Spreadsheet: 13a3aed0-cefb-4ecd-9a40-305766c2ebcc
Sheet: Sheet1

SNP | Chromosome | Physical Position (hg18) | Risk Allele | Non-Jews | Unnamed: 5 | Unnamed: 6 | Ashkenazi Jews | Unnamed: 8 | Unnamed: 9 | effect in same direction? | AJ nominal (p<0.05)? | Noteworthy genes
 |  |  |  | [NAME] | OR | P-value | [NAME] | OR | P-value
rs2797685 | 1 | 7801650 | A | 0.19 | 1.05 (1.01-1.10) | 2.69×10-10 | 0.2185 | 1.30 (1.15-1.49) | 1.27x10-5 | yes | yes | [NAME]
rs11209026 | 1 | 67478546 | G | 0.932 | 2.66 (2.36-3.00) | 1.00x10-64 | 0.9217 | 2.20(2.10-2.35) | 9.42x10-9 | yes | yes | [NAME]
rs2476601 | 1 | 114179091 | G | 0.907 | 1.26 (1.17-1.37) | 4.47x10-9 | 0.94979 | 1.03 (0.81-1.36) | 0.857 | yes | no | [NAME]
rs3180018 | 1 | 153496755 | A | 0.25 | 1.13 (1.06-1.19)* | 1.29×10-9 | 0.2287 | 1.18 (1.04-1.35) | 6.10x10-3 | yes | yes | SCAMP3, [NAME]
rs4656940 | 1 | 159096892 | A | 0.801 | 1.15 (1.09-1.21) | 6.17x10-7 | failed qc | - | - | - | - | CD244, CD244, ITLN1
rs7517810 | 1 | 171120083 | T | 0.246 | 1.22 (1.16-1.28) | 1.51x10-15 | 0.269 | 1.13 (0.99-1.27) | 0.129 | yes | no | TNFSF18, TNFSF4, FASLG
rs1998598 | 1 | 195994265 | G | 0.302 | 1.04 (1.00-1.09) | 4.90×10-9 | failed qc | - | - | - | - | DENND1B
rs7554511 | 1 | 199144185 | C | 0.726 | 1.14 (1.08-1.19) | 1.58x10-7 | 0.7661 | 1.25 (1.14-1.38) | 7.53x10-2 | yes | no | C1orf106, [NAME]
rs3024505 | 1 | 205006527 | T | 0.157 | 1.12 (1.07-1.17) | 8.32×10-9 | 0.154 | 1.31 (1.14-1.54) | 5.57x10-4 | yes | yes | IL10, IL19
rs13428812 | 2 | 25345971 | G | 0.326 | 1.06 (1.03-1.10) | 1.41×10-8 | 0.3221 | 1.09(0.98-1.26) | 0.2681 | yes | no | DNMT3A
[NAME] | 2 | 27596107 | T | 0.418 | 1.15 (1.10-1.21) | 1.10x10-4 | 0.5284 | 1.04 (0.93-1.16) | 0.701 | yes | no | GCKR
rs10495903 | 2 | 43660422 | T | 0.129 | 1.14 (1.09-1.20)* | 7.70×10-8 | 0.1368 | 1.01 (0.90-1.25) | 8.03x10-2 | yes | no | THADA
rs10181042 | 2 | 61077763 | T | 0.42 | 1.14 (1.09-1.19) | 6.61x10-9 | 0.5081 | 1.09 (1.00-1.20) | 1.72x10-4 | no | yes | C2orf74, REL
rs2058660 | 2 | 102420881 | G | 0.231 | 1.19 (1.14-1.26) | 1.58x10-12 | failed qc | - | - | - | - | IL18RAP, IL12RL2, IL18R1, IL1RL1,
rs6738825 | 2 | 198605140 | A | 0.473 | 1.06 (1.02-1.11) | 1.82×10-7 | failed qc | - | - | - | - | PLCL1
rs7423615 | 2 | 230825118 | T | 0.187 | 1.12 (1.07-1.18) | 4.57×10-9 | 0.1766 | 1.10 (0.95-1.28) | 0.1419 | yes | no | SP140
rs3792109 | 2 | 233849156 | A | 0.529 | 1.34 (1.29-1.40) | 6.76x10-41 | failed qc | - | - | - | - | ATG16L1
rs13073817 | 3 | 18681862 | A | 0.322 | 1.08 (1.03-1.13) | 8.20×10-7 | failed qc | - | - | - | -
rs3197999 | 3 | 49696536 | A | 0.297 | 1.22 (1.16-1.27) | 6.17x10-17 | 0.4438 | 1.07 (0.99-1.23) | 3.06x10-2 | yes | yes | [NAME], GPX1, BSN
rs11742570 | 5 | 40446341 | C | 0.606 | 1.33 (1.27-1.39) | 7.08x10-36 | 0.6171 | 1.27 (1.18-1.37) | 2.88x10-4 | yes | yes | PTGER4
rs7702331 | 5 | 72586890 | A | 0.6 | 1.12 (1.07-1.17) | 2.00×10-6 | 0.6602 | 1.05 (0.94-1.16) | 0.206 | yes | no | TMEM174
rs2549794 | 5 | 96270305 | C | 0.409 | 1.05 (1.02-1.09) | 4.47×10-11 | 0.2791 | 1.11 (0.96-1.24) | 0.2113 | yes | no | ERAP2, LRAP
rs12521868 | 5 | 131812292 | T | 0.422 | 1.23 (1.18-1.28) | 1.41x10-20 | 0.3918 | 1.27 (1.13-1.43) | 6.14x10-4 | yes | yes | SLC22A4, SLC22A5, IRF1, [NAME], IL3
rs11167764 | 5 | 141459249 | C | 0.796 | 1.06 (1.02-1.11) | 1.10×10-9 | failed qc | - | - | - | - | NDFIP1
rs7714584 | 5 | 150250613 | G | 0.088 | 1.37 (1.28-1.47) | 7.76x10-19 | 0.1621 | 1.24 (1.05-1.40) | 8.72x10-4 | yes | yes | IRGM
rs6556412 | 5 | 158719963 | A | 0.332 | 1.18 (1.13-1.24) | 5.37x10-14 | failed qc | - | - | - | - | IL12B
rs359457 | 5 | 173212448 | T | 0.571 | 1.08 (1.04-1.12) | 5.25×10-8 | 0.5731 | 1.16 (1.06-1.26) | 1.407x10-2 | yes | yes | CPEB4
rs17309827 | 6 | 3378317 | T | 0.639 | 1.10 (1.05-1.16) | 6.16x10-7 | 0.6264 | 1.05 (0.94-1.15) | 0.1215 | yes | no | C6orf85
rs6908425 | 6 | 20836710 | C | 0.784 | 1.17 (1.11-1.23) | 1.41x10-8 | 0.7849 | 1.19 (1.08-1.31) | 4.41x10-3 | yes | yes | CDKAL1
rs1799964 | 6 | 31650287 | C | 0.209 | 1.19 (1.13-1.25) | 3.98x10-11 | 0.2185 | 1.05 (0.95-1.25) | 0.269 | yes | no | MCCD1, LTA, HLA-DQA2, TNF, LST1, LTB, LTA, NCR3
rs1847472 | 6 | 91029880 | G | 0.658 | 1.07 (1.03-1.11) | 3.63×10-6 | 0.6696 | 1.26 (1.16-1.37) | 2.513x10-3 | yes | yes | BACH2
rs6568421 | 6 | 106541718 | G | 0.301 | 1.13 (1.07-1.18)* | 4.37x10-8 | 0.3148 | 1.11 (0.99-1.27) | 3.62x10-2 | yes | yes | PRDM1
rs212388 | 6 | 159410424 | G | 0.393 | 1.10 (1.05-1.14) | 1.41×10-7 | 0.4282 | 1.06 (0.92-1.16) | 0.4432 | yes | no | TAGAP
rs415890 | 6 | 167326623 | C | 0.522 | 1.17 (1.12-1.22) | 2.51x10-12 | 0.4586 | 1.16 (1.03-1.30) | 2.30x10-2 | yes | yes | CCR6
rs1456896 | 7 | 50275007 | T | 0.69 | 1.14 (1.09-1.20) | 1.20x10-8 | 0.6941 | 1.17 (1.08-1.29) | 1.50x10-2 | yes | yes | IKZF1, ZPBP, [NAME]
rs4871611 | 8 | 126606752 | A | 0.609 | 1.17 (1.12-1.23) | 1.51x10-12 | 0.584 | 1.05 (0.90-1.12) | 4.20x10-2 | yes | yes
rs6651252 | 8 | 129636363 | T | 0.865 | 1.23 (1.17-1.30) | 2.29×10-6 | 0.8874 | 1.13 (0.99-1.31) | 0.147 | yes | no
rs10758669 | 9 | 4971602 | C | 0.349 | 1.18 (1.13-1.23) | 1.00x10-13 | 0.3772 | 1.11 (0.99-1.25) | 2.64x10-3 | yes | yes | JAK2
rs3810936 | 9 | 116592706 | C | 0.682 | 1.21 (1.15-1.27) | 1.00x10-15 | 0.718 | 1.06 (0.93-1.13) | 0.348 | yes | no | TNFSF15, TNFSF8
rs4077515 | 9 | 138386317 | T | 0.411 | 1.18 (1.13-1.22) | 4.37x10-19 | 0.3434 | 1.20 (1.05-1.33) | 3.30x10-3 | yes | yes | CARD9, SNAPC4
rs12722489 | 10 | 6142018 | C | 0.852 | 1.11 (1.05-1.16) | 8.51×10-6 | 0.8616 | 1.14 (1.01-1.31) | 0.2396 | yes | no | IL2RA
rs12242110 | 10 | 35575701 | G | 0.315 | 1.15 (1.10-1.20) | 1.10x10-09 | 0.398 | 1.07 (0.95-1.12) | 0.151 | yes | no | CREM
rs1819658 | 10 | 59583157 | C | 0.774 | 1.19 (1.13-1.25) | 1.41×10-7 | 0.2024 | 1.01 (0.87-1.18) | 0.211 | no | no | UBE2D1
rs10761659 | 10 | 64115570 | G | 0.538 | 1.23 (1.18-1.29) | 4.37x10-22 | 0.5382 | 1.24 (1.15-1.33) | 9.31x10-6 | yes | yes | ZNF365
rs1250550 | 10 | 80730323 | G | 0.669 | 1.19 (1.15-1.23) | 2.00x10-10 | failed qc | - | - | - | - | ZMIZ1
rs4409764 | 10 | 101274227 | T | 0.492 | 1.22 (1.17-1.27) | 2.29x10-20 | 0.5372 | 1.15 (1.06-1.25) | 8.61x10-4 | yes | yes | NKX2-3
rs102275 | 11 | 61314379 | C | 0.341 | 1.08 (1.04-1.12) | 7.24×10-8 | 0.3169 | 1.01 (0.95-1.17) | 0.531 | yes | no | FADS1
rs694739 | 11 | 63853809 | A | 0.626 | 1.10 (1.05-1.16) | 3.38x10-7 | failed qc | - | - | - | - | PRDX5, ESRRA
rs7927997 | 11 | 75979023 | T | 0.389 | 1.17 (1.12-1.22) | 5.62x10-13 | 0.4464 | 1.16 (1.04-1.31) | 5.55x10-3 | yes | yes | C11orf30
[NAME] | 12 | 39078567 | A | 0.025 | 1.74 (1.55-1.95) | 6.17x10-21 | 0.05671 | 1.49 (1.21-1.88) | 5.75x10-6 | yes | yes | MUC19, LRRK2
rs2062305 | 13 | 41950880 | G | 0.346 | 1.10 (1.05-1.15) | 2.00×10-6 | failed qc | - | - | - | - | TNFSF11, TNFSF11
rs3764147 | 13 | 43355925 | G | 0.245 | 1.17 (1.12-1.23) | 1.41x10-10 | 0.3861 | 1.13 (1.00-1.27) | 1.94x10-2 | yes | yes | C13orf3
rs4902642 | 14 | 68279952 | G | 0.584 | 1.07 (1.11-1.04)* | 2.00×10-7 | 0.3957 | 1.01 (0.91-1.15) | 0.6186 | no | no | ZFP36L1
rs8005161 | 14 | 87542348 | T | 0.119 | 1.23 (1.16-1.31)* | 1.29×10-8 | 0.05567 | 1.15 (0.92-1.46) | 0.333 | yes | no | GALC, GPR65
rs17293632 | 15 | 65229650 | T | 0.233 | 1.12 (1.07-1.16) | 1.41×10-13 | failed qc | - | - | - | - | SMAD3
rs151181 | 16 | 28398018 | G | 0.386 | 1.07 (1.03-1.12) | 1.10x10-10 | 0.295 | 1.15 (1.02-1.30) | 0.01669 | yes | yes | [NAME], IL27, SULT1A2, SULT1A1, SH2B1, [NAME], IL27, LAT, CD19, NFATC2IP
rs2076756 | 16 | 49314382 | G | 0.26 | 1.53 (1.46-1.60) | 3.98x10-69 | 0.2427 | 1.66(1.48-1.88) | 2.32x10-20 | yes | yes | [NAME]
rs3091315 | 17 | 29617778 | A | 0.723 | 1.20 (1.14-1.26) | 1.70x10-13 | failed qc | - | - | - | - | CCL2, CCL7
rs2872507 | 17 | 35294289 | A | 0.458 | 1.14 (1.09-1.19) | 1.51x10-9 | 0.4313 | 1.09 (0.98-1.23) | 0.3761 | yes | no | GSMDL, ZPBP2, ORMDL3, IKZF3
rs11871801 | 17 | 37824298 | A | 0.756 | 1.15 (1.10-1.21) | 2.51x10-8 | 0.8353 | 1.15 (1.02-1.31) | 0.122 | yes | no | MLX, STAT3
rs1893217 | 18 | 12799340 | G | 0.153 | 1.25 (1.18-1.32) | 1.29x10-14 | 0.09573 | 1.22 (1.01-1.46) | 9.40x10-2 | yes | no | PTPN2
rs740495 | 19 | 1075835 | G | 0.247 | 1.16 (1.10-1.21) | 8.13x10-12 | 0.3267 | 1.12 (1.00-1.27) | 1.02x10-2 | yes | yes | GPX4, SBNO2
rs12720356 | 19 | 10330975 | G | 0.084 | 1.12 (1.06-1.19)* | 9.20×10-10 | 0.09209 | 1.26 (1.04-1.50) | 2.698x10-2 | yes | yes | TYK2, ICAM1, ICAM3
rs736289 | 19 | 38448902 | T | 0.612 | 1.06 (1.02-1.11) | 2.69x10-7 | failed qc | - | - | - | -
rs281379 | 19 | 53906086 | A | 0.487 | 1.07 (1.04-1.11) | 8.60×10-10 | 0.4683 | 1.13 (1.00-1.26) | 0.01618 | yes | yes | FUT2,RASIP1
rs4809330 | 20 | 61820030 | G | 0.709 | 1.12 (1.06-1.18) | 2.51x10-12 | 0.7183 | 1.20 (1.10-1.32) | 1.466x10-2 | yes | yes | RTEL1, TNFRSF6B, SLC2A4RG
rs1736020 | 21 | 15734423 | C | 0.579 | 1.16 (1.11-1.21) | 9.33x10-12 | 0.6865 | 1.15 (1.02-1.24) | 6.58x10-3 | yes | yes
rs2838519 | 21 | 44439451 | G | 0.391 | 1.18 (1.13-1.23) | 2.09x10-14 | 0.4084 | 1.06 (0.96-1.20) | 0.171 | yes | no | ICOSLG
rs181359 | 22 | 20258641 | T | 0.203 | 1.10 (1.06-1.15) | 6.31×10-13 | 0.2263 | 1.14 (1.00-1.30) | 9.876x10-2 | yes | no | YDJC
rs713875 | 22 | 28922487 | C | 0.471 | 1.08 (1.04-1.13) | 5.70x10-9 | 0.4807 | 1.01 (0.87-1.09) | 0.9061 | yes | no | MTMR3
rs2413583 | 22 | 37989719 | C | 0.83 | 1.23 (1.17-1.29) | 1.70×10-10 | 0.8184 | 1.33 (1.24-1.46) | 1.65x10-4 | yes | yes | MAP3K7IP1