Spreadsheet: 000388b5-bff7-49ed-9922-8b90681a327c
Sheet: Sheet1

Table S10 –  Association of the orphan genes in fimbrial module to biofilm gene expression studies. | Unnamed: 1 | Unnamed: 2 | Unnamed: 3 | Unnamed: 4
The data shown in this table were taken from two gene expression studies (Domka et al., 2007; Domka et al., 2006)
Orphans | Fold change | Hybridization condition | Reference | Notes
ybgO | 4.15 | Gene expression ratio for the ΔyliH biofilm relative to the wild-type biofilm in LB glucose | Domka,2006 | ΔyliH ([NAME]) involved in biofilm regulated ybgO
[NAME] | 4.345 | Gene expression ratio for the ΔyliH biofilm relative to the wild-type biofilm in LB glucose | Domka,2006 | ΔyliH ([NAME]) involved in biofilm regulated ybgP
 | 3.07 | Gene expression ratio for the ΔyceP biofilm relative to the wild-type biofilm in LB glucose | Domka,2006 | Δycep (BssS) involved in biofilm regulated ybgP
yfcS | 2.38 | Gene expression ratio for the ΔyliH biofilm relative to the wild-type biofilm in LB glucose | Domka,2006 | ΔyliH ([NAME]) involved in biofilm regulated yfcS
yfcV | 3.975 | Gene expression ratio for the ΔyceP biofilm relative to the wild-type biofilm in LB glucose | Domka,2006 | Δycep (BssS) involved in biofilm regulated yfcV
 | 5.395 | Gene expression ratio for the ΔyliH biofilm relative to the wild-type biofilm in LB glucose | Domka,2006 | ΔyliH ([NAME]) involved in biofilm regulated yfcV
yfcP | 6.745 | Gene expression ratio for the ΔyliH biofilm relative to the wild-type biofilm in LB glucose | Domka,2006 | ΔyliH ([NAME]) involved in biofilm regulated yfcP
[NAME] | 3.605 | Gene expression ratio for the ΔyliH biofilm relative to the wild-type biofilm in LB glucose | Domka,2006 | ΔyliH ([NAME]) involved in biofilm regulated [NAME]
yfcQ | 2.93 | Gene expression ratio for the ΔyliH biofilm relative to the wild-type biofilm in LB glucose | Domka,2006 | ΔyliH ([NAME]) involved in biofilm regulated yfcQ
ybgQ | 2 | 15 h biofilm vs 7 h biofilim | Domka,2007 | Gene expression on biofilm cells are compared between time points (4, 7, 15 and 24 h)
 | 9.2 | 24 h biofilm vs 4 h biofilim | Domka,2007 | Gene expression on biofilm cells are compared between time points (4, 7, 15 and 24 h)
 | 2.8 | 24 h biofilm vs 7 h biofilim | Domka,2007 | Gene expression on biofilm cells are compared between time points (4, 7, 15 and 24 h)
ybgD | 6.5 | 24 h biofilm vs 4 h biofilim | Domka,2007 | Gene expression on biofilm cells are compared between time points (4, 7, 15 and 24 h)
 | 5.3 | 24 h biofilm vs 7 h biofilim | Domka,2007 | Gene expression on biofilm cells are compared between time points (4, 7, 15 and 24 h)
 | 2.8 | 24 h biofilm vs 15 h biofilim | Domka,2007 | Gene expression on biofilm cells are compared between time points (4, 7, 15 and 24 h)
 | 2.695 | Gene expression ratio for the ΔyceP biofilm relative to the wild-type biofilm in LB glucose | Domka,2006 | Δycep (BssS) involved in biofilm regulated ybgD
 | 5.115 | Gene expression ratio for the ΔyliH biofilm relative to the wild-type biofilm in LB glucose | Domka,2006 | ΔyliH ([NAME]) involved in biofilm regulated ybgD
ygiL | 2.6 | 4 h biofilm vs 7 h biofilim | Domka,2007 | Gene expression on biofilm cells are compared between time points (4, 7, 15 and 24 h)
 | 2.5 | 15 h biofilm vs 4 h biofilim | Domka,2007 | Gene expression on biofilm cells are compared between time points (4, 7, 15 and 24 h)
 | 7 | 24 h biofilm vs 4 h biofilim | Domka,2007 | Gene expression on biofilm cells are compared between time points (4, 7, 15 and 24 h)
 | 2.3 | 24 h biofilm vs 7 h biofilim | Domka,2007 | Gene expression on biofilm cells are compared between time points (4, 7, 15 and 24 h)
 | 2.83 | Gene expression ratio for the ΔyceP biofilm relative to the wild-type biofilm in LB glucose | Domka,2006 | Δycep (BssS) involved in biofilm regulated ybgD
 | 3.48 | Gene expression ratio for the ΔyliH biofilm relative to the wild-type biofilm in LB glucose | Domka,2006 | ΔyliH ([NAME]) involved in biofilm regulated ybgD