_003075962.1| coat protein [Kalanchoe latent virus]
MAPKPDPEVAGSTSQLGANQAAVVGTVGPSREKMLEDRLTNLIETLNKDMHNSNLKNIAFEIGRPVLEPTAQMKRNPANP
YGRFSIDELFKMKIDVVSNNMATTEQMAKITADITGLGVPSEQVAEVILKMVIMCASVSSSAFLDPDGSVEFSSGAVPVD
SIAAIMKKHAGLRKVCRLYAPIVWNSMLVRNQPPSDWQAMGFPFNARFAAFDTFDYVTNAAAIQPVEGIIRRPTSEEVIA
HNAHKRLALDRANRNDRLGNLETEYTGGIQGAGITRNHRNANNG
>gi|48696547|ref|YP_025089.1| coat protein [[NAME] pallidosis-associated virus]
MAETTGDAPVINAETAPPRDQEVRNRSNEEFDEGFFSRAFNSVSKRDDVANDSHSDPNTFSDIKVTADRGDTLNEEQNKK
YEVKLKEYCQTITKVDVDEKTFLAFYCSLIKMAKNQSTSIRNNNNPHLTNSFSVADKTFSYKTKDFLTFMAPHFTGVNNP
LRRYMRKNEGRIKTISAAAGIDSDGHLAAKHGTTSQFWGATSDFTNGCETNISDDDLAANYMQREAATKNKARSRTIFNV
SQLAGNVQ
>gi|14602404|ref|NP_148784.1| coat protein [Cactus virus X]
MSTTGVQSSQSSGPRSTPQSGPFQTLSSSQLAALSLGVTSSLLPSPAELVSISQALTTLGASATNLTPLSLEIVNYCFDN
GSSPETVFKGDSTVLQMPSPKSPCHHPITTLRQFCRYFAKIIWNYRVSKNLPPAAWEAWAYKPEQKFAAFDFFDGVLNEA
ALNPIDGLVRVPNEAERLANQTNRNVHLFESNAQKNRALTTSALVTKGLQGSESPRIQFLPGPE
>gi|20889403|ref|NP_624317.1| coat protein [Sugarcane striate mosaic-associated virus]
MSGPPPSTGANASSGAQPTTQQETSTVFKKSRRGSKSKFVSAVTKEQVRRVVELDIETDKIARDEDLEKVKAAWLAINVP
SDKIFEVSLEITLSCAHTSTSNKQKFKGKSKFCDILLAEIAGCITKEEVTIRSFCAYWAKYVWNAMHERNEPPLNWVALG
YTEQNRFAAFDFFYGVDSPASAEPEGGLLAPTTESMRAANMARKEIAIKE
>gi|50080148|ref|NP_758815.2| coat protein [Beet black scorch virus]
MAPKRNKGGKKSRMSDETVRAPAAGGVIQRTPGIPPRIRSTTIGTRVTNTELLAGVNVAAAGAFSVVGAGLFPSNLGWLN
GIASNYSKFRWLAIKLIYIPIVPTTTAGAMTMALSYDPADATPTSFQQVQQMYNSITAPVWAGFDGATVQLLGERPTTGA
VCIDVDVNRFGFTWYRYATLAAITALTANDRNLYIPSVCNVATSGGTAATNVGNLMIKYSIELIEPIPAAIN
>gi|34610125|ref|NP_919038.1| capsid protein [Macrobrachium rosenbergii nodavirus]
MARGKQNSNQIQNNSNANGKRRKRNRRNRNPQTVPNFNPIVAKPTVAPLQTNIRSARSDVNAITVLNGSDFLTTVKVRGS
NNLTDSKSRILVKQPISASSFLGTRISGLSQFWERYRWHKAAVRYVPAVPNTLACQLIGYIDTDPLDDPNVILDVDQLLR
QATSQVGARQWNFSDTTTIPLIVRRDDQLYYTGQDKENVRFSQQGVFYLLQVTTLLNISGEAITNDLISGSLYLDWVCGF
SMPQINPTPVEVSQLTYNADTIGNWVPPTELKQTYTQDITGLKPNSKFIIVPYMDRVSSEVLQKCTITCNEVDAVGSISY
FDTSAIKCDGYISFQANSIGEATFTLVTDYQGAVDPKPYQYRIIRAIVGNN
>gi|85718604|ref|YP_459948.1| coat protein [Alternanthera mosaic virus]
MSTPFPQITQEQMNAFTPHATSNLLPSSEQLTTIASLLVAAKVPAASTTTIALELVNFCYDNGSSTYTVVVGPSSLAEVS
LSQVANIVKASGTSLRKFCRFFAPIIWNLRTDKTPPANWEANGFKPTEKFAAFDFFDGVENPAAMQPPGGLVRTPSQAER
IANATNKQVNLFQAAAQDNNFASNSAFITKGQLSSNSPTIQYLPPPE
>gi|110645396|ref|YP_667841.1| coat protein [Chickpea chlorotic stunt virus]
MNTVVVRNNGRRRRNRRTVQRARRRNPVVVVEAPRQPQRGRRRRRNRRRASGRSTAGRRGSSETFVFSKDNLAGSSSGSI
TFGPSLSDCPAFSSGILRAYHEYKISMVKLEFISEAASTSSGSIAYELDPHCKSTSLGSYINKFGITSNGQRTFAARLIN
GIEWHSSDEDQFRILYKGNGGSAIAGSFRITIKCQTQNPK
>gi|126010923|ref|YP_001039887.1| coat protein [Nootka lupine vein-clearing virus]
MTNSSAITNHPATTKAAVSGVAWAVKLRSKGWASLTTAQKRAARLATGISDGPVVVVMPKRNKVKNPNNHTIEGQAGKST
NISKAEFISTVTGSTGSSPTFSSWRINPSDVGSFPTISCFANRFNQYQITSMAVRFSPARSFQTNGMISLAFTDDSTDPV
PTSRQQMAGYTSMVSSEVSQNLLMKIRGDSKRRYIRDSTNENGKLVDFGRVILSVHGCDSGVGDLGDLYFEYTIRFSDPT
FVQRDSQTSAEEEEVGPHFADFRATDTEWTATLVAPGNWVVSVVGSNVPDRMTIRGDGATGEVHEGGDSYSYVAVAVVRA
QIQGAVVALNLTGGGKVTKVVVSRM
>gi|242346758|ref|YP_002985640.1| coat protein [Hydrangea chlorotic mottle virus]
MPPKENPILQGQEGGSGSHESNVERNAQHEASEQRRRPPRSTGGNHESQLEQRLTKLIDTLNEGRYNSNLQNISFEIGRP
NLEPVLEMKRNPANPYGRFSVDELFKMPVSTVSNNMANTEEMAKISSALAGMGVPTEFVAEVILKMAIMCASVSSSAFLD
PSGSIEFPGGAIPVDSVAAIMKRESGLRRVCRLYAPVVWNSMLVRKQPPSDWQAMGFPFNARYAAFDTFDYVTNAAAIQP
VEGLIRLPTPAEYIAHNAHKRLAIDKSNRNEKFANLETEVHWRPSRD
>gi|119943075|ref|YP_941471.1| coat protein [[NAME] necrotic shock virus]
MSVNRGKNVLNNNSNGCPTCFDKLDAAATNCARCMRNGGVSNRQRRNARRAANFRNQRPVPVVPVSAPTTSKSLKLPGNQ
VWVTRKPSDWAAKTVDTNDAITLKTIFNGIPEINDDTKIFRVLIGFVAVSDGTFGLVDGVVGGSIPDPPIIGRLGFKKNT
YRSRDFRFDGKLTPQVADKAIVWCLDSNRRDAKRVRLADFWIAISRPNPLMPPDEFLSGDSD
>gi|212525351|ref|YP_002308573.1| coat protein [Blackberry chlorotic ringspot virus]
[NAME]
PVPLPVVPVPQPATQRNLRLPNGQVWVTRKPTDWAAKVNDANDAMLLKTIFDGITEIKPDTKVFRVLIGFVAMSDGTFGL
VDGVTGDTVPELPIIGRWSFQRDVYRSRDIGLDGQPADQLSEKAVVWCLNTNKRAEKRVRLADFWVAIAKPKPLMPPPDF
LVEDN
>gi|9630736|ref|NP_047280.1| coat protein [[NAME] green ring mottle virus]
MADEEFEKNSDGTFKLDAQGKRIPKKPQAQTDPKSSNSQDPNSKKSDVDILRARRKRVTFNPADPTSSPSRSFINSIQET
NPVTLNIASDDTVKAITSDWVEFLKIKQEEVFDCIFDVVLFCYHNSSSDKTKMVGKARSGVGLEDLASTIRSYCSLRSFC
SKYAPVVWNYGISNDLPPANWQRRKVVEGAKFAAFDFFEAVTSEAALQPVEGLVRNPTDKEMTAGASLKEISLMRDEIRR
GTSSTLMTEVTGGRTGQIQPIKKIGGDE
>gi|18314287|ref|NP_563612.1| coat protein P3 [Bean leafroll virus]
MVARGKRVVVRQLQTRARRRLPVVLATAPVRPQRKRRQRGRNNKSRGGNGFARRSSQVHEFVFSKDNLNGNSKGSITFGP
SLSECKPLADGILKAYHEYNITNVELAYITEASSTSSGSIAYELDPHLKNTTIQSKINKFSITKSEKKKFSRKAINGQAW
HDTSEDQFRILYEGNGDAKIAGSFRVTIKVLTQNPK
>gi|18314289|ref|NP_563611.1| coat P3 and systemic movement/aphid transmission P5 fusion protein [Bean leafroll virus]
MVARGKRVVVRQLQTRARRRLPVVLATAPVRPQRKRRQRGRNNKSRGGNGFARRSSQVHEFVFSKDNLNGNSKGSITFGP
SLSECKPLADGILKAYHEYNITNVELAYITEASSTSSGSIAYELDPHLKNTTIQSKINKFSITKSEKKKFSRKAINGQAW
HDTSEDQFRILYEGNGDAKIAGSFRVTIKVLTQNPKXVDGEPDPPGPGPDPPPPTPAPTPQPQPTPKHERFIVYTGVPES
RISAQSTDDSISVYSLQNQRLRYIEDENANWTNIEARWYSNNNVKATPMFIFPVPQGKWSVEISTEGYQPTSSTTDPNNG
KCDGLIAYSDDDKTDVWNVGVQKNITLSNNKADNTWKYGHPDLEINNCKFNNRQVLERDAYISFHVETTGPNASFFLVAP
PVQKTARYNYAVSYGAWTDRMLEFGSVTVALDEHLEGGNSSRYIRRSPRPGHLESTRTYDLHLLPHMDDLIAANTTAVVD
GYGSSISIDRQVLVAVDNHIVDSGDETDDLPGYSSSSSEAPKLPAVNQTKLPPKGFLSRLRESEIEEIADKPTEITTPEV
RQLADATHQPFAAGMYNDAFERLSINEKKRNFDSVKDDIAEIERTLPKEEYRVPKLPRIKPASEVDNDHYGESQQTLAEI
ERRNVWASKDDAVAVESPPPGYPLGPIEARELMPVEWSRPDYEPPKPKKSLFGRLKSQAKVEANPSSPRNDIRRSSFSSF
RR
>gi|19774247|ref|NP_608316.1| 29 [NAME] coat protein [Tobacco necrosis virus D]
MPKRGRVGLAESFQSKSKKQKEAEYNAFQREKMERALVNNATAARKGSGMSFRPLTVPVAGSVIYSRPRVPQVRTNQMST
FVVNTELVANITLAAAGAFSFTTQPLIPSFGSWLANIADLYSKWRWISCSVVYIPKCPTSTQGSVVMAIVYDAQDTVPTT
RTQVSQCYQSITFPPYAGYGGASALNHKGSSGESLVSTLDTNRVDKKWYSTIGNAAFTALTSIDKNQFCPATAIIAGDGG
PVAATAVGDIFMRYEIEFIEPVNPTINI
>gi|9630813|ref|NP_047413.1| nucleocapsid protein N [Porcine reproductive and respiratory syndrome virus]
MPNNNGKQQKRKKGDGQPVNQLCQMLGKIIAQQNQSRGKGPGKKNKKKNPEKPHFPLATEDDVRHHFTPSERQLCLSSIQ
TAFNQGAGTCTLSDSGRISYTVEFSLPTHHTVRLIRVTASPSA
>gi|62327414|ref|YP_224096.1| coat protein [Mint virus 1]
MVDTAGKLAVIDAFNVEDERIISSVSDLAEIRQKFEKFVTDKLQGDLKDLDLHLGLILVAFAIKTTSRQAVKGDAEFVNY
TLSGHVSTATEKDITEFLNSLPQLKDRKNKARVFCRSFAKEYIKTCRSHANSLPKQTRAIKLGIPDRYHYLQADFVTDCS
ELTDEEQAVLLHGRNHAVAPINSAATPIVTNLYELGGGKRN
>gi|9627424|ref|NP_041887.1| coat protein [Cardamine chlorotic fleck virus]
MAIKEDPRLVKMASLGVPWAVKVTTKGWGSLTTKQKIAARAALQIPMRVTKQPTPKVVRVSAPAAVSYREVTGAPRVTTA
GKVLTHTASELITTLKKNTSLEPKYVEAIVNPSRVGTFNQLPDIAASYEKYKFTSLRFRYSSTCPTSTGGKVALAFERDA
ANPLPDNLTAFYNLEGNTSSNPRDSFVLTVPCDNVARFVADGGSDPKLVDFGKLLAASYGQGEGDANGLGEIHIEYTVQL
YNRLGSAQRSQIGSLDGKFLGPRLVEVTSGKSDKGTKFTFSFHGCGLIPILWLAKPRWPLTAGSAVACEVLGQSGDDSVQ
WAGIRISEREQTVEFEHTETTPEAKWSVSRL
>gi|258676970|ref|YP_003204960.1| coat protein [Tomato infectious chlorosis virus]
MENLSGNANFDETNTSRVNSDGIGSHMEHDDDDRSVNGPPSDEINNHTTRSVHGRDHTSGNIGDYSKADLSRIMVKVSRP
DAMSESDSNLYKEVIVEYLKNNCTGGAEPDKVLVVAFFVALCQYALNSGTSVKAISDRTVDLSFGYDNQKYTVKAGHFLS
YAQSRTSGHPNALRRFMRSSLETVKQLQDVGLIYSNGVVAAKHGVVKEFRNSYADFDTGHLDRMSNDDLAALMLAKCHAL
[NAME]
>gi|289522105|ref|YP_003475891.1| coat protein [Olive latent virus 3]
[NAME]
PPRDDRVDHQPSLPLAPQIQETTSSVPHVDIPFQWLSASLTGEKDVQQTVSLSASQTLSKLWALYRHAELRSVEAEFVPT
ASSFSKPISISCAWTIASITPASGDETDYFGGRFLTIGGPVLLSSTTHIPCDLRSINPTLRSSVEFRDTPRVTFTARAVA
GATANTPLAHFIIRGVLRLSGPSGAKFA
>gi|242916048|ref|YP_003002362.1| coat protein [Lettuce chlorosis virus]
MGDSKETKNAENKKEEDQDEQILEEYVKRESEGGEKMTNLSVKDLVTSEHMNPEKLGDIVVYSNRGDVMTEEDEMKFETC
MRDFARKFVFKKVDGEPTADEFLAFYVSLVQSWLTQSTSLKNSRQRNLSNTLQIKGQKYSWKTSEFMDYIKGNLPHVANP
FRQYARKHEADIEILKATGKVKSDYHLQAKHGVLSQYWALPADYVNGSLINISDDDLAANLLMKCQALKGSSQERKYYNV
SQLAPGGCSK
>gi|304633684|ref|YP_003858591.1| nucleocapsid [[NAME] coronavirus BM48-31/BGR/2008]
MTDNGQSNSRNAPRITFGVSDTSDNNQNAERAGARPKQRRPQGPPNNTASWFTALTQHGKEGLSFPRGQGVPVNTNSTRD
DQIGYYRRATRRVRGGDGKMKELSPRWYFYYLGTGPEAALPYGANKDGIVWVATEGALNTPKDHIGTRNPNNNAAIVIQL
PQGTTLPKGFYAEGSRGGSQASSRSNSRSRGNSRNSTPSSSRGSSPARMAAGGDTALALLLLDRLNQLESKVSGKTPQQS
QVVTKKTAAEASKKPRQKRTATKAYNVTQAFGRRGPEPTQGNFGDQELIRLGTDYKNWPQIAQFAPSASAFFGMSRIGME
VTPTGTWLTYNGAIKLDDKDPNFKDQVILLNKHIDAYKTFPPTEPKKDKKKKADEVQSLPQRQKKQATVTLLPAADLDDF
SKQLQNSMNASPDSTQA
>gi|118725123|ref|YP_908763.1| 18 [NAME] coat protein [Cucumber mottle virus]
MAYSPITPTNLSLFSSNYVPFTEFYNYLVTAQGEAFQTQQGRDSVRDSLSGFFSSPVSPTVRFPDGVFYVFLGNPVLDPL
FKALLQSLDTRNRVIEVDNPSNPTTAESLNAVQRTDDSTVSSRVGLINLRAAITQGNGVVNRSIFESSNGLTWATSGSSS
SK
>gi|308125296|ref|YP_003915156.1| 18 [NAME] coat protein [Frangipani mosaic virus]
MSYTNISTTNIIYLARSYIPGVDFIDLIISGLGQSFQTQSARDEFRSQLIGSYKVVVSKTVRFPENTIYLWANNPTIRPL
LHAVFQALDTRNRIIEVESTNVVNPTSSETREATRRVDDATVAVRSQLQLLFDALSGGSGLYDRKAFEDASGLVWEEAAA
VGTAGTSGTGTTTA
>gi|308125289|ref|YP_003915151.1| P3 coat protein [Cotton leafroll dwarf virus]
MNTVVGRRTINGRRRPRRRNRRRQNQPVVVVQAPRNTQRRRRRRRGGRNRTGGRIPGGPGASSETFVFSKDSLSGSSSGS
ITFGPSLSDCPAFSNGILKAYHEYKISMVLLEFISEASSTSSGSISYEVDPHCKLSTLSSTINKFGITKNGRKQFAASFI
NGQEWHDTSEDQFRILYKGNGSSSIAGSFKVTIRCQFHNPK
>gi|9629187|ref|NP_056828.1| coat protein [Tobacco necrosis virus A]
MAGKKNNNNGQYIILRTPEQQVEIDQRNARRAQMGRMKKARQPVQRYLQQHGLRNGLSGRGGYIVAPTSGGVVTRPIVPK
FSNRGDSTIVRNTEILNNQILAALGAFNTTNSALIAAAPSWLASIADLYSKYRWLSCEIIYIPKCPTTTSGSIAMAFTYD
RNDAAPTARAQLSQSYKAINFPPYAGYDGAAYLNSNQGAGSAIAVQLDVTKLDKPWYPTISSAGFGALSVLDQNQFCPAS
LVVASDGGPATATPAGDLFIKYVIEFIEPINPTMNV
>gi|313122768|ref|YP_004035882.1| coat protein [[NAME] mild mottle virus]
MESVFDLNKLVDSEMAEKTKTSVPKAPDGTALPDIDAELQKRLDDLRAFLRKTQSASEITNPGFELGRPELKQSTFNSDK
HTHIYGKWSIDQLSRIVPKKISNNMATAEEMAKVQITLEGLGVPTEHVAEVLLQVAIYCKDVSSSSFMDSSGTFDWKGGS
ILSDSVLAALRKDDNTLRRVCRLYAPITWNFMLTHKAPPSDWVAMGFKWDDRYAAFDCFEYVENPAAIQPAEGLIRKPTS
SEKIAHNTYKRLALDRSNRNEIYSNLNTEVTGGTLGPEISRNFNHAKK
>gi|315192969|ref|YP_004070199.1| nucleocapsid protein [Feline infectious peritonitis virus]
MATQGQRVNWGDEPSKRRGRSNSRGRKNNDIPLSFYNPITLEQGSKFWNLCPRDLVPKGIGNKDQQIGYWNRQIRYRIVK
GQRKELAERWFFYFLGTGPHADAKFKDKIDGVFWVARDGAMNKPTTLGTRGTNNESKPLRFDGKIPPQFQLEVNRSRNNS
RSGSQSRSVSRNRSQSRGRHHSNNQNNNVEDTIVAVLEKLGVTDKQRSRSKPRERSDSKPRDTTPKNANKHTWKKTAGKG
DVTTFYGARSSSANFGDSDLVANGNAAKCYPQIAECVPSVSSIIFGSQWSAEEAGDQVKVTLTHTYYLPKDDAKTSQFLE
QIDAYKRPSEVAKDQRQRRSRSKSADKKPEELSVTLVEAYTDVFDDTQVEMIDEVTN
>gi|320339431|ref|YP_004207809.1| capsid protein [Penaeus vannamei nodavirus]
MKRKPNSNQNNNNNRGNGNGLRRVRGGRVSRRRVVINQSNQSMPVTSNGAPLQALTSYSRPNVNKISRLGPDSDFLTSVV
AKASTSIVTPADRILVKQPLSASSFPGTRITGLSSYWERYKWLSAVARYVPAVPNTVACQFVMYIDTDPLDDPSNISDDN
QIVRQAVSQAGSNQFNFNTSKTVPLIVRADNQYYYTGVDKQNLRFSLQGILYIIQVTDLINFNGELITQDLTCGSLFLDW
[NAME]
INMDPTVTTVSGFIKVKTDTFGTFDLSVVLTTASKKQTTGFNIIAATS
>gi|18138527|ref|NP_542613.1| coat protein [Grapevine fleck virus]
MSLPADLLLGAISSLLRNPPTSDAASPSADQPAVSSSRSDSRLVSAPLPAAPPAPTAIARNPRVSIHLPFQFLWYDITGT
ESSYTSLSIASRPEVVTVARPYRHARLTSLEAFVQPTASSATYPQTVDLCWTIDSVTPARSEILSVFGAQRIAWGSVHFS
APILLPAELSSLNPTIKDSVTYTDCPRLTCGFYRNDACVALGSSAPICGSILIRGVIECSAPINRPTPSS
>gi|20143437|ref|NP_619563.1| coat protein [Garlic latent virus]
MTNEEEELNRVRNLPTRNPGTELEGERSKAVNDVGVMEREGFEAVLRRSEDRFNKLKEKCIAELSCINVTNCGWESGRPK
AQLADSLKGDASNIFTRPSMDALLVRNYAPESNNLATAEELAKISAKVQALGAPEECLAEVFWDICMYCTTAGSSPNVNP
KGTISIGGRVVTRDMVVAVIKEYSTLRQVCRCYAPVVWNYMLLNEQPPANWDAKGFTENTKYAAFDTFDAVTNKAAIQPL
EGLIRAPTDAERIAFATHKKLALAKNSQNSRYANTSAEVTGGFFGCVPKNNFRENRC
>gi|21427650|ref|NP_659016.1| coat protein [Garlic virus E]
MNDPTNAGTRPPPQSSGSQSEQARPNVTAFGQNQLRPTGSREPTNGSNMGTNEQNDLMPAVNDFEALTADVESNSVASRT
TVREILDMLQAKRQGATPKDLFSLAWTCYHNGSSRFVTLATNAPCGMPHSELKDLVENHCTLRQFCGFYAKACYVTGRQQ
NKPPANWSRKGYQDDSKFAAFDFFNAVLSDSSPVPPGGMRFKPTDAEILGHSMNAKMSIVESRRASNMVSTRADILAQQQ
IHEQPKPPMITF
>gi|21427651|ref|NP_659014.1| coat protein [Garlic virus E]
MTATYCCRRTLKPLISYNIAQTIVSPFYIRDAKTSSTRLGLMVCVKLAQRLNLMNGDEFSDQDLMNDPTNAGTRPPPQSS
GSQSEQARPNVTAFGQNQLRPTGSREPTNGSNMGTNEQNDLMPAVNDFEALTADVESNSVASRTTVREILDMLQAKRQGA
TPKDLFSLAWTCYHNGSSRFVTLATNAPCGMPHSELKDLVENHCTLRQFCGFYAKACYVTGRQQNKPPANWSRKGYQDDS
KFAAFDFFNAVLSDSSPVPPGGMRFKPTDAEILGHSMNAKMSIVESRRASNMVSTRADILAQQQIHEQPKPPMITF
>gi|21427652|ref|NP_659015.1| coat protein [Garlic virus E]
MNGDEFSDQDLMNDPTNAGTRPPPQSSGSQSEQARPNVTAFGQNQLRPTGSREPTNGSNMGTNEQNDLMPAVNDFEALTA
DVESNSVASRTTVREILDMLQAKRQGATPKDLFSLAWTCYHNGSSRFVTLATNAPCGMPHSELKDLVENHCTLRQFCGFY
AKACYVTGRQQNKPPANWSRKGYQDDSKFAAFDFFNAVLSDSSPVPPGGMRFKPTDAEILGHSMNAKMSIVESRRASNMV
STRADILAQQQIHEQPKPPMITF
>gi|37674204|ref|NP_932792.1| coat protein [Lily symptomless virus]
MQSRPAQESGSASETPARGRPTPSDAPRDEPTNYNNNAESLLEQRLTRLIEKLNAEKHNSNLRNVAFEIGRPSLEPTSAM
RRNPANPYGRFSIDELFKMKVGVVSNNMATTEQMAKIASDIAGLGVPTEHVASVILQMVIMCACVSSSAFLDPEGSIEFE
NGAVPVDSIAAIMKKHAGLRKVCRLYAPIVWNSMLVRNQPPADWQAMRFQYNTRFAAFDTFDYVTNQAAIQPVEGIIRRP
TSAEVIAHNAHKQLALDRSNRNERLGSQETEYTGGVQGAEIVRNHRYANNG
>gi|110835690|ref|YP_699987.1| Coat protein [[NAME] common latent virus]
MSGAFGVDTVSESSLAAQKALDRAEANQKNADKLKKFAQPESDGSDDEASLEQRLNKLREFLRKQRGAIRVTNIGFETGR
PTLNLADDMRPDPSNPYNRPSIEALATIKPRAVSNNMATTEDMMRIYTDLEGLGVPTEQVQTVVIQAVLFCKDASSSVFL
DPRGSFEWIGGAISADAVIAVLKKDASTLRRVCRLYAPVTWNYMLTHNAPPSDWAAMGFQHEDRFAAFDCFDYVENSAAV
QPLEGLIRRPTPREKIAHDTHKDIALRAANRNQVFGNFSSGVTGGRNGPELTRNYGNSGLR
>gi|126644791|ref|YP_001086456.1| Coat protein [Chrysanthemum virus B]
MPPKPAPGDTEGNASGSTPTPPPPPPAQTAEEARLRLAEMEREREQEQLLDEMNSNTPAEDARNISRLTQLAALLRREQT
NVHVTNMALEIGRPALQPPPNMRGDPTNMYSQVSTDFLWKIKPQRISNNMATSEDMVKIQVALEGLGVPTESVKEVIIRL
VLNCANTSSSVYQDPKGVIEWDGGAIIVDDVVGVITEHSTLRKVCRLYAAVAWNYMHLQQTPPSDWSAMGFHPNVKYAAF
DFFDYVENGAAIRPSGGIVPKPTRAEYVAYNTYKMLALNKANNNDTFGNFDSAITGGRQGPAIHNNLNNANNKTL
>gi|190336511|ref|YP_001960944.1| coat protein [Lettuce virus X]
MGTPQAVNTPVNNPPRPTPVLQRPPANSSGPNLADPNRAPSMEDLAQVKYVSSSSAVATPAQITKLGEWFVKVGIEPNST
GPAMWDLARAYADVQASRSAMLTGASAADPNVSRQSLARQLDAVFLTPRQFCMYFAKVVWNILLTTQVPPASWAKLGYSY
[NAME]
EF
>gi|9628879|ref|NP_043911.1| capsid protein [Olive latent virus 1]
MVNFYWDSRIQRWFYESGPQRVRTYIKRISPHQMASLPARKTKRSPPNRGNLQVLPVIAPVAGGVISTEGHVPRITTTNE
QTVVRNTEIISAINSAALGAIFGNYVTVIPSNLSWLAGLSDLYSKYRWRKLRFIYLPVCPTSTQGNVSMSLSFDRIDTQP
TSITQMQQGYRAITFPPYAGYDGAMALASFGNIPGMVVVDVDCARMDKLWYPNVTLATFLAMAPTSRTDTCGVTLFTASD
QGPAAATNFGQVFCQYEIEFIEPVNPTVNL
>gi|9628917|ref|NP_056812.1| 18KDa coat protein [[NAME] ringspot virus]
MSYTITDPSKLAYLSSAWADPNSLINLCTNSLGNQFQTQQARTTVQQQFADVWQPVPTLTSRFPAGAGHFRVYRYELILE
PLITFLMGTFDTRNRIIEVRNPQNPTTTETLDATRRVDDATVAIRSAINNLLNELVRGNGMYNQVSFETMSGLTWTSS
>gi|9629523|ref|NP_044744.1| capsid protein [[NAME] white stripe virus]
MTTSKKSNNNNKSGKSTPKPNKNRRQSRKGQMVLQTIVEPSARGSIYRNVIPPGIFNRDSVNLLSHTELFVGVDSGALGA
FVLNGGAIIPSQMTNCNRHAVNFSKYSWKYLEFIYIPFVATTFPGQVVLAPNFDRSDANPTSIASLEQYDYAVSTPIWGG
SEGSRRMHSNAACSAVNVIIETDNFDKVVYPYKTLANFTGLPAVDQNIFAPATMFVATQGGNNVAIQLSVGKLYCKYVIE
FFNPIDPASNM
>gi|20153394|ref|NP_619676.1| coat protein [Hibiscus chlorotic ringspot virus]
MLQKNDPAVQRAFNAHLPWAIKLKNDGWAALSKGQKRAANRYAGGTRPVTSQIKLSTLKVTAPVAASMRTRNPGANIRTA
GKSVTVVHCEFVGNIARQTGSGLLVVERTINPSNVLSFPWLSVLAAGYEKYRVSSLSLRYSPTCATTTEGKVILAFDKDA
ADASPTSKSDMYNHDGAVGVSPWDSAMLQIPCDNVDRFINDSSSSDPKLVDFGKVVVANYGQSEGDVDVIGELFLQYSIT
LKIPQGMATPTQSGVGISSVGPSLFRVQLRDDTHVFTCNGTGRFLFFFNSTVDATSTIAGMEVKQKSSTDDKGETTIMEL
LATESGGTIAILAATGTLTWWACRN
>gi|296006065|ref|YP_003620402.1| coat protein [Chiltepin yellow mosaic virus]
MEDQTASRAKQPSIPSPGFTLPKPDTQLSSAIELPFQFQATTFGAAETAAQVSLASSTPITKLASLYRHAQLVECHAVIT
PTALAISNPLTINIVWVSDNSTAKPTEILNVYGGSSFTFGGAITTTKPIILPLPMNSINPMLKDSVLYTDTPKLLAYSAA
PSSPTKQPTATIQIYGKLRLSSPLLQAS
>gi|9629513|ref|NP_044736.1| capsid protein [Galinsoga mosaic virus]
MKTTQPKTKPSGSPLADNNKSYRSNRTNKQKTQDQSAPVAISRQVRGSVPKLAGNRPFTFGHRELIATISNTVLFQVNGG
VGGNLYRLNPANSSLFTWLPSISANFDQYRFLKVWLEYAPFCSTTEAGRVGLYFDKDSQDPEPTDRVELANFGHLSETVA
WSPIELHLPTDNVVRYMSDSSVSDPKLIDLGQIGFATYGGGSTNAIGDLFIHYTIELQQPQPTYFAVQTLQSGNGSSSAG
PTVAAVTASTGTSTTLTFRSPGTYLVNLFQRSLTFTSIVATGGTVINSQATLQSGATAYCSQHNVTVSTPGGALVATGTG
FGNYNFQVTRARVQNRCDLL
>gi|315506981|ref|YP_004089623.1| coat protein [[NAME] latent virus]
MATSGQDTTSANPAVTRNEETPVVTEVQATNAVATTPEVVPVATAPLPASTQPTATTSSFEVSFTPATSISATPMTFPEP
VVSQLVPFPPLVATGQSSVQTTAVPDTSRLQQMAAANRGFSEGLRVHPLPITPASSNPFTTGNIFTSSVFSGRGSNAATS
SEAIGEPTPQRVFQSSQGSNPPAQGHYSQQHTSGSVGNVITPFTLGNRAPRRAASSIGGTRRRLDSVGLKSIMYEPQAGV
VATDAKMRAIGRALIEMGIREDQLTEVGVYLARHCADVGASDKSTLLGTFPGSDITLEEVGTRIKQTEGCTLRQYCAYYA
KHVWNLMLQTQKPPANWVGKEFKFETRYAAFDFFFGVESSAALEPADGLIRLPTQSERVANNTSKEIQMYRIRSMEGTQA
VNFGEVTGGKIGPKPVLSIKK
>gi|190149261|ref|YP_001974326.1| coat protein [Brugmansia mild mottle virus]
MAYTITAPNQIVYLGVAYADPILLMNLCTTSQGNQFQTQNARTTVQQQFADIWKAVPAVNIRFPENGFLVYRYNAVLDQL
VTSLLNSFDTRNRIIEVENPPNPTNGEIMSATQRVDDATVNIRASITNLMNELVRGTGFLNRSSFESTSGLTWSTAPTT
>gi|322867243|ref|YP_004221743.1| capsid protein [[NAME] nodavirus]
MLKGVDRIVTVKDATTLTPGKSVVSLLITPLIADRLRAASQMFQKIKYHKLVFRVNSQCSTMTAGGYVAGFVKDPADEIP
SESVAVQYLMSNAGSYTQPWWRSTVHNIRASQRMFFTDKPALGADAIREYSPGRFYVIVDSTPSQTCPVTVDLEWTVELR
EATFKLPDTTTVISSIRPELSLSTYGMPNTSPMAGHVVVKPSGETPRWLTPARFQTMFGFAPDEDMCATIPTPVQCVLTG
ENAYQTVTATHFSAVLTDSAVQSFMLSAFNDVTQDIQPINHTWQIMDALGQIVTPFIAVIYDSAIWSATDSYTITTRTGK
PVPLDVFRFLHPNATVLPPEN
>gi|38707977|ref|NP_945116.1| coat protein [Pelargonium necrotic spot virus]
MALVRRNNNSNMVAVPAARATGAAIGSMMFSPTGAKLFWTGMDWVLDKTWQKIKNQFKSRKTDMILHPGAYPGAIAAPVA
VTRVIRGSKPKFTRSKGAVTITHRELVGQYNNSAGLVVNGSVGGTIYKLNPSNALLFPWLQSIASNFDQYKFDNVKLTYI
PMCATTETGRVALYFDKDSQDPVPADRMELANMFHLRETAPWAESNLNVPTDNVKRFTNDNTTTDLKLVDLGQIGIATFG
GSGTNPVGDLFIHYTVTFFEPQPSAGIVETEQTGAGALDSGPDMVSVGGDAISTLIVFKTPGTFILTLDSVIPPWGLLVP
TGVTVNSSTHAQATGFCQSIVNLTVSTPGGILQYNGTGFGNRTVNIVRAKVTNRVDII
>gi|253729533|ref|YP_003029840.1| coat protein readthrough [Wheat yellow dwarf virus-GPV]
MSTVALRNGNGPRRRRVSRRRVVARTQPMVMVATNGQPRRRRRRRPAGRGRRRVPRSTGGSHGETFVFAKDSLKGNSSGS
LTFGPSLSEYPAFKDGILKAYHEYKITNCVLQFITEASSTAAGSISYELGPHCKSSSLTSTINKFSITKTGARSFPAKMI
NGLEWVANDTDQFRILYKGNGDANTAGSFRITMKVLFQNPKXVDAEPGPSPGPSPTPPPPPPEPTPPVEERFIVYTGVAH
TTILAQSTDDAISLRNIPDQRFRYIENENFYWFNIEAQWYSNTNIKAVPMFYFPIPEGQWSVEISTEGYQATSSTTDPNK
GRVDGLMAYDDSSEGWNIGIGNNVEITNNKADNTWKYGHPNLEINSCHFKQQQCLERDGVISCHVKTIGPSATIFVVAPP
VQKLSKYNYAVSYGAWTERDMEIGLITVTLDEKRDSGSARKKILRSGLPEATNFTLAAHPEKENFGIQTSESPLAPAISP
KAQLLTLSDSDSEDDPLSASPDVGFGGTRLLVDTDIKTIPDPSVAEAFVNSAHVGEDPWADVRAFKSAQRPPRGPSSVAS
GSISGGSLRGTLRPASKPARETPYERDENKTTRRQKSRFSFGGGRSLKSHRAETVNLPKQAKENALDHPSHDVKRRIKTL
PPS
>gi|253729534|ref|YP_003029841.1| coat protein [Wheat yellow dwarf virus-GPV]
MSTVALRNGNGPRRRRVSRRRVVARTQPMVMVATNGQPRRRRRRRPAGRGRRRVPRSTGGSHGETFVFAKDSLKGNSSGS
LTFGPSLSEYPAFKDGILKAYHEYKITNCVLQFITEASSTAAGSISYELGPHCKSSSLTSTINKFSITKTGARSFPAKMI
NGLEWVANDTDQFRILYKGNGDANTAGSFRITMKVLFQNPK
>gi|60115400|ref|YP_209238.1| nucleocapsid protein (N) [Murine hepatitis virus strain JHM]
MSFVPGQENAGSRSSSGNRAGNGILKKTTWADQTERGLNNQNRGRKNQPKQTATTQPNSGSVVPHYSWFSGITQFQKGKE
[NAME]
SADIVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPASRSGSRPQSRGPNNRARSSSNQRQPASTVKPDMAEEIAAL
VLAKLGKDAGQPKQVTKQSAKEVRQKILNKPRQKRTPNKQCPVQQCFGKRGPNQNFGGPEMLKLGTSDPQFPILAELAPT
AGAFFFGSKLELVKKNSGGADGPTKDVYELQYSGAVRFDSTLPGFETIMKVLNENLNAYQNQDGGADVVSPKPQRKRGTK
QKAQKDEVDNVSVAKPKSSVQRNVSRELTPEDRSLLAQILDDGVVPDGLEDDSNV
>gi|9633807|ref|NP_051885.1| coat protein [Carnation mottle virus]
MENKGEKIAMNPTVQTLAQKGDKLAVKLVTRGWASLSTNQKRRAEMLAGYTPAILAFTPRRPRMTNSPPRTSRNSPGQAG
[NAME]
DTPPTTKVGFYDLGKHVETAAQTAKDLVIPVDGKTRFIRDSASDDAKLVDFGRLVLSTYGFDKADTVVGELFIQYTIVLS
DPTKTAKISQASNDKVSDGPTYVVPSVNGNELQLRVVAAGKWCIIVRGTVEGGFTKPTLIGPGISGDVDYESARPIAICE
LVTQMEGQMLKITKTSAEQPLKVVVYRM
>gi|334285103|ref|YP_004464931.1| coat protein [Bombyx mori Macula-like virus]
MEEIVPLVVSAASAIPSLVNAFSSSKPPQTDNPPARSMDMQPLPSSDSVVLSSQPLPPAPPPPLGSSLGRSPQRLIIPFQ
RLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTVDLCWTTADVTVEGVNVLATPSSSR
ITIGGLALMHQATLPCDLGYINPIIKSPIPYTNHPRLNIHFHQSPDAVLEGIRAGVKASVVIRGSISVSHPLVTGHG
>gi|333595892|ref|YP_004465361.1| coat protein [Passion fruit mosaic virus]
MPYQPVSLQTLPWLSANWADYKTLLSVLRATSATSFQTQAGRDSIRSQLAGCVSELVQVNVRFPERYLVYVNDPSISDVW
GALLKATDTKNRIIEVDNERNPSNNEIESVTRRVDDASVAIRINVERLLKLLGEVHGVYDRALFEQVSGLRWADDSAPAS
TSK
>gi|307346915|ref|YP_003896040.1| coat protein [Velvet tobacco mottle virus]
[NAME]
GTTNFSATSVTLAPNTFTWLAVQGSLYSKWRWISLRATYVPETASTTPGTVAMGFQYDNTDVLPTGTAGMSSLHGFVSGA
PWSGFSGSKLLAESPTTPIPAGAIATRLDCQNFGLKWYQYKSVIPAGDSGNIYIPAQLIVGTLGTGSTLRYGEVHIQYEI
EFIEPLPPSVNTLRDIYSRMILSSASDERKGEKSSQTLTDR
>gi|339276126|ref|YP_004464925.1| coat protein [[NAME] asymptomatic virus]
METERVLVTQPAISTQTDLLSIPSSPNPPTITQPFQIEIAALGKESYSDSISVAALSSIAAYTSLYKHAELHSLSATIHP
TNSAPSNPTAVALAWVPYNSAASPTQILSVYGGMMFCIGGSIQTLKPIEVLCDLSKVNPILKSNVTFSDTPKLLIQSVAP
DPPSKLPTCSITIKGMIRLHSPLLQASA
>gi|339906185|ref|YP_004732980.1| coat protein [Grapevine Pinot gris virus]
MSIRQELRSTVRRELIAKLSEANQVLHGLTQGNKDLVLDHIFANIAVEGTSGETIYPTTMVKCYESFNPSLPVVKEYSLA
EVVNKIRVYKESHTNNDIKLMTFRQVCAAFAIDAQLGLVKFYRLNMHTNIYKKHPKLCDKAPEVAFDFNEGLNFNNLTPN
QKSVIQNLNRLLFHVESERQKTNAITASGESAFSM
>gi|157939591|ref|YP_001497157.1| coat protein [Peach chlorotic mottle virus]
MLYSVYELLSNLLIFDRNSAFVPFMATTAAATASATVQPTTQQEVTAGLQSTTSSTFPTVTPVETPARVATTRSDPVTSG
YSLGNVTAALTRPTGSLPITVGLGALNLGDGGAVAVGGVTATTTPAAATVPMGRTESMEWFNRTYNNPASSAPFAFGVQP
GTNLGVPTQLGSSTGPVRRPRQKFTLKPINRPESSVVGSGMSKRLSIRDLAAIDYKPQAGSVASEEKISQIGLEFTKIGL
SSDQLTEVGVFIARHCADVGSSNQSRLIGTFPGSDVELEELATIIKSTAGCTLRQFCAYYAKMVWNLMLETQTPPAIWSS
KGYRDENKYAAFDFFYGVDSSAALEPVDGIIRKPTNSERVANETMKEAMSFRAAARDGTQSTNIGEITGGKAGPKPRLTI
KQ
>gi|194351516|ref|YP_002019750.1| coat protein [Potato virus T]
MDPTTFVQIRDEVLNLTVAAYSSQWDGQATQALKDGAKEQMLRFLFGRIAISSASRNTIWPDTEIASEDLQIGMSAASAG
PPPVAAAPISLIFRVNFNSYVKMLIALSNTSTNSFVKNKTLRQMCMPFAKYAYGYLSEMGYATWAYEKMPKLCRKAKWVA
FDFASGLLIDTTMQLNDDEKTVIQGLGARLFKTQQSIQIADSTMDGEAINREI
>gi|195546760|ref|YP_002117778.1| coat protein [Grapevine virus E]
MESKAIRSALMTVFEAKIPGLKAEPTNQEEVARNNSILANLFGNIAIVGTSAAVINYPVSVPCYNLESGRLNPHELMGEP
LKVAQVVMYMIAVRNSTTEPPLANLTLRQMCTPFAPEAYLFLRTAASAKIYTQLARKMTRIGNKEPQVVFDFAKGLPLST
[NAME]
>gi|194473851|ref|YP_002048674.1| coat protein CP [[NAME] yellow mottle virus]
MEELKPISVKQPSIPAPGTKLPPAPGQQSSAIVQPFQVSVADLGVSEVNVQITLSSDPTLSQLTAFYRHADLVECSAVLF
PNFTSSSNPTHCDLAWVPANSTASPKNILKTYGGNRFTLGGPITANEVISVPLPMNSVNCTIKDSVLYTDSPRLLAHSPA
PLTAKTIPSGTLVIRGKVRLSSPLPQPLTASS
>gi|346683615|ref|YP_004849318.1| coat protein [Tamus red mosaic virus]
MASPPSPANQPKVESNNPFKAPTLDRLKLMTFDVNSTLLPSTEEFKLISEDWAKLGISGDSLTENAMKLATFCYHSGSST
TTEMRGESSKPGVSLSRLAGVVNMHTSLRKFCRYFAPLIWNIHVESKIPPAAWQSKDFKEGEKFAAFDFFDGVENVGSIK
PPGGLIRKPTDKERIANATARALKLFEAAAQQNRMASNSVHYTQGRYSDTAPQIQFLPDPE
>gi|338826802|ref|YP_004659204.1| coat protein [Blackberry virus E]
MPDTPANPPANQAPNPVNAPNPPPPPPRNPASGGSSANPLIPADDELATLGTTVQANKVATQDAVSAVLAELQQGFPSAT
AIDLVSLAWACYHNGSSRYVTLEGSSAHGIPLASIKDVVENHCTLRQFCMYYAKLCYNKGRSDKIPPANWAAKGFKAESM
YAAFDFFNGVLNEAVPKPRTGMKFVPTEAEKAAHAVNAIMAITESRQQANQFSNRGNMLAMQQIRTPAPPPLITFDN
>gi|347762087|ref|YP_004869652.1| coat protein [Soybean yellow common mosaic virus]
[NAME]
LSTELSVTSTIVVASELVMPYSVGTWLRGVASNWSKYAWISVRYTYLPACPSDTAGTIHMGFQYDMADTVPVSVNQLSNL
RGYVSGQVWSGSSGLCFINGTKCLDTSSAISTTLDVSKLGKKWYPYKTSTDYTTAVGVDANIATPLVPARLVIAMLDGTS
TTAVNAGRLYVTYTIQLVEPIASALNN
>gi|352749715|ref|YP_004901691.1| coat protein [Grapevine leafroll-associated virus 5]
MSGVSQNVAPALPTTSPTHETEAERKAREDKEKADLEEIQSLPVIQGRTTVDTFEALINSSNGVLDLSRLELPRLFNVTI
PGVVSGKHKVIGARALWNLGKSKGISESDKHQVQFLMQSFQDFITHSTSPKVSSSSNRTITGKYDGKEVTVAHDEIKTAL
DNSIGSFGYENTPRQFGRAFTAAIVQGISSGKLEVNTKICASHGVPPNYYPYSPDCLHVDARLFGYDASLAAELGKMVAI
NKPSNSNRATHNLYEDTRVAPDIFLGNRR
>gi|352749716|ref|YP_004901692.1| duplicate coat protein [Grapevine leafroll-associated virus 5]
MEVTLCLSKVKEKLPVTCDEIFYLRNAGVYATVMPPERLSFFYDKLSVGNNNDRNKYRELFQFLDNLGNVVATNNGNFIK
FLDVDSVMEYFRRRYPDGGNLSSINKTPSSDYCCLTVPALTTFLNSVCGCIEGLTTVLAVGFTRKSDTDELWSFKNTFVV
FENSGEISTFYGDSMDTSNSALLEVLDSFGSTSGKTDFEKVVSLLSI
>gi|152994042|ref|YP_001351688.1| nucleocapsid protein [Scotophilus bat coronavirus 512]
MASVKFQPRGRSKGRVPLSLFAPLRVTDEKPLYKVLPNNAVPQGMGGKDQQIGYWVEQQRWRMRRGDRVDLPSNWHFYFL
GTGPHSDLPFRKRTDGVFWVAIDGAKTQPTGLGVRKSSEKPLVPKFKNKLPNNVEIVEPTTPNNSRANSRSRSRGGQSNS
RGNSQNRGDKSRNQSRNRSQSNDRGSDSRDDLVAAVKKALEDLGVGAAKPKGKTQSGKNTPKNKSRSGSVQRAEAKDKPE
WRRTPSGDESVEVCFGPRGGTRNFGSSEFVAKGVNAPGYAQAASLVPGAAALLFGGNVATKEMADGVEITYTYKMLVPKD
DKNLEIFLAQVDAYKLGDPKPQRKVKRSRTPTPKPATEPVYDDVAADPTYANLEWDTTVEDGVEMINEVFDTQN
>gi|253750539|ref|YP_003029852.1| nucleocapsid protein [Rat coronavirus Parker]
MSFVPGQENAGSRSSSGNRAGNGILKKTTWADQTERGQNNGNRGRRNQPKQTATTQPNTGSVVPHYSWFSGITQFQKGKE
FQFAGGQGVPIANGIPSSEQKGYWYRHNRRSFKTPDGQQKQLLPRWYFYYLGTGPHAGASFGDSIEGVFWVANSQADTNT
SADIVERDPSSHEAIPTRFAPGTVLPQGFYVEGSGRSAPASRSGSRSQSRGPNNRARSSSNQRQPASTVKPDMAEEIAAL
VLAKLGKDAGQPKQVTKQSAKEVRQKILNKPRQKRTPNKQCPVQQCFGKRGPNQNFGGPEMLKLGTSDPQFPILAELAPT
PGAFFFGSKLELVKKNSGGVDEPTKDVYELHYSGAVRFDSTLSGFETIMKVLNENLNAYQNQAGGVDVVSPKPQRKRGTK
QTAQKEELDSISVAQPKSAVQRNVSRELTPEDRSLLAQILDDGVVPDGLDDSNV
>gi|253756591|ref|YP_003038505.1| nucleocapsid protein [[NAME] respiratory coronavirus AH187]
MSFTPGKQSSSRASSGNRSGNGILKWADQSDQSRNVQTRGRRAQPKQTVTSQQPSGGNVVPYYSWFSGITQFQKGKEFEF
[NAME]
ILDRDPSSDEAIPTRFPPGTVLPQGYYIEGSGRSAPNSRSTSRASSRASSAGSRSRANSGNRTPTSGVTPDMADQIASLV
LAKLGKDATKPQQVTKQTAKEIRQKILNKPRQKRSPNKQCTVQQCFGKRGPNQNFGGGEMLKLGTSDPQFPILAELAPTA
GAFFFGSRLELAKVQNLSGNLDEPQKDVYELRYNGAIRFDSTLSGFETIMKVLNENLNAYQQQDGTMNMSPKPQRQRGQK
NGQGENDNISVAAPKSRVQQNKIRELTAEDISLLKKMDEPFTEDTSEI
>gi|262396912|ref|YP_003288761.1| coat protein [Tiger puffer nervous necrosis virus]
MVRKGDKKLAKQATTKAANPQPRRRVNNRRLGSKGDAPLSKASTITGFGRPTNDVHLSGMSRIAQAVLTAGTGTDGYVVV
NEIIVPELLPRLGHAARIFQRYIVETLEFDIQPMCPANTGGGYVAGFLPDPADNDHTFDAIQATRGAVVAKWWESRTVRP
QYARTLLWTSTGKEQRLTSPGRLILLCVGSNTDVVNVSVLCRWSVRLSVPSLETPEETFAPITSQGPLYNDSITTATSGF
RSILLGSGQLDIAPPGTVYSIDRPLSIDYNLGVGDVDRAVYWHLLKKKGDPNNPAGFLDWGLWDDFNKVFTTGVAYYSDQ
[NAME]
>gi|352749698|ref|YP_004901683.1| coat protein [[NAME] jalapa mottle virus]
MFALHADANTSTTSWCFMLLRHAVGHENIGCAHLPADYYGGICQNIGLCTKPRAHNGDVQIEGFTKLPLGLQAGARFLLQ
LVNMSPKADPSPSFVPPQPTPPPTSEPDRNVPAPDNRESLLEQRLTRLIETLGREQHNSNLRNISFEIGRPSLEPAPSMR
RNPANPYGRXSIDELFKMKIDVVSNNMATTEQMAKITADIAGLGVPSELVASLILKMAIMCASVSSSAFLDPDGSIEFEG
GAVPVDSIAAIMKKHAGLRKVCRLYAPIVWNSMLVRNQPPSDWQAMGFPYNARFAAFDTFDYVTNSAAIQPLEGIIRRPT
LEEVIAHNAHKRLALDKSNRNERFGNLETEFTGGIQGAEIVRNHRNANNG
>gi|357579590|ref|YP_004935361.1| coat protein [Actinidia virus B]
MSGATSRTGNLRKEIEELVLTGVVLAPDAKTAGVDKGMYLRTLFGYIALNGTSKKTTHYDDVDIIGNNITETSIDSRGKI
NVATAVRQMLSFSRITPTGAAKGATLRQMCEPFAEEARECLAILASKGIYSQLATKLSKLGQKEPQVMFDFNGGLDLGRM
SATEAATTQSLNSRLFRTEGAKAVFAAQSSVGEQAVEI
>gi|224923892|ref|YP_002647031.1| coat protein [Allium virus X]
MTDKTAATNVLSKAVNSNAIPFTTPKPEELSAMTFTLNNRSLPTPGELIAIAEQWKTLGVPGEAVTTHALQLTMFCYHSG
SSPNTEITGDSATPKVTLAQLAGVVMQHTTLRKFCRFFAPLVWNWALDHKIPPASWQANNFPPDEKYAAFDFFDGVTNGG
SMLPADGLRRQPTPKELIAHATAQSTNIFTASQNQLQTASTHLLHTKGRFSTEPTKQYYLPGPEA
>gi|348020289|ref|YP_004869993.1| coat protein [[NAME] yellows virus]
MNTVVGRRTINGRRRPRRQTRRIQRNQPVVVVQASRTTQRRPRRRRRGNNRTGRTVPTRGAGSSETFVFSKDNLAGSSSG
AITFGPSLSDCPAFSNGILKAYHEYKISMVILEFVSEASSQNSGSIAYELDPHCKLNSLSSTINKFGITKPGRKTFTASF
INGIEWHDVAEDQFRILYKGNGSSSIAGSFRITMKCQFHNPK
>gi|89888071|ref|YP_512244.1| nucleocapsid protein [Beilong virus]
MSRLGPALDEFRSFKNNPPRRGALTTAIQGIKKNVIVLVPTMKQPAKRFQFMTLILQIAWSAKSSAAFITGAFFSLLSMF
ADNPGAMLRNLVNDPDIDVQIAEVSDVNDSRITLATRGRGMERYEEEIVQMVETPPKGRDKAYPYAESDYVKIIPRSTED
LQIAIQTVTAQLWILLTKAVTAIDTARDSENRRWIKYEQQRRADADYRLDEGWLNFARVRIAADLAVRRYMVEILIDANR
APSPKARVLELICDIGNYISEAGLAGFHLTIKYGIETRYPALALNELQADLGTILALMKCYVELGERAPFMVILEDSVQT
KFSPGSYPLLWSYAMGVGSMLDRAVNNLNYARNYLEQPFYNLGVGMVEKMEGSVNRHVAEELGLTGEQIAQIKDLVKQEA
DHSGAVPKHTSRTGVGSAKFNPASVDELIPSDEDNQDDDDATTSYGKPYRPQIELAEKPDSVPINEHLARKYADADTDAM
RGQVAGILRKERKKKKHSKENAPGVVLPDSQSTGGDLSVIDS
>gi|55770821|ref|YP_138504.1| nucleocapsid [Simian virus 41]
MSSVLKTFERFTIQQELQDHEEDTPVPLETIRPLIRVFVVNSNDPALRAQLLLFNLRIIMSNTARESHKTGALLSMFSLP
AAAMGNHLKLATRSPEASIDRVEITGFEGRSFRVVPDARSTMSRAEVLAYEAIAEDIPDTLNHKTPFVNADVEQGDYDET
EGFLELCYSVLMQAWIVTCKCMTAPDQPPISIEKRMAKYQQQGRINPRFILQPEARRIIQNAIRKAMVVRHFLTYELQMA
[NAME]
LMDFAPAEYPLMYSYAMGIGTVIDTNMRNYAYGRSYLNPQYFQLGVETARKQQGAVDHRTAEDLGMSQADKVELAATLAK
[NAME]
GQSGFDFSVPQRAPGMSDEEFQAQMTKYIQHVQQHYQEAQEGAEDGGYNQTTDDQGAGGDFDT
>gi|148283123|ref|YP_001249270.1| nucleocapsid protein [Mapuera virus]
MSSVLSMFERFTMEQELQDRGAEGTLPPETIKSTIKVFILNSDDPRLRWKMMNFCLRLIMSDAAKISRKVGAMITLFSLP
ASGMQNHVRLADRSPDAQIERIEIEGFAPDSFKLILNERSSMTQEEINSLDFMARELPKGFQGKTVYLNVDAEGLVCDEV
EQFLDRAYTVLLQVWILACKCMTAYDQPAASIKKRTDKYKQQGRFLATYTLQAQAQATLQNVIRQSLIVRQFMAYELQIS
RHQGTITNRYYALVGDIGKYIENAGMSAFFLTIKYALGTRWQPLALAAFSGELTKIKSLMMLYRDLGENARYLALLEAPQ
MMEFAPANYPLLYSYAMGIGTVLDAQMRNYKYGRDFLNPVFFQFGVETARKQQSAVDVKMAAELGVTTTDKEEMAQTLTR
LGAARRTDASAYAATPFSGPAQQAQAMPAPQAIDSRDSTAQPAAPDPVPDDSFSSKYQSYLIMQEKMKDPALIDGIRANL
LSDPNCPEDISASDLQGAVERYVHEVIERVRQQGDYTGIWPSAGATAAEDAIGDFQS
>gi|151266278|ref|YP_001331027.1| nucleocapsid protein [Porcine rubulavirus]
MSSVLTAFERFTIEQELQDRGAEGSIPPETLKTRIQVFVLNDEDPHLRWRMFNFCLRLILSPATRTARKIGAMITLFSLP
AAAMQNHVRLADRSPDAIIERVEINGFVDGTWRLIPNDRAILPDATINALNVAADELPPDLVNRTPYVVQGGEDLPCDEV
EIFLQRAYSVLIQAWIMVCKCMTAYDQPAPSEERRIAKYRQQGRLEARFILQNPARRGIQKVIRESLVVRQYLAYELQIA
RNQSLVTNKYYAIVGDIGKYIENAGLSAFFLTVKFALGTKWQPLALSAFSGELTKLKSLMLLYRDLGEQARYLALLEAPQ
AMDFAPANYPLIYSYAMGVGTVLDPQMRNYNFARPFLNAMYFQFGVETARRQQGAVDTKMAEELGLTAQDKQEMTETLNR
LGAAGARGAAPAAPNPFNAAPPAPAPIPVAQPAQDGPHDNAAAAPAPAPGADAPGPAGLHIPGPGEPGFEPQEYYRQPGM
MDMVKNRLRIASGGAPGVLPHELDAAAQIYVDEVVTGLRRPNDFAGILEAMFQQLAEEQKGDLED
>gi|164607195|ref|YP_001649211.1| nucleocapsid protein [Oliveros virus]
MSGASDIPSFRWTQSLRRGLSHYTTQTKGDVLRDAKSLVDGLDFSQVSQVQRVMRKERRSDDDLLKLRDLNKAVDGLMMM
RNKQSNVSLKVGGLSKDELMELATDLEKLKRKINTNERSTPGVYQGNLTTAQLDRRSAILRSLGFQSRQGQNNGVVRIWD
IKDQKQLINQFGSMPALTIACMSVQGAEQMNDVVQGLTTLGLLYTVKYPNLDDLEKLSAEHTCLQFITREESANNISGYN
LSLAAAVKAGACLVDGGNMLETIYVKPDVFADIIKSLLRVKHQERMFVSEKPGMRNPYENILYKICLSGEGWPYIGSRSQ
ITGRAWDNTTIDFSKDVMYGPPPPVKNGGNIRLNPLTDTQEAVIKEAISKLNPDETIWVDIEGPPTDPVELALYQPTTGY
YIHCFRLPHDEKGFKNGSKYSHGILLRDIENARSGLLSRILIKLPSKLVLTCQGSDDIKKLMELNGRPDISTIDLSFPTD
QARFYESVVWEKFGSLCTKHNGVVLSRKKKGGNSGEPHCALLDCLMFQAAFEGNVPSIEPKPLLPSALVFKSESVVAM
>gi|20428616|ref|NP_620496.1| nucleocapsid protein [[NAME] yellow stunt virus]
MANDNVSDYANAAPFARFANLQNRETLNPIGNEAKEIPYNRDQYLTWLAEGKLFQIGALTDAEIVAAWTTIKTAMGNNTF
SETHMRSIVKIACNLRGITPGSTPLLVTYNPPQSATWAPAPSTDAIYSGTPVAGVIIPQNTGAGGEDTETEASKARAIAF
ICCYLLRFIVKTEEHLTNSLGNLKLQYSRLYSAQSATLSNWNPSNTWASRVKLGFDTYLTLRATVAYNIASADALLVPEN
VNYGLCRMLVFQHLELSGLQLYKMAMTLIAHFKLIEPNKFLSWIYDPLSEASIDQIYKIAVNYDNVNSKTHKHWKYAKLA
RGQYWLNTTVKRNQFLAYILADLELKYGLAGKSDYSSPKRMKALSGMPVERMTEAETISKAVEQMYTAIESAKRVDAGAA
YRLAKKLGPPRANAHSRRKEPNNSRQHRDKQPNSKQQGRDKRNKHQVLGRHSKPQAQGPPNKQQDLGPHNNKPKEASRPP
QQDRQQLAQPWRLTRRQRGARGHRTQTLSGMFCKGTCQCIQ
>gi|188543037|ref|YP_001911121.1| nucleocapsid protein [[NAME] virus]
MTQGKMTPEELKKLEHEYNQTEKALTESSQKLIQEIDQAGQNPDSIQQQSIKQRSDVVDAYRNKLKELQGMIAAGQAMLA
EEAKKKRKPDVPGVEEGDYLTAKSSLRYGNVVDLNPLSLEEPAGQTANWGKIFEYILTLTQVLLLKGLYILTTRGRQTSK
DNKGTRIKLKDDSCMEDRNGIKQHKYLYISLPTSQSSIQDDELTPGRFRTMISGLLPNEIKAKKLMSPVMGVIGFQHLAE
AWPGAMEKMLSDQCEYMTKDKANPSNSTNRVYFRTRQAQVDALNLPDISALRMFADQNYKIPADIESEATPWLFANAPDR
CPPTVLQVAGIPELGAFLALMQDIRGGILASSLRGTGEEKIAKKSSFYQSYVRRTQSMGVNCDQKIIHIFMDYLGSYCVD
HFNLGDDMDPELKAKAQALLEKKVKEISSQEPIKL
>gi|34482038|ref|NP_899654.1| nucleocapsid protein N [Fer-de-lance virus]
MELFDIADGFADHQINLRSSKQATGSLSAIKDQILVLIPGTQDSDILSNLLIALLSLIFNAGCPEPICAGAFLSLLVLFT
NNPTAALGTHAKDSDTVISTYTITEFSGMGPVLMNRDQVEEFMTNKLNDLIRVIKFPDLFVRSNKADALFNGPVEFKVAL
NSILIQVWNLLAKSITASNTAEGSEDRRTERFEQEGRIASIYELSKNMKKRLRETLRKHMIIKKTMVSIMQESVAMGSNG
GELVKTIAVISHYVVNAGLTGFFQTIKYGINTRSAALAVSDIQAELGKIKALMQLYKKKGENAPYMVILDDSDASYFAPA
AYPMIWSFAMGYGTAVDTALAGVNYNRSFLDSKWFAIGQKMAVESGSKVNVGMLKTLGLTEQQGQTLATILEESKDARAA
MISGISGSSNIKDGESFELEPNMSPSIYSESTTTKLDRIKKLAKEVRETAITAEDNIGSLDDESKVIAGMS
>gi|8486130|ref|NP_040982.1| nucleocapsid protein [Influenza A virus (A/Puerto Rico/8/1934(H1N1))]
MASQGTKRSYEQMETDGERQNATEIRASVGKMIGGIGRFYIQMCTELKLSDYEGRLIQNSLTIERMVLSAFDERRNKYLE
EHPSAGKDPKKTGGPIYRRVNGKWMRELILYDKEEIRRIWRQANNGDDATAGLTHMMIWHSNLNDATYQRTRALVRTGMD
[NAME]
QVRESRDPGNAEFEDLTFLARSALILRGSVAHKSCLPACVYGPAVASGYDFEREGYSLVGIDPFRLLQNSQVYSLIRPNE
NPAHKSQLVWMACHSAAFEDLRVLSFIKGTKVVPRGKLSTRGVQIASNENMETMESSTLELRSRYWAIRTRSGGNTNQQR
ASAGQISIQPTFSVQRNLPFDRTTVMAAFTGNTEGRTSDMRTEIIRMMESARPEDVSFQGRGVFELSDEKAASPIVPSFD
MSNEGSYFFGDNAEEYDN
>gi|89903000|ref|YP_516231.1| nucleocapsid protein [Ippy virus]
MANSKEVKSFLWTQALRRELGQYCSTVKSSIIKDAQSLLHSLDFSEVSNIQRLMRKDKRNDSDLKRLRDLNQAVFNLVEL
KSTQQKNVLRVGKLTSDDLLVLAADLDRLKNKVMRTERPQTLGVYMGNLTNQQLDQRKRLLDMIGISNARNAPRPGADGV
VRVWDVKDSSLLNNQFGTMPSLTLACMSKQGQYELNDVVQSLTDLGLVYAAKYPNAMDLEKLTQAHPVLSIIDVSKSSIN
VSGYNFSLSAAVKAGACMLDGGNMLETLKVTPQNLEDILASMLKVKRAHSMFVSDTPGDRNPYENLLYKVCLSGNGWPYI
ACRTSLTGRAWDNTVVDLGPPIDLSQNKQMSPAKPKGAGHGMPSGLTMSQILALKDLMAAVDPNAKTWIDIEGRAEDPVE
IAFYQPQTGAYIHFYREPTDAKQFKQDSKYSHGIDIGDLFNVQPGLTSAVLELLPPNMVLTCQGSEDIRRLLDSQGRKDI
KLIDVLMSKSEARKFEDEVWDKFGFLCKIHTGHVVEKKKRGNKEEITPHCALLDCLMYEAASTGRFSPGSIRAVLPRDMV
FRAVTEKVAL
>gi|89885731|ref|YP_516227.1| nucleocapsid protein [Mobala virus]
MSNSKEIKSFLWTQSLRRELSGFCTNTRVQVIKDAQSLLHGLDFSEVSNIQRLMRKEKRDDSDLKRLRDLNQTVNNLVEL
KSSQQKNTLRVGALTSDDLLVLAADLDRLKAKVNRSERPLTGGVYMGNLTQQQLDQRKILLQLVGMGGSRVPPRGGDGIV
RVWDVRNPDLLNNQFGTMPSLTLACLCKQGQEDLSDVVKALTDLGLVYTAKYPNLSDLDKLTHTHPVLGLIDGNKSAINI
SGYNFSLNAAVKAGASLLDGGNMLETIKVTPKNIDTILKCVLKVKRSVGMFVSDTPGERNPYENILYKICLSGDGWPYIA
CRTSISGRAWDNTEVDLGTNKDPINKGPPTSNKTAGAAGFNAGLTYSQMMELKDSMLQIDPTAKTWVDIEGRADDPVEIA
IYQPSNGHYIHFYREPTDIKQFRQDAKYSHGIDVQDLFTTQPGLTSAVLENLPKNMVLTCQGVEDIRKLLDSQGRKDIKL
IDVSMQKADARKFEHQIWDEYKHLCSMHTGIVVEKKKRGGKEEITPHCALLDCLMFEATTRNSLDIVIPRPVLSKDLVFR
SATPKVIL
>gi|164607216|ref|YP_001649223.1| nucleocapsid protein [Cupixi virus]
MSLSKEVPSFRWTQSLRRELSSYTQQTKTLVLKDAKMIADSLDFNQVSQVQRVLRKAKRSDADLDKLRDLNQEVDKLMVM
KSVQKNTILKLGDLGKDELMDLATDLEKLKRKIGDSGRDGPRPYMGNLTQSQLDKRTQILRVLGFQQQTGVSRGVVRLWD
VSNPAKLNNQFGSMPALTIACMTVQGGETMNNVVQALTSLGLLYTVKYPNLEDLEKLTQEHDCLQIITRDESAVNISGYN
FSLSAAVKAGASLIDGGNMLETIRVTPNNFSSIIKATLTAKRKENMFVDERPGNRNPYENLLYKVCLSGEGWPYIGSRSQ
INGRSWDNTSVDLNPKPDPGPRAPEKNGQNLRLSNLTEMQEAVIKEAMQKLDPTNTIWMDIEGPPTDPVELAVFQPTSGY
YFHCFRKPHDEKGFKNGSRHSHGILLKDLEDAQPGLLSYILGLLPQNIVITTQGADDIRKLLDVHGRKDIKLVDVRLTNE
QSRIFEQQVWERYNSLCRAHNGVIVPKKKNKESNIQKEPHCALLDCIMFQSVLDGHLPDTSLKPLLPDNLVHQAKPAFVM
>gi|212671438|ref|YP_002308454.1| nucleocapsid protein [Maize Iranian mosaic virus]
MASITIPVEQVTKFSDDVKSLTQKASEIPSSKSIIPQTEFSDAELKKTLKFWEVTAMDDATMVTQWSGVQSALAGGTFSA
QNLKELCQLAFNLRKPHEPGHVFIHNIPDSWKAYLEAATPDGTAIPATENESTMSTIGAAAATGSADETAPNKAAAIAFL
SCTLMRLAIKEPKHIMDAMTNIRSRYGSLYGRSSPFLNSVTFNLSQLSRIKQGLETYAVARGTLFYYTRHADSTYTYTTP
SYGICRYLLFQHLELEGMHIYKMLLALQTEWATVPMRLLLTWIRNPRSKLAVLEIVKILTNWDKANVDKGWKYARLVNNT
FFLNLSSRRNTYLCAVLAALNKKFVPQGTGDYANPNNIAVIKNMDSAVKKQVSPDVQIVERIYDIFLASSGSDDAGTAFT
LSRGVKRTSPNNPETRMQWTPTQELERDLENPRLRRGSRIREVNCRPESDMSQMQRELVFHESVSVSILCDEGRVMSDPI
TRVSSIKCGVLLL
>gi|9635242|ref|NP_058536.1| nucleocapsid protein [[NAME] grassy stunt virus]
MGKVQFGDGHWANNKEWSELLSEIFSKIRASIDGFANATADLAAGLEYQAFNPEKILRKLIASSTSLDDFVKDMRDLLVA
RYTRGTSFLFNAKNSIEKAKDKKKAEAIQVLINRYGVKKNAGDNAVDQATLGRISQVLAYMALRVALQITDYHKPIIPLR
PISTVDIKNAIIDVVPQFLYLKADQLDSKTNSEAALYVIHLCYQVCVSERIMTKAQKDKHSVHTKSAMITHCMGFVNLAM
DNSSVVSDDKIAGRRMISGPWGLQETALDATGCACIIDVVDFCCRGHKVTDAVAPVRLFRLAIECIKDTADLKDAGVKLK
TLVDK
>gi|13559809|ref|NP_112021.1| nucleocapsid protein [Nipah virus]
MSDIFEEAASFRSYQSKLGRDGRASAATATLTTKIRIFVPATNSPELRWELTLFALDVIRSPSAAESMKVGAAFTLISMY
SERPGALIRSLLNDPDIEAVIIDVGSMVNGIPVMERRGDKAQEEMEGLMRILKTARDSSKGKTPFVDSRAYGLRITDMST
LVSAVITIEAQIWILIAKAVTAPDTAEESETRRWAKYVQQKRVNPFFALTQQWLTEMRNLLSQSLSVRKFMVEILIEVKK
GGSAKGRAVEIISDIGNYVEETGMAGFFATIRFGLETRYPALALNEFQSDLNTIKSLMLLYREIGPRAPYMVLLEESIQT
KFAPGGYPLLWSFAMGVATTIDRSMGALNINRGYLEPMYFRLGQKSARHHAGGIDQNMANRLGLSSDQVAELAAAVQETS
AGRQESNVQAREAKFAAGGVLIGGSDQDIDEGEEPIEQSGRQSVTFKREMSISSLANSVPSSSVSTSGGTRLTNSLLNLR
SRLAAKAAKEAASSNATDDPAISNRTQGESEKKNNQDLKPAQNDLDFVRADV
>gi|20153369|ref|NP_619701.1| nucleocapsid protein [Groundnut bud necrosis virus]
MSNVKQLTEKKIKELLAGGSADVEIETEDSTPGFSFKAFYDTNKNLEITFTNCLNILKCRKQIFAACKSGKYVFCGKTIV
ATNTDVGPDDWTFKRTEAFIRTKMASMVEKSKNDAAKQEMYNKIMELPLVAAYGLNVPASFDTCALRMMLCIGGPLPLLS
SMTGLAPIIFPLAYYQNVKKEKLGIKNFSTYEQVCKVAKVLSASQIEFKNELEEMFKSAVKLLSESNPGTASSISLKKYD
EQVKYMDKAFSASLSMDDYGEHSKKKSSKAGPSLEL
>gi|20153338|ref|NP_619709.1| nucleocapsid protein [Impatiens necrotic spot virus]
MNKAKITKENIVKLLTQSDSLEFEETQNEGSFNFTDFFTNNREKIQNMTTASCLSFLKNRQSIMRVIKSADFTFGSVTIK
KTRNNSERVGVNDMTFRRLDAMVRVHLVGMIKDNGSALTEAINSLPSHPLIASYGLATTDLKSCVLGVLLGGSLPLIASV
[NAME]
EGLTSIYSMFNATIDFGKNDSI
>gi|22788699|ref|NP_690574.1| nucleocapsid protein [Dugbe virus]
MENQIKANNKKEFDEWFKPFSEKLQLRSNLTNSASLCDRVPDLALAEMKMALATDDKEKDSIFSNALVEATRFCAPIYEC
AWTCSTGVVQKSLSWFDKNKDFIKLWDAKYMDLKKGIPEPEQLVSYQQAAQKWRKDVGYEINQFTRSLTHPVVAEYKVPG
EIAVDVKEMLSDMIRRRNVLLNGDGENAGKKGPISREHVSWGRELAGGKFQVVFNPPWGDINKCGKSGIPLAATAMVKVA
ELDGSKKLEDIRQALLDLKKWVEDNKDALEDGKGNELVQTMTKHLAQAVELSKKSNALRAQGAQIDTPFSAYYWAWSAGV
KPETFFTLSQFLFEMGQSARGGKKMIKALTSTPLRWGKGLINLFADDDFLGNRLYMHPAVLTPGRMSEMGACFGVIPVAS
PEDAILGSGHSKNILNFKIDTSVQNPCASTIVQLYRIQKSGFDLESLEVVSTEHLLHQSFVGKRCPTQNAYKVRGNATNV
NII
>gi|38505524|ref|NP_942553.1| nucleocapsid protein [Dobrava-Belgrade virus]
MATLEELQKEINNHEGQLVIARQKVKDAEKQYEKDPDDLNKRALSDRESIAQSIQGKIDELRRQLADRVAAGKNIGKERD
PTGLDPGDHLKEKSMLSYGNVIDLNHLDIDEPTGQTADWLSIVVYLTSFVVPILLKALYMLTTRGRQTTKDNKGMRIRFK
[NAME]
DLPCKLLSEPSPTSLTKGPSTNRDYLNQRQGALAKMETKEAQAVRKHAIDAGCNLIDHIDSPSSIWVFAGAPDRCPPTCL
FIAGMAELGAFFAVLQDMRNTIMASKTIGTSEEKLKKKSSFYQSYLRRTQSMGIQLDQRIIVLFMVDWGKEAVDSFHLGD
DMDPELRGLAQALIDQKVKEISNQEPLKL
>gi|38505530|ref|NP_942556.1| nucleocapsid protein [Seoul virus]
MATMEEIQREISAHEGQLVIARQKVKDAEKQYEKDPDDLNKRALHDRESVAASIQSKIDELKRQLADRIAAGKNIGQDRD
PTGVEPGDHLKERSALSYGNTLDLNSLDIDEPTGQTADWLTIIVYLTSFVVPIILKALYMLTTRGRQTSKDNKGMRIRFK
DDSSYEDVNGIRKPKHLYVSMPNAQSSMKAEEITPGRFRTAVCGLYPAQIKARNMVSPVMSVVGFLALAKDWTSRIEEWL
GAPCKFMAESPIAGSLSGNPVNRDYIRQRQGALAGMEPKEFQALRQHSKDAGCTLVEHIESPSSIWVFAGAPDRCPPTCL
FVGGMAELGAFFSILQDMRNTIMASKTVGTADEKLRKKSSFYQSYLRRTQSMGIQLDQRIIVMFMVAWGKEAVDNFHLGD
DMDPELRSLAQILIDQKVKEISNQEPMKL
>gi|48696002|ref|YP_025081.1| nucleocapsid protein [Pirital virus]
MASDNVASFRWTQALRRGLSNWTNPVKSDVITDTRALLAALDFDRVAQVQRLMRKDKRTDTDLTKLRDLNKEVDALMNMR
TTQKDNVLRVGGLSKDELMELASDLQKLKKKVLRVEGSGQPGVYAGNLTTTQLEQRSKILRDMGFAQLRGNPSGVVKVWD
IKDSSLLINQFGSMPAVTMACMTEQGGESLNDVVQGLSALGLLYTVKYPNMSDLEKLADQYPCLGYITQEQSQINVSGYN
LSLSAAVKAGACMLDGGNMLETIQVKPTMFSSMIKAVLEVKSKERMFVSEAPGQRNPYENLLYKLCLSGDGWPYIGSRSQ
VKGRAWDNTTVDLTDTGSPNHPPVRNGGSPRLSQLSHAKEEQILEGLKRLDSKATTWIDIEGTPNDPVELAIFQPESGNY
IHCYREPHDVKSFKDQSKYSHGMLLKDLTNTQPGLISFIIKNLPAGIVLTAQGSDDIEKLLEMHARRDISIIDVRLTSEQ
[NAME]
>gi|113200757|ref|YP_717923.1| nucleocapsid protein [Capsicum chlorosis virus]
MSTVRQLTEKKIRELLAGGTADVEIETDDSTPGFSFKAFYDSNKSVEMTFTNCLNILKCRKQIFAACKSGKYKFCDKTIV
STAADVGPDDWTFKRTEALIRVKMINMIEKNKNEAAKQEMYSKVMELPLVAAYGLNIPASFDSCALRMMLCIGGPLPLLS
SIKGLAPIIFPLAYYQNVKKEKLGIKNFSTYEQVCKVAKVLSASQVEFKEDLDKLFKQAVKLLSESNPGTASSISLKKYD
EQVKYMDKVFSANLSVDDYGEHSKKSSKPSTSIEV
>gi|157939568|ref|YP_001497161.1| nucleocapsid [Akabane virus]
MANQFIFNDVPQRNAATFNPDAGYVAFISKYGQQLNFTVARVFFLNQKKAKMVLHKTPQPSVDLTFAGVKFTVVNNHFPQ
YTANPVSDTAFTLHRISGYLARWVAEQCKANQIKFAEAAATIVMPLAEVKGCTWSDGYAMYLGFAPGAEMFLETFEFYPL
VIDMHRVIKDGMDVNFMRKVLRQRYGQLTAEEWMTSKLDAVKAAFGSVAQISWAKSGFSPAARAFLAQFGIQI
>gi|164682563|ref|YP_001649209.1| nucleocapsid protein [[NAME] virus]
MANSKEIPSFRWTQALRRELGSFTEPTKGSVLKDAKLIADSLDFTQVSQVQRLLRKTKRTDADLDKLRDLNKEVDKLMSM
KSAQRNTVLKVGDLGKDELMDLASDLEKLKRKIGERPNGGPRLYMGNLSQSQLDKRSDILRSLGFQQQRGPNQGIVRLWD
VSDPSKLNNQFGSMPALTIACMTVQGGETMNNVVQALTSLGLLYTVKYPNLDDLEKLTVEHDCLQIITRDESALNISGYN
FSLSAATKAGASLIDGGNMLETIKVTPDNFSSIIMATLKVKKREGMFVDEKPGNRNPYENLLYKLCLSGEGWPYIGSRSQ
IVGRSWDNTSVDLNTKPTVGPRGPERNGQNMRLSNLSELQEAIVREAMQKLDPSNTIWMDIEGPPTDPVELAVLQPSTGY
YIHCYRKPHDEKGFKNGSRHSHGILLKDLEDAQPGLLSYIIGLLPQNTVITVQGADDIKRLFDIHGRKDLKLVDVRLTGE
QSRIFEQEVWERYGELCKAHNGVIVPKKKHKDNGPQKEPHCALLDCIMFQSVLDGHLPELSLKPLLPGSLVYQARNAFVM
>gi|164682566|ref|YP_001649220.1| nucleocapsid protein [Allpahuayo virus]
MSSENVPSFRWTQSLRRGLSNWTHAVKGDVLADARAIVSALDFHQVAQVQRMMRKDKRSEADLTRLRDMNKEVDALMMMR
SAQKDNILKVGGLSKDELMELASDLDKLRKKVQRTEGGGQPGVYAGNLTSSQLNQRSEILKMMGMGTGPRGPVGGVVKVW
DIKDSSLLVNQFGSMPALTIACMTQQGGEQMNDVVQALTSLGLVYTVKYPNLSDLEKLTEKHPCLKLITQEPAQINISGY
NLSLSAAVKADACMIDGGNMLETLQVKPSMFSTLIKTILEVKNREGMFVSPSPGQRNPYENILYKVCLSGDGWPYIGSRS
QIKGRAWENTTVDLEGKPSVNHPPVRNGGSPDLKQIPKTKEDEVIRAIEQLDPRGTTWVDIEGPPGDPVELALFQPETGN
YLHCYRRPHNENAFKDQSKFSHGLLLKDLADTQPGLISCIIRHLPNNMVLTAQGNDDIIKLLEMHGRRDIKVLDVKLSSD
QARLMEDVVWERYNMLCVKHTGLVIKKKKKGAAPGSANPHCALLDCIMFDATVTGYLRDQKPKRLLPLDTLYRDNANLIN
L
>gi|164607210|ref|YP_001649227.1| nucleocapsid protein [Bear Canyon virus]
MSDQVVHSFRWTQSLRRGLSNWTCPVKADVLNDTRALLSGLDFAKVASVQRMMRRDKRDESDLTSLRDLNKEVDSLMTMK
STQKNMFLKVGSLSKGELMELSGDLNKLKDKVQRTERPPGSGGQYQGNLTTTQLTRRGELLQFIGIQKAGRVGMNGVVKV
WDVKDSSLMINQFGSMPALTISCMAEQGGETLNDVVQGLTDLGLLYTAKYPNLNDLEALSEKHPCLKVITQEESQINISG
YNLSLSAAVKAGACLIDGGNMLETIKIDTSTFTTVIKTLLEVKARERMFVSSVPGQRNPYENILYKLCLSGEGWPYIASR
SQIKGRAWDNTVVEFDSAPPRAPVPVRNGGAPLLGPLRPELEDQVRKGVEGLSPNLTTWIDIEGPPNDPVELAIYQPETQ
[NAME]
EQSRVFEELVWKKFEHLCDRHKGIVIKSKKKGSKPASTNAHCALMDCIMFNAVLVGFVADEKPKRLLPIDILFREPDTTV
VL
>gi|188531119|ref|YP_001911114.1| nucleocapsid protein [Whitewater Arroyo virus]
MSDQSVPSFRWTQSLRRGLSAWTTSVKADVLNDTRALLSGLDFAKVASVQRMMRRVKRDDSDLVGLRDLNKEVDSLMIMK
SNQKNMFLKVGSLSKDELMELSSDLEKLKQKVQRTERVGNGTGQYQGNLSNTQLTRRSEILQLVGIQRAGLAPTGGVVKI
[NAME]
YNLSLSAAVKAGACLIDGGNMLETIKIEESTFTTVIKTLLEVKNKEKMFVSPTPGQRNPYENVLYKLCLSGDGWPYIASR
SQIKGRAWDNTVVEFDTATVKEPIPIRNGGAPLLTTLKPEIENQVKRSVESLLINDTTWIDIEGPPNDPVEFAIYQPESQ
RYIHCYRRPNDIKSFKDQSKYCHGILLKDVENARPGLISSIIRSLPKSMVFTAQGADDIRKLFDMHGRQDLKIVDVKLSA
EESRIFEDLVWKRFEHLCDKHKGIVIKSKKKGSTPATTNAHCALLDGVMFSAVISGSVSNEKPKRMLPIDLLFREPETTV
VL
>gi|189026270|ref|YP_001936020.1| nucleocapsid protein [Flexal virus]
MSDSNIPAFRWTQALRRGLSNWTQTVKADVIKDAKAIMSALDFNQVAQVQRMMRKDKRSEADLTRLRDMNKEVDALMTMR
SVQRDVVLKIGGLSKDELLELSSDLEKLRKKVMRAEGSSTPGVYQGNLTTSQLQQRADLLKLVGMKPLQQSRGGVVKVWD
VKDSSLMINQFGSMPALTIACMTEQGGEQMNDVVQGLTALGLVYTVKFPNLDDLEKLTEQHPCLKLITQEQSQINISGYN
LSLSAAVKAGACMIDGGNMLETIKVSPSMFSTLIKTVLQVKNREGMFIGNAGPQRNPYENLLYKICLSGEGWPYIGSRSQ
VSGRAWDNTSIDIEGKPSPNHPPVRNGGTPQINPLSRDQEDQVKGAVRLLDPKVTTWVDIEGPPGDLVEFAIFQPNSGKY
LHCYRRPHNEQSFKDQSKFSHGLLLKDLESAQPGLVSAIIRALPEGMVLTAQGSDDIEKLFLMHGRRDLKVVDVALTSEQ
ARVYEDTVWERFNPLCKKHKGLVIKKKKKGAAPTSTNAHCALLDCIMFDATITGYIADAKPQQLLPIDLLYRTENLIHL
>gi|189026276|ref|YP_001936022.1| nucleocapsid protein [Latino virus]
MSGASEVPSFRWTQSLRRGLSHFTTSAKGDVLRDAKSLVDGLDFNQVSQVQRVMRKDKRSDDDLSKLRDLNRSVDSLMVM
KNKQNNVSLKIGSLSKDELMDLATDLEKLKRKINLGDRQGPGVYQGNLTSAQLEKRSEILKSLGFQPRANQNGVVKVWDI
KNPKLLINQFGSIPALTIACMSVQGAEQMNDVVQGLTSLGLLYTVKYPNLDDLNKLSKDHPCLEFITKEESANNISGYNL
SLSAAVKAGACLVDGGNMLETILVKPDNFQDIVKSLLVIKRQEKMFVNEKPGLRNPYENILYKLCLSGEGWPYIGSRSQI
VGRAWENTTVDLSKEVVYGPSAPVKNGGNMRLSPLSDTQEAVIKEAIGKLDMDETIWIDIEGPPNDPVELAIYQPSTGNY
IHCFRVPHDEKGFKNGSKYSHGILLRDIENARSGLLSRILMRLPQKVVFTCQGSDDIQKLLQMNGRPDIATIDMSFSSEQ
ARFFEGVVWEKFGHLCTRHNGVVLSRKKKGGNSGEPHCALLDCIIFQAAFEGQVTGQIPKPLLPNSLIFKDEPRVAM
>gi|9635148|ref|NP_057954.1| nucleocapsid protein [Northern cereal mosaic virus]
MANEHKSPLDKRVTDLFKDIPTDISTHLITGETFSNESFQAIPVYTLTNVTVKQAVHLSYKLFESMKTTKCAAGYQYAIY
LLAQRLLTPAAGSNDLVFKDYIPQGGSDLPQEIKNKIYVTTELSDSQTAGKSEAEKKKATADLIFGDNTDHDLQQVRSQD
DETIIRFGSFISAFLMKLIVKQQSNIVDGWNGMLERYTNFYGESPITAVPKPNADWLAGLKNYLISDPKIGHTWVRVISA
AENALSVGDKSFQMVRYLASLPLSLTGMHAYKLFLEVQKQSNLGMQWLLEEMVSPKTLPALEGIAKILKNFESRTSTRKP
PYFRYARIMSPAYFQELQTKNCPELVYLLVCLLQKYEAFGAGQEPTKIVGIERVPANIRAEMSRAAGYIFSVAPQRNMGM
YSDSMRKALVHQEKASTSRAGKEKADEVFGM
>gi|256535776|ref|YP_003126908.1| nucleocapsid protein [Drosophila melanogaster sigma virus AP30]
MEQTRLYHIDTKTEFVVRTPEFTSPVEYPFTWFTNNKTKPLFKISVMADCSLETARVAALEFLMGEKVPPSHVIDYIYEF
CKTMTQELDTNWESYGQVIGKKGDTVTPLSLLHIMISQDTRKYTPKNPRLLTDEVDIYLVGNLLCSYRYNKTHEKMQTAY
GTKVASILAPFSTHDTQNIRIATFLTNSKSLVDHPNFEIMASAIDMFLERFPSHGMGKLRFGTIGLRYQGCSGLVDLTYL
KQILKKPGLADAIKWLFAGCLVSEVFQMMINHQDEIDVKHSYFPYMIGFKISNKSPFSAGSNPSIHTLVHLIGSLLGSPR
SINAIMIEYGVISDIVVNAAIVFFAHRSDIGAKVRFGERGVMNEIHQEEDAARQRKRSAAAGGLPAVQPTDPRGWLAEYQ
DRDYKFTQSEVDDLNKVIQGIPQVRAGTVGEWVKLNFISNLPKGFDVTRV
>gi|52627081|ref|YP_089666.1| nucleocapsid protein [Sabia virus]
MSNSKEIPSFRWTQSLRRGLSEFTTPVKTDVLRDAKMILDGLDFNQVSLVQRILRKSKRNDGDLDKLRDLNKEVDNLMSM
KSSQRDTILKLGDLNKSELMDLASDLEKLKRKVGQTERSASGGVYLGNLSQSQLTKRSDLLRKLGFQQQQVRSPGVVRIW
DVADPNRLNNQFGSVPALTIACMTKQSDNTMGDVVQALTSLGLLYTVKFPNLIDLEKLTAEHDCLQIVTKDESGLNISGY
NYSLSAAVKAGATLLDGGNMLETIRITPDNFSQIIKTTLSIKKKEGMFVDEKPGNRNPYENLLYKICLSGEGWPYIGSRS
QIKGRSWENTTVDLSTKPQQGPRTPEKAGQNIRLSHLTELQESVVREAMGKIDPTLTTWIDIEGTSNDPVELALYQPDTG
NYILCYRKPHDEKGFKNGSRHSHGMLLKDLESAQPGLLSYVIGLLPQNMVLTTQGSDDIRRLVDTHGRKDLKIVDIKLAS
[NAME]
TI
>gi|9630646|ref|NP_047201.1| nucleocapsid protein N [Canine distemper virus]
MASLLKSLTLFKRTRDQPPLASGSGGAIRGIKHVIIVLIPGDSSIVTRSRLLDRLVRLVGDPKINGPKLTGILISILSLF
VESPGQLIQRIIDDPDVSIKLVEVIPSINSACGLTFASRGASLDSEADEFFKIVDEGSKAQGQLGWLENKDIVDIEVDNA
EQFNILLASILAQIWILLAKAVTAPDTAADSEMRRWIKYTQQRRVVGEFRMNKIWLDIVRNRIAEDLSLRRFMVALILDI
KRSPGNKPRIAEMICDIDNYIVEAGLASFILTIKFGIETMYPALGLHEFSGELTTIESLMMLYQQMGETAPYMVILENSV
QNKFSAGSYPLLWSYAMGVGVELENSMGGLNFGRSYFDPAYFRLGQEMVRRSAGKVSSALAAELGITKEEAQLVSEIASK
TTEDRTIRATGPKQSQITFLHSERSEVANQQPPTINKRSENQGGDKYPIHFSDERLPGYTPDVNSSEWSESRYDTQIIQD
DGNDDDRKSMEAIAKMRMLTKMLSQPGTSEDNSPVYSDKELLN
>gi|9633478|ref|NP_050580.1| nucleocapsid protein [Snakehead rhabdovirus]
MAFQKEFFGLRDVKVDLSAGEGLDFDPSEVELTVYRTGADTDGNTIIKALAAVGGPKTNEALSVLLAFVTLGTDQDEYET
RIKILKEIGFSVKEVPMAKDASSGIEAPLENVAALVKPETVYQVIRGVLYTCALFVKYNVEKMQKYIKNKLPALATSYGV
PELEEFPTESSALKKLASCIRPGQRITNALYAFLLVEMARPETQQGARALAAMRINGTGMTMVGLFTQAAKNLGATPSDL
LEDLCMRSLVDSARRIVRLMVQVSQAETIQARYAVMMSRMLNENYFKAYGLNDNSRISAILVAVNGHFSEDTIEALEGIK
VSAEFADLARRIAIALIEKYDNASDGGEGASEIIKSAVRGSSGAFKGSRGKPQGRRQEASGEGDLDSEDDDDQDYSKYA
>gi|9633480|ref|NP_050582.1| matrix protein [Snakehead rhabdovirus]
MPFIRRPKRAILIPPLHLTLKDDDKVLVVETVGTLIISGMTPSNLTEKLGLAMKLASAILGGDSHPAFNPLVEIFSGAME
FGASVEKLDFMTRENKVITTYKVARGKAVALSNFPMEKRVGEKSYTTQIRNGSITYTGSFLFSAEHVGLKDNRSLFAAGE
GLRESPDMAQAREAFAGSLPKGKNESSRK
>gi|11545727|ref|NP_071466.1| nucleocapsid protein [Newcastle disease virus B1]
MSSVFDEYEQLLAAQTRPNGAHGGGEKGSTLKVDVPVFTLNSDDPEDRWSFVVFCLRIAVSEDANKPLRQGALISLLCSH
SQVMRNHVALAGKQNEATLAVLEIDGFANGTPQFNNRSGVSEERAQRFAMIAGSLPRACSNGTPFVTAGAEDDAPEDITD
TLERILSIQAQVWVTVAKAMTAYETADESETRRINKYMQQGRVQKKYILYPVCRSTIQLTIRQSLAVRIFLVSELKRGRN
TAGGTSTYYNLVGDVDSYIRNTGLTAFFLTLKYGINTKTSALALSSLSGDIQKMKQLMRLYRMKGDNAPYMTLLGDSDQM
SFAPAEYAQLYSFAMGMASVLDKGTGKYQFAKDFMSTSFWRLGVEYAQAQGSSINEDMAAELKLTPAARRGLAAAAQRVS
EVTSSIDMPTQQVGVLTGLSEGGSQALQGGSNRSQGQPEAGDGETQFLDLMRAVANSMREAPNSAQGTPQSGPPPTPGPS
QDNDTDWGY
>gi|17158069|ref|NP_478339.1| nucleocapsid protein [Australian bat lyssavirus]
MESDKIAFKINNQLVSVKPEVIVDQYEYKYPAIKDQRKPSITLGKAPDLNKAYKSILSGMNAAKLDPDDVCSYLAAAMEL
FEGICPEDWTSYGILIARKGDKITPATLVDIRRTDIQGSWALAGGQDFTRDPTIAEHASLVGLLLSLYRLSKISGQNTGN
YKTNIADRIEQIFETAPFAKIVEHHTLMTTHKMCANWSTIPNFRFLAGTYDMFFSRVEHLYSAIRVGTVVTAYEDCSGLV
SFTGFIKQINLTAREAILYFFHKNFEEEIRRMFEPGQETAVPHSYFIHFRSLGLSGKSPYSSNAVGHVFNLIHFVGCYMG
QIRSLNATVISTCAPHEMSVLGGYLGEEFFGKGTFERRFFRDEKELQDYEAAEAMKIDLALADDGTVNSYDEDYLSGETR
SPEAVYTRIMMNGGRLKKSHIRRYISVSSNHQSRPNSFAEFLNKTYSSDS
>gi|22003843|ref|NP_665864.1| nucleocapsid protein [Tioman virus]
MSSVFRAFELFTLEQEQQELGNDIEIPPETLRSNIKVCILNSQDPQTRHDMMCFCLRLIASNSARAAHKTGAILTLLNLP
TAMMQNHIRIADRSPDADIERIEVDGFEPGTYRLRPNARTPLTNGEITALSLMANDLPDTYTNDTPFTNHRAEGENCDET
EQFLNAIYSVLVQLWVTVCKCMTAHDQPTGSDERRLAKYQQQGRLDQKYALQPELRRQIQACIRGSLTIRQFLTYELQTA
RKQGAITGRYYAMVGDIGKYIDNAGMSAFFMTMRFALGTRWPPLALSAFSGELLKLKSLMQLYRNLGEKARYMALLEMPE
MMEFAPANYPLCYSYAMGIGSVQDPMMRNYTFARPFLNPAYFQLGVETANRQQGSVDKSMAEELGLTEEERRDMSATVTR
LTTGRGAGQAQDMINIMGARQAAGGRGAQGRALRIVEEDETTDDESVDDQADDIQGRPLPPVPAPIREIDWEARIAEIEE
QGQRMRDQGVGRLVDNQAPNVQNTRQNTQDNQALLDLDI
>gi|32563516|ref|NP_872273.1| nucleocapsid protein [Goose paramyxovirus SF02]
MSSVFDEYEQLLAAQTRPNGTHGGGEKGSTLKVEVPVFTLNSDDPEDRWNFAVFCLRIAVSEDANKPLRQGALISLLCSH
SQVMRNHVALAGKQNEATLAVLEIDGFANSVPQFNNRSGVSEERAQRFMVIAGSLPRACSNGTPFVTAGVEDDAPEDITD
TLERILSIQVQVWVTVAKAMTAYETADESETRRINKYMQQGRVQKKYILHPVCRSAIQLTIRHSLAVRIFLVSELKRGRN
TAGGSSTYYNLVGDVDSYIRNTGLTAFFLTLKYGINTKTSALALSSLTGDIQKMKQLMRLYRMKGENAPYMTLLGDSDQM
SFAPAEYAQLYSFAMGMASVLDKGTGKYQFARDFMSTSFWRLGVEYAQAQGSSINEDMAAELKLTPAARRGLAAAAQRVS
EEIGSMDIPTQQAGVLTGLSDEGPRTPQGGSNKPQGQPDAGDGETQFLDFMRAVANSMREAPNPAQSTTHPEPPPTPGAS
QDNDTDWGY
>gi|34365540|ref|NP_899211.1| nucleocapsid protein [[NAME] virus]
MAHSKEIPSFRWTQSLRRELGMFTEPTKSSVLNDAKLIADSLDFTQVSQVQRLLRKSKRGDTDLDKLRDLNKEVDRLMSM
KSVQNNTVLKVGDLGKDELMDLASDLEKLKKKIGDRESNSPRMYMGNLTQSQLEKRAGILRTLGFQQQRGAAGGVVRLWD
VSDPSKLNNQFGSMPALTIACMTVQGGETMNNVVQALTSLGLLYTVKYPNLDDLEKLTLEHDCLQIITKDESALNISGYN
FSLSAAVKAGASLIDGGNMLETIKVTPNNFSSIVKAALNVKRREGMFIDERPGNRNPYENLLYKLCLSGEGWPYIGSRSQ
ILGRSWDNTSVDLNARPVTGPRAPEKNGQNIRLSNLSEMQEAIVKEAMRKLDSSDTIWMDIEGPPTDPVELAVFQPSSGN
YVHCFRKPHDEKGFKNGSRHSHGILLKDLEDAQPGLLSYVIGLLPQGSVITVQGADDIKKLFDIHGRKDLKLVDVRLTGE
QSRIFEQEVWEKFGHLCRAHNGVIVPKKKNKEANSTKEPHCALLDCIMFQSVLDGHLPDTIPIQLLPNTLVFQAKSAFVM
>gi|34365534|ref|NP_899213.1| nucleocapsid protein [Machupo virus]
MAHSKEIPSFRWTQSLRRGLSQFTHTVKTDVLKDAKLIADSIDFNQVSQVQRALRKNKRGEEDLNKLRDLNKEVDRLMSM
KSIQKNTIFKIGDLGRDELMELASDLEKLKNKIKRTESGPQGLYMGNLSQLQLTKRSEILKTLGFQQQRGAGNGVVRIWD
VSDPSKLNNQFGSMPALTIACMTVQGGETMNSVVQALTSLGLLYTVKYPNLNDLDKLTLEHECLQIVTKDESSINISGYN
FSLSAAVKAGASILDGGNMLETIRVTPDNFSSLIKSTLQVKRKEGMFIDEKPGNRNPYENLLYKLCLSGDGWPYIGSRSQ
ILGRSWDNTSVDLTKKPQVGPRQPEKNGQNLRLANLTEMQEAVIKEAVKKLDPTNTLWLDIEGPPTDPVELALYQPANKH
YIHCFRKPHDEKGFKNGSRHSHGILMQDIEDAMPGVLSYVIGLLPQDMVITTQGSDDIRKLLDIHGRKDLKLVDVKLTSD
QARLYDQQIWEKFGHLCKHHNGVVVNKKKREKDSPFKLSSGEPHCALLDCIMYQSVMDGKMVDEEPVALLPLSLLFLPKA
AFAL
>gi|188572143|ref|YP_001911116.1| nucleocapsid protein [Tamiami virus]
MSDQSVPSFRWVQSLRRGLSAWTTPVKADVLNDTRALLSGLDFSKVASVQRMMRREKRDDNDLTNLRDLNKEVDSLMTMR
SSQKNMFLKVGSLSKDELMELSSDLNKLKEKVQRSERISGSSGVYQGNLTTTQLTRRSEILQLVGIQRPGLNRRGGVVKI
WDIKEPEHSLINQFGSTPAVTISCMAEQGGETLNDVVARPNRSVGYFTQQSFLIWVTWRALSSKHSCLKVITQEESQINI
SGFNLSLSAAVKAGACLVDGGNMLETIKVEESTFTTIIKTLLEIKSKERMFVDITPGQRNPYENLLYKLCLSGEGWPYIA
SRSQIKGRAWDNTVIEFDVSPRKPPVPIRNGGSPVLTTLKPEVEEQIKRSIESLSVHDTTWIDIEGPPFDPVEMAIYQPD
SLKYIHCYRKPNDVKSFKDQSKYCHGILLKDIEYCSSLALYQPSLRHLPKSMVFTAQGSEDIRRLFDMHGRQDLKIVDVK
FTAEQSRVFEELTWKRFEHLCDKHKGIVIKSKKKGTTPASTNAHCALMDCIMFSGVLLGAIPNDKPRRLLPLDILFREPD
TTVVL
>gi|189043028|ref|YP_001936018.1| nucleocapsid protein [Parana virus]
MSEKQVPSFRWTQALRRGLSNWTEPVKVDVIKDARAIISALDFNQVAQVQRIMRKEKRTDSDLTRLRDMNKEVDALMSMR
STQHNVVLRAGGLSKDELLELSADLEKLRKKVIRAEGGNPGVYQGNLTATQLNQRAELMKLVGMGPGLRSGNGVVRVWDV
KDSSLMINQFGSMPALTIACMTEQGGETMNDVVQGLSALGLVYTVKFPNLDDLEKLSEQHPCLKSITQEQSQINISGYNL
SLSAAVKAGACMIDGGNMLETIKMSPPMFSSIIKAVLQVKNREQMFVGSVGVQRNPYENLLYKLCLSGEGWPYIGSRSQI
VGRAWDNTLIDLEGKPAVSPPPVKNGGPINLSPLSKGQEDLINQAVQKLSPKETTWIDIEGPAGDPVELAIYQPESGNYL
HCYRAPHNESAFKDQSRYSHGLLLKDLKAARPGLISAIIKALPKGMVLTAQGSDDIEQLILMHGRRDIKVVDVKLTSEHA
RVFEDPVWDRFNPLCEKHTGLVIKKKKKGAPPSSTNPHCALMDCIMFDATVTGYIRDVKPRQLIPIDLLFKDDLNLINL
>gi|9630558|ref|NP_047106.1| nucleocapsid [Hendra virus]
MSDIFDEAASFRSYQSKLGRDGRASAATATLTTKIRIFVPATNSPELRWELTLFALDVIRSPSAAESMKIGAAFTLISMY
SERPGALIRSLLNDPDIEAVIIDVGSMLNGIPVMERRGDKAQEEMEGLMRILKTARESSKGKTPFVDSRAYGLRITDMST
LVSAVITIEAQIWILIAKAVTAPDTAEESETRRWAKYVQQKRVNPFFALTQQWLTEMRNLLSQSLSVRKFMVEILMEVKK
GGSAKGRAVEIISDIGNYVEETGMAGFFATIRFGLETRYPALALNEFQSDLNTIKGLMLLYREIGPRAPYMVLLEESIQT
KFAPGGYPLLWSFAMGVATTIDRSMGALNINRGYLEPMYFRLGQKSARHHAGGIDQNMANKLGLNSDQVAELAAAVQETS
VGRQDNNMQAREAKFAAGGVLVGGGEQDIDEEEEPIEHSGRQSVTFKREMSMSSLADSVPSSSVSTSGGTRLTNSLLNLR
SRLAAKAIKESTAQSSSERNPPNNRPQADSGRKDDQEPKPAQNDLDFVRADV
>gi|34365531|ref|NP_899219.1| nucleocapsid protein [Junin virus]
MAHSKEVPSFRWTQSLRRGLSQFTQTVKSDVLKDAKLIADSIDFNQVAQVQRALRKTKKGEEDLNKLRDLNKEVDRLMSM
RSVQRNTVFKVGDLGRDELMELASDLEKLKNKIRRAETGSQGVYMGNLSQSQLAKRSEILRTLGFQQQGTGGNGVVRIWD
[NAME]
FSLSAAVKAGASILDGGNMLETIRVTPENFSSLIKSTIQVKRREGMFIDEKPGNRNPYENLLYKLCLSGDGWPYIGSRSQ
ITGRSWDNTSIDLTRKPVAGPRQPEKNGQNLRLANLTEIQEAVIREAVGKLDPTNTLWLDIEGPATDPVEMALFQPAGKQ
YIHCFRKPHDEKGFKNGSRHSHGILMKDIEDAMPGVLSYVIGLLPPDMVVTTQGSDDIRKLFDLHGRRDLKLVDVKLTSE
[NAME]
AYAL
>gi|56699503|ref|YP_170706.1| nucleocapsid protein [Mopeia Lassa reassortant 29]
MSASKEIKSFLWTQSLRRELSGYCSNIKLQVVKDAQALLHGLDFSEVSNVQRLMRKERRDDNDLKRLRDLNQAVNNLVEL
KSTQQKSILRVGTLTSDDLLILAADLEKLKSKVIRTERPLSAGVYMGNLSSQQLDQRRALLNMIGMSGGNQGARAGRDGV
[NAME]
ISGYNFSLGAAVKAGACMLDGGNMLETIKVSPQTMDGILKSILKVKKALGMFISDTPGERNPYENILYKICLSGDGWPYI
ASRTSITGRAWENTVVDLESDGKPQKADSNNSSKSLQSAGFTAGLTYSQLMTLKDAMLQLDPNAKTWMDIEGRPEDPVEI
ALYQPSSGCYIHFFREPTDLKQFKQDAKYSHGIDVTDLFATQPGLTSAVIDALPRNMVITCQGSDDIRKLLESQGRKDIK
LIDIDLSKTDSRKYENAVWDQYKDLCHMHTGVVVEKKKRGGKEEITPHCALMDCIMFDAAVSGGLNTSVLRAVLPRDMVF
RTSTPRVVL
>gi|56699509|ref|YP_170710.1| nucleocapsid protein [Mopeia virus AN20410]
MSNSKEVKSFLWTQSLRRELSGYCSNIKIQVIKDAQALLHGLDFSEVANVQRLMRKEKRDDSDLKRLRDLNQAVNNLVEL
KSVQQKNVLRVGTLTSDDLLVLAADLDRLKAKVIRGERPLAAGVYMGNLTAQQLEQRRVLLQMVGMGGGFRAGNTLGDGI
VRVWDVRNPELLNNQFGTMPSLTIACMCKQGQADLNDVIQSLSDLGLVYTAKYPNMSDLDKLSQTHPILGIIEPKKSAIN
ISGYNFSLSAAVKAGACLIDGGNMLETIKVTKSNLEGILKAALKVKRSLGMFVSDTPGERNPYENLLYKLCLSGEGWPYI
ASRTSIVGRAWDNTTVDLSGDVQQNAKPDKGNSNRLAQAQGMPAGLTYSQTMELKDSMLQLDPNAKTWIDIEGRPEDPVE
IAIYQPNNGQYIHFYREPTDIKQFKQDSKHSHGIDIQDLFSVQPGLTSAVIESLPKNMVLSCQGADDIRKLLDSQNRRDI
KLIDVSMQKDDARKFEDKIWDEYKHLCRMHTGIVTQKKKRGGKEEVTPHCALLDCLMFEAAVIGSPQIPTPRPVLSRDLV
FRTGPPRVVL
>gi|66508428|ref|YP_238528.1| nucleocapsid protein [Tupaia virus]
MSLSRLYSKKTQSSYNATAPLDRDPPEYPGDAFKKSRNKPTLTRPKSNLSLDDARCMIKGQIQNGSVDIELAKHYLILVL
EQITEDNSDDWTSFGVQILSRTERGRPLCMVNIQLDDKDKTFDSQVKDSTATVEDDLWMTTYLLAIYRIGRATNKNYQTQ
LIDELNKLLATFPGDYVPMVQALQAFDSWPNDPNYCKLVACVDMFFSRFKKSKWAILRFGTISSRYRDCAALTALNHFSR
LLGVDLVDALEWSFVGRVSDEIEQMLKPDQELDKVDSYTPYMIDLGISKASPYSTVRNPAWHLFCHTVGSLMMSRRSINA
RHLEAPDQSNILSNAELIVFVFETRIKWLKNFRKLDSVDASDQLDQVAPVVLGTKDLPNTTNADDWFSWMKLNNFELPDE
CGRYVSKLAKKLKDSREGSVGQFVYLRLGD
>gi|77124338|ref|YP_338075.1| nucleocapsid protein [J-virus]
MSKLNKVLDEFRDFKNNPPKKVGPVTALQGFKKNVVVPVPMMKDTVKRFHFITFCLQLVWSDLSSGAFITGAFLALLSIF
AENPAAMLRSLLNDPDIDVQLAEIADIDNDKLKLATRGKEMSRYENDMMRMASAGPSKGASPYPYVRQEYQELCPKSTEE
LQLCVQSITTQLWILLTKAVTAIDTARDSEKKRWGKFLQQRRALEEYQLVDAWLDRARVRVASDLAIRRYMITILLETGK
MTGPKPRVVELIADIGNYISETGMAGFFLTIKYGIETKYPVLAMSEFAADLATVLSLMKMYTTLGEKAPYMVILEESIQT
KFAPGNYPILWSYAMGVASVLDRSVSNLNYTRPYLENAFFRLGESMVQNMGFTVNKAVAEDLGFSEEQVAAVREILKSEN
ANMSNGPQGPKANQSSTKSLDIKNADSIIPESDDETDAPEDVKARLDAEKEASRKKREASMRKRQSKQDKSRADSTIRDI
EDELNDIISKTKNLSSKPKGSSNTTDTPKQSDEMSDLSAING
>gi|82712720|ref|YP_415508.1| nucleocapsid protein [Menangle virus]
MSSVFRAFELFTLEQEQNEHGNDIELPPETLRTNIKVCTLNNQEPQARHDMMCFCLRLIASNSARAAHKTGAILTLLSLP
TAMMQNHLRIADRSPDADIERLEIDGFEPGTFRLRANARTPMTNGEVTALNLMAQDLPDTYSNDTPFLNPNTETEQCDEM
EQFLNAIYSVLVQVWVTVCKCMTAHDQPTGSDERRLAKYQQQGRLDQRYALQPELRRQIQTCIRSSLTIRQFLTHELQTA
RKQGAITGKYYAMVGDIGKYIDNAGMSAFFMTMRFALGTKWPPLALAAFSGELLKLKSLMQLYRSLGDRARYMALLEMSE
MMEFAPANYPLCYSYAMGIGSVQDPMMRNYTFARPFLNPAYFQLGVETANRQQGSVDKAMAAELGLTEDEKRDMSAAVTR
LTTGRGGNQAQELINVMGARQGRDQGRRGNRDYDVVEENEETESDSDNDEEQEIQNRPLPPIPQMPQNIDWEVRLAEIER
RNQQMAARDRPQAVVTADVHQEPADARVDEQDMLLDLDM
>gi|73852953|ref|YP_308667.1| nucleocapsid protein [Influenza A virus (A/Goose/Guangdong/1/96(H5N1))]
MASQGTKRSYEQMETGGERQNATEIRASVGRMVGGIGRFYIQMCTELKLSDYEGRLIQNSITIERMVLSAFDERRNKYLE
EHPSAGKDPKKTGGPIYRRRDGKWVRELILYDKEEIRRIWRQANNGEDATAGLTHMMIWHSNLNDATYQRTRALVRTGMD
PRMCSLMQGSTLPRRSGAAGAAVKGVGTMVMELIRMIKRGINDRNFWRGENGRRTRIAYERMCNILKGKFQTAAQRAMMD
QVRESRNPGNAEIEDLIFLARSALILRGSVAHKSCLPACVYGLAVASGYDFEREGYSLVGIDPFRLLQNSQVFSLIRPNE
NPAHKSQLVWMACHSAAFEDLRVSSFIRGTRVAPRGQLSTRGVQIASNENMETMDSSTLELRSRYWAIRTRSGGNTNQQR
ASAGQISVQPTFSVQRNLPFERATIMAAFTGNTEGRTSDMRTEIIRMMESSRPEDVSFQGRGVFELSDEKATNPIVPSFD
MSNEGSYFFGDNAEEYDN
>gi|56900717|ref|YP_173326.1| nucleocapsid protein [Pneumonia virus of mice [NAME]
MSLDRLKLNDVSNKDSLLSNCKYSVTRSTGDVTSVSGHAMQKALARTLGMFLLTAFNRCEEVAEIGLQYAMSLLGRDDSI
KILREAGYNVKCVDTQLKDFTIKLQGKEYKIQVLDIVGIDAANLADLEIQARGVVAKELKTGARLPDNQRHDAPDCGVIV
LCIAALVVSKLAAGDRGGLDAVERRALNVLKAEKARYPNMEVKQIAESFYDLFERKPYYIDVFITFGLAQSSVKGGSKVE
[NAME]
TSVVLGNAAGLGIIGSYKGAPRNRELFDAAKDYAERLKDNNVINYSALNLTAEERELISQQLNIVDDTPDDDI
>gi|238890539|ref|YP_002929491.1| nucleocapsid protein [Lujo virus]
MSQSKEVKSFLWLQTLRRELSPFCTDVRAKVVKDAVSLINGLDFSMVSDVQRLMRKDKRNDEDLMKLRELNQTVDGLVDL
KSSNKKNRVGVGKLTSDELMILATDLEKLKKKVTRTEARGPGVYRGNLSQDQLGRRSELLNMIGMGTPRPTRNTVVRVWD
VKDSSLLNNQFGTMPSLTLACLTRQTRVDLNDSVQACVDLGLIYTAKFPNMDDLDKLKNKHPVLDYVSNCDSAINISGYN
LSLASLVKAGASLMKGGDMLETIELNSRNIDDVIKATLTARNKVQMFVSEVPGERNPYENLLYKICLSGEGWPYISSRTS
IKGRSWDNTVIDMTPKDPTPPQNERAKAPHQFPVGVSFSQSQLLDDIMKNLNPKGRTWMDIEGRPDDPVEIAIFQPEERL
CLHFYREPTDQKQFKNDSKYCHGMDFTQLCSTQPGLTTAVLERLPLGMVITCQGKDDIEKLLHSQGRRDVKFIDIQMSKE
ASRKFEDQVWDSYKTFCNQHTGIVVTKSKKGKKEITPHCALMDCIMYESAVNGQLYQEPIRNLLPADMIFRTAAKLSL
>gi|15081568|ref|NP_150057.1| nucleocapsid protein [Avian paramyxovirus 6]
MSSVFTDYAKLQDALVAPSKRKVDSAPSGLLRVGIPVCVLLSEDPEERWSFVCFCMRWVVSDSATEAMRVGAMLSILSAH
[NAME]
SELLNMVYSVATQIWVAAMKSMTAPDTSSESEGRRLAKYIQQNRVIRSTILAPATRGECTRIIRSSLVIRHFLITEIKRA
TSMGSNTTRYYATVGDAAAYFKNAGMAAFFLTLRFGIGTKYSTLAVSALSADMKKLQSLIRVYQSKGEDGPYMAFLEDSD
LMSFAPGNYPLMYSYAMGVGSILEASIARYQFARSFMNDTFYRLGVETAQRNQGSLDENLAKELQLSGAERRAVQELVTS
LDLAGEAPVPQRQPTFLNDQEYEDDPPARRQRIEDTPDDDGASQAPPTPGAGLTPYSDNASGLDI
>gi|55775698|ref|YP_138511.1| nucleocapsid protein [Parainfluenza virus 5]
MSSVLKAYERFTLTQELQDQSEEGTIPPTTLKPVIRVFILTSNNPELRSRLLLFCLRIVLSNGARDSHRFGALLTMFSLP
SATMLNHVKLADQSPEADIERVEIDGFEEGSFRLIPNARSGMSRGEINAYAALAEDLPDTLNHATPFVDSEVEGTAWDEI
ETFLDMCYSVLMQAWIVTCKCMTAPDQPAASIEKRLQKYRQQGRINPRYLLQPEARRIIQNVIRKGMVVRHFLTFELQLA
RAQSLVSNRYYAMVGDVGKYIENCGMGGFFLTLKYALGTRWPTLALAAFSGELTKLKSLMALYQTLGEQARYLALLESPH
LMDFAAANYPLLYSYAMGIGYVLDVNMRNYAFSRSYMNKTYFQLGMETARKQQGAVDMRMAEDLGLTQAERTEMANTLAK
LTTANRGADTRGGVNPFSSVTGTTQVPAAATGDTLESYMAADRLRQRYADAGTHDDEMPPLEEEEEDDTSAGPRTGPTLE
[NAME]
>gi|55733702|ref|YP_138528.1| nucleocapsid protein [[NAME]]
MATMEELQREINAHEGQLVIARQKVRDAEKQYEKDPDELNKRTLTDREGVAASIQAKIDELKRQLADRIATGKNLGKEQD
PTGVEPGDHLKERSKLSYGNVLDLNHLDIDEPTGQTADWLSIVIYLTSFVVPILLKALYMLTTRGRQTTKDNKGTRIRFK
DDSSFEDVNGIRKPKHLYVSLANAQSSMKAEEITPGRYRTAICGLYPAQIKARQMISPVMSVIGFLALAKDWSDRIEQWL
[NAME]
FIAGIAELGAFFSILQDMRNTIMASKTVGTSEEKLRKKSSFYQSYLRRTQSMGIQLDQRIIVLFMVAWGKEAVDNFHLGG
DMDPELRTLAQSLIDVKVKEISNQEPLKL
>gi|9634969|ref|NP_054690.1| nucleocapsid protein [[NAME] paramyxovirus]
MADLFSKVNDFQKYRTNLGRQGGLTVKLVGVRSTVVVLVPSTKDHRLRWKLIRLLTLAVYNDSLPDSISIGALLSLLAIS
FEQPAAVIRGLLSDPDLEVQMIEVSLDDQGEIRFAARGDILTRYKDAYFEKIRDFPNPDDDLAIFEDPELGDYSDITQDE
YQAMITTITIQLWILLTKAVTAPDTAHDSEQRRFIKYLQQRKAYAAFKFTTIFTERVRRKIAQSLSIRKFMVSIMLEVRK
SGSAKGRISECIADVSAYIEEAGLSGFILTLKYGIGTRFPVLALNAFQSDLSVIRNLIDLYKSMGTIAPFMVLIEDATQV
KFAPGNYSLLWSFAMGVGTALDHAMNNLNINRDYLEPSYFRLGQEVVRLSESTVDRSMAQELGIDPTSEDLIMRAVQAAG
VGSRDPDAARRTGRFQVADIQIDEGPVDLATEAEDQTTKDNEQRIKVPDPRGSIGQSNAQFQPPKPQLRGRVMPPERKPT
DQQKNLQDQRPRPSATPRRLTKDAEDNIDQLFAQYDSGVAAPEDVTLVTSDSTSPARSSGTGSDMDLINQSP
>gi|41057594|ref|NP_958048.1| nucleocapsid protein [[NAME] virus]
MSGVLSALREFKDARLASKGEGLTRGAITGIKQKIAVIIPGQEGSKVRWQLLRLLLGVIWSQEASPGVITGAFLSLISLI
SESPGNMVRRLNNDPDLAITIIEFTIGPDSEYKFASRGMSYEEQMAHYLHLRDTPPQSAPDDFPFEESEAWRQDDMPMDE
FLVANMTVQVQLWTLLIKAVTAPDTARDGEQRRWLKFVQQRRVESFYKLHTVWMDRARMHIAASLSIRRYMVKTLIEIQR
MGQGKGRLLEVIADIGNYIEESGLAGFQLTIRFGIETKYAALALNEFQGDIATIERLMKLYLELGPTAPFMVLLEDSIQT
RFAPGNYPLLWSYAMGVGSALDRAMANLNFNRSYLDYGYFRLGYRIVRQSEGSVDTRMARELGITDEEQQRLRRLVADLG
NRGDSEAAAYQGGAFQLANIQDFENDDAFAANPQQAPRNNRNRRRRGQPDQGDDDDSDEGDDQGGSGYAAAVHAVLHSSG
DGGDDLTSGADGSIDPPTSGLGANYRYSPGLNDSKPKFNDADLLGLGD
>gi|14336455|ref|NP_116744.1| nucleocapsid protein [Spring viraemia of carp virus]
MSVIRIKTNATVAAVLPASEDQADYPSTFFEGGNEIRLYVNKEEKLDVLRQYVYMGLVEKNCKIQHVNAYLYAVLKGERE
LLEADWDSFGHKIGIQGEKIGPFNLVRVEDIPDGLPDGKLNAEVSAEDDAWLPLFLLGLYRVGRASETTYRTLLMESLIK
QCKAIKSDWVSPVTATHKYFDVWGNDGNYLKIVACVDMFYNHFKKSIKATFRWGTIVSRFKDCAALATLGHVVKITGLTI
EEVFTWVLQTEVAEELVKMMKPGQEIDNSASYMPYLIDMGISAKSPYSTIKNPSFHFWGQLVAALCRSKRALNARQPDEI
DSMSISNASLLMAYALGSSPDIEQQFSTGDTYRKPPKEASYLVSEEPKSRSVVEWIAWYSDVDNKPTDDMLMMAKRVAGT
ISGPRDNSVGKWIKQTYG
>gi|34610115|ref|NP_919030.1| nucleocapsid protein [Hirame rhabdovirus]
MANLKEEFAGLRGVKGGALEDSGTEYDPTKINLTLYGTDKLYTLAIIKRAVSQVGGSQTNKALGILCAFVTSENNPDMTD
AAVKLLVDMRFKVDVVPVDDRLGDNLDDPNSKLAEVLTEENMVDLVKGLLFTCALMVKYDVDKMATYCQQKLERLANSQG
[NAME]
LLEDLCMKSIIDSARRIVKLMRIVADVEDMTAKYAIMMSRMLGDGYFKSYGINENSRITCILMNINEQYDEGTTGGLAGV
RVSPPFRKLATEIARLLVKKYDGNGSAGPGASDLVRQAEQAAQETEGEDDKYDEEGEEDGGEGEGGEDEEYY
>gi|9695416|ref|NP_054707.1| nucleocapsid protein [Mumps virus]
MSSVLKAFERFTIEQELQDRGEEGSIPPETLKSAVKVFVINTPNPTTRYHMLNFCLRIICSQNARASHRVGALITLFSLP
[NAME]
EQFLDRCYSVLIQAWVMVCKCMTAYDQPAGSADRRFAKYQQQGRLEARYMLQPEAQRLIQTAIRKSLVVRQYLTFELQLA
RRQGLLSNRYYAMVGDIGKYIENSGLTAFFLTLKYALGTKWSPLSLAAFTGELTKLRSLMMLYRDLGEQARYLALLEAPQ
IMDFAPGGYPLIFSYAMGVGTVLDVQMRNYTYARPFLNGYYFQIGVETARRQQGTVDNRVADDLGLTPEQRTEVTQLIDR
LARGRGAGIPGGPVNPFVPPVQQQQPAAAYEDIPALEESDDDGDEDGGAGFQNGAQAPAARQGGQNDFRVQPLQDPIQAQ
LFMPLYPQVSNIPNHQNHQINRIGGMEHQDLLRYNENGDSQQDARGEHGNTFPNNPNQNAQSQVGDWDE
>gi|38707563|ref|NP_945024.1| nucleocapsid protein [Dolphin morbillivirus]
MATLLRSLALFKRNKDRTPLIAGSGGAIRGIKHVIVVPVPGDSSIVTRSRLLDRLVRLAGDPYISGPKLTGVMISILSLF
VESPSQLIQRITDDPDVSIRLVEVIQSEKSLSGLTFASRGANMEDEADDYFSIQAGEEGDTRGTHWFENKEIVEIEVQDP
EEFNILLASILAQIWILLAKAVTAPDTAADSETRRWIKYTQQRRVVGEFRLDKGWLDAVRNRIAEDLSLRRFMVALILDI
KRTPGNKPRIAEMICDIDTYIVEAGLASFILTIKFGIETMYPALGLHEFSGELTTVESLMNLYQQMGETAPYMVILENSI
QNKFSAGSYPLLWSYAMGVGVELENSMGGLNFGRSYFDPAYFRLGQEMVRRSAGKVSSSLAAELGITAEDAKLVSEIAAQ
ANDDRANRAIGPKQNQISFLHPDRGDASTPGNILRANEGDGSTRMKRGGNIATPKGTSIDQTSTTLSKDTLDIDEQSDNT
DDPISIQKSAEALAKMRAMAKLLENQGPRDVTAHVYNDKDLLG
>gi|54310709|ref|YP_133821.1| nucleocapsid protein [Peste-des-petits-ruminants virus]
MATLLKSLALFKRNKDKAPTASGSGGAIRGIKNVIIVPIPGDSSIITRSRLLDRLVRLAGDPDINGSKLTGVMISMLSLF
VESPGQLIQRITDDPDVSIRLVEVVQSTRSQSGLTFASRGADLDNEADMYFSTEGPSSGGKKRINWFENREIIDIEVQDP
EEFNMLLASILAQVWILLAKAVTAPDTAADSELRRWVKYTQQRRVIGEFRLDKGWLDAVRNRIAEDLSLRRFMVSLILDI
KRTPGNKPRIAEMICDIDNYIVEAGLASFILTIKFGIETMYPALGLHEFAGELSTIESLMNLYQQLGEVAPYMVILENSI
QNKFSAGAYPLLWSYAMGVGVGLENSMGGLNFGRSYFDPAYFRLGQEMVRRSAGKVSSVIAAELGITAEEAKLVSEIASQ
AGDERTARGTGPRQAQVSFLQHKTGEGESSAPATREGVKAAIPNGSEERDRKQTRSGRPRGETPSQLLLEIMPEDEVSRE
SGQNPREAQRSAEALFRLQAMAKILEDQEEGEDNSQVYNDKDLLG
>gi|83659772|ref|YP_425087.1| nucleocapsid protein [Lettuce necrotic yellows virus]
MTTSAEKLAKLEQLRKERAAVIQKPTTQVSSEPVVTEKPRVRNTAYDSLAGVTIGKRASRKWSDADIKSIPIYDVHQVPA
AQVIALGKDLLTQIQNNSVNTVTVDYCLVLAVSIPKPAMTSFEHLLTPPSPEQGTRLDFTQPQAGVSNRSGLTAIEKMTL
NATRKNLLTETDEEKRARYEAIIKKMEDQEAGLGTSKATVVTSETEAAAYGFLAATLLKLYAKSTESYVAGLAQIRNRFA
AWYDCPKAVLDAFQPTEAALVSLRAAFARRPEVLSTWTLWVAVNENRTPGLLVTQQGLLNYLACQQFAYPGMHAYTLLIE
IHEHTGMKFSDLLVEMDCPATRAGVREALELIRDYEITKDHPKRTTYFRYARNWDPKYFGALQSTECKTLVYVAASVSKK
VSAQGANGDPMEIFAIKNLDATIKARLDPVAENMAGKILDQMLMDEMSGASWATKASTQ
>gi|9627220|ref|NP_056871.1| nucleocapsid protein [Sendai virus]
MAGLLSTFDTFSSRRSESINKSGGGAVIPGQRSTVSVFVLGPSVTDDADKLSIATTFLAHSLDTDKQHSQRGGFLVSLLA
MAYSSPELYLTTNGVNADVKYVIYNIEKDPKRTKTDGFIVKTRDMEYERTTEWLFGPMVNKSPLFQGQRDAADPDTLLQI
YGYPACLGAIIVQVWIVLVKAITSSAGLRKGFFNRLEAFRQDGTVKGALVFTGETVEGIGSVMRSQQSLVSLMVETLVTM
NTARSDLTTLEKNIQIVGNYIRDAGLASFMNTIKYGVETKMAALTLSNLRPDINKLRSLIDTYLSKGPRAPFICILKDPV
HGEFAPGNYPALWSYAMGVAVVQNKAMQQYVTGRTYLDMEMFLLGQAVAKDAESKISSALEDELGVTDTAKERLRHHLAN
LSGGDGAYHKPTGGGAIEVALDNADIDLEPEAHTDQDARGWGGDSGDRWARSMGSGHFITLHGAERLEEETNDEDVSDIE
RRIARRLAERRQEDATTHEDEGRNNGVDHDEEDDAAAAAGMGGI
>gi|9626946|ref|NP_056918.1| nucleocapsid protein [Measles virus]
MATLLRSLALFKRNKDKPPITSGSGGAIRGIKHIIIVPIPGDSSITTRSRLLDRLVRLIGNPDVSGPKLTGALIGILSLF
VESPGQLIQRITDDPDVSIRLLEVVQSDQSQSGLTFASRGTNMEDEADQYFSHDDPSSSDQSRSGWFENKEISDIEVQDP
EGFNMILGTILAQIWVLLAKAVTAPDTAADSELRRWIKYTQQRRVVGEFRLERKWLDVVRNRIAEDLSLRRFMVALILDI
KRTPGNKPRIAEMICDIDTYIVEAGLASFILTIKFGIETMYPALGLHEFAGELSTLESLMNLYQQMGETAPYMVILENSI
QNKFSAGSYPLLWSYAMGVGVELENSMGGLNFGRSYFDPAYFRLGQEMVRRSAGKVSSTLASELGITAEDARLVSEIAMH
TTEDRISRAVGPRQAQVSFLHGDQSENELPGLGGKEDRRVKQGRGEARESYRETGSSRASDARAAHPPTSMPLDIDTASE
SGQDPQDSRRSADALLRLQAMAGILEEQGSDTDTPRVYNDRDLLD
>gi|9627230|ref|NP_041712.1| nucleocapsid (N) protein [Vesicular stomatitis Indiana virus]
MSVTVKRIIDNTVIVPKLPANEDPVEYPADYFRKSKEIPLYINTTKSLSDLRGYVYQGLKSGNVSIIHVNSYLYGALKDI
RGKLDKDWSSFGINIGKAGDTIGIFDLVSLKALDGVLPDGVSDASRTSADDKWLPLYLLGLYRVGRTQMPEYRKKLMDGL
TNQCKMINEQFEPLVPEGRDIFDVWGNDSNYTKIVAAVDMFFHMFKKHECASFRYGTIVSRFKDCAALATFGHLCKITGM
STEDVTTWILNREVADEMVQMMLPGQEIDKADSYMPYLIDFGLSSKSPYSSVKNPAFHFWGQLTALLLRSTRARNARQPD
DIEYTSLTTAGLLYAYAVGSSADLAQQFCVGDNKYTPDDSTGGLTTNAPPQGRDVVEWLGWFEDQNRKPTPDMMQYAKRA
VMSLQGLREKTIGKYAKSEFDK
>gi|328545956|ref|YP_004347994.1| nucleocapsid [Candiru virus]
MSYEKLAVDIAGHEIDADTIKAWVQAFAYQGFDAKRVMELLVERGGDDWVEDAKQMIILCLTRGNKPSKMMVKMSEKGKK
IVQALVKRYSLKEGNPSRDDLTLSRVTAALAGYTCQATEYVEEFLPVTGKNMDDLSKNYPRAMMHPSFAGLIDPKLPPDV
[NAME]
RGLK
>gi|330464828|ref|YP_004382744.1| nucleocapsid [Sandfly Sicilian Turkey virus]
MDEYQKIAVEFGEQAIDEAVIQDWLQAFAYQGFDARTIIQNLVQLGGKSWEEDAKKMIILSLTRGNKPKKMVERMSPEGA
REVKSLVAKYKIVEGRPGRNGITLSRVAAALAGWTVQAVEVVENFLPVPGSTMDRMCGQTYPRQMMHPSFAGLIDPSLDQ
EDFNAVLDAHKLFLLMFSKTINVSLRGAQKRDIEESFSQPMLAAINSSFIDNTQRRAFLTKFGILTSGARATAVVKKIAE
AYRKLE
>gi|332290588|ref|YP_004421857.1| nucleocapsid protein [Groundnut ringspot and [NAME] chlorotic spot virus reassortant]
MSKVKLTKENIVSLLTQSEDVEFEEDQNQVAFNFKTFCQENLDLIKKMSITSCLTFLKNRQSIMKVVNQSDFTFGKVTIK
KNSERVGAKDMTFRRLDSMIRVKLIEETANNENLAIIKAKIASHPLVQAYGLPLADAKSVRLAIMLGGSIPLIASVDSFE
MISVVLAIYQDAKYKELGIEPTKYNTKEALGKVCTVLKSKGFTMDDAQINKGKEYAKILSSCNPNAKGSIAMDYYSDNLD
KFYEMFGVKKEAKIAGVA
>gi|330850814|ref|YP_004414705.1| nucleocapsid [Aguacate virus]
MADFERLAIEFSEAGVNIADVVNWVNEFAYQGFDAKRVLELLQQRGGSSWQEDARKMIVLALTRGNKIEKMILKMSEEGK
KTVLALKKKYQLKSGNPGRDDLTLSRVAAALAGWTCQALPHVENFLPVTGEAMDALSPGFPRCLMHPSFAGLVDTTLPPE
TQDAILAAHSLFLVQFSKVINPSLRGKPKGEVVASFKQPMLAAVNGGFIGPDKRRKMLQSLGVVDVNGVPSEAVKVAANK
FRSSQ
>gi|9632390|ref|NP_049361.1| nucleocapsid protein [[NAME] spotted wilt virus]
MSKVKLTKESIVALLTQGKDLEFEEDQNLVAFNFKTFCLENIDQIKKMSVISCLTFLKNRQSIMKVIKQSDFTFGKITIK
KTSDRIGGTDMTFRRLDSLIRVRLVEETGNSENLNTIKSKIASHPLIQAYGLPLDDAKSVRLAIMLGGSLPLIASVDSFE
MISVVLAIYQDAKYKDLGIDPKKYDTKEALGKVCTVLKSKAFEMNEDQVKKGKEYAAILSSSNPNAKGSVAMEHYSETLN
KFYEMFGVKKQAKLAELA
>gi|354459082|ref|YP_004927965.1| nucleocapsid protein [Potato yellow dwarf virus]
[NAME]
ESIIGEIFRVAAHIKKVEDKTSRIIGSFAPPTARGVVTKTGLDTAPIVFGQSVTVGADITVQNTAPTVRTTDAGDAVVSA
PYLCMALLRLMTKPVESFNRSLTTIRTSYGRFYGMQSAEVTNFSAPLNSLQQLSTGLDTYPTCNSTMAWMMGFAEGSILR
NNKNHGFMRFLIFQHAEMRGMQIYKMILTALAGLPAITPAQFLRAIEIPDAVKAIKTVMKIATTLDKPGRQDPTYWWKYG
KYIEPSYFVDLSVGRNTKFAYLMACILNEMSLINGPEYANPKNIKALESIKNNIELTNYYEGLSRNFSILYRSLETESGI
GIGIAMQMGGAPAPKARAQKRANEEAPPAAQKRATPAAQQDQQAAGTSGTASATPVDAMNAALQSGVLDQLP
>gi|19744950|ref|NP_604471.1| nucleocapsid protein [Andes virus]
MSTLQELQENITAHEQQLVTARQKLKDAEKAVEVDPDDVNKSTLQSRRAAVSTLETKLGELKRQLADLVAAQKLATKPVD
PTGLEPDDHLKEKSSLRYGNVLDVNSIDLEEPSGQTADWKAIGAYILGFAIPIILKALYMLSTRGRQTVKDNKGTRIRFK
DDSSFEEVNGIRKPKHLYVSMPTAQSTMKAEEITPGRFRTIACGLFPAQVKARNIISPVMGVIGFGFFVKDWMDRIEEFL
AAECPFLPKPKVASEAFMSTNKMYFLNRQRQVNESKVQDIIDLIDHAETESATLFTEIATPHSVWVFACAPDRCPPTALY
VAGVPELGAFFSILQDMRNTIMASKSVGTAEEKLKKKSAFYQSYLRRTQSMGIQLDQKIIILYMLSWGKEAVNHFHLGDD
MDPELRQLAQSLIDTKVKEISNQEPLKL
>gi|38371721|ref|NP_941984.1| nucleocapsid protein [Puumala virus]
MSDLTDIQEDITRHEQQLIVARQKLKDAERAVEVDPDDVNKNTLQARQQTVSALEDKLADYKRRMADAVSRKKMDTKPTD
PTGIEPDDHLKERSSLRYGNVLDVNAIDIEEPSGQTADWYTIGVYVIGFTLPIILKALYMLSTRGRQTVKENKGTRIRFK
DDTSFEDINGIRRPKHLYVSMPTAQSTMKAEELTPGRFRTIVCGLFPTQIQVRNIMSPVMGVIGFSFFVKDWSERIREFM
EKECPFIKPEVKPGTPAQEIEMLKRNKIYFMQRQDVLDKNHVADIDKLIDYAASGDPTSPDNIDSPNAPWVFACAPDRCP
PTCIYVAGMAELGAFFSILQDMRNTIMASKTVGTAEEKLKKKSSFYQSYLRRTQSMGIQLDQRIILLFMLEWGKEMVDHF
HLGDDMDPELRGLAQALIDQKVKEISNQEPLKI
>gi|356460852|ref|YP_004928153.1| nucleocapsid protein [[NAME] virus]
MSQLKEIQEEITRHEQQIVIARQKLKDAEKTVEADPDDVNKSTLQSRRAAVSALEDKLADFKRQLADLVSSQKMGEKPVD
PTGLEPDDHLKERSSLRYGNVLDVNAIDIDEPSGQTADWFSIGQYITGFALAIILKALYMLSTRGRQTIKENKGTRIRFK
DDSSYEEINGIRRPKHLYVSMPTAQSTMKADELTPGRFRTIVCGLFPAQIMHRNIISPVMGVIGFSFFVKDWPEKIEEFL
IKPCPFLKKSGPSKEEDFLVSNDAYLLGREKALRESHLAEIDDLIDLAASGDPTPPDSIKSPQAPWVFACRPDRCPPTCI
YIAGMAELGAFFSILQDMRNTIMASKTVGTAEEKLKKKSSFYQSYLRRTQSMGIQLDQRIILLFMTEWGSDIVNHFHLGD
DMDPELRTLAQSLIDQKVKEISNQEPLKI