Spreadsheet: c26cdec6-be59-4002-adae-a59867b8909f
Sheet: Table S3 - Complex Enrichment

Supplementary Table 3.  Moehle et al. "The Yeast SR-like Protein Npl3 Links Chromatin Modification to mRNA processing"
GO-term analysis of npl3∆ synthetic interactions by Complex
[NAME] | [NAME] | Adjusted P-value | P-value | #NPL3 Interactors | #Tested Interactors | Interacting Gene Names
Swr1p complex | SWR-C | 0 | 1.08210844834e-06 | 5 | 8 | SWC3,ARP6,VPS71,SWR1,VPS72
commitment complex | Commitment Complex | 0 | 2.20614887795e-05 | 5 | 13 | MUD2,NAM8,STO1,SMD2,CBC2
COMPASS complex | COMPASS | 0 | 2.36385538436e-05 | 4 | 7 | SDC1,SPP1,SET1,BRE2
Ski Complex | Ski Complex | 0.003 | 2.50735230864e-05 | 3 | 3 | SKI8,SKI3,SKI2
RES complex | RES | 0.003 | 2.50735230864e-05 | 3 | 3 | [NAME],IST3,BUD13
RAD6/BRE1/LGE1 | RAD6-C | 0.003 | 2.50735230864e-05 | 3 | 3 | [NAME],BRE1
Golgi transport complex | COG-C | 0.005 | 0.000239999025555 | 3 | 5 | COG8,COG6,COG5
SAGA complex | SAGA | 0.007 | 0.000420388820559 | 4 | 13 | SPT8,SPT3,ADA2,GCN5
Cdc73p/Paf1p complex | PAF-C | 0.014 | 0.00046962972993 | 3 | 6 | LEO1,PAF1,CDC73
Set3p complex | SET3-C | 0.021 | 0.000804123111994 | 3 | 7 | SIF2,HOS2,SET3
Rad6p/Rad18p complex |  | 0.128 | 0.000862424721158 | 2 | 2 | RAD18,YGL058W
SBF complex |  | 0.128 | 0.000862424721158 | 2 | 2 | [NAME]
Sac3p/Thp1p complex |  | 0.128 | 0.000862424721158 | 2 | 2 | THP1,SAC3
Lge1p/Bre1p complex |  | 0.128 | 0.000862424721158 | 2 | 2 | LGE1,BRE1
Gcn1p/Gcn20p complex |  | 0.128 | 0.000862424721158 | 2 | 2 | GCN1,GCN20
U2 snRNP complex |  | 0.141 | 0.00184769528649 | 3 | 9 | IST3,LEA1,SMD2
SLIK (SAGA-like) complex |  | 0.278 | 0.0034752316227 | 3 | 11 | SPT3,ADA2,GCN5
Rpd3L complex |  | 0.284 | 0.00453436664206 | 3 | 12 | PHO23,SAP30,SIN3
THO complex |  | 0.377 | 0.00497613230328 | 2 | 4 | YML062C,YHR167W
U4/U6 x U5 tri-snRNP complex |  | 0.383 | 0.00576855998851 | 3 | 13 | SNU66,LSM7,SMD2
Ada2p/Gcn5p/Ada3 transcription activator complex |  | 0.459 | 0.00813355448844 | 2 | 5 | ADA2,GCN5
U1 snRNP complex |  | 0.628 | 0.0270984088468 | 2 | 9 | NAM8,SMD2
Sds22p/Glc7p complex |  | 0.93 | 0.0294651866801 | 1 | 1 | GLC7
MBF complex |  | 1 | 0.0580679486391 | 1 | 2 | [NAME]
Reg1p/Glc7p complex |  | 1 | 0.0580679486391 | 1 | 2 | GLC7
Chz1p/Htz1p/Htb1p complex |  | 1 | 0.0580679486391 | 1 | 2 | YOL012C
Reg2p/Glc7p complex |  | 1 | 0.0580679486391 | 1 | 2 | GLC7
guanyl-nucleotide exchange factor complex |  | 1 | 0.0580679486391 | 1 | 2 | RIC1
alpha-1,6-mannosyltransferase complex(Van1p/Mnn9p) |  | 1 | 0.0580679486391 | 1 | 2 | VAN1
TRAMP complex (Air2p) |  | 1 | 0.0580679486391 | 1 | 2 | AIR2
Gac1p/Glc7p complex |  | 1 | 0.0580679486391 | 1 | 2 | GLC7
Bud14p/Glc7p complex |  | 1 | 0.0580679486391 | 1 | 2 | GLC7
eIF2B |  | 1 | 0.0580679486391 | 1 | 2 | GCN3
Mks1p/Rtg2p complex |  | 1 | 0.0580679486391 | 1 | 2 | MKS1
RNA Degradation Complex |  | 1 | 0.0580679486391 | 1 | 2 | RTT103
MSH2p/MSH6p complex |  | 1 | 0.0580679486391 | 1 | 2 | MSH6
GAL3p/GAL80p complex |  | 1 | 0.0580679486391 | 1 | 2 | GAL3
Fig4p/Vac14p complex |  | 1 | 0.0580679486391 | 1 | 2 | VAC14
Gip1p/Glc7p complex |  | 1 | 0.0580679486391 | 1 | 2 | GLC7
Slx5p/Slx8p complex |  | 1 | 0.0580679486391 | 1 | 2 | HEX3
Bni4p/Glc7p complex |  | 1 | 0.0580679486391 | 1 | 2 | GLC7
Kornberg's mediator (SRB) complex |  | 1 | 0.06224370576 | 2 | 14 | SOH1,CSE2
Ctf3p protein complex |  | 1 | 0.0858333594 | 1 | 3 | MCM16
Atg20p/Snx4p/Snx41p complex |  | 1 | 0.0858333594 | 1 | 3 | SNX41
carboxy-terminal domain protein kinase complex |  | 1 | 0.0858333594 | 1 | 3 | CTK2
TRAPP complex |  | 1 | 0.0858333594 | 1 | 3 | GSG1
karyopherin docking subcomplex of the Nuclear Pore Complex (NPC) |  | 1 | 0.0858333594 | 1 | 3 | NUP170
U6 snRNP complex |  | 1 | 0.112785768432 | 1 | 4 | LSM7
[NAME] complex |  | 1 | 0.112785768432 | 1 | 4 | SMD2
DNA-directed RNA polymerase I complex |  | 1 | 0.112785768432 | 1 | 4 | RPA34
retromer complex |  | 1 | 0.138948821918 | 1 | 5 | VPS29
Rpd3S complex |  | 1 | 0.138948821918 | 1 | 5 | SIN3
mRNA cleavage and polyadenylation specificity factor complex |  | 1 | 0.164345482928 | 1 | 6 | GLC7
NuA4 histone acetyltransferase complex |  | 1 | 0.164345482928 | 1 | 6 | EAF7
signalosome complex |  | 1 | 0.164345482928 | 1 | 6 | CSN12
19/22S regulator |  | 1 | 0.188998051021 | 1 | 7 | SEM1
Nuclear exosome complex |  | 1 | 0.188998051021 | 1 | 7 | [NAME]
Prp19-associated complex |  | 1 | 0.188998051021 | 1 | 7 | SNT309
cytoplasmic ribosomal small subunit |  | 1 | 0.395062868831 | 2 | 46 | ASC1,RPS18A
cytoplasmic ribosomal large subunit |  | 1 | 0.854353490282 | 1 | 64 | RPL42A