Spreadsheet: 5ca1ca04-7c0c-46f6-9be1-7fbe7929a424
Sheet: Sheet1

Supplemetal Table S3: Significant transcript and gene changes in brain tissues from HAND patients on ART | Unnamed: 1 | Unnamed: 2 | Unnamed: 3 | Unnamed: 4 | Unnamed: 5 | Unnamed: 6 | Unnamed: 7 | Unnamed: 8 | Unnamed: 9 | Unnamed: 10 | Unnamed: 11 | Unnamed: 12 | Unnamed: 13 | Unnamed: 14 | Unnamed: 15 | Unnamed: 16
All ART patients (ART, n=7) |  |  |  |  |  |  |  |  |  | ARTa, excluding low adherence (n=5)
Up-regulated: 156 transcripts; 129 genes |  |  |  |  | ART |  |  |  |  | Up-regulated: 36 transcripts; 31 genes |  |  |  |  | ART
Probe Set ID | [NAME] | [NAME] | [NAME] |  | FC | pv |  |  |  | Probe Set ID | [NAME] | [NAME] | [NAME] |  | FC | pv
209771_x_at | Hs.644105 | CD24 molecule | CD24 |  | 3.946504787 | 0.019686553 |  |  |  | 232618_at | Hs.522863 | chromosome Y open reading frame 15A | CYorf15A |  | 2.692715062 | 0.029326925
266_s_at | Hs.644105 | CD24 molecule | CD24 |  | 3.917522751 | 0.022715788 |  |  |  | 203153_at | Hs.20315 | interferon-induced protein with tetratricopeptide repeats 1 | IFIT1 |  | 2.598386951 | 0.015913893
216379_x_at | Hs.644105 | CD24 molecule | CD24 |  | 3.916901026 | 0.018113008 |  |  |  | 1560263_at | Hs.238432 | GC-rich promoter binding protein 1-like 1 | GPBP1L1 |  | 2.499977859 | 0.006587506
208651_x_at | Hs.644105 | CD24 molecule | CD24 |  | 3.505939594 | 0.017701841 |  |  |  | 204439_at | Hs.389724 | interferon-induced protein 44-like | IFI44L |  | 2.367079485 | 0.038025688
224795_x_at |  | immunoglobulin kappa constant | IGKC |  | 2.914274069 | 0.045631146 |  |  |  | 226702_at | Hs.7155 | hypothetical protein [NAME] | [NAME] |  | 2.33443236 | 0.008118774
226702_at | Hs.7155 | hypothetical protein [NAME] | [NAME] |  | 2.881898662 | 0.001843713 |  |  |  | 202086_at | Hs.517307 | myxovirus (influenza virus) resistance 1, interferon-inducible protein p78 (mouse) | MX1 |  | 2.062960992 | 0.001318743
204439_at | Hs.389724 | interferon-induced protein 44-like | IFI44L |  | 2.809514242 | 0.007809247 |  |  |  | 209433_s_at |  | phosphoribosyl pyrophosphate amidotransferase | PPAT |  | 1.925548609 | 0.025856118
203153_at | Hs.20315 | interferon-induced protein with tetratricopeptide repeats 1 | IFIT1 |  | 2.80474172 | 0.004309766 |  |  |  | 203476_at | Hs.82128 | trophoblast glycoprotein | TPBG |  | 1.889914387 | 0.041825197
229450_at | Hs.714337 | interferon-induced protein with tetratricopeptide repeats 3 | IFIT3 |  | 2.520782 | 0.013822623 |  |  |  | 218986_s_at | Hs.591710 | hypothetical protein FLJ20035 | FLJ20035 |  | 1.870276324 | 0.018050383
218986_s_at | Hs.591710 | hypothetical protein FLJ20035 | FLJ20035 |  | 2.474503868 | 0.007183854 |  |  |  | 213831_at | Hs.387679 | major histocompatibility complex, class II, DQ alpha 1 | HLA-DQA1 |  | 1.820351659 | 0.007327288
1553635_s_at | Hs.479226 | Tctex1 domain containing 1 | TCTEX1D1 |  | 2.35960351 | 0.014158852 |  |  |  | 231213_at | Hs.191046 | phosphodiesterase 1A, calmodulin-dependent | PDE1A |  | 1.779519591 | 0.046060787
201289_at | Hs.8867 | cysteine-rich, angiogenic inducer, 61 | CYR61 |  | 2.328850662 | 0.031010151 |  |  |  | 242625_at | Hs.17518 | radical S-adenosyl methionine domain containing 2 | RSAD2 |  | 1.776193054 | 0.012537208
223220_s_at | Hs.518200 | poly (ADP-ribose) polymerase family, member 9 | PARP9 |  | 2.279872311 | 0.024469081 |  |  |  | 1553635_s_at | Hs.479226 | Tctex1 domain containing 1 | TCTEX1D1 |  | 1.721399411 | 0.04506133
214453_s_at | Hs.82316 | interferon-induced protein 44 | IFI44 |  | 2.27018355 | 0.04013947 |  |  |  | 229543_at | Hs.425125 | Ribosomal protein L29 | RPL29 |  | 1.717214496 | 0.004870747
220407_s_at | Hs.133379 | transforming growth factor, beta 2 | TGFB2 |  | 2.269652189 | 0.024001162 |  |  |  | 230968_at | Hs.444785 | Full-length cDNA clone CS0DF032YA11 of Fetal brain of Homo sapiens (human) |  |  | 1.707813004 | 0.015057205
216231_s_at | Hs.534255 | beta-2-microglobulin | B2M |  | 2.269220047 | 0.046063372 |  |  |  | 228617_at | Hs.441975 | XIAP associated factor-1 | BIRC4BP |  | 1.666541162 | 0.002705136
202086_at | Hs.517307 | myxovirus resistance 1, interferon-inducible protein p78 | MX1 |  | 2.254476832 | 0.000175883 |  |  |  | 204470_at | Hs.789 | chemokine (C-X-C motif) ligand 1 (melanoma growth stimulating activity, alpha) | CXCL1 |  | 1.662899401 | 0.018859799
202430_s_at | Hs.130759 | phospholipid scramblase 1 | PLSCR1 |  | 2.25347877 | 0.029895469 |  |  |  | 238212_at |  |  |  |  | 1.638476155 | 0.036617611
203882_at | [NAME] | interferon-stimulated transcription factor 3, gamma 48kDa | ISGF3G |  | 2.193431832 | 0.020727843 |  |  |  | 244313_at | Hs.334019 | complement component (3b/4b) receptor 1 (Knops blood group) | CR1 |  | 1.627851234 | 0.00654698
212110_at | Hs.491232 | solute carrier family 39 (zinc transporter), member 14 | SLC39A14 |  | 2.182397845 | 0.043999388 |  |  |  | 209457_at | Hs.2128 | dual specificity phosphatase 5 | DUSP5 |  | 1.618942977 | 0.029365043
201170_s_at | Hs.171825 | basic helix-loop-helix domain containing, class B, 2 | BHLHB2 |  | 2.168201877 | 0.013228874 |  |  |  | 39248_at | Hs.234642 | aquaporin 3 ([NAME] blood group) | AQP3 |  | 1.618053612 | 0.004794556
202446_s_at | Hs.130759 | phospholipid scramblase 1 | PLSCR1 |  | 2.157039453 | 0.017143747 |  |  |  | 202863_at | Hs.369056 | SP100 nuclear antigen | SP100 |  | 1.601056761 | 0.049019213
218507_at | Hs.645397 | hypoxia-inducible protein 2 | HIG2 |  | 2.151175601 | 0.044242446 |  |  |  | 226995_at | Hs.11637 | Chromosome 21 open reading frame 86 | C21orf86 |  | 1.599048559 | 0.015473084
209183_s_at | Hs.93675 | chromosome 10 open reading frame 10 | C10orf10 |  | 2.100223593 | 0.037475732 |  |  |  | 32836_at | Hs.409230 | 1-acylglycerol-3-phosphate O-acyltransferase 1 | AGPAT1 |  | 1.578343197 | 0.029058189
AFFX-HUMISGF3A/M97935_3_at | Hs.651258 | signal transducer and activator of transcription 1, 91kDa | STAT1 |  | 2.060900634 | 0.020155993 |  |  |  | 1554308_s_at | Hs.116250 | gamma-aminobutyric acid (GABA) A receptor, alpha 2 | GABRA2 |  | 1.569460213 | 0.002106489
232887_at | Hs.553909 | Hypothetical LOC644139 | LOC644139 |  | 2.049672703 | 0.039282294 |  |  |  | 226614_s_at | Hs.124299 | chromosome 8 open reading frame 13 | C8orf13 |  | 1.562006205 | 0.031136108
205206_at | [NAME] | [NAME] syndrome 1 sequence | KAL1 |  | 2.046758571 | 0.018273542 |  |  |  | 224795_x_at |  | immunoglobulin kappa constant | IGKC |  | 1.559569485 | 0.0462216
221765_at | Hs.304249 | UDP-glucose ceramide glucosyltransferase | UGCG |  | 2.042770353 | 0.030774245 |  |  |  | 223764_x_at | Hs.567532 | nipsnap homolog 3B (C. elegans) | NIPSNAP3B |  | 1.552524144 | 0.041971425
1569110_x_at |  | programmed cell death protein 6-like | LOC728613 |  | 2.025489497 | 0.049603229 |  |  |  | 220407_s_at | Hs.133379 | transforming growth factor, beta 2 | TGFB2 |  | 1.545398002 | 0.012764125
214677_x_at | Hs.449585 | immunoglobulin lambda locus | IGL@ |  | 2.00749328 | 0.044811366 |  |  |  | 1554057_at | Hs.568693 | hypothetical LOC645676 | LOC645676 |  | 1.539218558 | 0.036459803
225415_at | Hs.518201 | deltex 3-like (Drosophila) | DTX3L |  | 1.997779149 | 0.019081135 |  |  |  | 223646_s_at | Hs.592254 | chromosome Y open reading frame 15B | CYorf15B |  | 1.530608818 | 0.021050732
201141_at | Hs.190495 | glycoprotein (transmembrane) nmb | GPNMB |  | 1.9977443 | 0.045851308 |  |  |  | 243686_at | Hs.444665 | MRNA; cDNA DKFZp686E1944 (from clone DKFZp686E1944) |  |  | 1.520064748 | 0.046286932
229331_at | Hs.527090 | spermatogenesis associated 18 homolog (rat) | [NAME] |  | 1.995081446 | 0.015394263 |  |  |  | 225263_at | Hs.647625 | similar to Heparan-sulfate 6-O-sulfotransferase 1 (HS6ST-1) | LOC728969 |  | 1.517665783 | 0.019959174
201531_at | Hs.534052 | zinc finger protein 36, C3H type, homolog (mouse) | ZFP36 |  | 1.992759814 | 0.049566522 |  |  |  | 232449_at | Hs.647227 | beta-carotene dioxygenase 2 | BCDO2 |  | 1.515352817 | 0.004660634
242625_at | Hs.17518 | radical S-adenosyl methionine domain containing 2 | RSAD2 |  | 1.97632439 | 0.004183033 |  |  |  | 227609_at | Hs.546467 | epithelial stromal interaction 1 (breast) | EPSTI1 |  | 1.513866242 | 0.020924944
201202_at | Hs.147433 | proliferating cell nuclear antigen | PCNA |  | 1.970611911 | 0.041497316 |  |  |  | 200950_at | Hs.124126 | [NAME] related protein 2/3 complex, subunit 1A, 41kDa | ARPC1A |  | 1.513154697 | 0.034589969
214745_at | Hs.567423 | phospholipase C, eta 1 | PLCH1 |  | 1.965483799 | 0.022760488
213831_at | Hs.387679 | major histocompatibility complex, class II, DQ alpha 1 | HLA-DQA1 |  | 1.914690473 | 0.031554228
206376_at | Hs.44424 | solute carrier family 6, member 15 | SLC6A15 |  | 1.905936445 | 0.044792198
202625_at | Hs.651186 | v-yes-1 Yamaguchi sarcoma viral related oncogene homolog | LYN |  | 1.903135306 | 0.044994906
202863_at | Hs.369056 | SP100 nuclear antigen | SP100 |  | 1.897637535 | 0.012152864
229543_at | Hs.425125 | Ribosomal protein L29 | RPL29 |  | 1.893311895 | 0.001431762
235157_at | Hs.518203 | Poly (ADP-ribose) polymerase family, member 14 | PARP14 |  | 1.89129307 | 0.035568669
227609_at | Hs.546467 | epithelial stromal interaction 1 (breast) | EPSTI1 |  | 1.886722555 | 0.008643541
209140_x_at | Hs.77961 | major histocompatibility complex, class I, B | HLA-B |  | 1.886278109 | 0.031421096
203476_at | Hs.82128 | trophoblast glycoprotein | TPBG |  | 1.885499146 | 0.016023131
239477_at | Hs.120196 | EF-hand domain family, member B | EFHB |  | 1.86695468 | 0.013686651
244313_at | Hs.334019 | complement component (3b/4b) receptor 1 (Knops blood group) | CR1 |  | 1.8516926 | 0.011506947
218559_s_at | Hs.651210 | v-maf musculoaponeurotic fibrosarcoma oncogene homolog B (avian) | MAFB |  | 1.849875476 | 0.037073978
231213_at | Hs.191046 | phosphodiesterase 1A, calmodulin-dependent | PDE1A |  | 1.841016628 | 0.013794825
241470_x_at | Hs.247150 | Transcribed locus |  |  | 1.820819766 | 0.044052899
200887_s_at | Hs.651258 | signal transducer and activator of transcription 1, 91kDa | STAT1 |  | 1.813049762 | 0.036727692
1553956_at | Hs.12319 | amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 4 | ALS2CR4 |  | 1.800611448 | 0.026922958
221897_at | Hs.458412 | tripartite motif-containing 52 | TRIM52 |  | 1.794875914 | 0.032755357
232002_at | Hs.466471 | Glucose phosphate isomerase | GPI |  | 1.775311552 | 0.037620542
209433_s_at |  | phosphoribosyl pyrophosphate amidotransferase | PPAT |  | 1.772609985 | 0.021288535
218092_s_at | Hs.591619 | HIV-1 Rev binding protein | HRB |  | 1.753549444 | 0.035816614
239468_at | Hs.128193 | mohawk homeobox | MKX |  | 1.746941413 | 0.017400047
205990_s_at | Hs.643085 | wingless-type MMTV integration site family, member 5A | WNT5A |  | 1.745367823 | 0.046444713
224800_at | Hs.368359 | WD repeat and FYVE domain containing 1 | WDFY1 |  | 1.738574533 | 0.028224911
1555471_a_at | Hs.24889 | formin 2 | FMN2 |  | 1.733430134 | 0.044555648
226614_s_at | Hs.124299 | chromosome 8 open reading frame 13 | C8orf13 |  | 1.724196166 | 0.007785206
226925_at | Hs.255491 | acid phosphatase-like 2 | ACPL2 |  | 1.717836464 | 0.035346259
204430_s_at | Hs.530003 | solute carrier family 2 (facilitated glucose/fructose transporter), member 5 | SLC2A5 |  | 1.700928998 | 0.021087616
212646_at | Hs.98910 | raftlin, lipid raft linker 1 | RFTN1 |  | 1.696950766 | 0.037135318
208699_x_at | Hs.89643 | transketolase ([NAME] syndrome) | TKT |  | 1.693550959 | 0.01996217
201037_at | Hs.26010 | phosphofructokinase, platelet | PFKP |  | 1.688239148 | 0.043979637
240065_at | Hs.276287 | family with sequence similarity 81, member B | FAM81B |  | 1.682260052 | 0.026185712
203706_s_at | Hs.173859 | frizzled homolog 7 (Drosophila) | FZD7 |  | 1.677413533 | 0.046760903
235300_x_at | Hs.48297 | ring finger and CHY zinc finger domain containing 1 | RCHY1 |  | 1.676854386 | 0.025195739
225030_at | Hs.425091 | family with sequence similarity 44, member B | FAM44B |  | 1.673712808 | 0.047327619
224606_at | Hs.4055 | Kruppel-like factor 6 | [NAME] |  | 1.667769017 | 0.036535386
200599_s_at | Hs.192374 | heat shock protein 90kDa beta (Grp94), member 1 | HSP90B1 |  | 1.666679911 | 0.04038388
202957_at | Hs.14601 | hematopoietic cell-specific [NAME] substrate 1 | HCLS1 |  | 1.65993279 | 0.026276795
219863_at | Hs.26663 | hect domain and RLD 5 | HERC5 |  | 1.657597783 | 0.045867455
218049_s_at | Hs.333823 | mitochondrial ribosomal protein [NAME] | MRPL13 |  | 1.652417492 | 0.023419103
209774_x_at | Hs.590921 | chemokine (C-X-C motif) ligand 2 | CXCL2 |  | 1.649550704 | 0.018672946
219352_at | Hs.529317 | hect domain and RLD 6 | HERC6 |  | 1.647705798 | 0.035757645
219553_at | Hs.651246 | non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase) | NME7 |  | 1.647455324 | 0.033555793
220980_s_at | Hs.513013 | ADP-dependent glucokinase | ADPGK |  | 1.645628661 | 0.047902282
214751_at | Hs.467223 | zinc finger protein 468 | ZNF468 |  | 1.641692187 | 0.028118387
217014_s_at | Hs.546239 | alpha-2-glycoprotein 1, zinc-binding | AZGP1 |  | 1.637073455 | 0.045843112
226323_at | Hs.413678 | coiled-coil domain containing 16 | CCDC16 |  | 1.635718224 | 0.009135791
240418_at | Hs.649676 | Transcribed locus |  |  | 1.631643152 | 0.042055148
223618_at | Hs.24889 | formin 2 | FMN2 |  | 1.628012858 | 0.036323419
226117_at | Hs.310640 | TRAF-interacting protein with a forkhead-associated domain | TIFA |  | 1.627847156 | 0.003713909
209092_s_at | Hs.279061 | chromosome 17 open reading frame 25 | C17orf25 |  | 1.62081888 | 0.033264695
221561_at | Hs.496383 | sterol O-acyltransferase (acyl-Coenzyme A: cholesterol acyltransferase) 1 | SOAT1 |  | 1.620315127 | 0.042711162
230968_at | Hs.444785 | Full-length cDNA clone CS0DF032YA11 of Fetal brain of Homo sapiens (human) |  |  | 1.614124589 | 0.010942868
213797_at | Hs.17518 | radical S-adenosyl methionine domain containing 2 | RSAD2 |  | 1.612925473 | 0.026437557
202203_s_at | Hs.295137 | autocrine motility factor receptor | AMFR |  | 1.612584996 | 0.029275587
201400_at | Hs.82793 | proteasome (prosome, macropain) subunit, beta type, 3 | PSMB3 |  | 1.612008508 | 0.038112835
208910_s_at | Hs.555866 | complement component 1, q subcomponent binding protein | C1QBP |  | 1.610998263 | 0.017986666
224701_at | Hs.518203 | poly (ADP-ribose) polymerase family, member 14 | PARP14 |  | 1.610706019 | 0.020870316
221535_at | Hs.518505 | large subunit GTPase 1 homolog (S. cerevisiae) | [NAME] |  | 1.610180564 | 0.007028782
217916_s_at | Hs.126941 | family with sequence similarity 49, member B | FAM49B |  | 1.605071281 | 0.041681743
227440_at | Hs.506458 | ankyrin repeat and sterile alpha motif domain containing 1B | ANKS1B |  | 1.59622929 | 0.038179473
236918_s_at | Hs.591289 | leucine rich repeat containing 34 | LRRC34 |  | 1.58930171 | 0.010245788
227081_at | Hs.406050 | [NAME], axonemal, light intermediate chain 1 | DNALI1 |  | 1.589028821 | 0.044813494
200950_at | Hs.124126 | [NAME] related protein 2/3 complex, subunit 1A, 41kDa | ARPC1A |  | 1.588869954 | 0.007781095
232197_x_at | Hs.149103 | arylsulfatase B | ARSB |  | 1.586321395 | 0.040854603
212998_x_at | Hs.409934 | major histocompatibility complex, class II, DQ beta 1 | HLA-DQB1 |  | 1.584922769 | 0.042033134
218307_at | Hs.8033 | radical S-adenosyl methionine domain containing 1 | RSAD1 |  | 1.577104279 | 0.033830059
233547_x_at | Hs.191046 | phosphodiesterase 1A, calmodulin-dependent | PDE1A |  | 1.575229155 | 0.049894516
203646_at | Hs.744 | ferredoxin 1 | FDX1 |  | 1.571587069 | 0.011735176
209184_s_at | Hs.442344 | insulin receptor substrate 2 | IRS2 |  | 1.571005223 | 0.019058883
202869_at | Hs.524760 | 2',5'-oligoadenylate synthetase 1, 40/46kDa | OAS1 |  | 1.566503064 | 0.038728383
AFFX-HUMISGF3A/M97935_5_at | Hs.651258 | signal transducer and activator of transcription 1, 91kDa | STAT1 |  | 1.561257659 | 0.019823137
229051_at |  |  |  |  | 1.558913946 | 0.016186672
225263_at | Hs.647625 | similar to Heparan-sulfate 6-O-sulfotransferase 1 (HS6ST-1) | LOC728969 |  | 1.557593329 | 0.004429805
204140_at | Hs.421194 | [NAME] sulfotransferase 1 | TPST1 |  | 1.556747726 | 0.023876495
212138_at | Hs.331431 | SCC-112 protein | SCC-112 |  | 1.555997682 | 0.045734601
202950_at | Hs.83114 | crystallin, zeta (quinone reductase) | CRYZ |  | 1.553633826 | 0.022873405
204552_at | Hs.469386 | CDNA FLJ34214 fis, clone FCBBF3021807 |  |  | 1.552541356 | 0.048914925
222978_at | Hs.512465 | surfeit 4 | SURF4 |  | 1.54746926 | 0.025927561
224640_at | Hs.507087 | signal peptide peptidase 3 | UNQ1887 |  | 1.545069602 | 0.00642709
236068_s_at | Hs.594911 | Transcribed locus |  |  | 1.544310678 | 0.02439956
226347_at |  |  |  |  | 1.54220378 | 0.043949182
208700_s_at | Hs.89643 | transketolase ([NAME] syndrome) | TKT |  | 1.541474957 | 0.038034741
222309_at | Hs.519930 | Chromosome 6 open reading frame 62 | C6orf62 |  | 1.540908384 | 0.033595847
223764_x_at | Hs.567532 | nipsnap homolog 3B (C. elegans) | NIPSNAP3B |  | 1.540868169 | 0.025792926
235579_at | Hs.210367 | Splicing factor, arginine/serine-rich 2, interacting protein | SFRS2IP |  | 1.539370593 | 0.037766499
230652_at | Hs.446641 | v-raf murine sarcoma 3611 viral oncogene homolog | ARAF |  | 1.539184117 | 0.026029058
1557820_at | Hs.528996 | AFG3 ATPase family gene 3-like 2 (yeast) | AFG3L2 |  | 1.537247701 | 0.037230204
213093_at | Hs.531704 | protein kinase C, alpha | PRKCA |  | 1.536887428 | 0.047646936
225516_at | [NAME] | solute carrier family 7 (cationic amino acid transporter, y+ system), member 2 | SLC7A2 |  | 1.535700959 | 0.047804323
216467_s_at | Hs.124537 | SNF2 histone linker PHD RING helicase | SHPRH |  | 1.535631822 | 0.04461319
210092_at | Hs.421576 | mago-nashi homolog, proliferation-associated (Drosophila) | MAGOH |  | 1.535103584 | 0.024287835
229085_at | Hs.517868 | leucine rich repeat containing 3B | [NAME] |  | 1.535055888 | 0.043639174
209457_at | Hs.2128 | dual specificity phosphatase 5 | DUSP5 |  | 1.534310742 | 0.023834492
235463_s_at | Hs.506829 | LAG1 homolog, ceramide synthase 6 (S. cerevisiae) | [NAME] |  | 1.534269696 | 0.021314898
203830_at | Hs.462754 | chromosome 17 open reading frame 75 | C17orf75 |  | 1.530773122 | 0.031917711
1555843_at | Hs.465808 | Heterogeneous nuclear ribonucleoprotein M | HNRPM |  | 1.530295585 | 0.003954102
204881_s_at | Hs.304249 | UDP-glucose ceramide glucosyltransferase | UGCG |  | 1.530200765 | 0.045729356
223053_x_at | Hs.30026 | SSU72 [NAME] polymerase II CTD phosphatase homolog (S. cerevisiae) | SSU72 |  | 1.528040624 | 0.030173937
39248_at | Hs.234642 | aquaporin 3 ([NAME] blood group) | AQP3 |  | 1.526845352 | 0.003636304
204470_at | Hs.789 | chemokine (C-X-C motif) ligand 1 (melanoma growth stimulating activity, alpha) | CXCL1 |  | 1.526435601 | 0.041086488
228617_at | Hs.441975 | XIAP associated factor-1 | BIRC4BP |  | 1.526180642 | 0.008715893
222108_at | Hs.121520 | adhesion molecule with Ig-like domain 2 | AMIGO2 |  | 1.525802401 | 0.021285279
211368_s_at | Hs.2490 | caspase 1, apoptosis-related cysteine peptidase (interleukin 1, beta, convertase) | [NAME] |  | 1.52522474 | 0.03045266
1559263_s_at |  | zinc finger CCCH-type containing 12D | ZC3H12D |  | 1.521678834 | 0.040808245
228523_at | Hs.591918 | nanos homolog 1 (Drosophila) | NANOS1 |  | 1.521175447 | 0.027538058
235566_at | Hs.267632 | TATA element modulatory factor 1 | TMF1 |  | 1.521103169 | 0.03494191
225200_at | Hs.388087 | DPH3, [NAME] homolog (S. cerevisiae) | DPH3 |  | 1.518909428 | 0.036393814
222642_s_at | Hs.31082 | [NAME] 33 | TMEM33 |  | 1.518451837 | 0.00743415
213321_at | Hs.436387 | branched chain keto acid dehydrogenase E1, beta polypeptide | BCKDHB |  | 1.518428562 | 0.044375089
217552_x_at | Hs.334019 | complement component (3b/4b) receptor 1 (Knops blood group) | CR1 |  | 1.517875444 | 0.015244532
204905_s_at | [NAME] | eukaryotic translation elongation factor 1 epsilon 1 | EEF1E1 |  | 1.516058103 | 0.029994248
235276_at | Hs.546467 | Epithelial stromal interaction 1 (breast) | EPSTI1 |  | 1.515422789 | 0.023189984
1552519_at | Hs.352338 | activin A receptor, type IC | ACVR1C |  | 1.51248531 | 0.031198253
32836_at | Hs.409230 | 1-acylglycerol-3-phosphate O-acyltransferase 1 | AGPAT1 |  | 1.509764825 | 0.018780245
63009_at | Hs.606584 | SHQ1 homolog (S. cerevisiae) | SHQ1 |  | 1.507643531 | 0.042314161
203078_at | Hs.82919 | cullin 2 | CUL2 |  | 1.505384399 | 0.007834739
231820_x_at | Hs.288995 | zinc finger protein 587 | ZNF587 |  | 1.501895694 | 0.021124966
202510_s_at | Hs.525607 | tumor necrosis factor, alpha-induced protein 2 | TNFAIP2 |  | 1.50173006 | 0.009638131
205269_at | Hs.304475 | [NAME] 2 (SH2 domain containing leukocyte protein of 76kDa) | LCP2 |  | 1.500307706 | 0.012281789
Down-regulated: 177 transcripts, 131 genes |  |  |  |  | ART |  |  |  |  | Down-regulated: 109 transcripts, 76 genes |  |  |  |  | ART
Probe Set ID | [NAME] | [NAME] | [NAME] |  | FC | pv |  |  |  | Probe Set ID | [NAME] | [NAME] | [NAME] |  | FC | pv
212451_at | Hs.9997 | KIAA0256 gene product | KIAA0256 |  | -2.865378613 | 0.007822633 |  |  |  | 222024_s_at | Hs.459211 | A kinase (PRKA) anchor protein 13 | AKAP13 |  | -1.649800456 | 0.012458305
208995_s_at | Hs.470544 | peptidylprolyl isomerase G (cyclophilin G) | PPIG |  | -2.551063566 | 0.031805796 |  |  |  | 201051_at | Hs.458747 | [NAME] (leucine-rich) nuclear phosphoprotein 32 family, member A | ANP32A |  | -1.575430613 | 0.049428978
210193_at | Hs.121333 | myelin-associated oligodendrocyte basic protein | MOBP |  | -2.503002824 | 0.005249277 |  |  |  | 201305_x_at | Hs.494604 | [NAME] (leucine-rich) nuclear phosphoprotein 32 family, member B | ANP32B |  | -1.648954223 | 0.031074023
214314_s_at | Hs.158688 | eukaryotic translation initiation factor 5B | EIF5B |  | -2.482597245 | 0.01170707 |  |  |  | 201306_s_at | Hs.494604 | [NAME] (leucine-rich) nuclear phosphoprotein 32 family, member B | ANP32B |  | -1.613231676 | 0.027520638
209747_at | Hs.592317 | transforming growth factor, beta 3 | TGFB3 |  | -2.459747838 | 0.002908588 |  |  |  | 216933_x_at | Hs.158932 | adenomatosis polyposis coli | APC |  | -1.508992185 | 0.01323302
213763_at | Hs.397465 | Homeodomain interacting protein kinase 2 | HIPK2 |  | -2.419224152 | 0.009374281 |  |  |  | 204378_at | Hs.400556 | breast carcinoma amplified sequence 1 | BCAS1 |  | -1.794982087 | 0.032001133
208859_s_at | Hs.645562 | alpha thalassemia/mental retardation syndrome X-linked | ATRX |  | -2.403592841 | 0.019953166 |  |  |  | 207186_s_at | Hs.444200 | bromodomain PHD finger transcription factor | BPTF |  | -1.594211367 | 0.02750483
214723_x_at | Hs.532921 | KIAA1641 | KIAA1641 |  | -2.391512511 | 0.033356322 |  |  |  | 1556392_a_at | Hs.145517 | CDNA clone IMAGE:5285271 |  |  | -1.656551575 | 0.000890466
233204_at |  | similar to hypothetical protein MGC40405 | FLJ11903 |  | -2.236780026 | 0.017916615 |  |  |  | 238718_at | Hs.417630 | CDNA FLJ37816 fis, clone BRSSN2003093 |  |  | -2.198087098 | 0.02102238
201635_s_at | Hs.478407 | fragile X mental retardation, autosomal homolog 1 | FXR1 |  | -2.216333295 | 0.026766231 |  |  |  | 235293_at | Hs.417630 | CDNA FLJ37816 fis, clone BRSSN2003093 |  |  | -1.572471591 | 0.038021937
235645_at | Hs.464733 | establishment of cohesion 1 homolog 1 (S. cerevisiae) | ESCO1 |  | -2.196953542 | 0.01126041 |  |  |  | 225923_at | Hs.595403 | CDNA FLJ41394 fis, clone BRCAN2026197 |  |  | -1.517880413 | 0.046953034
217597_x_at | Hs.484068 | RAB40B, member RAS oncogene family | RAB40B |  | -2.170468454 | 0.012079238 |  |  |  | 1568934_at | Hs.78913 | chemokine (C-X3-C motif) receptor 1 | CX3CR1 |  | -2.172228034 | 0.018635015
238718_at | Hs.417630 | CDNA FLJ37816 fis, clone BRSSN2003093 |  |  | -2.167141776 | 0.008537594 |  |  |  | 229586_at | Hs.59159 | chromodomain helicase DNA binding protein 9 | CHD9 |  | -1.603553921 | 0.01434935
233869_x_at | Hs.292549 | Discs, large homolog 1 (Drosophila) | DLG1 |  | -2.143316507 | 0.048031754 |  |  |  | 206500_s_at | Hs.437941 | chromosome 14 open reading frame 106 | C14orf106 |  | -1.626612631 | 0.00017059
1553142_at | Hs.210586 | chromosome 13 open reading frame 31 | C13orf31 |  | -2.138998 | 0.041690185 |  |  |  | 228791_at | Hs.6734 | Chromosome 15 open reading frame 38 | C15orf38 |  | -1.709875708 | 0.048103976
1568934_at | Hs.78913 | chemokine (C-X3-C motif) receptor 1 | CX3CR1 |  | -2.135919874 | 0.006308203 |  |  |  | 236847_at | Hs.134209 | chromosome 19 open reading frame 18 | C19orf18 |  | -1.522969104 | 0.017495292
1558474_at | Hs.633366 | CDNA FLJ38034 fis, clone CTONG2013393 |  |  | -2.099030195 | 0.036204399 |  |  |  | 220755_s_at | Hs.640836 | chromosome 6 open reading frame 48 | C6orf48 |  | -1.72315208 | 0.012173567
239744_at | Hs.494875 | Regulator of G-protein signalling 3 | RGS3 |  | -2.090596481 | 0.000720342 |  |  |  | 223075_s_at | Hs.4944 | chromosome 9 open reading frame 58 | C9orf58 |  | -1.75369437 | 0.01890269
207276_at | Hs.571748 | cerebellar degeneration-related protein 1, 34kDa | CDR1 |  | -2.090434243 | 0.016750441 |  |  |  | 1553214_a_at | Hs.585464 | coiled-coil domain containing 7 | CCDC7 |  | -1.88698599 | 0.031074675
204378_at | Hs.400556 | breast carcinoma amplified sequence 1 | BCAS1 |  | -2.090367399 | 0.006824091 |  |  |  | 232733_s_at | Hs.271285 | collagen, type XX, alpha 1 | [NAME] |  | -1.56871626 | 0.030537746
235110_at | Hs.502775 | HRAS-like suppressor 3 | HRASLS3 |  | -2.009294518 | 0.005339623 |  |  |  | 211813_x_at | Hs.156316 | decorin | DCN |  | -1.667936911 | 0.030132211
224605_at | Hs.173705 | HCV F-transactivated protein 1 | LOC401152 |  | -2.009287827 | 0.000315379 |  |  |  | 202532_s_at | Hs.83765 | dihydrofolate reductase | DHFR |  | -1.509798959 | 0.047995861
219387_at | Hs.292925 | KIAA1212 | KIAA1212 |  | -2.004558855 | 0.010150991 |  |  |  | 240305_at | Hs.432397 | DIP2 disco-interacting protein 2 homolog C (Drosophila) | DIP2C |  | -1.604362984 | 0.023739426
200836_s_at | Hs.517949 | microtubule-associated protein 4 | MAP4 |  | -2.001206325 | 0.005676466 |  |  |  | 204840_s_at | Hs.567367 | early endosome antigen 1, 162kD | [NAME] |  | -1.784604915 | 0.002432883
227708_at | Hs.586423 | eukaryotic translation elongation factor 1 alpha 1 | EEF1A1 |  | -1.981761982 | 0.005822967 |  |  |  | 204037_at | Hs.126667 | endothelial differentiation, lysophosphatidic acid G-protein-coupled receptor, 2 | EDG2 |  | -1.645856411 | 0.034082812
243462_s_at | Hs.244590 | BTB (POZ) domain containing 3 | BTBD3 |  | -1.98158587 | 0.035491558 |  |  |  | 218859_s_at | Hs.369284 | ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae) | ESF1 |  | -1.555390897 | 0.016060841
209258_s_at | Hs.24485 | structural maintenance of chromosomes 3 | [NAME] |  | -1.963055559 | 0.015764233 |  |  |  | 235645_at | Hs.464733 | establishment of cohesion 1 homolog 1 (S. cerevisiae) | ESCO1 |  | -1.955726079 | 0.049395864
201024_x_at | Hs.158688 | eukaryotic translation initiation factor 5B | EIF5B |  | -1.962106556 | 0.010008705 |  |  |  | 227708_at | Hs.586423 | eukaryotic translation elongation factor 1 alpha 1 | EEF1A1 |  | -2.094046082 | 0.011594273
225097_at | Hs.397465 | Homeodomain interacting protein kinase 2 | HIPK2 |  | -1.960963326 | 0.015195076 |  |  |  | 214395_x_at | Hs.333388 | Eukaryotic translation elongation factor 1 delta | EEF1D |  | -1.701078521 | 0.034778551
243_g_at | Hs.517949 | microtubule-associated protein 4 | MAP4 |  | -1.945575486 | 0.006586287 |  |  |  | 214394_x_at | Hs.333388 | eukaryotic translation elongation factor 1 delta | EEF1D |  | -1.543648585 | 0.049046559
221868_at | Hs.416735 | KIAA1155 protein | KIAA1155 |  | -1.943580727 | 0.006156696 |  |  |  | 214314_s_at | Hs.158688 | eukaryotic translation initiation factor 5B | EIF5B |  | -2.30883408 | 0.043715008
202125_s_at | Hs.152774 | trafficking protein, [NAME] binding 2 | TRAK2 |  | -1.937885981 | 0.00217591 |  |  |  | 201024_x_at | Hs.158688 | eukaryotic translation initiation factor 5B | EIF5B |  | -1.860497963 | 0.039052784
224216_at |  |  |  |  | -1.908970408 | 0.021008903 |  |  |  | 201026_at | Hs.158688 | eukaryotic translation initiation factor 5B | EIF5B |  | -1.784043819 | 0.028492416
216563_at | Hs.464585 | Ankyrin repeat domain 12 | ANKRD12 |  | -1.906596824 | 0.046025035 |  |  |  | 225684_at | Hs.463607 | family with sequence similarity 33, member A | FAM33A |  | -1.676500998 | 0.002126822
201829_at | Hs.25155 | neuroepithelial cell transforming gene 1 | NET1 |  | -1.898694764 | 0.006734275 |  |  |  | 205117_at | Hs.483635 | fibroblast growth factor 1 (acidic) | FGF1 |  | -1.560409654 | 0.024453875
201929_s_at | Hs.407580 | plakophilin 4 | [NAME] |  | -1.891081034 | 0.03400736 |  |  |  | 224841_x_at |  | growth arrest-specific 5 | [NAME] |  | -1.511198476 | 0.045814474
201026_at | Hs.158688 | eukaryotic translation initiation factor 5B | EIF5B |  | -1.879942794 | 0.006471104 |  |  |  | 206397_x_at | Hs.412355 | growth differentiation factor 1 /// LAG1 homolog, ceramide synthase 1 | GDF1 /// LASS1 |  | -1.574847049 | 0.028128478
1553214_a_at | Hs.585464 | coiled-coil domain containing 7 | CCDC7 |  | -1.878321973 | 0.01230795 |  |  |  | 1558779_at | Hs.599225 | H2A histone family, member Y | H2AFY |  | -1.664092704 | 0.039445273
226484_at | Hs.409561 | zinc finger and BTB domain containing 47 | [NAME] |  | -1.865654305 | 0.006183024 |  |  |  | 224605_at | Hs.173705 | HCV F-transactivated protein 1 | LOC401152 |  | -1.929572305 | 0.002232881
238526_at | Hs.258209 | RAB3A interacting protein (rabin3) | [NAME] |  | -1.850739616 | 0.014719834 |  |  |  | 224604_at | Hs.173705 | HCV F-transactivated protein 1 | LOC401152 |  | -1.728557062 | 0.008204358
235794_at | Hs.121333 | myelin-associated oligodendrocyte basic protein | MOBP |  | -1.84677355 | 0.014963073 |  |  |  | 200679_x_at | Hs.434102 | high-mobility group box 1 | HMGB1 |  | -1.51107714 | 0.039552504
220609_at |  | hypothetical protein LOC202181 | LOC202181 |  | -1.846158587 | 0.045482322 |  |  |  | 214469_at | Hs.121017 | histone cluster 1, H2ae | HIST1H2AE |  | -1.792133879 | 0.038305571
238853_at | Hs.258209 | RAB3A interacting protein (rabin3) | [NAME] |  | -1.840248694 | 0.000808027 |  |  |  | 218279_s_at | Hs.530461 | histone cluster 2, H2aa3 | HIST2H2AA3 |  | -1.862687184 | 0.021392903
232733_s_at | Hs.271285 | collagen, type XX, alpha 1 | [NAME] |  | -1.836856786 | 0.0070085 |  |  |  | 214290_s_at | Hs.530461 | histone cluster 2, H2aa3 | HIST2H2AA3 |  | -1.506045616 | 0.021210631
204840_s_at | Hs.567367 | early endosome antigen 1, 162kD | [NAME] |  | -1.8310909 | 0.000682004 |  |  |  | 213763_at | Hs.397465 | Homeodomain interacting protein kinase 2 | HIPK2 |  | -2.026979695 | 0.044854239
211909_x_at | Hs.445000 | prostaglandin E receptor 3 (subtype EP3) | PTGER3 |  | -1.811273711 | 0.021692077 |  |  |  | 235110_at | Hs.502775 | HRAS-like suppressor 3 | HRASLS3 |  | -1.943115259 | 0.019121016
216929_x_at | Hs.561993 | ABO blood group | ABO |  | -1.80016967 | 0.048393859 |  |  |  | 1554447_at | [NAME] | hypothetical LOC554203 | LOC554203 |  | -1.534102181 | 0.019466758
204037_at | Hs.126667 | endothelial differentiation, lysophosphatidic acid G-protein-coupled receptor, 2 | EDG2 |  | -1.790674052 | 0.007040082 |  |  |  | 227466_at | Hs.399980 | hypothetical protein LOC285550 | LOC285550 |  | -1.603847808 | 0.039153668
220940_at | Hs.532921 | KIAA1641 | KIAA1641 |  | -1.786731246 | 0.001021616 |  |  |  | 219599_at | Hs.648394 | hypothetical protein PRO1843 | PRO1843 |  | -1.637932424 | 0.042901785
231875_at | Hs.374201 | [NAME] member 21A | KIF21A |  | -1.784560413 | 0.000995335 |  |  |  | 212451_at | Hs.9997 | KIAA0256 gene product | KIAA0256 |  | -2.397117274 | 0.038164016
238573_at | Hs.194081 | Transcribed locus |  |  | -1.777221621 | 0.013093245 |  |  |  | 221868_at | Hs.416735 | KIAA1155 protein | KIAA1155 |  | -1.723216593 | 0.030040115
211424_x_at |  | methyltransferase like 7A | METTL7A |  | -1.764152697 | 0.022166701 |  |  |  | 219387_at | Hs.292925 | KIAA1212 | KIAA1212 |  | -1.886222405 | 0.040163977
224604_at | Hs.173705 | HCV F-transactivated protein 1 | LOC401152 |  | -1.74903634 | 0.001721947 |  |  |  | 220940_at | Hs.532921 | KIAA1641 | KIAA1641 |  | -1.59157111 | 0.00409607
213079_at | Hs.522662 | TSR2, 20S rRNA accumulation, homolog (S. cerevisiae) | TSR2 |  | -1.745374831 | 0.022731263 |  |  |  | 231875_at | Hs.374201 | [NAME] member 21A | KIF21A |  | -1.651543846 | 0.006028362
33850_at | Hs.517949 | microtubule-associated protein 4 | MAP4 |  | -1.742758237 | 0.014930388 |  |  |  | 202822_at | Hs.444362 | LIM domain containing preferred translocation partner in lipoma | LPP |  | -1.644935494 | 0.02035551
200834_s_at | Hs.190968 | ribosomal protein S21 | RPS21 |  | -1.741503614 | 0.000103134 |  |  |  | 243_g_at | Hs.517949 | microtubule-associated protein 4 | MAP4 |  | -1.88626695 | 0.025914959
235132_at |  | hypothetical protein LOC254128 | LOC254128 |  | -1.738450031 | 0.025190748 |  |  |  | 200836_s_at | Hs.517949 | microtubule-associated protein 4 | MAP4 |  | -1.863950303 | 0.0270347
212044_s_at | Hs.523463 | Ribosomal protein L27a | RPL27A |  | -1.737970593 | 0.000351612 |  |  |  | 212566_at | Hs.517949 | microtubule-associated protein 4 | MAP4 |  | -1.513628477 | 0.0388662
205451_at | Hs.584654 | myeloid/lymphoid or mixed-lineage leukemia translocated to, 7 | MLLT7 |  | -1.737064568 | 0.021013227 |  |  |  | 243064_at | Hs.534582 | Mitochondrial translational initiation factor 3 | MTIF3 |  | -1.571579532 | 0.042911276
233080_s_at | Hs.591637 | PRP40 pre-mRNA processing factor 40 homolog A (yeast) | PRPF40A |  | -1.729674031 | 0.020695165 |  |  |  | 210193_at | Hs.121333 | myelin-associated oligodendrocyte basic protein | MOBP |  | -2.202244078 | 0.025740554
229586_at | Hs.59159 | chromodomain helicase DNA binding protein 9 | CHD9 |  | -1.72466131 | 0.002644482 |  |  |  | 201829_at | Hs.25155 | neuroepithelial cell transforming gene 1 | NET1 |  | -1.886369727 | 0.022568843
211992_at | Hs.356604 | WNK lysine deficient protein kinase 1 | [NAME] |  | -1.720770168 | 0.011637141 |  |  |  | 212530_at | Hs.24119 | NIMA (never in mitosis gene a)-related kinase 7 | NEK7 |  | -1.628954851 | 0.035068652
214395_x_at | Hs.333388 | Eukaryotic translation elongation factor 1 delta | EEF1D |  | -1.720249712 | 0.011325548 |  |  |  | 241633_x_at | [NAME] | Nuclear factor I/X (CCAAT-binding transcription factor) | NFIX |  | -1.622070804 | 0.046302447
239339_at | Hs.591061 | Zinc finger protein 397 | ZNF397 |  | -1.714317965 | 0.028367028 |  |  |  | 209119_x_at | Hs.651199 | nuclear receptor subfamily 2, group F, member 2 | NR2F2 |  | -1.523621239 | 0.017604841
211993_at | Hs.356604 | WNK lysine deficient protein kinase 1 | [NAME] |  | -1.71098691 | 0.035911114 |  |  |  | 208753_s_at | Hs.524599 | nucleosome assembly protein 1-like 1 | NAP1L1 |  | -1.61373867 | 0.0229902
1562979_at | Hs.621206 | CDNA clone IMAGE:4939660 |  |  | -1.703796079 | 0.023824827 |  |  |  | 201928_at | Hs.407580 | plakophilin 4 | [NAME] |  | -1.505884471 | 0.00902376
235765_at | Hs.444213 | transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila) | [NAME] |  | -1.702293229 | 0.032809879 |  |  |  | 1558654_at | Hs.435479 | Protein phosphatase 1H (PP2C domain containing) | PPM1H |  | -1.558707728 | 0.022990374
201991_s_at | Hs.591373 | [NAME] member 5B | KIF5B |  | -1.700894439 | 0.024273168 |  |  |  | 238526_at | Hs.258209 | RAB3A interacting protein (rabin3) | [NAME] |  | -1.898046316 | 0.030550025
1558779_at | Hs.599225 | H2A histone family, member Y | H2AFY |  | -1.699244525 | 0.012868434 |  |  |  | 238853_at | Hs.258209 | RAB3A interacting protein (rabin3) | [NAME] |  | -1.741886276 | 0.005418598
1553094_at | Hs.434138 | [NAME] (hemokinin) | TAC4 |  | -1.698791653 | 0.010099964 |  |  |  | 217597_x_at | Hs.484068 | RAB40B, member RAS oncogene family | RAB40B |  | -2.038790524 | 0.045058527
204909_at | Hs.632107 | DEAD (Asp-Glu-Ala-Asp) box polypeptide 6 | [NAME] |  | -1.690054605 | 0.038794703 |  |  |  | 243012_at | Hs.471162 | [NAME] association (RalGDS/AF-6) and pleckstrin homology domains 1 | RAPH1 |  | -1.720461496 | 0.045162599
208753_s_at | Hs.524599 | nucleosome assembly protein 1-like 1 | NAP1L1 |  | -1.689565059 | 0.004775318 |  |  |  | 1561720_at | Hs.632229 | [NAME] protein-like 5 | RECQL5 |  | -1.686340869 | 0.015866602
236812_at | Hs.201058 | stathmin-like 4 | STMN4 |  | -1.689037538 | 0.012169061 |  |  |  | 239744_at | Hs.494875 | Regulator of G-protein signalling 3 | RGS3 |  | -2.071724001 | 0.00291111
208900_s_at | Hs.592136 | topoisomerase (DNA) I | TOP1 |  | -1.687128729 | 0.027148222 |  |  |  | 200869_at | Hs.337766 | ribosomal protein L18a | RPL18A |  | -1.653529671 | 0.003902422
212567_s_at | Hs.517949 | microtubule-associated protein 4 | MAP4 |  | -1.683163744 | 0.020126922 |  |  |  | 212044_s_at | Hs.523463 | Ribosomal protein L27a | RPL27A |  | -1.755140353 | 0.001941352
1561720_at | Hs.632229 | [NAME] protein-like 5 | RECQL5 |  | -1.678431462 | 0.004696748 |  |  |  | 203034_s_at | Hs.648069 | ribosomal protein L27a | RPL27A |  | -1.681941615 | 0.004146756
221700_s_at | Hs.5308 | ubiquitin A-52 residue ribosomal protein fusion product 1 | UBA52 |  | -1.6752209 | 0.000425168 |  |  |  | 201406_at | [NAME] | ribosomal protein L36a | RPL36A |  | -1.579021634 | 0.011826984
222024_s_at | Hs.459211 | A kinase (PRKA) anchor protein 13 | AKAP13 |  | -1.674449781 | 0.002723354 |  |  |  | 203107_x_at | Hs.498569 | ribosomal protein S2 | [NAME] |  | -1.504871311 | 0.017486612
219236_at | [NAME] | progestin and adipoQ receptor family member VI | PAQR6 |  | -1.672100689 | 0.044668172 |  |  |  | 200834_s_at | Hs.190968 | ribosomal protein S21 | RPS21 |  | -1.658740458 | 0.000768715
217856_at | Hs.591455 | RNA binding motif protein 8A | RBM8A |  | -1.671035832 | 0.037638792 |  |  |  | 201094_at | Hs.156367 | ribosomal protein S29 | RPS29 |  | -1.562247946 | 0.018505205
225115_at | Hs.397465 | Homeodomain interacting protein kinase 2 | HIPK2 |  | -1.666254854 | 0.022170124 |  |  |  | 221472_at | Hs.272168 | serine incorporator 3 | SERINC3 |  | -1.621228199 | 0.046949403
217789_at | Hs.583855 | sorting nexin 6 | SNX6 |  | -1.661019495 | 0.013502868 |  |  |  | 1555495_a_at | Hs.371372 | serologically defined colon cancer antigen 10 | SDCCAG10 |  | -1.517361378 | 0.045596461
211813_x_at | Hs.156316 | decorin | DCN |  | -1.658747273 | 0.010970599 |  |  |  | 212465_at | Hs.510407 | SET domain containing 3 | SETD3 |  | -1.515962701 | 0.041137671
203238_s_at | Hs.8546 | Notch homolog 3 (Drosophila) | NOTCH3 |  | -1.658707627 | 0.029503162 |  |  |  | 200630_x_at | Hs.436687 | SET translocation (myeloid leukemia-associated) | SET |  | -1.62169764 | 0.004307753
241617_x_at |  |  |  |  | -1.654493154 | 0.034608788 |  |  |  | 210231_x_at | Hs.436687 | SET translocation (myeloid leukemia-associated) | SET |  | -1.589210203 | 0.006945911
203034_s_at | Hs.648069 | ribosomal protein L27a | RPL27A |  | -1.653172842 | 0.001048459 |  |  |  | 207069_s_at | Hs.153863 | [NAME] family member 6 | SMAD6 |  | -1.51391353 | 0.001734159
210231_x_at | Hs.436687 | SET translocation (myeloid leukemia-associated) | SET |  | -1.652141558 | 0.001074383 |  |  |  | 225155_at | Hs.292457 | small nucleolar RNA host gene (non-protein coding) 5 | SNHG5 |  | -1.847593173 | 0.009110435
201928_at | Hs.407580 | plakophilin 4 | [NAME] |  | -1.652126482 | 0.0021507 |  |  |  | 217789_at | Hs.583855 | sorting nexin 6 | SNX6 |  | -1.618641197 | 0.04109515
213252_at | Hs.594708 | SH3 and PX domains 2A | SH3PXD2A |  | -1.651654859 | 0.006007999 |  |  |  | 236812_at | Hs.201058 | stathmin-like 4 | STMN4 |  | -1.732684783 | 0.025690874
235446_at |  | X (inactive)-specific transcript, antisense | TSIX |  | -1.650597749 | 0.045807494 |  |  |  | 212845_at | Hs.98259 | sterile alpha motif domain containing 4A | SAMD4A |  | -1.690600008 | 0.049856667
1559402_a_at | Hs.380027 | chromosome 1 open reading frame 61 | C1orf61 |  | -1.649731119 | 0.046974458 |  |  |  | 1553094_at | Hs.434138 | [NAME] (hemokinin) | TAC4 |  | -1.600061725 | 0.039916912
232975_at | Hs.283315 | HLA complex group 18 | HCG18 |  | -1.644694516 | 0.026536971 |  |  |  | 1553118_at | Hs.164070 | thioesterase superfamily member 4 | THEM4 |  | -1.506475124 | 0.00813409
200630_x_at | Hs.436687 | SET translocation (myeloid leukemia-associated) | SET |  | -1.644171816 | 0.000706018 |  |  |  | 202125_s_at | Hs.152774 | trafficking protein, [NAME] binding 2 | TRAK2 |  | -1.825258137 | 0.012279591
219028_at | Hs.397465 | homeodomain interacting protein kinase 2 | HIPK2 |  | -1.643877668 | 0.012286467 |  |  |  | 238573_at | Hs.194081 | Transcribed locus |  |  | -1.895555164 | 0.020035174
225923_at | Hs.595403 | CDNA FLJ41394 fis, clone BRCAN2026197 |  |  | -1.641899478 | 0.012278002 |  |  |  | 229803_s_at | Hs.597332 | Transcribed locus |  |  | -1.606798736 | 0.014648017
214761_at | Hs.530930 | zinc finger protein 423 | ZNF423 |  | -1.641027737 | 0.00438232 |  |  |  | 227274_at | Hs.593463 | Transcribed locus |  |  | -1.566863437 | 0.03822491
229803_s_at | Hs.597332 | Transcribed locus |  |  | -1.638855718 | 0.003466983 |  |  |  | 227547_at | Hs.145500 | Transcribed locus |  |  | -1.523429087 | 0.049878309
223075_s_at | Hs.4944 | chromosome 9 open reading frame 58 | C9orf58 |  | -1.635239098 | 0.015147133 |  |  |  | 209747_at | Hs.592317 | transforming growth factor, beta 3 | TGFB3 |  | -2.206035999 | 0.016425215
1555495_a_at | Hs.371372 | serologically defined colon cancer antigen 10 | SDCCAG10 |  | -1.633694355 | 0.010098496 |  |  |  | 224836_at | Hs.516994 | tumor protein p53 inducible nuclear protein 2 | TP53INP2 |  | -1.513926842 | 0.038580876
1555063_at | Hs.448851 | ubiquitin specific peptidase 6 (Tre-2 oncogene) | USP6 |  | -1.629960702 | 0.033820741 |  |  |  | 221700_s_at | Hs.5308 | ubiquitin A-52 residue ribosomal protein fusion product 1 | UBA52 |  | -1.606962015 | 0.002559508
241633_x_at | [NAME] | Nuclear factor I/X (CCAAT-binding transcription factor) | NFIX |  | -1.626634865 | 0.017835934 |  |  |  | 214662_at | Hs.169863 | WD repeat domain 43 | WDR43 |  | -1.56068764 | 0.02961066
229735_s_at | Hs.523442 | NIPA-like domain containing 3 | NPAL3 |  | -1.624868977 | 0.037251577 |  |  |  | 211992_at | Hs.356604 | WNK lysine deficient protein kinase 1 | [NAME] |  | -1.80109 | 0.021692217
241091_at | Hs.527515 | Transcribed locus |  |  | -1.621983021 | 0.028155505 |  |  |  | 221728_x_at | Hs.529901 | X (inactive)-specific transcript | XIST |  | -7.875449645 | 0.027129221
209715_at | Hs.632724 | chromobox homolog 5 (HP1 alpha homolog, Drosophila) | CBX5 |  | -1.620512831 | 0.014704732 |  |  |  | 235446_at |  | X (inactive)-specific transcript, antisense | TSIX |  | -1.803625514 | 0.030113394
227748_at |  | RNA binding motif protein, X-linked-like 1 | RBMXL1 |  | -1.619968046 | 0.042995132 |  |  |  | 226484_at | Hs.409561 | zinc finger and BTB domain containing 47 | [NAME] |  | -1.748719501 | 0.028710671
223469_at | Hs.131776 | pyroglutamyl-peptidase I | PGPEP1 |  | -1.61955007 | 0.00800139 |  |  |  | 225394_s_at | Hs.496279 | zinc finger CCHC-type and RNA binding motif 1 | [NAME] |  | -1.539955014 | 0.032916468
200869_at | Hs.337766 | ribosomal protein L18a | RPL18A |  | -1.6189039 | 0.001069229 |  |  |  | 214761_at | Hs.530930 | zinc finger protein 423 | ZNF423 |  | -1.625248475 | 0.016524947
233734_s_at | Hs.436166 | [NAME]like 5 | OSBPL5 |  | -1.61758832 | 0.04033746 |  |  |  | 222968_at |  |  |  |  | -1.680354796 | 0.022925014
219689_at | Hs.59729 | sema domain, immunoglobulin domain (Ig), 3G | SEMA3G |  | -1.616398454 | 0.044179229 |  |  |  | 242987_x_at |  |  |  |  | -1.523674587 | 0.024815773
205766_at | Hs.514146 | titin-cap (telethonin) | TCAP |  | -1.61630543 | 0.017911589
217322_x_at |  |  |  |  | -1.613424931 | 0.022186461
201094_at | Hs.156367 | ribosomal protein S29 | RPS29 |  | -1.61023614 | 0.004149928
1556392_a_at | Hs.145517 | CDNA clone IMAGE:5285271 |  |  | -1.610231548 | 0.000315042
225155_at | Hs.292457 | small nucleolar RNA host gene (non-protein coding) 5 | SNHG5 |  | -1.609758577 | 0.024045374
225684_at | Hs.463607 | family with sequence similarity 33, member A | FAM33A |  | -1.602990387 | 0.000984463
239754_at | Hs.368934 | non-protein coding RNA 188 | NCRNA00188 |  | -1.602806492 | 0.018011882
205973_at | Hs.224008 | fasciculation and elongation protein zeta 1 (zygin I) | FEZ1 |  | -1.601558319 | 0.027775031
201306_s_at | Hs.494604 | [NAME] (leucine-rich) nuclear phosphoprotein 32 family, member B | ANP32B |  | -1.600203006 | 0.010434335
201305_x_at | Hs.494604 | [NAME] (leucine-rich) nuclear phosphoprotein 32 family, member B | ANP32B |  | -1.598188574 | 0.015800852
220755_s_at | Hs.640836 | chromosome 6 open reading frame 48 | C6orf48 |  | -1.598049715 | 0.01188859
206397_x_at | Hs.412355 | growth differentiation factor 1 /// LAG1 homolog, ceramide synthase 1 | GDF1 /// LASS1 |  | -1.596839442 | 0.00968901
240305_at | Hs.432397 | DIP2 disco-interacting protein 2 homolog C (Drosophila) | DIP2C |  | -1.595729728 | 0.00831423
239481_at | Hs.110069 | hypothetical protein FLJ37659 | RP1-32F7.2 |  | -1.59373754 | 0.01505314
226533_at | Hs.72325 | histidine triad nucleotide binding protein 3 | HINT3 |  | -1.5926103 | 0.037451928
216671_x_at | Hs.592357 | mucin 8 | MUC8 |  | -1.592304394 | 0.032010004
232220_at | Hs.442337 | S100 calcium binding protein A7A | S100A7A |  | -1.591464886 | 0.029175096
236576_at | Hs.21375 | Transcribed locus |  |  | -1.585242603 | 0.047722271
243064_at | Hs.534582 | Mitochondrial translational initiation factor 3 | MTIF3 |  | -1.584824472 | 0.014886783
207661_s_at | Hs.594708 | SH3 and PX domains 2A | SH3PXD2A |  | -1.583766354 | 0.023743493
226084_at | Hs.584777 | microtubule-associated protein 1B | MAP1B |  | -1.579321823 | 0.006514056
227466_at | Hs.399980 | hypothetical protein LOC285550 | LOC285550 |  | -1.577300011 | 0.017586335
1558654_at | Hs.435479 | Protein phosphatase 1H (PP2C domain containing) | PPM1H |  | -1.576127641 | 0.006617132
207555_s_at | Hs.442530 | thromboxane A2 receptor | TBXA2R |  | -1.575618166 | 0.034683959
230200_at | Hs.396175 | NOL1/NOP2/Sun domain family, member 6 | NSUN6 |  | -1.571136978 | 0.016641398
206500_s_at | Hs.437941 | chromosome 14 open reading frame 106 | C14orf106 |  | -1.570334303 | 7.35403e-05
207186_s_at | Hs.444200 | bromodomain PHD finger transcription factor | BPTF |  | -1.570237954 | 0.011342075
205178_s_at | Hs.188553 | retinoblastoma binding protein 6 | [NAME] |  | -1.569767339 | 0.023180007
1558685_a_at | Hs.553131 | hypothetical protein BC009467 | LOC158960 |  | -1.560520338 | 0.02299911
224836_at | Hs.516994 | tumor protein p53 inducible nuclear protein 2 | TP53INP2 |  | -1.560362183 | 0.010892844
222968_at |  |  |  |  | -1.552837651 | 0.023453757
232404_at | Hs.420541 | shroom family member 4 | SHROOM4 |  | -1.55064454 | 0.048568774
242987_x_at |  |  |  |  | -1.549343856 | 0.006563521
235293_at | Hs.417630 | CDNA FLJ37816 fis, clone BRSSN2003093 |  |  | -1.546236067 | 0.019599152
226975_at | Hs.632430 | RNA-binding region (RNP1, RRM) containing 3 | RNPC3 |  | -1.542208631 | 0.031254932
202549_at | Hs.182625 | VAMP (vesicle-associated membrane protein)-associated protein B and C | VAPB |  | -1.541481475 | 0.022085543
1559479_at | [NAME] | Hypothetical protein LOC285540 | LOC285540 |  | -1.541377166 | 0.029421205
226500_at | Hs.409561 | zinc finger and BTB domain containing 47 | [NAME] |  | -1.537262409 | 0.001375635
1558236_at |  |  |  |  | -1.537063689 | 0.002844544
236704_at | Hs.584841 | Phosphodiesterase 4D interacting protein (myomegalin) | PDE4DIP |  | -1.535509112 | 0.036790358
209119_x_at | Hs.651199 | nuclear receptor subfamily 2, group F, member 2 | NR2F2 |  | -1.534128273 | 0.004631187
243135_x_at | Hs.594383 | MRNA; cDNA DKFZp761E1721 (from clone DKFZp761E1721) |  |  | -1.532527408 | 0.017922422
227274_at | Hs.593463 | Transcribed locus |  |  | -1.531936855 | 0.018617096
203170_at | Hs.511948 | KIAA0409 | KIAA0409 |  | -1.527033023 | 0.042544957
221892_at | Hs.463511 | hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase) | H6PD |  | -1.526860828 | 0.039488599
223788_at |  |  |  |  | -1.526657061 | 0.019420225
204020_at | Hs.443121 | purine-rich element binding protein A | PURA |  | -1.526561286 | 0.040212493
214394_x_at | Hs.333388 | eukaryotic translation elongation factor 1 delta | EEF1D |  | -1.5240849 | 0.023872111
212465_at | Hs.510407 | SET domain containing 3 | SETD3 |  | -1.523900299 | 0.014444186
221472_at | Hs.272168 | serine incorporator 3 | SERINC3 |  | -1.523779176 | 0.039224052
244630_at |  |  |  |  | -1.52179761 | 0.018721105
210341_at | Hs.279562 | [NAME] transcription factor 1 | [NAME] |  | -1.521181642 | 0.001167569
201051_at | Hs.458747 | [NAME] (leucine-rich) nuclear phosphoprotein 32 family, member A | ANP32A |  | -1.52079073 | 0.030293334
1558088_a_at | Hs.302903 | ubiquitin-conjugating enzyme E2I (UBC9 homolog, yeast) | UBE2I |  | -1.519895023 | 0.03483838
235021_at |  | KIAA2026 | KIAA2026 |  | -1.519337401 | 0.027387169
207323_s_at | Hs.551713 | [NAME] basic protein | MBP |  | -1.515355067 | 0.023457905
214464_at | Hs.35433 | CDC42 binding protein kinase alpha (DMPK-like) | CDC42BPA |  | -1.514889489 | 0.029643786
1554447_at | [NAME] | hypothetical LOC554203 | LOC554203 |  | -1.51354208 | 0.011210751
207069_s_at | Hs.153863 | [NAME] family member 6 | SMAD6 |  | -1.513041461 | 0.000260465
216933_x_at | Hs.158932 | adenomatosis polyposis coli | APC |  | -1.511393459 | 0.003863234
231818_x_at | Hs.651183 | Solute carrier family 20 (phosphate transporter), member 2 | SLC20A2 |  | -1.509533848 | 0.040434717
208797_s_at |  | golgi autoantigen, golgin subfamily a, 8B | GOLGA8B |  | -1.508269387 | 0.0017322
218859_s_at | Hs.369284 | ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae) | ESF1 |  | -1.508010845 | 0.007625111
227567_at | Hs.293560 | Archaemetzincins-2 | AMZ2 |  | -1.507577744 | 0.045488997
212566_at | Hs.517949 | microtubule-associated protein 4 | MAP4 |  | -1.506775795 | 0.015121048
222835_at | Hs.387057 | thrombospondin, type I, domain containing 4 | THSD4 |  | -1.505464387 | 0.046876948
1554287_at | Hs.50749 | tripartite motif-containing 4 | TRIM4 |  | -1.505312031 | 0.003808271
1569099_at | Hs.512440 | Homo sapiens, clone IMAGE:4861097, mRNA |  |  | -1.501671833 | 0.023590177