Spreadsheet: 195633c0-6d44-4916-b68f-24e9dc6ffbe5
Sheet: Sheet1

Table S4. Genes identified with eQTL in INOC and MOCK at the Rpg-TTKSK locus. | Unnamed: 1 | Unnamed: 2 | Unnamed: 3 | Unnamed: 4 | Unnamed: 5 | Unnamed: 6 | Unnamed: 7 | Unnamed: 8 | Unnamed: 9 | Unnamed: 10 | Unnamed: 11 | Unnamed: 12 | Unnamed: 13 | Unnamed: 14 | Unnamed: 15 | Unnamed: 16 | Unnamed: 17 | Unnamed: 18 | Unnamed: 19 | Unnamed: 20 | Unnamed: 21
 |  |  |  | INOC vs MOCK |  |  | Parameter estimates for 5H eQTL in MOCK |  |  |  |  |  |  |  | Parameter estimates for 5H eQTL in INOC
Barley1 [NAME] Set | Identifier | Species | Annotation | log(FC) | p-value |  | LOD | r2 | a | Allele | Chr | Bin | cM |  | LOD | r2 | AEE | Allele | Chr | Bin | cM
AF026538_at | Q9ZTW0 | Hordeum vulgare | ABA-responsive protein | 0.1382864 | 0.001166028 |  | 6.83770988438 | 0.2166963 | -0.1322423 | SM | 5 | 50 | 148.12 |  | 5.25632976033 | 0.2362481 | -0.1162131 | SM | 5 | 50 | 148.12
Contig10630_at | Q94GE4 | Oryza sativa | Dex1 protein | -0.0146587 | 0.680372337 |  | 10.9191312089 | 0.3501875 | 0.1602477 | Q | 5 | 50 | 148.12 |  | 7.8960739194 | 0.2820887 | 0.11972 | Q | 5 | 50 | 148.12
Contig11039_at | A0FHA7 | H. vulgare | Multiple inositol polyphosphate phosphatase PhyIIa1 | -0.0498413 | 0.224717141 |  | 13.9849380368 | 0.4565486 | -0.200679 | SM | 5 | 48 | 145.43 |  | 18.9817540872 | 0.5900959 | -0.2054079 | SM | 5 | 48 | 145.43
Contig11179_at | Q94GF1 | O. sativa | Anthranilate synthase alpha 1 subunit | 0.0944685 | 0.226470766 |  | 35.5412903084 | 0.7886731 | -0.4367033 | SM | 5 | 50 | 148.12 |  | 32.5333863352 | 0.8492348 | -0.4774075 | SM | 5 | 50 | 148.12
Contig13447_s_at | Q0DM76 | O. sativa | Unknown protein | -0.1887564 | 3.41e-07 |  | 12.5018343025 | 0.4272699 | 0.133985 | Q | 5 | 49 | 146.78 |  | 9.62717661008 | 0.4353501 | 0.154789 | Q | 5 | 50 | 150.12
Contig14198_at | Os03g60790.1 | O. sativa | protein heat shock protein DnaJ, N-terminal, putative, expressed | -0.1054618 | 0.071939389 |  | 34.3627705837 | 0.7812229 | 0.299222 | Q | 5 | 50 | 148.12 |  | 32.0976777253 | 0.7603524 | 0.3368276 | Q | 5 | 50 | 148.12
Contig17228_at | Q84NS9 | O. sativa | Synbindin-like protein | -0.0702654 | 0.010253817 |  | 7.38814420008 | 0.2430278 | -0.0877914 | SM | 5 | 49 | 146.78 |  | 6.50578877436 | 0.2855873 | -0.0883008 | SM | 5 | 50 | 150.12
Contig18288_at | Q6ZC35 | O. sativa | Hec1 protein | 0.0201963 | 0.811706674 |  | 24.372266793 | 0.7377877 | -0.4433602 | SM | 5 | 48 | 145.43 |  | 20.8352141235 | 0.6658695 | -0.4361001 | SM | 5 | 50 | 150.12
Contig18288_s_at | Q6ZC35 | O. sativa | Hec1 protein | -0.0061923 | 0.914504082 |  | 18.8209799637 | 0.5778956 | -0.2913926 | SM | 5 | 49 | 146.78 |  | 18.9430289602 | 0.5874429 | -0.249257 | SM | 5 | 49 | 146.78
Contig18431_at | Os01g40750.1 | O. sativa | Unknown protein | -0.0470709 | 0.551339596 |  | 6.05063436847 | 0.1074002 | 0.1595668 | Q | 5 | 50 | 148.12 |  | 3.16977052106 | 0.0776786 | 0.1483803 | Q | 5 | 50 | 152.12
Contig21310_at | Q0E198 | O. sativa | Unknown protein | 0.0782966 | 0.101919242 |  | 12.9295896341 | 0.5276511 | 0.2292147 | Q | 5 | 50 | 148.12 |  | 10.4544185895 | 0.412059 | 0.178906 | Q | 5 | 50 | 148.12
Contig22744_at | n.a. | n.a. | n.a. | 0.32634 | 0.002696676 |  | 12.9788380203 | 0.5065612 | -0.540999 | SM | 5 | 46 | 143.41 |  | 20.5506296788 | 0.647258 | -0.4887877 | SM | 5 | 48 | 145.43
Contig23768_at | Q6ATM9 | O. sativa | Unknown protein | 0.0375266 | 0.669587762 |  | 34.4102220114 | 0.7885936 | -0.5365353 | SM | 5 | 50 | 148.12 |  | 31.1895371504 | 0.8133586 | -0.4616612 | SM | 5 | 50 | 148.12
Contig24605_at | Os03g59550.1 | O. sativa | RNA binding motif protein | -0.0045705 | 0.930183593 |  | 11.6329939256 | 0.4004906 | -0.3029668 | SM | 5 | 46 | 141.41 |  | 4.05841416173 | 0.1314749 | -0.1423062 | SM | 5 | 48 | 145.43
Contig26114_at | n.a. | n.a. | n.a. | -0.3565113 | 0.005351381 |  | 4.55109343489 | 0.1615269 | -0.3388143 | SM | 5 | 53 | 166.15 |  | 4.23126330039 | 0.1660408 | -0.3490729 | SM | 5 | 48 | 145.43
Contig26116_at | Q6ZD83 | O. sativa | Cytochrome P450 71C4 | 0.210954 | 0.003254898 |  | 6.28787116014 | 0.2462248 | -0.247913 | SM | 5 | 46 | 141.41 |  | 7.0202122602 | 0.2829261 | -0.20239 | SM | 5 | 50 | 150.12
Contig26172_at | Q10BA4 | O. sativa | Protein kinase domain containing protein | 0.1471788 | 0.193252742 |  | 5.66667181582 | 0.2840858 | -0.3835333 | SM | 5 | 50 | 148.12 |  | 15.2894392729 | 0.4824043 | -0.4783219 | SM | 5 | 50 | 148.12
Contig26580_at | n.a. | n.a. | n.a. | 0.0142687 | 0.840693871 |  | 20.9751182473 | 0.6468521 | 0.446277 | Q | 5 | 48 | 145.43 |  | 30.3170134569 | 0.6897964 | 0.3751953 | Q | 5 | 49 | 146.78
Contig320_at | Q9AVH2 | Pisum sativum | Senescence-associated protein | -0.1391143 | 0.049480982 |  | 5.2456336084 | 0.2135121 | 0.2150792 | Q | 5 | 52 | 157.01 |  | 9.59580940884 | 0.3762121 | 0.2479173 | Q | 5 | 48 | 145.43
Contig3502_at | Q00531 | H. vulgare | 60 kDa jasmonate-induced protein | 0.0628097 | 0.130633647 |  | 14.638269527 | 0.4552805 | 0.2148456 | Q | 5 | 49 | 146.78 |  | 10.9142101964 | 0.401896 | 0.1730022 | Q | 5 | 49 | 146.78
Contig4389_at | Os11g44870.2 | O. sativa | Unknown protein | 0.2945487 | 0.092317081 |  | 4.93553136628 | 0.2486658 | -0.5980628 | SM | 5 | 49 | 146.78 |  | 13.0043552532 | 0.46588 | -0.7517712 | SM | 5 | 50 | 150.12
Contig4391_at | Os11g44870.2 | O. sativa | Unknown protein | 0.2307821 | 0.359151906 |  | 20.920177281 | 0.5637977 | 1.2678516 | Q | 5 | 50 | 148.12 |  | 34.102662216 | 0.8606711 | 1.408971 | Q | 5 | 50 | 148.12
Contig4391_s_at | Os11g44870.2 | O. sativa | Unknown protein | 0.1836159 | 0.072900393 |  | 7.20899090787 | 0.2845264 | 0.374554 | Q | 5 | 47 | 144.08 |  | 10.3989420078 | 0.4127222 | 0.4037428 | Q | 5 | 50 | 148.12
Contig514_s_at | P22244 | H. vulgare | Protein synthesis inhibitor I | -0.2253017 | 0.000721663 |  | 7.83816541891 | 0.2776525 | -0.2345536 | SM | 5 | 48 | 145.43 |  | 6.80411505645 | 0.2269609 | -0.182971 | SM | 5 | 48 | 145.43
Contig5672_at | Os10g17454.2 | O. sativa | RNA binding motif protein | 0.0184973 | 0.630145064 |  | 3.88124852679 | 0.1457733 | -0.0815398 | SM | 5 | 53 | 166.15 |  | 4.52692585899 | 0.1847703 | -0.1178331 | SM | 5 | 48 | 145.43
Contig6668_s_at | Q852A3 | O. sativa | Unknown protein | -0.0113417 | 0.851901202 |  | 36.2924863903 | 0.7660684 | 0.3489472 | Q | 5 | 49 | 146.78 |  | 31.706988494 | 0.7239312 | 0.3376194 | Q | 5 | 49 | 146.78
Contig699_s_at | Q852C1 | O. sativa | Hypothetical protein | -0.0223645 | 0.642329633 |  | 26.3237435543 | 0.7127931 | 0.2539229 | Q | 5 | 50 | 148.12 |  | 20.0691168551 | 0.471925 | 0.2252627 | Q | 5 | 50 | 148.12
Contig7092_s_at | [NAME] | Triticum aestivum | WCOR719 (Adf3) | 0.7728857 | 0.006768286 |  | 33.5149051971 | 0.8006564 | -1.5119428 | SM | 5 | 49 | 146.78 |  | 47.4705219071 | 0.9336894 | -1.7998378 | SM | 5 | 49 | 146.78
Contig7327_at | Os03g60380.1 | O. sativa | [NAME] reductase | 0.0412126 | 0.525208109 |  | 31.8365403837 | 0.7706775 | 0.3615983 | Q | 5 | 48 | 145.43 |  | 29.7006418169 | 0.6898404 | 0.3289286 | Q | 5 | 48 | 145.43
Contig7641_at | Q84TW3 | O. sativa | Transcription elongation factor | -0.1506504 | 0.00262737 |  | 9.06934519534 | 0.3266575 | 0.2489962 | Q | 5 | 47 | 144.08 |  | 5.75287586127 | 0.2598564 | 0.1293333 | Q | 5 | 48 | 145.43
Contig8575_at | Q6Z4H7 | O. sativa | Pentatricopeptide (PPR) repeat-containing protein | -0.3489686 | 0.186845814 |  | 28.1733259706 | 0.8168397 | 1.5080651 | Q | 5 | 49 | 146.78 |  | 32.6435077378 | 0.780851 | 1.4814915 | Q | 5 | 49 | 146.78
Contig8701_at | Os03g61090.1 | O. sativa | Unknown protein | -0.211508 | 2.25e-09 |  | 3.92745270414 | 0.136065 | 0.0723883 | Q | 5 | 50 | 148.12 |  | 3.37670875819 | 0.1186656 | 0.0791974 | Q | 5 | 50 | 148.12
Contig9278_at | Q94D71 | O. sativa | Pectinacetylesterase | 0.063714 | 0.504713045 |  | 7.06682686755 | 0.1974648 | 0.2897935 | Q | 5 | 50 | 148.12 |  | 11.6166985235 | 0.4349457 | 0.4010168 | Q | 5 | 50 | 148.12
Contig9278_s_at | Q94D71 | O. sativa | Pectinacetylesterase | 0.0436374 | 0.627632803 |  | 7.36251296492 | 0.1683687 | 0.3007108 | Q | 5 | 50 | 150.12 |  | 17.7290682651 | 0.4489768 | 0.3657478 | Q | 5 | 50 | 148.12
Contig9839_at | Os03g60240.1 | O. sativa | SCAR-like protein 1 | -0.0780106 | 0.010753639 |  | 4.02196091609 | 0.160828 | 0.0918352 | Q | 5 | 47 | 144.08 |  | 3.94214308414 | 0.149846 | 0.0732966 | Q | 5 | 48 | 145.43
HC112E03_T3_s_at | Q9ZTW0 | H. vulgare | ABA-responsive protein | 0.0752425 | 0.38282269 |  | 27.1182194048 | 0.6415926 | -0.5468121 | SM | 5 | 50 | 148.12 |  | 40.9730632484 | 0.8786639 | -0.4945175 | SM | 5 | 50 | 148.12
HV10D05u_x_at | Os07g36940.2 | O. sativa | Actin-depolymerizing factor | -0.1589306 | 0.079105198 |  | 16.6472075741 | 0.5684919 | -0.3854223 | SM | 5 | 48 | 145.43 |  | 15.7840710689 | 0.619218 | -0.4785557 | SM | 5 | 49 | 146.78
HV14K24u_at | Q2L7E7 | H. vulgare | Cluster: Rust resistance gene ABC1041; n=1; Hordeum vulgare subsp. vulgare|Rep: Rust resistance gene ABC1041 - Hordeum vulgare var. [NAME] (Two-rowed barley) | -0.0996178 | 0.007233564 |  | 16.077127752 | 0.5971374 | -0.179427 | SM | 5 | 48 | 145.43 |  | 10.7663366602 | 0.4155557 | -0.1502529 | SM | 5 | 50 | 150.12
HVSMEb0007M11r2_s_at | Os07g24190.1 | O. sativa | Cellulose synthase A catalytic subunit 3 | -0.0688024 | 0.027656997 |  | 14.0597794186 | 0.4162543 | 0.1546469 | Q | 5 | 50 | 148.12 |  | 4.22758615072 | 0.1258245 | 0.0607679 | Q | 5 | 49 | 146.78
HVSMEg0006G02r2_s_at | Q9FFX7 | [NAME] | Alpha-mannosidase | 0.0571408 | 0.098651484 |  | 11.9269386541 | 0.3915935 | -0.1492336 | SM | 5 | 50 | 148.12 |  | 13.3735051719 | 0.3725232 | -0.1139043 | SM | 5 | 50 | 148.12
HVSMEm0005P18r2_at | Q84TA5 | O. sativa | Hypothetical protein | -0.0473639 | 0.26252776 |  | 14.7129038371 | 0.3714663 | -0.1583135 | SM | 5 | 48 | 145.43 |  | 18.8301443373 | 0.6222708 | -0.2189797 | SM | 5 | 48 | 145.43
HW06D02u_at | n.a. | n.a. | n.a. | -0.239963 | 0.017629174 |  | 8.80917426753 | 0.3362589 | -0.2967195 | SM | 5 | 47 | 144.08 |  | 4.65766443665 | 0.1742126 | -0.310092 | SM | 5 | 50 | 148.12
HZ58F11r_at | P22244 | H. vulgare | Protein synthesis inhibitor I | -0.1355977 | 0.2491621 |  | 18.2583156548 | 0.4977479 | 0.5294176 | Q | 5 | 48 | 145.43 |  | 18.6805865854 | 0.480875 | 0.5095993 | Q | 5 | 48 | 145.43
rbags18k24_x_at | [NAME] | [NAME] | 50S ribosomal protein L17, chloroplast precursor | -0.352419 | 0.00112466 |  | 11.0683079108 | 0.3134421 | 0.3791256 | Q | 5 | 45 | 139.34 |  | 9.3664888067 | 0.3201177 | 0.3788299 | Q | 5 | 48 | 145.43
rbah27g12_at | UPI0000E48B78 | Strongylocentrotus purpuratus | Hypothetical protein | -0.1260277 | 0.359031126 |  | 14.2994937951 | 0.4805344 | -0.5765609 | SM | 5 | 48 | 145.43 |  | 17.8478664372 | 0.5712053 | -0.6886564 | SM | 5 | 48 | 145.43
rbah27g12_s_at | UPI0000E48B78 | S. purpuratus | Hypothetical protein | -0.249529 | 0.108695739 |  | 19.4967040899 | 0.63919 | -0.7746943 | SM | 5 | 48 | 145.43 |  | 16.3018376668 | 0.5191667 | -0.7001744 | SM | 5 | 48 | 145.43