Spreadsheet: 12bc20f0-6104-4909-8056-bbf83e642850
Sheet: Sheet1

Locus | In vivo growth | Metabolic? | In automodel? | automodel rxns | Initial model | GapFill | GrowMatch
MG001 |  | N
MG002 | G | N
MG003 |  | N
MG004 |  | N
MG005 |  |  | Y | SERTRS | Y
MG006 |  |  | Y | DTMPK, URIDK3 | Y
MG007 |  | N
MG008
MG009 | G | N
MG010 | G | N
MG011 | G
MG012 | G
[NAME] |  |  | Y | MTHFD, MTHFC | Y
MG014
MG015
MG018 | G | N
MG019 |  | N
MG020
MG021 |  |  | Y | METTRS | Y
MG022 |  | N
MG023 |  |  | Y | FBA, FBA2, INSCR | Y
MG024 | G
MG025 |  |  | Y | TECA4S_BS | Y
MG026 |  |  | Y | PROTSYN_Hin | P
MG027 |  | N
MG028
MG029
MG030 |  |  | Y | UPPRT | Y
MG031 |  | N
MG032 | G
MG033 | G |  |  |  | Y
MG034 |  |  |  |  | Y
MG035 |  |  | Y | HISTRS | Y
MG036 |  |  | Y | ASPTRS | Y
MG037 |  |  |  |  |  | ADDED
MG038 |  |  | Y | GLYK | Y
[NAME] | G
[NAME] | G
MG041 |  |  |  |  | Y ADD GPR
MG042 |  |  |  |  | Y ADD GPR
[NAME] |  |  |  |  | Y ADD GPR
MG044 |  |  | Y | SPMDabc, PTRCabc | Y
MG045
[NAME]
MG047 |  |  | Y | METAT | Y
MG048 |  | N
MG049 |  |  | Y | PUNP3, PUNP6, PUNP4, PUNP1, [NAME], PUNP7, PUNP2 | Y
MG050 |  |  | Y | DRPAr | Y
MG051 | G |  | Y | DURIPP, PYNP1r, TMDPP, PYNP2 | Y
[NAME] |  |  | Y | CYTD, DCYTD | Y
MG053 |  |  | Y | PMANM | Y
MG054 |  | N
[NAME] |  | N
MG473 |  |  |  |  | P
MG474
MG056 | G
MG057 |  | N
MG058 |  |  | Y | PRPPS | Y
MG059 |  | N
MG060
MG061 | G
MG062 | G |  | Y | FRUpts | Y
MG063 | G |  | Y | F1PK | Y
MG064
[NAME]
[NAME] | G |  | Y | TKT1, TKT2 | Y
MG067 | G
MG068
MG069 |  |  | Y | GLCpts | Y
MG070 |  |  | Y | PROTSYN_Hin, PROTSYN_Eco | P
MG071 |  |  | Y | CA2abc1 | Y
MG072 |  | N
MG073 |  | N
MG074
MG075 |  |  | Y | TEICH45 | Y
MG076
MG077 |  |  | Y | NIabc | Y ADD GRP for DIPEP
[NAME] |  |  | Y | DIPEPabc3, DIPEPabc7, DIPEPabc11, DIPEPabc1, [NAME], DIPEPabc9, DIPEPabc4, DIPEPabc2, DIPEPabc12, DIPEPabc13, DIPEPabc8, DIPEPabc15, DIPEPabc5, DIPEPabc6, DIPEPabc14 | Y
MG079 |  |  | Y | NIabc | Y ADD GRP for DIPEP
MG080 |  |  |  |  | Y ADD GPR
MG081 |  |  | Y | PROTSYN_Hin, PROTSYN_Eco | P
MG082 |  |  | Y | PROTSYN_Hin, PROTSYN_Eco | P
MG083 |  |  | Y | PROTSYN_Hin | P
MG084
MG085
MG086 |  | N
MG087 |  |  | Y | PROTSYN_Hin, PROTSYN_Eco | P
MG088 |  |  | Y | PROTSYN_Hin, PROTSYN_Eco | P
[NAME] |  |  | Y | PROTSYN_Eco | P
MG090 |  |  |  |  | P
MG091 |  | N
MG092 |  |  | Y | PROTSYN_Hin, PROTSYN_Eco | P
MG093 |  |  |  |  | P
[NAME] |  | N
MG095
MG096 | G
[NAME] |  | N
[NAME] |  |  |  |  |  | ADDED
MG099 |  |  |  |  |  | ADDED
MG100 |  |  |  |  |  | ADDED
MG101
MG102 |  |  | Y | TRDR | Y
MG103 | G
MG476
MG104 |  | N
MG105
MG106 |  |  |  |  | P
MG107 |  |  | Y | GK2, GK1, DGK1 | Y
MG108
MG109
MG110 | G
MG111 |  |  | Y | G6PI, PGI | Y
[NAME] | G |  | Y | RPE | Y
MG113 |  |  | Y | ASNTRS | Y
[NAME] | G |  | Y | PGSA_EC | Y (renamed CDGPT)
[NAME] | G | N
MG116 | G
[NAME]
MG118 |  |  | Y | UAG4E, UDPG4E | Y
MG119 |  |  | Y | GALabc | Y
MG120
MG121 | G
MG122 |  | N
MG123
[NAME] |  |  |  |  | Y
MG125
MG126 |  |  | Y | TRPTRS | Y
MG127
MG128 |  |  |  |  |  | ADDED
MG129
MG130
[NAME] | G
MG132
MG133
[NAME] | G
MG135
MG136 |  |  | Y | LYSTRS | Y
MG137 |  |  | Y | UDPGALM | Y
MG138 | G |  | Y | PROTSYN_Eco | P |  | removed
MG139
[NAME] | G
MG141 |  | N
MG477
MG142 |  |  | Y | PROTSYN_Hin | P
MG143 |  | N
MG144
MG145 |  |  | Y | FMNATr, RBFK | Y
[NAME]
[NAME]
MG148
MG149 | G
MG478
MG150 |  |  | Y | PROTSYN_Hin, PROTSYN_Eco | P
MG151 |  |  | Y | PROTSYN_Hin, PROTSYN_Eco | P
MG152 |  |  | Y | PROTSYN_Hin, PROTSYN_Eco | P
MG153 |  |  |  |  | P
MG154 |  |  | Y | PROTSYN_Hin, PROTSYN_Eco | P
MG155 |  |  | Y | PROTSYN_Hin, PROTSYN_Eco | P
[NAME] |  |  | Y | PROTSYN_Hin, PROTSYN_Eco | P
[NAME] |  |  | Y | PROTSYN_Hin, PROTSYN_Eco | P
MG158 |  |  | Y | PROTSYN_Hin, PROTSYN_Eco | P
[NAME] |  |  |  |  | P
[NAME] |  |  |  |  | P
MG161 |  |  | Y | PROTSYN_Hin, PROTSYN_Eco | P
[NAME] |  |  |  |  | P
MG163 |  |  | Y | PROTSYN_Hin, PROTSYN_Eco | P
MG164 |  |  |  |  | P
MG165 |  |  | Y | PROTSYN_Hin, PROTSYN_Eco | P
MG166 |  |  | Y | PROTSYN_Hin, PROTSYN_Eco | P
MG167 |  |  |  |  | P
[NAME] |  |  | Y | PROTSYN_Hin, PROTSYN_Eco | P
MG169 |  |  | Y | PROTSYN_Hin, PROTSYN_Eco | P
MG170 |  | N
MG171 |  |  | Y | ADK1, DADK, ADK2 | Y
[NAME] |  |  |  |  | P
MG173 |  |  | Y | PROTSYN_Hin | P
[NAME] |  |  |  |  | P
MG175 |  |  | Y | PROTSYN_Hin, PROTSYN_Eco | P
MG176 |  |  | Y | PROTSYN_Hin, PROTSYN_Eco | P
MG177 |  | N
MG178 |  |  | Y | PROTSYN_Hin, PROTSYN_Eco | P
MG179 |  |  | Y | Coabc | Y
MG180 |  |  | Y | Coabc | Y
MG181 |  |  |  |  | Y ADD GPR
MG182
MG183 | G
MG184 |  | N
MG185 | G
MG186
MG187 |  |  | Y | GLYC3Pabc | Y
MG188 |  |  | Y | GLYC3Pabc | Y
MG189 |  |  |  |  | Y ADD GPR with above
MG190
MG191 |  | N
MG192 |  | N
[NAME] |  |  | Y | PHETRS | Y
MG195 |  |  |  |  | Y ADD GRP with above
[NAME] |  |  | Y | PROTSYN_Eco | P
MG197 |  |  |  |  | P
[NAME] |  |  | Y | PROTSYN_Hin, PROTSYN_Eco | P
MG199 |  | N
MG200 |  | N
MG201 |  | N
MG202
MG203 |  | N
MG204 |  | N
MG205 |  | N
MG206
MG207 | G
MG208
MG209 |  |  | Y | PSUDS | Y
MG210 | G | N
[NAME]
[NAME] |  |  |  |  | P
MG211
MG482 |  |  |  |  | Y
MG212 |  |  | Y | AGPAT | Y
MG213 | G | N
MG214 | G | N
MG215 |  |  | Y | PFK | Y
MG216 |  |  | Y | PYK | Y
MG217 |  | N
MG218 |  | N
MG491
MG219
MG220 | G
MG221 |  | N
MG222
MG223
MG224 |  | N
[NAME]
MG226 | G |  | Y | PTRCORNt7, PTRCt2 | Y
MG227 | G |  | Y | TMDS | Y
MG228 |  |  | Y | DHFR, DHFOR2, [NAME] | Y
MG229 |  |  |  |  | Y ADD GPR
MG230 |  |  |  |  | Y ADD GPR
MG231 |  |  | Y | RNDR3 | Y
[NAME] |  |  |  |  | P
MG233
[NAME] |  |  | Y | PROTSYN_Hin, PROTSYN_Eco | P
[NAME] |  | N
[NAME]
MG237 | G |  | Y | BUTKr | removed
MG238 | G | N
MG239 |  | N
MG240 |  |  | Y | NNATr, NMNATr | Y
MG241
MG242
MG243
[NAME] | G | N
MG245
MG246
MG247
MG248 | G
MG249 |  | N
MG250 |  | N
MG251 |  |  | Y | GLYTRS | Y
MG252 | G
MG253 |  |  | Y | CYSTRS | Y
MG254 |  |  | Y | NADDP | removed
MG255 | G
MG494
MG256 | G
MG257 |  |  |  |  | P
MG258 |  |  | Y | PROTSYN_Hin | P
MG259 |  |  |  |  |  | ADDED
MG260 | G |  | Y | G3PD4 | Y
[NAME] |  | N
MG262 |  | N
MG498 | G | N
MG263
MG264 | G
MG265
MG266 |  |  | Y | LEUTRS | Y
[NAME]
MG268 | G
MG269 | G
MG270
MG271 | G |  | Y | AKGD | Y
MG272
MG273 |  |  | Y | PDH | Y
MG274 |  |  |  |  | Y ADD GPR
MG275 |  |  | Y | NADH5 | Y
MG276 |  |  | Y | ADPT | Y
MG277
MG278 |  |  | Y | GTPDPK | removed
MG279 | G
MG280 | G
MG281 | G |  | Y | THRD_L | removed
MG282 |  | N
MG283 |  |  | Y | PROTRS | Y
[NAME] | G
MG285 | G
[NAME] | G
MG287
MG288 | G
MG289 | G
MG290 | G
MG291 | G
[NAME]
[NAME] |  |  | Y | ALATRS | Y
MG293 | G
MG294 | G
MG295
MG296
MG297 |  | N
MG298 | G | N
MG299 |  |  | Y | PTAr, PBUTT, PTA2r | Y
MG300 |  |  | Y | PGK | Y
MG301 |  |  | Y | GAPD | Y
[NAME] |  |  |  |  | Y ADD GRP with below |  | removed
MG303 |  |  | Y | Coabc | Y |  | removed
MG304 |  |  | Y | Coabc | Y |  | removed
MG305 |  | N
MG306
[NAME]
[NAME] |  | N
MG309
MG310
MG311 |  |  | Y | PROTSYN_Hin, PROTSYN_Eco | P
[NAME] |  | N
MG313
MG314
MG315 | G | N
MG316 | G
MG317 |  | N
MG318 |  | N
MG319
MG320
MG321
MG322
MG323 |  |  | Y | Kt2i | Y
MG515
[NAME]
MG325 |  |  |  |  | P
MG326
MG327
MG328 | G
MG329
MG330 |  |  | Y | URIDK1, CYTK1, CYTK2, URIDK2 | Y
[NAME]
[NAME]
MG333
MG334 |  |  | Y | VALTRS | Y
[NAME]
MG516
MG517
MG336
MG337
MG338
MG339 | G | N
MG340 |  | N
MG341 |  | N
MG342
MG343 | G
MG344
MG345 |  |  | Y | ILETRS | Y
MG346 | G
MG347
MG348
MG349
MG350
[NAME]
MG351 |  |  |  |  | Y
MG352 | G | N
MG353
MG354
MG355 | G | N
MG356 |  |  | Y | CHOLK | Y
MG357 |  |  | Y | PPAK, ACKr | Y
MG358 | G | N
MG359 | G | N
MG360 | G | N
MG361 |  |  |  |  | P
MG362 |  |  | Y | PROTSYN_Hin, PROTSYN_Eco | P
MG363 |  |  |  |  | P
MG522 |  |  |  |  | P
MG364
MG365 |  |  |  |  | Y
[NAME]
MG367 | G | N
MG368
MG369
MG370 | G |  | Y | PSUDS | Y
MG371
MG372 |  |  | Y | THZPSN | Y
[NAME]
MG374
MG375 |  |  | Y | THRTRS | Y
MG376
MG377
[NAME] |  |  |  |  | Y
MG379 |  | N
MG380 | G | N
MG381
MG382 |  |  | Y | URIK2, [NAME], CYTDK3, CYTDK1, URIK1, URIK3 | Y
MG383 |  |  | Y | NADS1 | Y
MG384 |  |  |  |  | Y
MG524
[NAME] | G
[NAME] |  | N
MG387
MG388
MG389
[NAME] | G
MG391
MG392 |  | N
MG393 |  | N
MG394 |  |  | Y | GHMT | Y
[NAME]
MG396 |  |  | Y | RPI | Y
MG397 | G
MG398 | G |  |  |  | Y
[NAME] |  |  | Y | ATPS4r | Y
MG400 |  |  | Y | ATPS4, [NAME] | Y
MG401 |  |  | Y | ATPS4, [NAME] | Y
[NAME] |  |  |  |  | Y
MG403 |  |  | Y | ATPS4r | Y
MG404 |  |  | Y | ATPSm | Y
MG405 |  |  | Y | ATPS4, [NAME] | Y
MG406
MG407 |  |  | Y | ENO | Y
MG408 | G |  | Y | METSR-S1, METSR-S2 | Y
MG409
MG410 | G |  | Y | PIabc | Y
MG411 | G |  | Y | PIabc | Y
MG412 | G
MG414 | G
MG525 | G
MG417 |  |  | Y | PROTSYN_Hin, PROTSYN_Eco | P
MG418 |  |  | Y | PROTSYN_Hin, PROTSYN_Eco | P
MG419 |  | N
MG421
MG422
MG423 |  |  | Y | PFLi | removed
MG424 |  |  |  |  | P
MG425 |  | N
MG426 |  |  |  |  | P
[NAME]
MG428 | G
MG429 |  |  | Y | GAMpts, ACGApts, SUCpts, MANpts, SALCpts, TREpts, MNLpts, GLCpts, MALTpts, CELBpts, ARBTpts, FRUpts | Y
MG430 |  |  | Y | PGM | Y
MG431 |  |  | Y | TPI | Y
MG432 |  |  | Y | 5AOPt2, GABAt2 | removed
MG433 |  |  | Y | PROTSYN_Eco | P
[NAME] |  |  | Y | URIDK1, URIDK2 | Y
MG435 |  |  | Y | PROTSYN_Hin | P
MG437 | G
[NAME] | G
[NAME] |  |  | Y | PGDH | removed
[NAME]
MG441
MG442
MG443
MG444 |  |  | Y | PROTSYN_Hin, PROTSYN_Eco | P
[NAME]
MG446 |  |  |  |  | P
MG447
MG448 |  |  | Y | METSR-R1, METSR-R2 | Y
MG449 | G
MG450
MG451 |  |  | Y | PROTSYN_Eco | P
MG452 | G
[NAME] |  |  |  |  | Y
MG454 | G
MG455 |  |  | Y | TYRTRS | Y
[NAME] | G
MG457
MG458 |  |  | Y | HXPRTr, GUAPRTr | Y
MG459
MG460 | G |  | Y | LDH2, LDH_L | Y
MG461
MG462 |  |  | Y | GLUTRS | Y
MG463 | G |  | Y | OHPHM6n | Y
MG464 |  | N
MG465 |  | N
[NAME] |  |  |  |  | P
MG467
[NAME]
MG526
MG469 |  | N
MG470
 | Experimental data from [NAME] et al 2006. |  |  |  | P = added as part of protein machinery
 | G = Growth
 | Empty = No growth