Spreadsheet: 0d8807fd-87fd-40ad-b5f1-17f3d59f56d0
Sheet: btaY.3GF.uniq.both

 | ZNF280AY |  |  | Additional file 3.  Deep sequencing read-pairs counting results for locus-speific expression of the ZNF280BY and ZNF280AY gene families.
 | Gene family member | uniqHits 2mm | uniqHits exact | Copy No. of ZNF280AY | Unique read pairs with 2 mismatches ([NAME]) | Unique read pairs with 1 mismatch ([NAME]) | Unique read pairs, perfect match ([NAME]) | Unique read pairs with 2 mismatches | Unique read pairs with 1 mismatch | Unique read pairs, perfect match
 | AC239693 | 115 | 84 | 8 |  |  |  | 49 | 45 | 31
 | AC213701 | 126 | 87 | 3 |  |  |  | 42 | 38 | 21
 | AC157133 | 107 | 74 | 4 |  |  |  | 32 | 27 | 16
 | AC213442 | 66 | 49 | 6 |  |  |  | 25 | 25 | 14
 | AC217001 | 88 | 52 | 3 |  |  |  | 24 | 23 | 12
 | AC166505 | 102 | 66 | 2 |  |  |  | 27 | 21 | 16
AC225835_1 | AC225835 | 92 | 36 | 2 |  |  |  | 30 | 19 | 5
 | AC161980 | 71 | 41 | 1 |  |  |  | 15 | 14 | 9
 | AC165011 | 34 | 28 | 1 |  |  |  | 14 | 14 | 8
 | AC213392 | 33 | 23 | 4 |  |  |  | 12 | 12 | 8
 | AC238841 | 22 | 11 | 6 |  |  |  | 11 | 11
 | AC232286 | 22 | 13 | 1 |  |  |  | 11 | 9 | 4
 | AC213707 | 17 | 15 | 2 |  |  |  | 7 | 7 | 5
 | AC237559 | 18 | 13 | 1 |  |  |  | 7 | 7 | 5
 | AC232760 | 34 | 11 | 3 |  |  |  | 9 | 6 | 3
 | AC161642 | 12 | 6 | 2 |  |  |  | 6 | 6
 | AC213721 | 8 | 8 | 2 |  |  |  | 4 | 4 | 4
 | AC213447 | 8 | 4 | 3 |  |  |  | 4 | 4
 | AC213449 | 8 | 4 | 4 |  |  |  | 4 | 4
 | AC226192 | 8 | 4 | 2 |  |  |  | 4 | 4
 | AC235955 | 9 | 4 | 1 |  |  |  | 4 | 4
 | AC216761 | 6 | 6 | 1 |  |  |  | 3 | 3 | 3
 | AC177810 | 11 | 9 | 3 |  |  |  | 3 | 3 | 2
 | AC213443 | 6 | 3 | 4 |  |  |  | 3 | 3
 | AC213445 | 14 | 8 | 1 |  |  |  | 4 | 3
 | AC232994 | 5 | 3 | 2 |  |  |  | 2 | 2 | 1
 | AC167351 | 15 | 3 | 1 |  |  |  | 5 | 2
 | AC226433 | 4 | 2 | 1 |  |  |  | 2 | 2
 | AC225934 | 8 | 3 | 2 |  |  |  | 1 | 1 | 1
 | AC172950 | 2 | 1 | 1 |  |  |  | 1 | 1
 | AC213714 | 2 | 1 | 1 |  |  |  | 1 | 1
 | AC214856 | 2 | 1 | 3 |  |  |  | 1 | 1
 | AC231446 | 6 | 1 | 1 |  |  |  | 1 | 1
 | AC157430 | 2 | 0 | 1 |  |  |  | 0 | 0
 | AC214585 | 12 | 1 | 1 |  |  |  | 2 | 0
 | AC215832 | 49 | 8 | 2 |  |  |  | 4 | 0
 | AC232767 | 7 | 1 | 1 |  |  |  | 1 | 0
 | AC234147 | 4 | 0 | 2 |  |  |  | 2 | 0
 | AC234909 | 5 | 4 | 2 |  |  |  | 0 | 0
 | ZNF280BY
 | Gene family member | uniqHits 2mm | uniqHits exact | Copy no. of ZNF280BY | Unique read pairs with 2 mismatches ([NAME]) | Unique read pairs with 1 mismatch ([NAME]) | Unique read pairs, perfect match ([NAME]) | Unique read pairs with 2 mismatches | Unique read pairs with 1 mismatch | Unique read pairs, perfect match
AC213701_1_543 | AC213701 | 1294 | 931 | 2 |  |  |  | 470 | 429 | 288
AC226192_1_543 | AC226192 | 1774 | 934 | 4 |  |  |  | 557 | 408 | 194
AC217001_2_431 | AC217001 | 1188 | 560 | 3 |  |  |  | 418 | 339 | 84
[NAME] | AC160813 | 996 | 583 | 3 |  |  |  | 403 | 333 | 141
AC214585_1_432 | AC214585 | 1602 | 365 | 1 |  |  |  | 568 | 206 | 31
AC231395_2_543 | AC231395 | 706 | 458 | 2 |  |  |  | 229 | 202 | 117
AC213704_1_543 | AC213704 | 1196 | 396 | 3 |  |  |  | 360 | 190 | 25
AC166505_1_543 | AC166505 | 831 | 302 | 2 |  |  |  | 250 | 176 | 70
AC165011_1_543 | AC165011 | 2022 | 1584 | 1 |  |  |  | 139 | 128 | 80
AC233798_1_543 | AC233798 | 467 | 308 | 2 |  |  |  | 152 | 119 | 81
AC213449_1_543 | AC213449 | 466 | 272 | 1 |  |  |  | 147 | 119 | 76
[NAME] | AC225912 | 454 | 214 | 5 |  |  |  | 153 | 108 | 50
AC226433_2_543 | AC226433 | 383 | 223 | 1 |  |  |  | 121 | 101 | 65
AC161980_1_378 | AC161980 | 359 | 158 | 1 |  |  |  | 133 | 89 | 34
AC214856_1_543 | AC214856 | 195 | 92 | 4 |  |  |  | 97 | 87 | 5
AC232767_1_432 | AC232767 | 368 | 171 | 1 |  |  |  | 124 | 77 | 26
AC216718_2_543 | AC216718 | 227 | 144 | 1 |  |  |  | 88 | 74 | 38
AC167351_1_222 | AC167351 | 355 | 157 | 1 |  |  |  | 68 | 55 | 22
AC232942_1_492 | AC232942 | 169 | 55 | 1 |  |  |  | 79 | 55
AC213722_1_543 | AC213722 | 171 | 79 | 4 |  |  |  | 65 | 53 | 7
AC157133_1_543 | AC157133 | 183 | 118 | 5 |  |  |  | 55 | 50 | 24
AC216977_2_543 | AC216977 | 216 | 109 | 2 |  |  |  | 64 | 48 | 19
AC232997_2_385 | AC232997 | 215 | 59 | 1 |  |  |  | 79 | 48 | 3
AC161642_2_469 | AC161642 | 197 | 75 | 2 |  |  |  | 64 | 47 | 15
AC213451_1_543 | AC213451 | 80 | 39 | 3 |  |  |  | 40 | 39
AC213711_2_358 | AC213711 | 115 | 72 | 1 |  |  |  | 37 | 33 | 20
AC231446_1_543 | AC231446 | 70 | 34 | 2 |  |  |  | 35 | 33 | 1
[NAME] | AC234092 | 65 | 19 | 1 |  |  |  | 24 | 19
AC177810_2_543 | AC177810 | 38 | 20 | 2 |  |  |  | 19 | 18 | 2
AC213707_1_543 | AC213707 | 30 | 13 | 3 |  |  |  | 15 | 13
AC164336_1_543 | AC164336 | 21 | 12 | 1 |  |  |  | 8 | 8 | 2
AC213443_1_543 | AC213443 | 12 | 6 | 1 |  |  |  | 6 | 6
AC231847_1_543 | AC231847 | 10 | 5 | 1 |  |  |  | 5 | 5
AC156136_1_407 | AC156136 | 33 | 9 | 1 |  |  |  | 6 | 4
AC169218_2_543 | AC169218 | 10 | 3 | 7 |  |  |  | 5 | 3 | 2
AC213721_1_543 | AC213721 | 6 | 3 | 3 |  |  |  | 3 | 3
AC233167_1_543 | AC233167 | 6 | 3 | 1 |  |  |  | 3 | 3
AC172950_1_543 | AC172950 | 9 | 4 | 1 |  |  |  | 4 | 2 | 2
AC213445_2_543 | AC213445 | 14 | 1 | 3 |  |  |  | 1 | 1
[NAME] | AC213447 | 2 | 1 | 3 |  |  |  | 1 | 1
AC213714_1_543 | AC213714 | 14 | 1 | 7 |  |  |  | 3 | 1
AC234573_1_543 | AC234573 | 2 | 1 | 1 |  |  |  | 1 | 1
AC157430_1_543 | AC157430 | 7 | 0 | 1 |  |  |  | 0 | 0
 | TOTAL