Spreadsheet: 0d5f1d58-cb30-4d3d-966c-831b87eb8a38
Sheet: Sheet1

Unnamed: 0 | Unnamed: 1 | Unnamed: 2 | Unnamed: 3 | Unnamed: 4 | Unnamed: 5 | Unnamed: 6 | Unnamed: 7 | Unnamed: 8 | Unnamed: 9 | Unnamed: 10 | Unnamed: 11 | Unnamed: 12 | Unnamed: 13 | Unnamed: 14
 | Supplemental Table S2: Overview of genes previously published as b-regulated
 |  | Gene (MUMDB)1 | Probe Set2 | Annotation (MUMDB)3 | AB314 |  | match(h)5 | AB334 |  | match (h)5 | Name6 | described b-regulation7 | time-point8 | References9
 | 1 | um10156 | w95um033G_at | probable proteine disulfate isomerase | 1.890959391992877 |  | 12 | 1.678871068156888 |  | 5 | frb23 | + | 5h | (a)
 | 2 | um10529.2 | w35um030G_at | Pcl12 | 49.09006433166547 | * | 12 | 10.22466367713004 | * | 3 | frb63 | +++ | 5h | (a)
 | 3 | um00695 | c10um163G_at | putative exochitinase | 13.45206006931074 | * | 12 | 5.651227678571429 | * | 3 | frb133 | +++ | 5h | (a)
 | 4 | um04771 | c22um278G_at | related to KHA1 - Putative K+/H+ antiporter | 14.04968469329257 | * | 12 | 5.444444444444445 | * | 5 | [NAME] | +++ | 5h | (a)
 | 5 | um05785 | w35um256G_at | acyl transferase-like protein | -13.48745844666062 | * | 12 | -23.85667539267016 | * | 12 | [NAME] | -- | 5h | (a)
 | 6 | um06332 | c65um198G_at | endoglucanase 1 precursor (egl1) | 145.5263157894737 | * | 12 | 23.80281207133059 | * | 12 | egl1 | ++ | 6h | (b)
 | 7 | um02331 | w155um044G_at | MAP kinase | 16.73070175438597 | * | 12 | 5.799557032115172 | * | 5 | kpp6 | ++ | 6h | (b)
 | 8 | um02549 | W55um154G_at | b-induced zinc finger protein | 44.51685393258427 | * | 12 | 70.34453781512605 | * | 12 | biz1 | +++ | 12h | (c)
 | 9 | um01262 | w85um010G_at | DNA polymerase X - putative | 50.91539153915392 | * | 5 | 35.40740740740741 | * | 3 | frb52 | +++ | 5h | (a)
 | 10 | um05782 | w21um256G_at | capsule-associated protein-like protein | -6.282495667244367 | * | 12 | -8.426754385964912 | * | 12 | frb136 | -- | 1h | (a)
 | 12 | um01205 | w45um018G_at | cation-transporting ATPase | 1.044600903951431 |  | 0 | -6.918607112616427 |  | 0 | frb323 | -- | 1h | (a)
 | 13 | um03658 | W45um213G_at | conserved hypothetical protein | -7.363484087102178 | * | 12 | -6.863247863247863 | * | 12 | frb110 | -- | 5h | (a)
 | 14 | um03924 | w120um002G_at | repellent protein 1 precursor | 76.43013698630136 | * | 12 | 74.74394237066143 | * | 3 | rep1 | +++ | 6h | (b)
 | 16 | um11562 | W70um170G_at | hydrophobin 2 | 1.27236842105263 |  | 5 | 1.469957081545064 |  | 5 | [NAME] | ++ | plate | (d)
 | 17 | um00792 | W80um148G_at | conserved hypothetical Ustilago-specific protein | 4.140039447731755 | * | 12 | 7.724770642201835 | * | 12 | dik1 | +++ | plate | (d)
 | 18 | lga2 | lga2_at | lga2 | 146.8986866791745 | * | 3 | 109.2839673913044 | * | 3 | lga2 | +++ | 5h | (e)
 | 19 | um04130 | C65um025G_at | Dik6, novel virulence factor | 36.23206377325066 | * | 5 | 36.9694614103276 | * | 3 | dik6 | +++ | 6h | (b)
 | 20 | um02438 | C115um033G_at | related to clp1, essential for A-regulated sexual development | 79.8252427184466 | * | 3 | 55.48395061728394 | * | 5 | clp1 | +++ | 6h | (b)
 |  | Index
 |  | 1) Genes and annotations are derived from MUMDB (http://mips.gsf.de/genre/proj/ustilago/)
 |  | 2) Probe Set on Affymetrix custom array UstilagoA defines region for detection of corresponding genes (http://mips.gsf.de/genre/proj/ustilago/)
 |  | 3) Annotation according to MUMDB (http://mips.gsf.de/genre/proj/ustilago/)
 |  | 4) Maximimum fold induction/repression
 |  | 5) Time point of highest fold induction/repression
 |  | 6) Gene name as described in literature
 |  | 7) Gene regulation according to [NAME], [NAME],  [NAME]. Microbiol. 42 (4), 1047 (2001).
 |  | 8) Time after b-induction according to 9
 |  | 9) | a) [NAME], [NAME],  [NAME]. Microbiol. 42 (4), 1047 (2001).
 |  |  | b) Scherer, [NAME],  Plant Cell 18 (9), 2388 (2006).
 |  |  | c) Flor-Parra, [NAME],  Plant Cell 18 (9), 2369 (2006).
 |  |  | d) [NAME], R., PhD thesis, Munich: Institute for Genetics, Ludwig-Maximiliaans University, (1996)
 |  |  | e) Romeis, T et al., [NAME]. 2000 Jul;37(1):54-66