Spreadsheet: 00e6ad59-ff5f-431f-a364-5eca1b44e51f
Sheet: Sheet1

Table S11 - Ubiquitination | Unnamed: 1 | Unnamed: 2 | Unnamed: 3 | Unnamed: 4 | Unnamed: 5 | Unnamed: 6 | Unnamed: 7 | Unnamed: 8 | Unnamed: 9 | Unnamed: 10 | Control vs 16007 | Unnamed: 12 | Unnamed: 13 | Unnamed: 14 | Unnamed: 15 | Unnamed: 16 | Unnamed: 17 | Control vs PDK13 | Unnamed: 19 | Unnamed: 20 | Unnamed: 21 | Unnamed: 22 | Unnamed: 23 | Unnamed: 24
 |  |  |  |  |  |  |  |  |  |  | ln(fold change) |  |  |  | sqrt(JS) |  |  | ln(fold change) |  |  |  | sqrt(JS)
Hugo name | Microarray | DENV screen ([NAME]) | DENV screen (Dm) | YFV screen | WNV screen (Published) | WNV screen (Unpublished) | HCV-virus screen | HCV-replicon screen | DENV UTR-BP's | DENV-Y2H | Gene | Isoform | CDS | TSS | Splicing | Promoter | CDS | Gene | Isoform | CDS | TSS | Splicing | Promoter | CDS
AMFR |  |  |  |  |  |  |  |  |  |  | na | na | na | na | TSS32604:0.132505 | XLOC_033201:0.0642116 | na | na | [NAME], TCONS_00114309:1.92564, TCONS_00115153:1.71648 | na | TSS32605:1.79769e+308 | TSS32604:0.189332 | XLOC_033201:0.0688992 | na
ANAPC1 |  |  |  |  |  |  |  |  |  |  | na | TCONS_00172461:1.50074 | na | na | na | na | na | na | TCONS_00163914:2.29194, TCONS_00172461:2.67434 | na | na | na | na | na
ANAPC10 |  |  |  |  |  |  |  |  |  |  | na | TCONS_00235352:-1.79769e+308 | na | na | na | na | na | na | [NAME] | na | na | na | na | na
ANAPC11 | present |  |  |  |  |  |  |  |  |  | na | na | na | na | na | na | na | [NAME] | TCONS_00118256:-0.965501, TCONS_00118259:-1.04476, TCONS_00118260:-0.891476 | na | na | na | na | na
ANAPC2 |  |  |  |  |  |  |  |  |  |  | na | na | na | na | na | na | na | XLOC_096316:-0.42223 | na | na | na | na | na | na
[NAME] |  |  |  |  |  |  |  |  |  |  | na | na | na | na | na | na | na | XLOC_068835:-0.625461, XLOC_072169:-2.24277 | TCONS_00236609:-2.24277 | na | na | na | na | na
ANAPC5 |  |  |  |  |  |  |  |  |  |  | na | na | na | na | na | na | na | XLOC_020200:-0.547557 | [NAME], TCONS_00066756:-1.55151 | na | na | na | na | na
BAG1 | present |  |  |  |  |  |  |  |  |  | na | na | na | na | na | na | na | na | na | na | na | na | na | na
BAP1 |  |  |  |  |  |  |  |  |  |  | na | na | na | na | na | na | na | na | TCONS_00212258:-0.786449 | na | na | na | na | na
BIRC2 |  |  |  |  |  |  |  |  |  |  | na | TCONS_00060018:1.79769e+308 | na | tss_group_exp.diff | TSS17240:0.14296 | XLOC_014293:0.314069 | na | XLOC_014293:1.20488 | TCONS_00053652:-1.79769e+308, TCONS_00057627:2.95475, TCONS_00060018:1.79769e+308 | na | TSS17237:1.79769e+308, TSS17239:1.68849, TSS17243:1.79769e+308, TSS17244:2.95475 | TSS17242:0.832555 | XLOC_014293:0.430603 | na
BIRC3 | present |  |  |  |  |  |  |  |  |  | XLOC_014292:2.25426 | na | P9637:2.25426 | TSS17235:2.25426 | na | na | na | XLOC_014292:4.58782, XLOC_017983:3.37523 | TCONS_00048938:4.05408, TCONS_00048939:5.40755, TCONS_00060726:3.37523 | P9637:4.58782 | TSS17235:4.58782 | na | na | na
BRCA1 |  |  |  |  |  |  |  |  |  |  | na | na | na | na | na | na | na | na | na | na | na | na | na | na
BTRC |  |  |  |  |  |  |  |  |  |  | na | TCONS_00035989:-1.61767, TCONS_00042660:3.62012 | na | na | na | na | na | na | TCONS_00042660:4.36441 | na | na | na | na | na
CBL |  | present |  |  |  |  |  |  |  |  | na | na | na | na | na | na | na | na | TCONS_00049223:1.04885 | na | na | na | na | na
CDC20 | present |  |  |  |  |  |  |  |  |  | na | TCONS_00002417:-0.901571 | na | na | TSS1611:0.252132 | XLOC_000669:0.0277896 | na | na | TCONS_00002417:-1.46165 | na | na | TSS1611:0.355432, TSS1612:0.0993648 | XLOC_000669:0.0367882 | na
CDC23 |  |  |  |  |  | present |  |  |  |  | na | na | na | na | na | na | na | na | na | na | na | na | na | na
CDC34 | present |  |  |  |  |  |  |  |  |  | na | na | na | na | na | na | na | na | na | na | na | na | na | na
CUL1 |  |  |  |  |  |  |  |  |  |  | na | na | na | na | na | na | na | na | TCONS_00283221:-1.93646 | na | na | na | na | na
CUL2 |  |  |  |  |  |  |  |  |  |  | na | na | na | na | na | na | na | na | na | na | na | na | na | na
DNAJA1 | present |  |  |  |  |  |  |  |  |  | na | TCONS_00316886:-1.79769e+308, TCONS_00318285:-0.826873 | na | na | na | na | na | XLOC_094117:-0.684331 | TCONS_00316886:-3.47842, TCONS_00318285:-1.02351, TCONS_00139556:-0.764818, TCONS_00139557:1.59449 | na | TSS41674:-0.764818, TSS41675:1.59449 | na | XLOC_043478:0.185283 | na
[NAME] | present |  |  |  |  |  | present |  |  |  | na | na | na | na | na | XLOC_043478:0.0679872 | na | na | na | na | na | na | na | na
DNAJB11 | present | present |  |  |  |  |  |  |  |  | na | TCONS_00209753:1.99011 | na | na | na | na | na | XLOC_063391:1.01428 | TCONS_00209750:1.11082, TCONS_00209752:1.31406, TCONS_00218329:-1.09235, TCONS_00220837:1.46586 | na | na | na | na | na
DNAJB12 |  |  |  |  |  |  |  |  |  |  | na | na | na | na | na | na | na | na | na | na | na | na | na | na
DNAJB13 |  |  |  |  |  |  |  |  |  |  | na | na | na | na | na | na | na | na | na | na | na | na | na | na
[NAME] |  |  |  |  |  |  |  |  |  |  | na | na | na | na | na | na | na | na | TCONS_00234479:2.4335, TCONS_00243571:2.05277 | na | na | na | na | na
[NAME] |  |  |  |  |  |  |  |  |  |  | na | na | na | na | na | na | na | XLOC_048990:0.937337 | TCONS_00159508:3.70306, TCONS_00159517:1.48044, TCONS_00159520:1.37421 | na | na | na | na | na
DNAJB3 |  |  |  |  |  |  |  |  |  |  | na | na | na | na | na | na | na | na | na | na | na | na | na | na
DNAJB4 |  |  |  |  |  |  |  |  |  |  | na | na | na | na | na | na | na | na | TCONS_00003580:-1.87458 | na | na | na | na | na
DNAJB5 |  |  |  |  |  |  |  |  |  |  | na | TCONS_00322760:2.51833 | na | na | na | na | na | XLOC_094164:1.39881, XLOC_096721:1.25601 | TCONS_00309836:1.39479, TCONS_00309837:1.56384, TCONS_00318809:1.25523, TCONS_00322760:2.45028 | na | na | na | na | na
DNAJB6 | present |  |  |  |  |  |  |  |  |  | na | na | na | na | na | na | na | na | TCONS_00283662:-1.47793 | na | na | na | na | na
DNAJB7 |  |  |  |  |  |  |  |  |  |  | na | na | na | na | na | na | na | na | na | na | na | na | na | na
DNAJB8 |  | present |  |  |  | present |  |  |  |  | na | na | na | na | TSS64828:0.336856 | na | na | na | na | na | na | na | na | na
DNAJB9 |  |  |  |  |  |  |  |  |  |  | na | na | na | na | na | na | na | XLOC_085312:1.59198, XLOC_089343:1.52929 | TCONS_00282044:1.58093, TCONS_00289324:2.20825, TCONS_00294624:1.52987 | na | na | na | na | na
DNAJC1 | present |  |  |  |  |  |  |  |  |  | na | na | na | na | na | na | na | XLOC_010746:0.583424 | TCONS_00042248:2.8599, TCONS_00043685:-1.79769e+308, TCONS_00045870:1.08725 | na | na | na | na | na
DNAJC10 |  |  |  |  |  |  |  |  |  |  | na | TCONS_00158172:-2.3742 | na | na | TSS46294:0.383492, TSS46295:0.0937459 | XLOC_048675:0.0678928 | na | XLOC_048675:0.998547 | TCONS_00158173:1.65987, TCONS_00158174:1.36306, TCONS_00158175:2.72301, TCONS_00158176:3.0066, TCONS_00158177:1.79769e+308, TCONS_00169337:1.46304, TCONS_00177374:2.1334, TCONS_00178562:1.2578 | na | TSS46294:0.867969, TSS46295:2.79007, TSS46296:1.79769e+308, TSS46297:2.1334 | TSS46294:0.251077 | XLOC_048675:0.168218 | na
DNAJC11 |  |  |  |  |  |  |  |  |  |  | na | na | na | na | na | na | na | na | na | na | na | na | na | na
DNAJC12 |  |  |  |  |  |  |  |  |  |  | na | na | na | na | na | na | na | XLOC_011091:1.8544 | TCONS_00038347:1.78413 | na | na | na | na | na
DNAJC13 |  |  |  |  |  |  |  |  |  |  | na | TCONS_00208024:-0.135112 | na | TSS61201:-0.135112 | TSS61199:0.0959225 | XLOC_062968:0.0817375 | na | XLOC_062968:0.548609 | TCONS_00208021:1.88128, TCONS_00208024:-0.141551, TCONS_00225435:0.909525 | na | TSS61201:-0.141551 | [NAME] | XLOC_062968:0.0689421 | na
[NAME] |  |  |  |  |  |  |  |  |  |  | na | na | na | na | na | na | na | na | na | na | na | na | na | na
DNAJC15 | present |  |  |  |  |  |  |  |  |  | na | na | na | na | na | na | na | na | na | na | na | na | na | na
[NAME] |  |  |  |  |  |  |  |  |  |  | na | TCONS_00000932:1.80892 | na | na | na | na | na | na | TCONS_00000932:1.89477, TCONS_00021828:2.93864 | na | na | na | na | na
DNAJC17 |  |  |  |  |  |  |  |  |  |  | na | na | na | na | na | na | na | na | na | na | na | na | na | na
DNAJC18 |  |  |  |  |  |  |  |  |  |  | na | TCONS_00252039:-1.79769e+308 | na | na | TSS75730:0.0924008, TSS75735:0.152249 | XLOC_076219:0.165346 | na | na | TCONS_00252028:-0.753869, TCONS_00252030:1.79769e+308, TCONS_00252037:1.69253, TCONS_00252039:-1.79769e+308 | na | TSS75729:-0.753869, TSS75731:1.79769e+308, TSS75735:1.62734 | TSS75735:0.149622 | XLOC_076219:0.19276 | na
[NAME] |  |  |  |  |  |  |  |  |  |  | na | na | na | na | na | na | na | na | TCONS_00215335:-1.80268 | na | na | na | na | na
DNAJC2 |  |  |  |  |  |  |  |  |  |  | na | na | na | na | na | na | na | na | na | na | na | na | na | na
DNAJC21 | present |  |  |  |  |  |  |  |  |  | na | na | na | na | TSS71509:0.061674 | XLOC_073987:0.0838985 | na | na | TCONS_00245175:1.14216, [NAME] | na | TSS71508:1.757 | TSS71509:0.29795 | XLOC_073987:0.136418 | na
DNAJC22 |  |  |  |  |  |  |  |  |  |  | na | [NAME] | na | na | na | na | na | na | na | na | na | na | na | na
DNAJC24 |  |  |  |  |  |  |  |  |  |  | na | na | na | na | na | na | na | na | na | na | na | na | na | na
DNAJC25 |  |  |  |  |  |  |  |  |  |  | na | na | na | na | na | na | na | na | TCONS_00311241:1.08925 | na | na | na | na | na
DNAJC27 |  |  |  |  |  |  |  |  |  |  | na | na | na | na | na | na | na | XLOC_049394:1.50744 | TCONS_00161216:2.16049, TCONS_00174477:1.95671, TCONS_00177481:1.79769e+308 | na | na | na | na | na
DNAJC28 | present |  |  |  |  |  |  |  |  |  | na | na | na | na | na | na | na | na | na | na | na | TSS55605:0.14533 | na | na
[NAME] | present |  |  |  |  |  |  |  |  |  | XLOC_024185:1.03528 | TCONS_00082546:2.20673 | na | na | na | na | na | XLOC_023558:1.27027, XLOC_024185:1.7205 | TCONS_00078272:1.75299, TCONS_00080893:1.32827, TCONS_00082546:2.7719, TCONS_00083449:1.12394 | na | na | na | na | na
DNAJC30 |  |  |  |  |  |  |  |  |  |  | na | na | na | na | na | na | na | na | na | na | na | na | na | na
DNAJC4 |  |  |  |  |  |  |  |  |  |  | na | na | na | na | na | na | na | na | na | na | na | na | na | na
DNAJC5 |  |  |  |  |  |  |  |  |  |  | na | TCONS_00182543:3.53196 | na | na | na | na | na | na | TCONS_00182543:1.9119, TCONS_00187135:-2.03261 | na | na | na | na | na
DNAJC5B |  |  |  |  |  |  |  |  |  |  | na | na | na | na | na | na | na | na | na | na | na | na | na | na
DNAJC5G |  |  |  |  |  |  |  |  |  |  | na | na | na | na | na | na | na | na | TCONS_00153882:1.79769e+308 | na | TSS43646:1.79769e+308 | na | na | na
DNAJC6 |  |  |  |  |  |  |  |  |  |  | na | TCONS_00003281:-3.27219, TCONS_00003283:1.72328, TCONS_00019247:-1.73911 | na | na | na | na | na | na | TCONS_00003281:-3.07884, TCONS_00003283:1.44082 | na | na | na | na | na
DNAJC7 | present |  |  |  |  |  |  |  |  |  | na | na | na | na | na | na | na | na | na | na | na | na | na | na
DNAJC8 |  |  |  |  |  |  |  |  |  |  | na | na | na | na | na | na | na | XLOC_000465:2.22041 | TCONS_00010482:-1.29245, TCONS_00019082:3.5792, TCONS_00026098:-1.16344, TCONS_00028277:-1.79769e+308, TCONS_00032989:1.79555 | na | na | na | na | na
DNAJC9 | present |  |  |  |  |  |  |  |  |  | na | na | na | na | na | na | na | na | na | na | na | na | na | na
DTX3L | present |  |  |  |  |  |  | present |  |  | na | TCONS_00207581:-2.00426 | na | na | na | na | na | na | na | na | na | na | na | na
[NAME] |  |  |  |  |  |  |  |  |  |  | na | TCONS_00237928:-3.08827, TCONS_00239151:-1.79769e+308, TCONS_00240966:2.80468, TCONS_00243614:-2.9457 | na | na | na | na | na | XLOC_071025:0.758683 | [NAME], TCONS_00239151:-1.79769e+308, [NAME] | na | na | na | na | na
FZR1 |  |  |  |  |  |  |  |  |  |  | na | na | na | na | na | na | na | na | na | na | na | na | na | na
HERC5 | present |  |  |  |  |  |  |  |  |  | XLOC_069308:1.49104 | TCONS_00230405:3.8648, TCONS_00241885:2.49328 | na | na | na | na | na | XLOC_069308:2.41606, XLOC_072959:3.02471 | TCONS_00230402:1.89167, TCONS_00230405:4.71168, TCONS_00241885:3.58878, TCONS_00243149:3.02471, TCONS_00243416:2.06311 | na | na | na | na | na
HERC6 | present |  |  |  |  |  |  |  |  |  | na | TCONS_00230395:-2.91465, TCONS_00230399:0.988266, TCONS_00230401:1.79769e+308 | na | TSS67630:0.988266, TSS67632:1.79769e+308 | TSS67628:0.676236 | na | na | na | TCONS_00230393:1.79769e+308, TCONS_00230399:-1.79769e+308, TCONS_00230401:1.79769e+308 | na | TSS67628:1.29225, TSS67630:-1.79769e+308, TSS67632:1.79769e+308 | TSS67628:0.697443 | na | na
HSP90AA1 |  |  |  |  |  |  |  |  |  |  | na | na | na | na | na | na | na | na | na | na | na | na | na | na
HSP90AB1 |  |  |  |  |  |  |  |  |  |  | na | TCONS_00270662:2.96748, TCONS_00272708:-0.920646, TCONS_00274180:3.18944, TCONS_00276215:-0.892479 | na | TSS77686:-0.892479, TSS77687:2.96748 | TSS77684:0.0904832, TSS77688:0.212685 | XLOC_079522:0.131736 | na | XLOC_079522:-0.450192 | TCONS_00272709:-2.54801, TCONS_00274180:4.38104, TCONS_00275407:-1.79769e+308, TCONS_00276215:-1.48757 | na | TSS77686:-1.48757, TSS77689:-1.79769e+308 | TSS77684:0.0617851, TSS77688:0.370154 | XLOC_079522:0.18041 | na
HSP90B1 | present |  |  |  |  |  |  |  |  |  | XLOC_019053:0.555425, [NAME] | TCONS_00064194:4.93701, [NAME], TCONS_00070772:1.22185, TCONS_00076710:1.79769e+308 | na | na | na | na | na | XLOC_019053:1.14633, XLOC_022186:2.28283 | TCONS_00064193:1.13896, TCONS_00064194:-1.79769e+308, TCONS_00064196:1.63829, TCONS_00069965:-1.79769e+308, TCONS_00070408:2.28283, TCONS_00070772:2.33168, TCONS_00070773:-1.01595, TCONS_00073672:1.0788, TCONS_00074668:-2.7705, TCONS_00075663:1.86883, TCONS_00076710:1.79769e+308 | na | na | na | na | na
HSPA12A |  |  |  |  |  |  |  |  |  |  | na | na | na | na | na | XLOC_011559:0.583719 | na | XLOC_011559:3.00483 | TCONS_00039768:1.79769e+308, TCONS_00039769:1.79769e+308, TCONS_00039770:1.79769e+308 | na | TSS15349:1.79769e+308, TSS15350:1.79769e+308, TSS15351:1.79769e+308 | na | XLOC_011559:0.547328 | na
HSPA12B |  |  |  |  |  |  |  |  |  |  | na | na | na | na | na | na | na | XLOC_055112:-1.98335 | TCONS_00186977:-2.88224 | na | TSS52086:-1.68131, TSS52087:-2.88224 | na | na | na
HSPA13 |  |  |  |  |  |  |  |  |  |  | na | na | na | na | na | na | na | XLOC_058252:0.953534 | TCONS_00192371:0.890578, TCONS_00193889:1.77992 | na | TSS55389:1.77992, TSS55390:0.893164, TSS55391:0.890578 | na | XLOC_058252:0.0695233 | na
HSPA14 |  |  |  |  |  |  |  |  |  |  | na | na | na | na | na | na | na | XLOC_009521:0.525434 | TCONS_00040911:0.9541 | na | na | na | na | na
HSPA1A/HSPA1B |  |  |  |  |  |  |  |  |  |  | na | TCONS_00262530:-2.44508 | P48262:-2.44508 | na | na | na | XLOC_079320:0.0720378 | [NAME] | TCONS_00262530:-2.36374, TCONS_00262531:-1.24932 | P48262:-2.36374, P48263:-1.24932 | na | na | na | XLOC_079320:0.0505801
HSPA1L | present |  |  |  |  |  |  |  |  |  | na | na | na | na | na | na | na | XLOC_080760:-1.42848 | TCONS_00266458:-1.46139 | P49884:-1.46139 | na | na | na | na
HSPA2 |  |  |  |  |  |  |  |  |  |  | na | na | na | na | na | na | na | XLOC_025916:-1.20261 | TCONS_00085204:-1.20261 | na | na | na | na | na
HSPA4 | present |  |  |  |  |  |  |  |  |  | na | TCONS_00247500:-1.79769e+308 | na | na | na | na | na | na | TCONS_00247500:-1.79769e+308 | na | na | na | na | na
HSPA4L |  |  |  |  |  |  |  |  |  |  | na | na | na | na | na | na | na | na | na | na | na | na | na | na
HSPA5 |  | present |  |  |  |  |  |  |  |  | XLOC_096118:0.700305 | TCONS_00315123:1.10049, TCONS_00320464:0.809446, TCONS_00323888:1.33563 | na | na | na | na | na | XLOC_096118:1.57577 | TCONS_00315123:1.52401, TCONS_00319264:1.84024, TCONS_00320464:1.48605, TCONS_00320465:1.34624, TCONS_00323888:2.73554 | na | na | na | na | na
HSPA6 | present |  |  |  |  |  |  |  |  |  | na | na | na | na | na | na | na | na | na | na | na | na | na | na
HSPA7 |  |  |  |  |  |  |  |  |  |  | XLOC_001822:2.84589 | TCONS_00006333:2.84589 | na | na | na | na | na | XLOC_001822:1.82701 | TCONS_00006333:1.82701 | na | na | na | na | na
HSPA8 |  |  |  |  |  |  |  |  |  |  | XLOC_015571:-0.721017 | TCONS_00051853:-0.586406, TCONS_00051855:-5.84877, TCONS_00057882:-0.92143 | na | na | na | na | na | XLOC_015571:-1.77378 | TCONS_00051853:-1.63474, TCONS_00051855:-1.79769e+308, TCONS_00056346:-1.60118, [NAME] | na | na | na | na | na
HSPA9 | present |  |  |  |  |  |  |  |  |  | na | na | na | na | na | na | na | na | TCONS_00251973:1.78851, TCONS_00251977:1.62684 | na | na | na | na | na
HSPB1 | present |  |  |  |  |  |  |  | present |  | XLOC_085033:-0.499647 | TCONS_00280751:-2.69748 | na | TSS83162:-1.98812 | TSS83162:0.346428 | XLOC_085033:0.137779 | na | XLOC_085033:-1.07619 | TCONS_00280751:-2.16639, TCONS_00280753:-0.971398, TCONS_00280754:-0.883833, TCONS_00297934:-1.12103 | na | TSS83162:-1.75007, TSS83163:-0.883833, TSS83164:-1.12103, TSS83165:-0.971398 | TSS83162:0.247152 | XLOC_085033:0.084372 | na
HSPB11 | present |  |  |  |  |  |  |  |  |  | na | na | na | na | na | na | na | na | na | na | na | na | na | na
HSPB2 |  |  |  |  |  |  |  |  |  |  | na | na | na | na | na | na | na | na | na | na | na | na | na | na
[NAME] |  |  |  |  |  |  |  |  |  |  | na | na | na | na | na | na | na | na | na | na | na | na | na | na
HSPB6 |  |  |  |  |  |  |  |  |  |  | na | na | na | na | na | na | na | na | na | na | na | na | na | na
HSPB7 |  | present |  |  |  |  |  |  |  |  | na | na | na | na | na | na | na | na | na | na | na | na | na | na
HSPB8 |  |  |  |  |  |  |  |  |  |  | na | na | na | na | na | na | na | XLOC_019159:0.885741 | TCONS_00064497:1.61971 | na | na | na | na | na
HSPB9 |  |  |  | present |  |  |  |  |  |  | na | na | na | na | na | na | na | na | na | na | na | na | na | na
HSPD1 | present |  |  |  |  |  |  |  |  |  | na | na | na | na | na | na | na | na | TCONS_00165784:1.79769e+308, TCONS_00171613:-4.9861, TCONS_00172584:1.86316, TCONS_00177661:-1.25423 | na | na | na | na | na
HSPE1 | present |  |  |  |  |  |  |  |  |  | na | na | na | na | na | na | na | XLOC_048766:-1.70787 | [NAME], [NAME] | na | na | na | na | na
HSPH1 |  |  |  |  |  |  |  |  |  |  | na | TCONS_00079023:-1.93233 | na | na | na | na | na | na | TCONS_00079023:-4.76657, TCONS_00079027:1.43394 | na | na | na | na | na
MDM2 |  |  |  |  |  |  |  |  |  |  | na | TCONS_00063842:-2.57735 | na | na | na | na | na | XLOC_018880:0.761554 | TCONS_00063826:1.05988, TCONS_00063827:-1.79769e+308, TCONS_00063829:-1.79769e+308, TCONS_00063835:-1.79769e+308, TCONS_00063844:1.93585, TCONS_00063846:1.51412 | na | na | na | na | na
MED20 |  |  |  |  |  |  |  |  |  |  | na | na | na | na | na | na | na | na | na | na | na | na | na | na
NEDD4 |  |  |  |  |  |  |  |  |  |  | na | TCONS_00095758:2.78234 | na | na | na | na | na | XLOC_029794:0.936551 | TCONS_00098662:1.90135, TCONS_00098663:1.15706 | na | na | na | na | na
NEDD4L |  |  |  |  |  |  |  |  |  |  | na | TCONS_00131588:1.58621, TCONS_00134727:2.13676, TCONS_00135755:1.9212 | na | na | na | na | na | XLOC_040627:1.32942, XLOC_041947:2.06198, XLOC_041948:-1.25461 | TCONS_00131580:-1.79769e+308, TCONS_00131586:1.91579, TCONS_00132979:1.74164, TCONS_00133788:1.79769e+308, TCONS_00134297:1.06488, TCONS_00134726:-2.32276, TCONS_00134727:5.15333, TCONS_00134988:2.06198, TCONS_00135108:1.66397, TCONS_00135109:1.39213, TCONS_00135755:3.08126 | na | na | na | na | na
[NAME] |  |  |  |  |  |  |  |  |  |  | na | TCONS_00065906:-1.69884, TCONS_00070155:-1.30498, TCONS_00073838:1.35474 | na | na | na | na | na | na | TCONS_00065906:-1.83534, TCONS_00065907:1.90346, TCONS_00073837:2.05562, TCONS_00073838:1.14255 | na | na | na | na | na
PARK2 |  |  |  |  |  |  |  |  |  |  | na | na | na | na | na | na | na | na | na | na | na | na | na | na
PSMA1 |  |  |  |  |  |  |  |  |  |  | na | na | na | na | na | na | na | na | na | na | na | na | na | na
PSMA2 | present |  |  |  |  |  |  |  |  |  | na | na | na | na | na | XLOC_086141:0.0919181 | na | na | na | na | na | TSS85784:0.0710758 | XLOC_086141:0.146377 | na
PSMA3 | present |  |  |  |  |  |  |  |  |  | na | TCONS_00093191:1.79769e+308 | na | na | na | na | na | na | TCONS_00093190:-1.88106, TCONS_00093191:1.79769e+308 | na | na | na | na | na
PSMA4 | present |  |  |  |  |  |  |  |  |  | na | na | na | na | TSS28491:0.0984582 | XLOC_029321:0.0211348 | na | na | na | na | na | TSS28491:0.1008 | XLOC_029321:0.0441712 | na
PSMA5 | present |  |  |  |  |  |  |  |  |  | na | na | na | na | TSS8413:0.0870298, TSS8414:0.08066 | XLOC_003894:0.0187481 | na | na | TCONS_00012941:1.77189 | na | [NAME] | TSS8414:0.150881 | XLOC_003894:0.0374612 | na
PSMA6 | present |  |  |  |  |  |  |  |  |  | na | na | na | na | na | na | na | na | na | na | na | na | na | na
PSMA7 | present |  |  |  |  |  |  |  |  |  | na | na | na | na | TSS54512:0.00928447 | XLOC_056338:0.0151866 | na | na | na | na | na | TSS54512:0.0363804 | XLOC_056338:0.0158075 | na
PSMB1 | present |  |  |  |  |  |  |  |  |  | na | na | na | na | TSS81751:0.0171819 | XLOC_081889:0.0115748 | na | na | na | na | na | TSS81751:0.0202829 | XLOC_081889:0.0339914 | na
PSMB10 | present |  |  |  |  |  |  |  |  |  | na | na | na | na | na | na | na | na | na | na | na | na | na | na
PSMB2 | present |  |  |  |  |  |  |  |  |  | na | na | na | na | na | na | na | XLOC_003226:-0.699538 | TCONS_00010880:-0.90501 | na | na | na | na | na
PSMB3 | present |  |  |  |  |  |  |  |  |  | na | na | na | na | na | na | na | na | na | na | na | na | na | na
PSMB4 |  |  |  |  |  |  |  |  |  |  | na | na | na | na | TSS3448:0.0513441 | XLOC_001589:0.0935152 | na | XLOC_001589:-0.636399 | TCONS_00005381:-1.59793, TCONS_00005385:-1.56149 | na | TSS3448:-1.30421, TSS3451:-1.56149 | TSS3448:0.184518 | XLOC_001589:0.138255 | na
PSMB5 | present |  |  |  |  |  |  |  |  |  | na | na | na | na | na | na | na | XLOC_026389:-0.596046 | na | na | na | na | na | na
PSMB6 | present | present |  |  |  |  |  |  |  |  | na | TCONS_00128502:3.96592 | na | na | TSS33277:0.0562229, TSS33278:0.0210516, TSS33279:0.653769 | XLOC_035686:0.0828883 | na | na | TCONS_00124609:-0.882947, TCONS_00124610:-3.38504, TCONS_00128502:3.00988 | na | TSS33277:-0.631335 | TSS33277:0.0649471, TSS33278:0.0101503, TSS33279:0.726209 | XLOC_035686:0.035015 | na
PSMB7 | present |  |  |  |  |  |  |  |  |  | na | na | na | na | na | na | na | na | na | na | na | na | na | na
PSMB8 | present |  |  |  |  |  |  |  |  |  | na | na | na | na | na | na | na | na | na | na | na | na | na | na
PSMB9 | present |  |  |  |  |  |  |  |  |  | na | TCONS_00262729:-1.79769e+308 | na | na | na | na | na | na | TCONS_00262729:-1.79769e+308 | na | na | na | na | na
[NAME] |  |  |  |  |  |  |  |  |  |  | na | na | na | na | na | na | na | na | TCONS_00090640:2.25169 | na | na | na | na | na
PSMC2 | present |  |  |  |  |  |  |  |  |  | na | na | na | na | na | na | na | na | na | na | na | na | na | na
PSMC3 | present |  |  |  |  |  |  |  |  |  | na | TCONS_00053831:1.71631, TCONS_00057761:-1.04988 | na | na | TSS18336:0.387073 | XLOC_014924:0.105458 | na | na | TCONS_00050380:-0.970161, TCONS_00053831:2.00512, TCONS_00057761:-1.37968, TCONS_00060133:2.08654 | na | TSS18335:-0.970161 | [NAME] | XLOC_014924:0.233353 | na
PSMC4 | present | present |  |  |  |  |  |  |  |  | na | TCONS_00150256:1.44523 | na | TSS40027:1.44523 | TSS40026:0.0588766 | XLOC_042708:0.131238 | na | na | na | na | na | TSS40026:0.0524345 | XLOC_042708:0.0354779 | na
PSMC5 | present |  |  |  |  |  |  |  |  |  | na | TCONS_00117803:1.68685 | P20619:1.68685 | TSS34852:1.68685 | na | XLOC_036458:0.0963371 | XLOC_036458:0.0963371 | na | TCONS_00117803:-2.07699 | P20619:-2.07699 | TSS34852:-2.07699 | na | XLOC_036458:0.0321745 | XLOC_036458:0.0321745
PSMC6 | present |  |  | present |  |  |  |  |  |  | na | na | na | na | na | na | na | na | na | na | na | na | na | na
PSMD1 | present |  |  |  |  |  |  | present |  | present | na | TCONS_00159838:-4.63132, TCONS_00159845:1.56671 | na | na | na | na | na | na | TCONS_00159836:-3.38717, [NAME], TCONS_00159845:2.01372, TCONS_00172306:-1.46268, TCONS_00176179:1.76071 | na | na | na | na | na
PSMD10 |  |  |  |  |  |  |  |  |  |  | na | na | na | na | na | na | na | na | na | na | na | na | na | na
PSMD11 | present |  |  |  |  |  |  |  |  |  | na | na | na | na | na | na | na | na | na | na | na | na | na | na
PSMD12 |  |  |  |  |  |  |  |  |  |  | na | na | na | na | TSS37166:0.154353 | na | na | na | TCONS_00123037:-1.68976 | na | na | TSS37166:0.174601 | na | na
[NAME] | present |  |  |  |  |  |  |  |  |  | na | na | na | na | na | na | na | na | na | na | na | na | na | na
PSMD14 | present |  |  | present |  |  |  |  |  |  | na | TCONS_00157580:1.77716, TCONS_00172177:1.79769e+308 | na | na | na | na | na | na | TCONS_00157580:2.12249, TCONS_00169280:2.02715, TCONS_00172177:1.79769e+308, TCONS_00178534:2.47431 | na | na | na | na | na
PSMD2 | present | present |  |  |  |  |  |  |  |  | na | na | na | na | na | na | na | na | na | na | na | na | na | na
[NAME] | present |  |  |  |  |  |  | present |  |  | na | TCONS_00122522:2.82616, TCONS_00124793:-1.34767, TCONS_00126195:1.15735, TCONS_00130550:-3.20569 | na | TSS34147:-0.595263 | [NAME], TSS34147:0.345987 | XLOC_036139:0.151202 | na | XLOC_036139:-0.462848 | TCONS_00122523:-1.64347, TCONS_00122522:3.11363, TCONS_00124793:-2.21266, TCONS_00130549:-0.8406, TCONS_00130550:-2.97521 | na | TSS34147:-1.17169, TSS34148:-1.64347 | TSS34145:0.234055, TSS34147:0.354859 | XLOC_036139:0.288333 | na
PSMD4 | present |  |  |  |  |  |  |  |  |  | na | TCONS_00025845:2.86628 | na | TSS3432:2.86628 | TSS3433:0.0653724 | XLOC_001585:0.186808 | na | na | TCONS_00025845:2.58784 | na | TSS3432:2.58784 | TSS3433:0.08581 | XLOC_001585:0.179003 | na
PSMD5 |  |  |  |  |  |  |  |  |  |  | na | TCONS_00314947:1.79769e+308 | na | na | na | na | na | na | TCONS_00314947:1.79769e+308 | na | na | na | na | na
PSMD6 |  |  |  |  |  |  |  |  |  |  | na | TCONS_00220992:-3.78152 | na | na | na | na | na | na | TCONS_00212668:-1.97486, TCONS_00212671:-1.5263, TCONS_00220992:-2.78235 | na | na | na | na | na
[NAME] |  | present |  |  |  |  |  |  |  |  | na | na | na | na | na | na | na | na | na | na | na | na | na | na
[NAME] | present |  |  |  |  |  |  |  |  |  | na | na | na | na | TSS39948:0.0815478 | na | na | na | na | na | na | TSS39948:0.103083 | na | na
PSMD9 |  |  |  |  |  |  |  |  |  |  | na | na | na | na | na | na | na | na | na | na | na | na | na | na
[NAME] |  |  |  |  |  |  | present |  |  |  | na | na | na | na | TSS25545:0.0221601 | na | na | na | na | na | na | TSS25545:0.0491803 | XLOC_025699:0.0182093 | na
PSME2 | present | present |  |  |  |  |  |  |  |  | na | TCONS_00086348:-1.84883 | na | na | na | na | na | na | TCONS_00086346:-1.79769e+308 | na | na | na | na | na
[NAME] |  |  |  |  |  |  |  |  |  |  | na | na | na | na | na | na | na | na | na | na | na | na | na | na
RNF213 | present |  |  |  |  |  |  |  |  |  | na | na | na | na | na | na | na | na | na | na | na | na | na | na
SKP1 |  |  |  | present |  |  |  |  |  |  | na | na | na | na | na | na | na | na | TCONS_00251757:-3.61647 | na | na | na | na | na
SKP1P2 |  |  |  |  |  |  |  |  |  |  | na | na | na | na | na | na | na | na | na | na | na | na | na | na
SKP2 | present | present |  |  |  |  |  |  |  |  | na | TCONS_00245215:2.77661 | na | na | na | na | na | XLOC_073994:-1.78601 | TCONS_00245213:-2.37181, TCONS_00245214:-2.30855, TCONS_00245215:2.22986, TCONS_00245216:-2.04728, TCONS_00260832:-1.21958 | na | na | na | na | na
SMURF1 |  |  |  |  |  |  | present |  |  |  | na | TCONS_00286419:-1.96876 | na | na | na | na | na | XLOC_086641:0.680993 | TCONS_00296205:1.00159 | na | na | na | na | na
SMURF2 |  |  |  |  |  |  | present |  |  |  | na | na | na | na | na | na | na | na | na | na | na | na | na | na
STUB1 |  |  |  |  |  |  |  |  |  |  | na | na | na | na | na | na | na | [NAME] | TCONS_00103553:-0.770068 | na | TSS30192:-0.770068 | na | na | na
SUGT1 | present |  |  |  |  |  |  |  |  |  | na | na | na | na | TSS23834:0.336125 | XLOC_023367:0.0301609 | na | na | na | na | na | TSS23832:0.0867659 | XLOC_023367:0.0291579 | na
TAP1 | present |  |  |  |  |  |  |  |  |  | na | na | na | na | na | na | na | XLOC_080790:1.43657 | TCONS_00266649:3.0062, TCONS_00266650:1.31888, TCONS_00266651:2.69078 | na | na | na | na | na
[NAME] | present |  |  |  |  |  |  |  |  |  | na | TCONS_00266637:1.95518 | na | na | na | na | na | na | TCONS_00266637:2.06535 | na | na | na | na | na
TCEB1 |  |  |  |  |  |  |  |  |  |  | na | na | na | na | TSS89912:0.177011 | na | na | na | TCONS_00304031:3.98559 | na | TSS89914:3.98559 | TSS89912:0.0834887 | XLOC_091460:0.267647 | na
TCEB2 |  |  |  |  |  |  |  |  |  |  | na | na | na | na | na | na | na | XLOC_032813:-0.785893 | TCONS_00105723:1.79769e+308, TCONS_00105724:-0.910513 | na | na | na | na | na
THIMET |  |  |  |  |  |  |  |  |  |  | na | na | na | na | na | na | na | na | na | na | na | na | na | na
TRAF6 |  |  |  |  |  |  |  |  |  |  | na | na | na | na | na | na | na | XLOC_014883:1.19173 | TCONS_00062079:1.76759 | na | na | na | na | na
TRIM69 | present |  |  |  |  |  |  |  |  |  | na | na | na | na | na | na | na | na | na | na | na | TSS28016:0.362772 | na | na
UBA1 |  |  |  |  |  |  |  |  |  |  | na | na | na | na | TSS99485:0.0729568 | XLOC_100739:0.0249569 | na | na | TCONS_00332933:-1.4684 | na | na | TSS99484:0.0368434, TSS99485:0.208949 | XLOC_100739:0.0980326 | na
UBB | present |  |  |  |  |  |  |  |  |  | XLOC_035835:-0.386274 | TCONS_00115918:-0.467069, TCONS_00115920:-0.250439 | na | TSS33564:-0.467069, TSS33565:-0.273055 | TSS33565:0.0331559 | XLOC_035835:0.0337253 | na | XLOC_035835:-0.721931 | TCONS_00115918:-0.888305, TCONS_00115919:-1.24848, TCONS_00115920:-0.470966 | na | TSS33564:-0.888305, TSS33565:-0.50717 | [NAME] | XLOC_035835:0.0666276 | na
UBC |  | present |  |  |  |  |  |  |  |  | na | TCONS_00066864:-0.177671 | na | TSS23235:-0.177671 | na | XLOC_020236:0.0276331 | na | na | [NAME] | na | TSS23235:-0.0803367 | na | XLOC_020236:0.0638534 | na
UBD | present |  |  |  |  |  |  |  |  |  | XLOC_080684:1.37496 | TCONS_00266024:1.48342 | na | na | na | na | na | XLOC_080684:3.36839 | TCONS_00266024:3.41719 | na | na | na | na | na
[NAME] |  |  |  |  |  |  |  |  |  |  | na | na | na | na | na | na | na | na | na | na | na | na | na | na
[NAME] | present | present |  |  |  |  |  |  |  |  | na | na | na | na | na | na | na | XLOC_074718:0.71063 | na | na | na | na | na | na
UBE2C | present |  |  |  |  |  |  |  |  |  | na | na | na | na | TSS52937:0.0220114 | XLOC_055500:0.0135103 | na | na | na | na | na | TSS52937:0.0505254 | XLOC_055500:0.0153888 | na
UBE2D1 | present |  |  |  |  |  |  |  |  |  | na | na | na | na | na | na | na | na | na | na | na | na | na | na
UBE2D2 |  |  |  |  |  |  |  |  |  |  | na | TCONS_00247839:-3.50063 | na | na | na | na | na | na | TCONS_00247839:-1.79769e+308 | na | na | na | na | na
UBE2D3 |  |  |  |  |  |  |  |  |  |  | na | na | na | na | na | na | na | na | na | na | na | na | na | na
UBE2D4 |  |  |  |  |  |  |  |  |  |  | na | na | na | na | na | na | na | na | na | na | na | na | na | na
UBE2E1 |  |  |  |  |  |  |  |  |  |  | na | TCONS_00204865:-3.25503, TCONS_00204869:2.07112 | na | na | na | na | na | na | TCONS_00204865:-2.80814, TCONS_00204869:2.16724 | na | na | na | na | na
UBE2E2 |  |  |  |  |  |  |  |  |  |  | na | na | na | na | na | na | na | na | na | na | na | na | na | na
UBE2E3 |  |  | present |  |  |  |  |  |  |  | na | na | na | na | na | na | na | XLOC_054201:-2.84801 | TCONS_00158110:-5.29562, TCONS_00168515:-2.84801 | na | na | na | na | na
UBE2F |  |  |  |  |  |  |  |  |  |  | na | na | na | na | na | na | na | na | na | na | na | na | na | na
UBE2G1 | present |  |  |  |  |  |  |  |  |  | na | na | na | na | na | na | na | na | na | na | na | na | na | na
UBE2G2 |  |  |  |  |  |  |  |  |  |  | na | na | na | na | na | na | na | XLOC_058581:-0.601153 | TCONS_00191824:1.52793, TCONS_00191825:1.66135 | na | na | na | na | na
UBE2H |  |  |  |  |  |  |  |  |  |  | na | TCONS_00287475:1.84063, TCONS_00295024:3.94484 | na | na | na | na | na | na | TCONS_00287475:1.95572, TCONS_00287476:1.79769e+308, TCONS_00293920:1.7819 | na | na | na | na | na
UBE2I |  |  |  |  | present | present |  |  |  | present | na | na | na | na | na | na | na | na | TCONS_00103607:1.5775 | na | na | na | na | na
UBE2J1 | present |  |  |  | present | present |  |  |  |  | na | na | na | na | na | na | na | na | na | na | na | na | na | na
UBE2J2 |  |  |  |  |  |  | present |  |  |  | na | na | na | na | na | na | na | na | na | na | na | na | na | na
UBE2L1 |  |  |  |  |  |  |  |  |  |  | na | na | na | na | na | na | na | na | na | na | na | na | na | na
UBE2L2 |  |  |  |  |  |  |  |  |  |  | na | na | na | na | na | na | na | na | na | na | na | na | na | na
UBE2L3 |  |  |  |  |  |  |  |  |  |  | na | na | na | na | na | na | na | na | na | na | na | na | na | na
UBE2L4 |  |  |  |  |  |  |  |  |  |  | na | na | na | na | na | na | na | na | na | na | na | na | na | na
UBE2L6 | present |  |  |  |  |  |  |  |  |  | na | na | na | na | na | XLOC_014993:0.0700078 | na | XLOC_014993:-1.12774 | TCONS_00050494:-0.995606, TCONS_00050495:-1.63813, TCONS_00062094:-1.49664 | na | TSS18413:-0.995606, TSS18414:-1.63813, TSS18415:-1.49664 | na | XLOC_014993:0.0813428 | na
UBE2M |  | present |  |  |  |  |  |  |  |  | na | na | na | na | na | na | na | na | na | na | na | na | na | na
UBE2N | present |  |  |  |  |  |  |  |  |  | na | na | na | na | na | XLOC_019974:0.0493842 | na | XLOC_019974:-0.661252 | TCONS_00066293:1.9095 | na | na | TSS22688:0.171832 | XLOC_019974:0.0505346 | na
UBE2Q1 |  |  |  |  |  |  |  |  |  |  | na | na | na | na | na | XLOC_004282:0.081227 | na | na | na | na | na | TSS9215:0.0326187 | XLOC_004282:0.0482245 | na
UBE2R2 | present |  |  |  |  |  |  |  |  |  | na | na | na | na | na | na | na | na | na | na | na | na | na | na
UBE2S | present |  |  |  |  |  | present |  |  |  | na | na | na | na | na | na | na | [NAME] | TCONS_00145269:-0.831626 | na | na | na | na | na
UBE2V1 |  |  |  |  |  |  |  |  |  |  | na | TCONS_00184010:-1.17826, TCONS_00184012:3.50724, TCONS_00188942:-2.75245, [NAME], TCONS_00185138:4.01165 | na | na | na | na | na | na | TCONS_00184010:-3.02655, TCONS_00184012:-1.79769e+308, TCONS_00188942:-4.60223, TCONS_00184009:2.79879, TCONS_00185138:5.63691 | na | na | na | na | na
UBE2V2 |  |  |  |  |  |  |  |  |  |  | na | na | na | na | na | na | na | na | TCONS_00307219:1.36729 | na | na | na | na | na
UBE3A | present |  |  |  | present |  |  |  |  |  | na | na | na | na | na | na | na | na | na | na | na | na | na | na
UBE3B |  |  |  |  |  |  |  |  |  |  | na | na | na | na | na | na | na | na | TCONS_00064308:2.30307 | na | na | na | na | na
UBE3C |  |  |  |  |  |  |  |  |  |  | na | na | na | na | na | na | na | na | na | na | na | na | na | na
UBR1 |  |  |  |  |  |  |  |  |  |  | na | TCONS_00095452:-2.18948 | na | na | na | na | na | na | TCONS_00100113:1.79769e+308, TCONS_00101752:1.79769e+308 | na | na | na | na | na
UBR2 | present |  |  |  |  |  |  |  |  |  | na | TCONS_00272696:2.33884, TCONS_00274174:1.54236 | na | na | na | na | na | XLOC_079478:1.14693 | TCONS_00263162:1.79769e+308, TCONS_00272696:2.75682, TCONS_00274174:2.52328, TCONS_00277095:1.79769e+308 | na | na | na | na | na
UCHL1 |  |  |  |  |  |  |  |  |  |  | na | TCONS_00229298:1.80409, TCONS_00229302:-2.28899 | na | na | TSS66971:0.179871, TSS66972:0.118381 | XLOC_068939:0.0382966 | na | na | TCONS_00229293:1.79769e+308, TCONS_00229302:-3.57275 | na | TSS66970:1.79769e+308, TSS66972:-1.02502 | TSS66971:0.157209, TSS66972:0.164273 | XLOC_068939:0.0523613 | na
UCHL3 | present |  |  |  |  |  |  |  |  |  | na | TCONS_00082826:2.85522 | na | na | na | na | na | XLOC_025055:2.38859 | TCONS_00078093:1.74283, TCONS_00082232:1.88552, TCONS_00082826:3.54227 | na | na | na | na | na
UCHL5 | present |  |  |  |  |  |  |  |  |  | na | na | na | na | na | na | na | na | TCONS_00015638:2.48011, TCONS_00015640:2.10137 | na | na | na | na | na
USO1 |  |  |  |  |  |  |  |  |  |  | na | na | na | na | na | na | na | XLOC_069207:0.896251 | TCONS_00230034:1.29889 | na | na | na | na | na
USP1 | present |  |  |  |  |  |  |  |  |  | na | na | na | na | na | na | na | na | TCONS_00003199:4.29043 | na | na | na | na | na
USP10 |  |  |  |  |  |  |  |  | present |  | na | TCONS_00109464:1.46608 | na | na | na | na | na | na | TCONS_00108075:1.79769e+308, TCONS_00109464:1.36672 | na | na | na | na | na
USP11 |  |  |  |  | present | present | present |  |  |  | na | TCONS_00340608:1.79769e+308 | na | na | TSS99499:0.115475 | XLOC_100740:0.0326845 | na | na | na | na | TSS99498:1.02845 | na | XLOC_100740:0.0523015 | na
USP12 |  |  |  |  |  |  |  |  |  |  | na | na | na | na | na | na | na | XLOC_023786:0.918233 | TCONS_00083038:1.41009, TCONS_00083872:2.29783 | na | na | na | na | na
USP13 |  |  |  |  |  |  |  |  |  |  | na | na | na | na | na | na | na | na | TCONS_00209298:-1.45005, TCONS_00222589:2.07781 | na | na | na | na | na
USP14 |  |  |  |  |  |  |  |  |  |  | na | na | na | na | na | na | na | na | na | na | na | na | na | na
USP15 | present |  |  |  |  |  |  |  |  |  | na | na | na | na | na | na | na | na | TCONS_00063724:-1.73979 | na | na | na | na | na
USP16 |  |  |  |  | present | present |  |  |  |  | na | na | na | na | na | na | na | XLOC_058015:1.0878 | TCONS_00189914:2.44179, TCONS_00192261:1.51399, TCONS_00193824:2.28066, TCONS_00194323:2.74046 | na | na | na | na | na
USP17 |  |  |  |  |  |  |  |  |  |  | na | na | na | na | na | na | na | na | na | na | na | na | na | na
USP18 | present |  |  |  |  |  |  |  |  |  | na | na | na | na | na | na | na | XLOC_060591:-2.87257 | TCONS_00199101:-2.87257, TCONS_00199639:-1.50047 | na | na | na | na | na
USP19 |  |  |  |  |  |  |  |  |  |  | na | TCONS_00211865:3.50134 | na | na | na | na | na | na | na | na | na | na | na | na
USP2 |  |  |  |  |  | present |  |  |  |  | na | na | na | na | na | na | na | na | TCONS_00051831:1.99242 | na | na | na | na | na
USP20 |  |  |  |  |  |  |  |  |  |  | na | TCONS_00312052:2.65837 | na | na | TSS92418:0.196335, TSS92421:0.124085 | XLOC_094966:0.0679308 | na | na | TCONS_00321365:2.15548 | na | TSS92420:2.15548 | TSS92418:0.127613, TSS92421:0.148027 | XLOC_094966:0.149204 | na
USP21 |  |  |  |  |  | present |  |  |  |  | na | na | na | na | na | na | na | na | na | na | na | na | na | na
USP22 |  |  |  |  |  |  |  |  |  |  | na | na | na | na | na | na | na | na | na | na | na | na | na | na
USP24 |  |  |  |  |  |  |  |  |  |  | na | na | na | na | na | na | na | na | na | na | na | na | na | na
USP25 | present |  |  |  |  |  |  |  |  |  | na | na | na | na | na | na | na | XLOC_057947:1.06694 | TCONS_00189767:1.96106, TCONS_00193563:1.23922 | na | na | na | na | na
USP26 |  |  |  |  |  |  |  |  |  |  | na | na | na | na | na | na | na | na | na | na | na | na | na | na
USP27X |  |  |  |  |  |  |  |  |  |  | na | na | na | na | na | na | na | na | TCONS_00342142:-2.58688 | na | na | na | na | na
USP28 |  |  |  |  |  |  |  |  |  |  | na | TCONS_00051672:-1.80849, TCONS_00053991:-2.88144 | na | na | na | na | na | na | TCONS_00053991:-2.93397, [NAME] | na | na | na | na | na
USP29 |  |  |  |  |  |  |  |  |  |  | na | na | na | na | na | na | na | na | na | na | na | na | na | na
USP3 |  |  |  |  |  |  |  |  |  |  | na | na | na | na | na | na | na | na | TCONS_00098512:2.07447 | na | na | na | na | na
USP30 |  |  |  |  |  |  |  |  |  |  | na | TCONS_00172400:1.26125 | na | na | na | na | na | na | TCONS_00064286:1.79769e+308, TCONS_00069981:2.01609 | na | na | na | na | na
USP31 |  |  |  |  |  |  |  |  |  |  | na | na | na | na | na | na | na | na | TCONS_00113473:1.50438 | na | na | na | na | na
USP32 | present |  |  |  |  |  |  |  |  |  | na | na | na | na | na | na | na | XLOC_037535:0.894346 | TCONS_00120605:-1.36774, TCONS_00123010:1.19406, TCONS_00129790:0.917739 | na | na | na | na | na
USP33 |  |  |  |  |  |  |  |  |  |  | na | na | na | na | na | na | na | na | TCONS_00022415:-2.05331, TCONS_00022416:2.21188 | na | na | na | na | na
USP34 |  |  |  |  |  |  |  |  |  |  | na | TCONS_00172400:1.26125, TCONS_00178698:-2.93509 | na | na | na | na | na | XLOC_049702:0.660626 | TCONS_00162295:1.02368, TCONS_00172400:1.10864 | na | na | na | na | na
USP35 |  |  |  |  |  |  |  |  |  |  | na | na | na | na | na | na | na | na | na | na | na | na | na | na
USP36 |  |  |  |  |  |  |  |  |  |  | na | na | na | na | na | na | na | XLOC_037735:0.781561 | TCONS_00121086:-1.79769e+308, TCONS_00121088:1.23481, TCONS_00126574:0.97993, TCONS_00128962:2.1193 | na | na | na | na | na
USP37 |  |  |  |  |  |  |  |  |  |  | na | na | na | na | na | na | na | na | na | na | na | na | na | na
USP38 |  |  |  |  |  |  |  |  |  |  | na | TCONS_00243463:2.72595 | na | na | na | na | na | na | TCONS_00231310:1.59322, TCONS_00243463:2.48078 | na | na | na | na | na
USP39 | present | present |  |  |  | present |  |  |  |  | na | na | na | na | na | na | na | na | TCONS_00155617:1.79769e+308, TCONS_00155624:1.79769e+308 | na | na | na | na | na
USP4 |  |  |  |  |  |  |  |  |  |  | na | na | na | na | na | na | na | na | TCONS_00211912:2.45201 | na | na | na | na | na
USP40 | present |  |  |  |  |  |  |  |  |  | na | na | na | na | na | na | na | na | TCONS_00166933:1.61437, TCONS_00166934:-1.94063, TCONS_00166945:-1.79769e+308, TCONS_00166946:2.38722, TCONS_00166948:-1.79769e+308 | na | na | na | na | na
USP41 | present |  |  |  |  |  |  |  |  |  | na | TCONS_00197121:-0.272214 | na | TSS57691:-0.272214 | na | [NAME] | na | na | TCONS_00197121:0.313711 | na | TSS57691:0.313711 | na | na | na
USP42 |  |  |  |  |  |  | present |  |  |  | na | TCONS_00278782:-1.60334, TCONS_00289767:2.10364, TCONS_00289769:4.23961 | na | na | na | na | na | na | na | na | na | na | na | na
USP43 |  |  |  |  |  |  | present |  |  |  | na | na | na | na | na | na | na | na | na | na | na | TSS33482:0.350863 | na | na
USP44 |  |  |  |  |  |  |  |  |  |  | na | na | na | na | na | na | na | na | na | na | na | na | na | na
USP45 |  | present |  |  |  |  |  |  |  |  | na | na | na | na | na | na | na | na | TCONS_00268072:-1.79769e+308, TCONS_00268074:2.21851, TCONS_00268075:1.79769e+308, TCONS_00271115:-1.79769e+308 | na | na | na | na | na
USP46 |  |  |  |  |  |  |  |  |  |  | na | na | na | na | na | na | na | na | na | na | na | na | na | na
USP47 |  |  |  |  |  |  |  |  |  |  | na | TCONS_00047302:1.6812 | na | na | na | na | na | XLOC_013587:0.764095 | TCONS_00047303:0.870348, TCONS_00047304:-1.79769e+308 | na | na | na | na | na
USP48 |  |  |  |  |  |  |  |  |  |  | na | na | na | na | na | na | na | na | na | na | na | na | na | na
USP49 |  |  |  |  |  |  |  |  |  |  | na | na | na | na | na | na | na | na | TCONS_00267124:-1.79769e+308 | na | na | na | na | na
USP5 |  |  |  |  |  |  |  |  |  |  | na | na | na | na | na | XLOC_018388:0.043357 | XLOC_018388:0.0448517 | na | na | na | na | na | XLOC_018388:0.0361517 | XLOC_018388:0.0361517
USP50 |  |  |  |  |  |  |  |  |  |  | na | na | na | na | na | na | na | na | na | na | na | na | na | na
USP51 |  | present |  |  |  |  | present |  |  |  | na | na | na | na | na | na | na | na | na | na | na | na | na | na
USP53 |  |  |  |  |  |  |  |  |  |  | XLOC_073144:1.8442 | TCONS_00230953:-2.04869, TCONS_00238978:1.5718, TCONS_00241913:-3.00236, TCONS_00243189:1.8442, TCONS_00243443:1.79769e+308, TCONS_00244021:-2.86777 | na | na | na | na | na | XLOC_069487:1.2856, XLOC_073144:3.68904 | TCONS_00230957:2.93505, TCONS_00238978:4.32354, TCONS_00239482:2.46603, TCONS_00240785:1.98676, TCONS_00241913:-3.29344, TCONS_00241914:-1.79769e+308, TCONS_00242701:1.65742, TCONS_00243189:3.68904, TCONS_00243443:1.79769e+308 | na | na | na | na | na
USP54 |  |  |  |  |  |  |  |  |  |  | na | TCONS_00038609:1.79769e+308, TCONS_00038610:1.79769e+308, TCONS_00042300:-1.44188 | na | na | na | na | na | XLOC_011179:0.466693 | TCONS_00038608:-1.79769e+308, [NAME], TCONS_00043759:1.84903, TCONS_00044602:1.8363, TCONS_00044603:1.15397, TCONS_00045931:1.44967 | na | na | na | na | na
USP6 |  |  |  |  | present | present |  |  |  |  | na | na | na | na | na | na | na | na | na | na | na | na | na | na
USP7 | present |  |  |  |  |  |  |  |  |  | na | TCONS_00105868:3.48795 | na | na | na | na | na | na | TCONS_00105868:2.37453, TCONS_00114259:-1.79769e+308 | na | na | na | na | na
USP8 |  |  |  |  |  |  |  |  |  |  | na | na | na | na | na | na | na | na | na | na | na | na | na | na
USP9X |  |  |  |  |  |  |  |  |  |  | na | TCONS_00332834:2.1255, TCONS_00339896:2.37383 | na | TSS99406:2.37383, TSS99411:2.1255 | na | XLOC_100698:0.133591 | na | XLOC_100698:0.860111, XLOC_103130:1.37566 | TCONS_00332826:1.12187, TCONS_00332831:1.79769e+308, TCONS_00332834:2.43496, TCONS_00339896:3.41793, TCONS_00341500:1.37566 | na | TSS99402:0.997314, TSS99406:3.41793, TSS99407:1.79769e+308, TSS99408:0.827654, TSS99411:2.43496 | TSS99402:0.0556704 | XLOC_100698:0.132749 | na
USP9Y |  |  |  |  |  |  |  |  |  |  | XLOC_103890:1.69671 | na | na | na | na | XLOC_103890:0.260206 | na | na | na | na | na | na | na | na
VHL |  |  |  |  |  |  |  |  |  |  | na | na | na | TSS59058:-0.768913 | TSS59058:0.0761207 | XLOC_062023:0.195438 | na | na | na | na | na | TSS59058:0.0525794 | XLOC_062023:0.0647784 | na
XIAP |  |  |  |  |  |  |  |  |  |  | na | TCONS_00334514:1.70939 | na | na | na | na | na | XLOC_101382:0.842573 | TCONS_00334514:2.02893, TCONS_00334518:1.0274 | na | na | na | na | na
References
10. [NAME], Ng A, Sukumaran B, Gilfoy FD, Uchil PD, et [NAME]. (2008) RNA interference screen for human genes associated with West Nile virus infection. Nature 455: 242-245.
11. Sessions OM, [NAME], [NAME], Robinson TJ, Hershey CL, et [NAME]. (2009) Discovery of insect and human dengue virus host factors. Nature 458: 1047-1050.
12. [NAME], Kennel A, Deauvieau F, [NAME] R, Arnaud-Barbe N, et [NAME]. (2011) Different innate signatures induced in human monocyte-derived dendritic cells by wild-type dengue 3 virus, attenuated but reactogenic dengue 3 vaccine virus, or attenuated nonreactogenic dengue 1-4 vaccine virus strains. The Journal of infectious diseases 203: 103-108.
13. Becerra A, [NAME], [NAME], Xhaja K, de Bosch N, et [NAME]. (2009) Gene expression profiling of dengue infected human primary cells identifies secreted mediators in vivo. Journal of medical virology 81: 1403-1411.
14. [NAME], El-Bacha T, [NAME], Coello G, [NAME], et [NAME]. (2010) Gene expression analysis during dengue virus infection in HepG2 cells reveals virus control of innate immune response. The Journal of infection 60: 65-75.
15. Fink J, Gu F, [NAME], Tolfvenstam T, [NAME], et [NAME]. (2007) Host gene expression profiling of dengue virus infection in cell lines and patients. [NAME] Negl Trop Dis 1: e86.
16. [NAME], [NAME], [NAME], [NAME], [NAME], et [NAME]. (2010) The early whole-blood transcriptional signature of dengue virus and features associated with progression to dengue shock syndrome in Vietnamese children and young adults. Journal of virology 84: 12982-12994.
17. [NAME], Chow VT (2006) [NAME] and real-time RT-PCR analyses of a novel set of differentially expressed human genes in ECV304 endothelial-like cells infected with dengue virus type 2. Journal of virological methods 131: 47-57.
18. Loke P, [NAME], [NAME], [NAME], Batra S, et [NAME]. (2010) Gene expression patterns of dengue virus-infected children from nicaragua reveal a distinct signature of increased metabolism. [NAME] Negl Trop Dis 4: e710.
19. Long HT, [NAME], [NAME], [NAME], [NAME] T, et [NAME]. (2009) Patterns of gene transcript abundance in the blood of children with severe or uncomplicated dengue highlight differences in disease evolution and host response to dengue virus infection. J Infect Dis 199: 537-546.
20. [NAME], Romano M, Legorreta-Herrera M, Sanchez-Garcia FJ, [NAME] (2004) Gene expression in human macrophages infected with dengue virus serotype-2. Scandinavian journal of immunology 60: 631-638.
21. Nascimento EJ, [NAME] Calzavara-Silva CE, [NAME], Abath FG, et [NAME]. (2009) Gene expression profiling during early acute febrile stage of dengue infection can predict the disease outcome. PloS one 4: e7892.
22. Nasirudeen AM, [NAME] (2009) Gene expression profiling by microarray analysis reveals an important role for caspase-1 in dengue virus-induced p53-mediated apoptosis. Journal of medical virology 81: 1069-1081.
23. [NAME], [NAME], Delfraro A, [NAME], Coluchi N, et [NAME]. (2011) Dengue virus type 3 isolated from a fatal case with visceral complications induces enhanced proinflammatory responses and apoptosis of human dendritic cells. Journal of virology 85: 5374-5383.
24. [NAME], Popper S, Dolocek C, Chau TN, [NAME], et [NAME]. (2007) Patterns of host genome-wide gene transcript abundance in the peripheral blood of patients with acute dengue hemorrhagic fever. J Infect Dis 195: 1097-1107.
25. [NAME] T, [NAME], [NAME], [NAME], Chow A, et [NAME]. (2011) Characterization of early host responses in adults with dengue disease. BMC infectious diseases 11: 209.
26. [NAME], Masrinoul P, [NAME], Kalayanarooj S, Charoensirisuthikul T, et [NAME]. (2008) Differences in global gene expression in peripheral blood mononuclear cells indicate a significant role of the innate responses in progression of dengue fever but not dengue hemorrhagic fever. J Infect Dis 197: 1459-1467.
27. Umareddy I, Pluquet O, [NAME], [NAME], Chevet E, et [NAME]. (2007) Dengue virus serotype infection specifies the activation of the unfolded protein response. [NAME] 91.
28. [NAME], [NAME], [NAME], Santoro AB, Da Poian AT, et [NAME]. (2009) Dengue virus-induced regulation of the host cell translational machinery. Brazilian journal of medical and biological research : [NAME] / Sociedade [NAME]  [et al] 42: 1020-1026.
29. [NAME], [NAME], [NAME], [NAME], Shaw SK, et [NAME]. (2003) Dengue virus induces novel changes in gene expression of human umbilical vein endothelial cells. J [NAME] 77: 11822-11832.
44. Jamison SF (Unpublished) DENV Screen Human.
45. Le Breton M, Meyniel-Schicklin L, Deloire A, Coutard B, Canard B, et [NAME]. (2011) Flavivirus NS3 and NS5 proteins interaction network: a high-throughput yeast two-hybrid screen. BMC Microbiol 11: 234.
46. [NAME], [NAME], N.J., [NAME], M.A. (Unpublished) YFV Screen.
47. [NAME], [NAME], Ng A, Hu Z, [NAME], et [NAME]. (2009) A genome-wide genetic screen for host factors required for hepatitis C virus propagation. Proceedings of the National Academy of Sciences of the United States of America 106: 16410-16415.
48. [NAME], Benita Y, [NAME], [NAME], Sakamoto N, et [NAME]. (2009) A functional genomic screen identifies cellular cofactors of hepatitis C virus replication. Cell host & microbe 5: 298-307.
49. Ward AM, [NAME], [NAME], [NAME], [NAME], et [NAME]. (2011) Quantitative mass spectrometry of DENV-2 RNA-interacting proteins reveals that the DEAD-box RNA helicase [NAME] binds the DB1 and DB2 3' UTR structures. RNA Biol 8: 1173-1186.